ORF STATUS Function Best COG Functional category Pathways and functional systems
r_klactVI4626 good A KOG1104 RNA processing and modification Nuclear cap-binding complex, subunit NCBP1/CBP80
Only best alignment is shown:
BLASTP 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= r_klactVI4626 1609023 1606459 -855
(855 letters)
Database: KOG eukaryal database 04/03
60,738 sequences; 30,389,216 total letters
Searching..................................................done
Color Key for Alignment Scores: 
Score E
Sequences producing significant alignments: (bits) Value
YMR125w [A] KOG1104 Nuclear cap-binding complex subunit NCBP1/CBP80 949 0.0
SPAC6G10.07 [A] KOG1104 Nuclear cap-binding complex subunit NCBP... 141 4e-33
At2g13540 [A] KOG1104 Nuclear cap-binding complex subunit NCBP1/... 91 8e-18
7290517 [A] KOG1104 Nuclear cap-binding complex subunit NCBP1/CBP80 82 5e-15
7300747 [A] KOG1104 Nuclear cap-binding complex subunit NCBP1/CBP80 79 2e-14
Hs4505343 [A] KOG1104 Nuclear cap-binding complex subunit NCBP1/... 75 3e-13
CE28726 [A] KOG1104 Nuclear cap-binding complex subunit NCBP1/CBP80 61 6e-09
>YMR125w [A] KOG1104 Nuclear cap-binding complex subunit NCBP1/CBP80
Length = 861
Score = 949 bits (2454), Expect = 0.0
Identities = 456/854 (53%), Positives = 625/854 (72%), Gaps = 4/854 (0%)
Query: 5 DYEEESGYREARPHFAKRQRLPPVVMLCKDMMPDIRTMGESAKAFPEDIKFLSEAIVHEF 64
D++E+ YR+ RP KRQR+PPVV LCK+MMPDIRT+GES KAF +DIKFLSEAI++E+
Sbjct: 9 DFDEDENYRDFRPRMPKRQRIPPVVQLCKEMMPDIRTIGESVKAFEDDIKFLSEAIMNEY 68
Query: 65 GNDEYFNNALLKTFRAVILEQPHKQPGIALLTMVLNSAKPEIGKSILNYFFDQIQELLNS 124
G+++YFNNALL T AV++EQP KQ IALLTMV+NS GKSI+NYFF+++Q+
Sbjct: 69 GHEDYFNNALLSTLNAVVVEQPQKQAAIALLTMVVNSKNNVAGKSIINYFFEELQKWCKQ 128
Query: 125 SHDPDYQTKSHDIGPWDKIKLVLRFISILSPMVVPXXXXXXXXXXXQFTVDLNN-STEKR 183
+++ ++++ S++ GPW+KIKL+LRF+SILSPM + + +++LNN R
Sbjct: 129 TYNDEFKSTSNETGPWNKIKLILRFLSILSPMFLVDELINIYKSLFELSIELNNLDPGNR 188
Query: 184 SPLSEAIYTNTLLNVPYLFYFNSDNRESLKTLVEELLTFVENEYNIKDTDIQLLKAYNKN 243
PLSEAIYTNTLLN+PYLF+FN +N + L+T VEELL +VE Y +K TDI LL+ YN
