ORF STATUS Function Best COG Functional category Pathways and functional systems
r_klactVI4649 good J KOG1678 Translation, ribosomal structure and biogenesis 60s ribosomal protein L15
Only best alignment is shown:
BLASTP 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= r_klactVI4649 1618128 1618739 204
(204 letters)
Database: KOG eukaryal database 04/03
60,738 sequences; 30,389,216 total letters
Searching..................................................done
Color Key for Alignment Scores: 
Score E
Sequences producing significant alignments: (bits) Value
YMR121c [J] KOG1678 60s ribosomal protein L15 372 e-103
YLR029c [J] KOG1678 60s ribosomal protein L15 371 e-103
SPCC576.11 [J] KOG1678 60s ribosomal protein L15 294 5e-80
SPAC1783.08c [J] KOG1678 60s ribosomal protein L15 293 1e-79
At4g16720 [J] KOG1678 60s ribosomal protein L15 277 8e-75
At4g17390 [J] KOG1678 60s ribosomal protein L15 276 1e-74
Hs15431293 [J] KOG1678 60s ribosomal protein L15 275 2e-74
7289089 [J] KOG1678 60s ribosomal protein L15 256 2e-68
Hs20556105 [J] KOG1678 60s ribosomal protein L15 249 2e-66
CE12148 [J] KOG1678 60s ribosomal protein L15 242 2e-64
Hs17449531 [J] KOG1678 60s ribosomal protein L15 217 1e-56
ECU11g1380i [J] KOG1678 60s ribosomal protein L15 204 5e-53
Hs20532993 [J] KOG1678 60s ribosomal protein L15 119 4e-27
Hs22070032 [J] KOG1678 60s ribosomal protein L15 108 4e-24
Hs17453926 [J] KOG1678 60s ribosomal protein L15 74 1e-13
>YMR121c [J] KOG1678 60s ribosomal protein L15
Length = 204
Score = 372 bits (954), Expect = e-103
Identities = 179/204 (87%), Positives = 186/204 (90%)
Query: 1 MGAYKYLEELQRKKQSDVLRFLQRVRVWEYRQKNVIHRASRPTRPDKARRLGYKAKQGFX 60
MGAYKYLEEL+RKKQSDVLRFLQRVRVWEYRQKNVIHRA+RPTRPDKARRLGYKAKQGF
Sbjct: 1 MGAYKYLEELERKKQSDVLRFLQRVRVWEYRQKNVIHRAARPTRPDKARRLGYKAKQGFV 60
Query: 61 XXXXXXXXXXXXXXXSKGATYGKPTNQGVNQLKYQRSLRATAEERVGRRAANLRVLNSYW 120
KGATYGKPTNQGVN+LKYQRSLRATAEERVGRRAANLRVLNSYW
Sbjct: 61 IYRVRVRRGNRKRPVPKGATYGKPTNQGVNELKYQRSLRATAEERVGRRAANLRVLNSYW 120
Query: 121 INQDSTYKYFEVILVDPSHKAIRRDAKYNWICNPVHKHREARGLTATGKKSRGINKGHKF 180