Sbjct: 189 VPLSEAIYTNTLLNIPYLFFFNRNN-DGLRTKVEELLAYVEQNYLVKTTDINLLREYNGE 247
Query: 244 PPYEPVHWVTAVLPNVKNALANDMQQLGELFLNYDTLLTQQIAIHSFNEPLNLPTLEQII 303
PPYE V V VLPNVK AL N+++QL ELF +++ LLT Q FN+ L LP+++ +
Sbjct: 248 PPYEMVELVRVVLPNVKKALINNLEQLNELFPDWNHLLTPQTGDEGFNDALTLPSVDDLK 307
Query: 304 PFSGLDKGFGSVDSLWKTPRYSFEVYLPNSVGPFSTVIPTTTFTGMLFQDILLDIIESME 363
F L+K FGSVDS+WKTPRY+F VYLPNS G F TV+P +T+ G LF DI++D++ES+E
Sbjct: 308 SFVRLNKNFGSVDSMWKTPRYAFHVYLPNSAGNFETVVPISTYAGQLFNDIIIDLVESLE 367
Query: 364 FNRLEVARQLVTIDLFFTAGIFTEPGLPVAQLLEQFEENPARSTFKIEDLAVGAILELTF 423
FNR EVARQ++T+DLFF AGIFTEPG +AQL+ +EENP TFKIEDLA+ IL L F
Sbjct: 368 FNRKEVARQVITLDLFFKAGIFTEPGESIAQLIATYEENPLAPTFKIEDLAIETILGLIF 427
Query: 424 KLPTVSQSFAYFYSLLVEICKNSPKAIAPVFGRAFRYFYNNLDKLDFELKARFLDWFSIQ 483
KLP+VSQ FAYFY+LLV+IC+NSPKAIAPVFGRAFR+FY++LD LDFELK R+LDWFSIQ
Sbjct: 428 KLPSVSQPFAYFYTLLVDICQNSPKAIAPVFGRAFRFFYSHLDSLDFELKLRYLDWFSIQ 487
Query: 484 MSNFNFSWKWNEWEVDSIQWNRTIYNPRMIFIKNLIRKELRLTSNSADVEESVTDEFQKF 543
MSNFNFSWKWNEWE DSI++ + YNP++ F KNLI+KELRLTSN ++VE+S+ EF K+
Sbjct: 488 MSNFNFSWKWNEWEDDSIKFGKYFYNPKVNFAKNLIQKELRLTSNFSEVEDSLPQEFTKY 547
Query: 544 MDPSFIKREDLVNYYSSLFKDFQLDEGDLRNNELYFRSPSFPFHENVTQLLDFFHKQPDT 603
+D S+I R+ L+NYY SLF + ++E +R N+LYFR P V ++LD+ HK ++
Sbjct: 548 LDTSYIPRDQLINYYQSLFTGYTVEEDSVRKNDLYFRQEGVPMENTVRKILDYTHKANNS 607
Query: 604 RSVAELEGILKDIAVNHGSIIEDFNRFTVTLLIQTIVFCGSRSLSHANKYIDDSREELKA 663
R V ELE IL ++ +GSII DFNRF + LL+Q + GSRSLSHANKYI+D +E+LK
Sbjct: 608 REVTELESILGELKNEYGSIISDFNRFVIILLVQAVTDSGSRSLSHANKYINDLKEDLKT 667
Query: 664 IMAQVEVSPQIKDQWICEAVVRYWNSNSQTGYLILDSLRYNGLISNESVLNFSLTEQCGV 723
I A++E+ + K+ I EAV+ +WN+N QTG+L+ D+ +Y GL+++ ++ F E
Sbjct: 668 IFAKIELDIETKEYIIIEAVLTFWNANPQTGFLVADAFKYAGLLTSRTIFTFIFNETGLK 727
Query: 724 NMSLVDSTSIESIFRILNELAMAADKDVGSFEYVFNRLVGAANEVLSQL--NTIDPIVVP 781
N L+++T+IE++FR L++ ++ +FE+VF RL AN + L N + I +P
Sbjct: 728 NNGLIEATAIEAVFRNLSQQISEENESGNNFEFVFERLCTIANSTIDLLDVNADEDIEIP 787
Query: 782 DLDQDIQATDEELPSLDLAWKYEAIMGFLKSVLRKYSDEFSVLTEKFINDVLQGVPHEPT 841
++ ++ D E LDL WKY ++GF+KS+LR+YS E+ L +KFI ++ +PHE T
Sbjct: 788 KVNGEMDIDDIEDDKLDLKWKYFTVIGFIKSILRRYSHEYRELADKFIANIDNAIPHEST 847
Query: 842 KQQLNRWISEVSEL 855
++ ++ WI E E+
Sbjct: 848 RRTISNWIQETKEV 861
>SPAC6G10.07 [A] KOG1104 Nuclear cap-binding complex subunit NCBP1/CBP80
Length = 780
Score = 141 bits (356), Expect = 4e-33
Identities = 110/441 (24%), Positives = 200/441 (44%), Gaps = 72/441 (16%)
Query: 350 LFQDILLDIIESMEFNRLEVARQLVTIDLFFTAGIFTEPGLPVAQLLEQFEENPARSTFK 409
+F+DI +D+I +EFNR+E A+ L +D++FT F G PV +L +P+ S +K
Sbjct: 318 IFRDISVDVINHLEFNRVEAAQVLTDLDVYFTYKTFALRGTPVNELPNL---DPSESRWK 374
Query: 410 IEDLAVGAILELTFKLPTVSQSFAYFYSLLVEICKNSPKAIAPVFGRAFRYFYNNLDKLD 469
ED+ V A+L + Y++SLL+E C+ +PK +AP FGR R Y L
Sbjct: 375 AEDIIVEAVLGELLGSQNTTYKPVYYHSLLIECCRIAPKILAPTFGRVIRLMYTMSSDLP 434
Query: 470 FELKARFLDWFSIQMSNFNFSWKWNEW----EVDSIQWNRTIYNPRMIFIKNLIRKELRL 525
+ RF+DWFS +SNFNF WKWNEW E+D + +P+ +F++ I +EL +
Sbjct: 435 LQTLDRFIDWFSHHLSNFNFHWKWNEWIPDVELDDL-------HPKKVFMRETITREL-I 486
Query: 526 TSNSADVEESVTDEFQKFM-----DPSFIKREDLVNYYSSLFKDFQLDEGDLRNNELYFR 580
S + +S+ +E + + P+F+ +
Sbjct: 487 LSYYTRISDSLPEELRCLLGEQPSGPNFV-----------------------------YE 517
Query: 581 SPSFPFHENVTQLLDFFHKQPDTRSVAELEGILKDIAVNHGSIIEDFNRFTVTLLIQTIV 640
+ + P ++ +Q+++ + + EL+ IL+ I++ V L++
Sbjct: 518 NETHPLYQQSSQIIEALRLH---KPLEELDIILQ------SEEIQNSETSAVRLVMSCAY 568
Query: 641 FCGSRSLSHANKYIDDSREELKAIMAQVEVSPQIKDQWICEAVVRYWNSNSQTGYLILDS 700
GSRS SHA + LK ++ + +I+ + + + +W + LD
Sbjct: 569 SLGSRSFSHALNVFEKHLNTLKH-FSRKSLDSEIE---VVDELFSFWKLQPFNAVMWLDK 624
Query: 701 LRYNGLISNESVLNFSLTEQCGV-----NMSLVDSTSIESIFRILNELAMAADKDV---- 751
+ +IS S++ + + + + SLV++T + R+ ++ D +
Sbjct: 625 MLNYSIISITSIIEWLIKQDVTIWSRSYTWSLVNTTFNKLAARLRRSVSNKEDSSLINEA 684
Query: 752 -GSFEYVFNRLVGAANEVLSQ 771
E V N L+ A ++S+
Sbjct: 685 NEEKEIVTNLLLSALRALISE 705
>At2g13540 [A] KOG1104 Nuclear cap-binding complex subunit NCBP1/CBP80
Length = 749
Score = 90.9 bits (224), Expect = 8e-18
Identities = 129/643 (20%), Positives = 252/643 (39%), Gaps = 100/643 (15%)
Query: 86 PHKQPGIALLTMVLNSAKPEIGKSILNYFFDQIQELLNSSHDPDYQTKSHDIGPWDKIKL 145
PHK P L +LN D +Q+L+ S H ++Q + D G + I++