+NQDSTYKYFEVILVDP HKAIRRDA+YNWICNPVHKHREARGLTATGKKSRGINKGHKF
Sbjct: 121 VNQDSTYKYFEVILVDPQHKAIRRDARYNWICNPVHKHREARGLTATGKKSRGINKGHKF 180
Query: 181 HNTQAGRRKTWKRQNTLSLWRYRK 204
+NT+AGRRKTWKRQNTLSLWRYRK
Sbjct: 181 NNTKAGRRKTWKRQNTLSLWRYRK 204
>YLR029c [J] KOG1678 60s ribosomal protein L15
Length = 204
Score = 371 bits (952), Expect = e-103
Identities = 179/204 (87%), Positives = 186/204 (90%)
Query: 1 MGAYKYLEELQRKKQSDVLRFLQRVRVWEYRQKNVIHRASRPTRPDKARRLGYKAKQGFX 60
MGAYKYLEELQRKKQSDVLRFLQRVRVWEYRQKNVIHRA+RPTRPDKARRLGYKAKQGF
Sbjct: 1 MGAYKYLEELQRKKQSDVLRFLQRVRVWEYRQKNVIHRAARPTRPDKARRLGYKAKQGFV 60
Query: 61 XXXXXXXXXXXXXXXSKGATYGKPTNQGVNQLKYQRSLRATAEERVGRRAANLRVLNSYW 120
KGATYGKPTNQGVN+LKYQRSLRATAEERVGRRAANLRVLNSYW
Sbjct: 61 IYRVRVRRGNRKRPVPKGATYGKPTNQGVNELKYQRSLRATAEERVGRRAANLRVLNSYW 120
Query: 121 INQDSTYKYFEVILVDPSHKAIRRDAKYNWICNPVHKHREARGLTATGKKSRGINKGHKF 180
+NQDSTYKYFEVILVDP HKAIRRDA+YNWIC+PVHKHREARGLTATGKKSRGINKGHKF
Sbjct: 121 VNQDSTYKYFEVILVDPQHKAIRRDARYNWICDPVHKHREARGLTATGKKSRGINKGHKF 180
Query: 181 HNTQAGRRKTWKRQNTLSLWRYRK 204
+NT+AGRRKTWKRQNTLSLWRYRK
Sbjct: 181 NNTKAGRRKTWKRQNTLSLWRYRK 204
>SPCC576.11 [J] KOG1678 60s ribosomal protein L15
Length = 201
Score = 294 bits (753), Expect = 5e-80
Identities = 145/203 (71%), Positives = 160/203 (78%), Gaps = 2/203 (0%)
Query: 1 MGAYKYLEELQRKKQSDVLRFLQRVRVWEYRQKNVIHRASRPTRPDKARRLGYKAKQGFX 60
MGAYKYLEEL +KKQSDV FL RVR WEYRQ NVIHRASRP+RPDKARRLGYKAKQG+
Sbjct: 1 MGAYKYLEELAKKKQSDVNLFLSRVRAWEYRQMNVIHRASRPSRPDKARRLGYKAKQGYV 60
Query: 61 XXXXXXXXXXXXXXXSKGATYGKPTNQGVNQLKYQRSLRATAEERVGRRAANLRVLNSYW 120
KG TYGKP +QGVN LKYQRS R TAEERVGR +NLRVLNSYW
Sbjct: 61 IYRIRVRRGGRKRPVPKGQTYGKPVHQGVNHLKYQRSARCTAEERVGRYCSNLRVLNSYW 120
Query: 121 INQDSTYKYFEVILVDPSHKAIRRDAKYNWICNPVHKHREARGLTATGKKSRGINKGHKF 180
+NQD+TYK+FEVILVDPSHKAIRRD + NWI NPVHKHRE+RGLT+ GKKSRGI KGH+F
Sbjct: 121 VNQDATYKFFEVILVDPSHKAIRRDPRINWIVNPVHKHRESRGLTSIGKKSRGIGKGHRF 180
Query: 181 HNTQAGRRKTWKRQNTLSLWRYR 203
+N+ + TW R NTLSL RYR
Sbjct: 181 NNSP--QHATWLRHNTLSLRRYR 201
>SPAC1783.08c [J] KOG1678 60s ribosomal protein L15
Length = 201
Score = 293 bits (750), Expect = 1e-79