Sbjct: 58 PHKIPLYGTLIGLLNLENE-----------DFVQKLVESVH-ANFQV-ALDSGNCNSIRI 104
Query: 146 VLRFISIL--SPMVVPXXXXX---XXXXXXQFTVDLNNSTEKRSPLSEAIYTNTLLNVPY 200
+LRF++ L S ++ P TVD P ++ L ++P+
Sbjct: 105 LLRFMTSLLCSKVIQPASLIVVFETLLSSAATTVDEEKGNPSWQPQADFYVICILSSLPW 164
Query: 201 LFYFNSDNRESLKTLVEELLTFVENEYNIKDTDIQLLKAYNKNPPYEPV----HWVTAVL 256
S+ E + +E +L ++ +I+ + N +E +V +L
Sbjct: 165 ---GGSELAEQVPDEIERVLVGIQAYLSIRKNSSTSGLNFFHNGEFESSLAEKDFVEDLL 221
Query: 257 PNVKNALAND--MQQLGELFLNYDTLLTQQIAIHSFNEPLNLPTLEQIIPFSGLDKGFGS 314
+++ +N ++ + L+++ Q+ F+E + +EQ P S + +
Sbjct: 222 DRIQSLASNGWKLESVPRPHLSFEA----QLVAGKFHELRPIKCMEQPSPPSDHSRAYSG 277
Query: 315 VDSLWKTPRYSFEVYLPNSVGPFSTVIPTTTFTGMLFQDILLDIIESMEFNRLEVARQLV 374
RY + N + P + + + ++ LLD++ + R E A +
Sbjct: 278 KQKHDALTRYPQRIRRLN-IFPANKMEDVQPIDRFVVEEYLLDVLFYLNGCRKECASYMA 336
Query: 375 TIDLFFTAGIFTEPGLPVAQLLEQFEENPARSTFKIEDLAVGAILELTFKLPTVSQSFAY 434
LPV TF+ E L + LP Y
Sbjct: 337 N--------------LPV--------------TFRYEYLMAETLFSQILLLPQPPFKTLY 368
Query: 435 FYSLLVEICKNSPKAIAPVFGRAFRYFYNNLDKLDFELKARFLDWFSIQMSNFNFSWKWN 494
+ +++++CK P A V A R + + LD E + R + WFS +SNF F W W
Sbjct: 369 YTLVIMDLCKALPGAFPAVVAGAVRALFEKISDLDMESRTRLILWFSHHLSNFQFIWPWE 428
Query: 495 EWE--VDSIQWNRTIYNPRMIFIKNLIRKELRLTSNSADVEESVTDEFQKFMDPSFIKRE 552
EW +D +W P+ +F++ ++++E+RL S D+ ++ ++ + E
Sbjct: 429 EWAFVLDLPKW-----APKRVFVQEILQREVRL---------SYWDKIKQSIENATALEE 474
Query: 553 DLVNYYSSLFKDFQLDEGDLRNNELYFRSPSFPFHENVTQLLDFFHKQPDTRSVAELEGI 612
L F + L+EG + E + S V + KQ + +E
Sbjct: 475 LLPPKAGPNFM-YSLEEGKEKTEE---QQLSAELSRKVKE------KQTARDMIVWIEET 524
Query: 613 LKDIAVNHGSIIEDFNRFTVTLLIQTIVFCGSRSLSHANKYIDDSREELKAIMAQVEVSP 672
+ + HG + T+T+++QT++ GS+S +H ++ + + +
Sbjct: 525 IYPV---HGFEV------TLTIVVQTLLDIGSKSFTHLVTVLERYGQVFSKLCPDND--- 572
Query: 673 QIKDQWICEAVVRYWNSNSQTGYLILDSLRYNGLISNESVLNF 715
K + V YW +N Q + +D + L+SN++++ +
Sbjct: 573 --KQVMLLSQVSTYWKNNVQMTAVAIDRMMGYRLVSNQAIVRW 613
>7290517 [A] KOG1104 Nuclear cap-binding complex subunit NCBP1/CBP80
Length = 800
Score = 81.6 bits (200), Expect = 5e-15
Identities = 75/304 (24%), Positives = 126/304 (40%), Gaps = 40/304 (13%)
Query: 403 PARSTFKIEDLAVGAILELTFKLPTVSQSFAYFYSLLVEICKNSPKAIAPVFGRAFRYFY 462
P + +E V + F +PT + S+L+E+CK P + V +A +
Sbjct: 343 PYKHKIPLEYCIVEVVFAELFHMPTPRYLDICYGSILIELCKLQPATLPQVLAQATEILF 402
Query: 463 NNLDKLDFELKARFLDWFSIQMSNFNFSWKWNEWEVDSIQWNRTIYNPRMIFIKNLIRKE 522
+D ++ RF++WFS +SNF F+W W+EW+ + +PR FI+ +++K
Sbjct: 403 MRIDSMNTSCFDRFVNWFSYHLSNFKFTWSWDEWDSCLLLDGE---HPRPKFIQEVLQKC 459
Query: 523 LRLTSNSADVEESVTDEFQKFMDPSFIKREDLVNYYSSLFKDFQLDEGDLRNNELYFRSP 582
LRL+ + E T Y+ L + N E
Sbjct: 460 LRLSYHQRITEMMPTT-------------------YAKLIPLTPVPNYKYANEEAANLPG 500
Query: 583 SFPFHENVTQLLDFFHKQPDTRSVAELEGILKDIAVNHGSIIED-----FNRFTVTLLIQ 637
+ H+ V + +Q T E+ ILKDI N G E+ FN + + +Q
Sbjct: 501 TTVAHQLVVAI-----RQKCTPE--EVVNILKDIP-NSGYSGEEMSDGSFNALKIDVFVQ 552
Query: 638 TIVFCGSRSLSHANKYIDDSREELKAIMAQVEVSPQIKDQWICEAVVRYWNSNSQTGYLI 697
T++ GS+S SH+ I +A+ E QI I + W+S+ Q ++
Sbjct: 553 TLLNLGSKSFSHSFAAISKFHSVFRALAETEEA--QI---CILHNIFELWSSHQQMMVVL 607
Query: 698 LDSL 701
+D L
Sbjct: 608 IDKL 611
>7300747 [A] KOG1104 Nuclear cap-binding complex subunit NCBP1/CBP80
Length = 747
Score = 79.3 bits (194), Expect = 2e-14
Identities = 64/247 (25%), Positives = 107/247 (42%), Gaps = 31/247 (12%)
Query: 289 SFNEPLNLPTLEQIIPFSGLDKGFGSVDSLWKTPRYSFEVYLPNSVGPFSTVIPTTTFTG 348
SF+E L+ + Q+ + D + PR F ++ +SVG + P +
Sbjct: 261 SFSETLSHGRIHQLRDY---DLAAHEERCRYPLPRVCFRIFSCDSVGEIPNMPPPVSIER 317
Query: 349 MLFQDILLDIIESMEFNRLEVARQLVTIDLFFTAGIFTEPGLPVAQLLEQFEENPARSTF 408
L + +LDI+ S R A L L + A ++P LPV +
Sbjct: 318 HLLEAHILDILISFHKERKICADSL----LMYAA---SKPQLPVYYCI------------ 358
Query: 409 KIEDLAVGAILELTFKLPTVSQSFAYFYSLLVEICKNSPKAIAPVFGRAFRYFYNNLDKL 468
V IL +LPT + S + S+LVE+CK P I V +A YN L+ +
Sbjct: 359 ------VEVILGEMLRLPTANWSTIAYGSILVELCKRQPDKIPQVVAQALDIIYNRLNSM 412
Query: 469 DFELKARFLDWFSIQMSNFNFSWKWNEWE---VDSIQWNRTIYNPRMIFIKNLIRKELRL 525
R ++W S +SNF F+ +W++W I + T P+++F++ L++K R+
Sbjct: 413 SVACFDRLVNWVSHHISNFGFNCQWSKWAQGLPSPIDPSATNLQPKVVFLRELLKKCFRI 472
Query: 526 TSNSADV 532
D+
Sbjct: 473 KDVVPDI 479
>Hs4505343 [A] KOG1104 Nuclear cap-binding complex subunit NCBP1/CBP80