Identities = 144/203 (70%), Positives = 160/203 (77%), Gaps = 2/203 (0%)
Query: 1 MGAYKYLEELQRKKQSDVLRFLQRVRVWEYRQKNVIHRASRPTRPDKARRLGYKAKQGFX 60
MGAYKYLEEL +KKQSDV FL RVR WEYRQ NVIHRASRP+RPDKARRLGYKAKQG+
Sbjct: 1 MGAYKYLEELAKKKQSDVNLFLSRVRAWEYRQMNVIHRASRPSRPDKARRLGYKAKQGYV 60
Query: 61 XXXXXXXXXXXXXXXSKGATYGKPTNQGVNQLKYQRSLRATAEERVGRRAANLRVLNSYW 120
KG TYGKP +QGVN LKYQRS R TAEERVGR +NLRVLNSYW
Sbjct: 61 IYRIRVRRGGRKRPVPKGQTYGKPVHQGVNHLKYQRSARCTAEERVGRYCSNLRVLNSYW 120
Query: 121 INQDSTYKYFEVILVDPSHKAIRRDAKYNWICNPVHKHREARGLTATGKKSRGINKGHKF 180
+NQD+TYK+FEVILVDPSHKAIRRD + NWI NPVHKHRE+RGLT+ GKKSRGI KGH++
Sbjct: 121 VNQDATYKFFEVILVDPSHKAIRRDPRINWIVNPVHKHRESRGLTSIGKKSRGIGKGHRY 180
Query: 181 HNTQAGRRKTWKRQNTLSLWRYR 203
+N+ + TW R NTLSL RYR
Sbjct: 181 NNSP--QHATWLRHNTLSLRRYR 201
>At4g16720 [J] KOG1678 60s ribosomal protein L15
Length = 204
Score = 277 bits (708), Expect = 8e-75
Identities = 133/204 (65%), Positives = 153/204 (74%), Gaps = 1/204 (0%)
Query: 1 MGAYKYLEELQRKKQSDVLRFLQRVRVWEYRQKNVIHRASRPTRPDKARRLGYKAKQGFX 60
MGAYKY+ EL RKKQSDV+RFLQRVR WEYRQ+ I R RPTRPDKARRLGYKAKQGF
Sbjct: 1 MGAYKYVSELWRKKQSDVMRFLQRVRCWEYRQQPSIVRLVRPTRPDKARRLGYKAKQGFV 60
Query: 61 XXXXXXXXXXXXXXXSKGATYGKPTNQGVNQLKYQRSLRATAEERVGRRAANLRVLNSYW 120
KG YGKPTNQGV QLK+QRS R+ AEER GR+ LRV+NSYW
Sbjct: 61 VYRVRVRRGGRKRPVPKGIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGLRVVNSYW 120
Query: 121 INQDSTYKYFEVILVDPSHKAIRRDAKYNWICNPVHKHREARGLTATGKKSRGI-NKGHK 179
+N+DSTYKY+E+ILVDP+H A+R D + NWICNPVHKHRE RGLT+ GKK+RG+ KGH
Sbjct: 121 LNEDSTYKYYEIILVDPAHNAVRNDPRINWICNPVHKHRELRGLTSEGKKNRGLRGKGHN 180
Query: 180 FHNTQAGRRKTWKRQNTLSLWRYR 203
H + RR TWK+ N+LSL RYR
Sbjct: 181 NHKNRPSRRATWKKNNSLSLRRYR 204
>At4g17390 [J] KOG1678 60s ribosomal protein L15
Length = 204
Score = 276 bits (706), Expect = 1e-74
Identities = 132/204 (64%), Positives = 153/204 (74%), Gaps = 1/204 (0%)
Query: 1 MGAYKYLEELQRKKQSDVLRFLQRVRVWEYRQKNVIHRASRPTRPDKARRLGYKAKQGFX 60
MGAYKY+ EL RKKQSDV+RFLQRVR WEYRQ+ I R RPTRPDKARRLGYKAKQGF
Sbjct: 1 MGAYKYVSELWRKKQSDVMRFLQRVRCWEYRQQPSIVRLVRPTRPDKARRLGYKAKQGFV 60