Length = 790
Score = 75.5 bits (184), Expect = 3e-13
Identities = 91/444 (20%), Positives = 182/444 (40%), Gaps = 47/444 (10%)
Query: 398 QFEENPARSTFKIEDLAVGAILELTFKLPTVSQSFAYFYSLLVEICKNSPKAIAPVFGRA 457
Q P ++ + V I F+LP + +LL+E+CK P ++ V +A
Sbjct: 335 QLVSYPGKNKIPLNYHIVEVIFAELFQLPAPPHIDVMYTTLLIELCKLQPGSLPQVLAQA 394
Query: 458 FRYFYNNLDKLDFELKARFLDWFSIQMSNFNFSWKWNEWEVDSIQWNRTIYNPRMIFIKN 517
Y LD ++ RF++WFS +SNF F W W +W S ++ +P+ F++
Sbjct: 395 TEMLYMRLDTMNTTCVDRFINWFSHHLSNFQFRWSWEDW---SDCLSQDPESPKPKFVRE 451
Query: 518 LIRKELRLTSNSADVEESVTDEFQKF--MDPSFIKREDLVNYYSSLFKDFQLDEGDLRNN 575
++ K +RL+ + + + V F +P+ I + GD +N
Sbjct: 452 VLEKCMRLSYHQR-ILDIVPPTFSALCPANPTCIYK-----------------YGDESSN 493
Query: 576 ELYFRSPSFPFHENVTQLLDFFHKQPDTRSVAELEGILKDIAVNHGSIIED----FNRFT 631
S P H +V L K T E+ ILKD+ + +D FN
Sbjct: 494 -------SLPGH-SVALCLAVAFKSKATND--EIFSILKDVPNPNQDDDDDEGFSFNPLK 543
Query: 632 VTLLIQTIVFCGSRSLSHANKYIDDSREELKAIMAQVEVSPQIKDQWICEAVVRYWNSNS 691
+ + +QT++ ++S SH+ + E K + E + + W ++
Sbjct: 544 IEVFVQTLLHLAAKSFSHSFSALAKFHEVFKTLAESDEGKLH-----VLRVMFEVWRNHP 598
Query: 692 QTGYLILDSLRYNGLISNESVLNFSLTEQCGVNMS-LVDSTSIESIFRILNELAMAADKD 750
Q +++D + ++ +V N+ + + + + L + S R +N+ + K+
Sbjct: 599 QMIAVLVDKMIRTQIVDCAAVANWIFSSELSRDFTRLFVWEILHSTIRKMNKHVLKIQKE 658
Query: 751 V-GSFEYVFNRLVGAANEVLSQLNTIDPIV---VPDLDQDIQATDEELPSLDLAWKYEAI 806
+ + E + + +++ + D ++ + L + +++ E +L L I
Sbjct: 659 LEEAKEKLARQHKRRSDDDDRSSDRKDGVLEEQIERLQEKVESAQSEQKNLFLVIFQRFI 718
Query: 807 MGFLKSVLRKYSDEFSVLTEKFIN 830
M + ++R +D SVLT + N
Sbjct: 719 MILTEHLVRCETDGTSVLTPWYKN 742
>CE28726 [A] KOG1104 Nuclear cap-binding complex subunit NCBP1/CBP80
Length = 754
Score = 61.2 bits (147), Expect = 6e-09
Identities = 98/487 (20%), Positives = 183/487 (37%), Gaps = 78/487 (16%)
Query: 316 DSLWKTPRYSFEVYLPNSVGPFSTV-IP-TTTFTGMLFQDILLDIIESMEFNRLEVARQL 373
D ++ P F ++ FS+ +P ++ LF+ + IIE +FNR AR+L
Sbjct: 280 DMIYPYPLVVFRLFQDADCSAFSSKPLPGDSSIDRFLFEGEIAWIIEKNQFNRKACAREL 339
Query: 374 VTIDLFFTAGIFTEPGLPVAQLLEQFEENPARST-FKIEDLAVGAILELTFKLPTVSQSF 432
+ EENP+ F I + G +L +LP
Sbjct: 340 LAFA----------------------EENPSVPIGFLIFETIFGQML----RLPHAPYPA 373
Query: 433 AYFYSLLVEICKNSPKAIAPVFGRAFRYFYNNLDKLDFELKARFLDWFSIQMSNFNFSWK 492
+ SL++E+ K P + + Y D + R +DWFS +SNF + +
Sbjct: 374 IFHCSLVLELLKLKPDDYPQILVQTVECIYRRADSMQPVCIDRMVDWFSFHLSNFQYRYT 433
Query: 493 WNEWEVDSIQWNRTIYNPRMIFIKNLIRKELRLTSNSADVEESVTDEFQKFMDPSFIKRE 552
W +W+ D + N+ ++ IF++ +I K R S + ++ +F K S R
Sbjct: 434 WTDWK-DCL--NKDAFSGSQIFVREVIEKCRRFGSYE-KIIAALPQDFVKIHPCSPEVR- 488
Query: 553 DLVNYYSSLFKDFQLDEGDLRNNELYFRSPSFPFHENVTQLLDFFHKQPDTRSVAELEGI 612
+ +DE D L R+ +F TQ+ F +QP E
Sbjct: 489 ------------YLIDEED---TALVQRAETF------TQM--FQERQP-------AEAF 518
Query: 613 LKDIAVNHGSIIEDFNRFTVTLLIQTIVFCGSRSLSHANKYIDDSREELKAIMAQVEVSP 672
L ++ N + +N L + ++ S++ SH + + LK + +
Sbjct: 519 LNELKSNDENDELPYNINEFGLFVMVMLKMASKTYSHNFSALFRYQTTLKTVCD----AS 574
Query: 673 QIKDQWICEAVVRYWNSNSQTGYLILDSLRYNGLISNESVLNFSLTEQCGVNMSLVDSTS 732
++ + + E + W +N Q ++ D L +I +V+ + E+ +
Sbjct: 575 ELYQEKLLETLYSCWKTNQQMLMILTDKLLKMQVIDCSAVVGWLFDEK------MWQEHD 628
Query: 733 IESIFRILNELAMAADKDVGSFEYVFNRLVGAANEVLSQLNTIDPIVVPDLDQDIQATDE 792
+ +F +LN+ + + E L + + + + D+ D T E
Sbjct: 629 RQWLFEVLNQALEKLTRQINVVEKDIKELTEKTENKIKEEDDEE----SDIKMDEDETKE 684
Query: 793 ELPSLDL 799
E DL
Sbjct: 685 EKFKQDL 691
Database: KOG eukaryal database 04/03
Posted date: Apr 14, 2003 1:07 PM
Number of letters in database: 30,389,216
Number of sequences in database: 60,738
Lambda K H
0.320 0.137 0.400
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 50,061,132
Number of Sequences: 60738
Number of extensions: 2159073
Number of successful extensions: 5996
Number of sequences better than 1.0e-05: 7
Number of HSP's better than 0.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 5974
Number of HSP's gapped (non-prelim): 14
length of query: 855
length of database: 30,389,216
effective HSP length: 115
effective length of query: 740
effective length of database: 23,404,346
effective search space: 17319216040
effective search space used: 17319216040
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)