Query: 61 XXXXXXXXXXXXXXXSKGATYGKPTNQGVNQLKYQRSLRATAEERVGRRAANLRVLNSYW 120
KG YGKPTNQGV QLK+QRS R+ AEER GR+ LRV+NSYW
Sbjct: 61 VYRVRVRRGGRKRPVPKGIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGLRVVNSYW 120
Query: 121 INQDSTYKYFEVILVDPSHKAIRRDAKYNWICNPVHKHREARGLTATGKKSRGI-NKGHK 179
+N+DSTYKY+E+ILVDP+H A+R D + NWICNPVHKHRE RGLT+ GKK+RG+ KGH
Sbjct: 121 LNEDSTYKYYEIILVDPAHNAVRNDPRINWICNPVHKHRELRGLTSEGKKNRGLRGKGHN 180
Query: 180 FHNTQAGRRKTWKRQNTLSLWRYR 203
H + RR TWK+ N++SL RYR
Sbjct: 181 NHKNRPSRRATWKKNNSISLRRYR 204
>Hs15431293 [J] KOG1678 60s ribosomal protein L15
Length = 204
Score = 275 bits (704), Expect = 2e-74
Identities = 132/204 (64%), Positives = 154/204 (74%), Gaps = 1/204 (0%)
Query: 1 MGAYKYLEELQRKKQSDVLRFLQRVRVWEYRQKNVIHRASRPTRPDKARRLGYKAKQGFX 60
MGAYKY++EL RKKQSDV+RFL RVR W+YRQ + +HRA RPTRPDKARRLGYKAKQG+
Sbjct: 1 MGAYKYIQELWRKKQSDVMRFLLRVRCWQYRQLSALHRAPRPTRPDKARRLGYKAKQGYV 60
Query: 61 XXXXXXXXXXXXXXXSKGATYGKPTNQGVNQLKYQRSLRATAEERVGRRAANLRVLNSYW 120
KGATYGKP + GVNQLK+ RSL++ AEER GR LRVLNSYW
Sbjct: 61 IYRIRVRRGGRKRPVPKGATYGKPVHHGVNQLKFARSLQSVAEERAGRHCGALRVLNSYW 120
Query: 121 INQDSTYKYFEVILVDPSHKAIRRDAKYNWICNPVHKHREARGLTATGKKSRGINKGHKF 180
+ +DSTYK+FEVIL+DP HKAIRR+ WI PVHKHRE RGLT+ G+KSRG+ KGHKF
Sbjct: 121 VGEDSTYKFFEVILIDPFHKAIRRNPDTQWITKPVHKHREMRGLTSAGRKSRGLGKGHKF 180
Query: 181 HNTQAG-RRKTWKRQNTLSLWRYR 203
H+T G RR W+R+NTL L RYR
Sbjct: 181 HHTIGGSRRAAWRRRNTLQLHRYR 204
>7289089 [J] KOG1678 60s ribosomal protein L15
Length = 204
Score = 256 bits (653), Expect = 2e-68
Identities = 125/204 (61%), Positives = 147/204 (71%), Gaps = 1/204 (0%)
Query: 1 MGAYKYLEELQRKKQSDVLRFLQRVRVWEYRQKNVIHRASRPTRPDKARRLGYKAKQGFX 60
MGAY+Y++EL RKKQSDV+R+L R+RVW+YRQ +HR+ RPTRPDKARRLGY+AKQGF
Sbjct: 1 MGAYRYMQELYRKKQSDVMRYLLRIRVWQYRQLTKLHRSPRPTRPDKARRLGYRAKQGFV 60
Query: 61 XXXXXXXXXXXXXXXSKGATYGKPTNQGVNQLKYQRSLRATAEERVGRRAANLRVLNSYW 120
KG TYGKP + GVNQLK R L++ AEERVGRR LRVLNSYW
Sbjct: 61 IYRIRVRRGGRKRPVPKGCTYGKPKSHGVNQLKPYRGLQSIAEERVGRRLGGLRVLNSYW 120
Query: 121 INQDSTYKYFEVILVDPSHKAIRRDAKYNWICNPVHKHREARGLTATGKKSRGINKGHKF 180
I QD++YKYFEVIL+D H AIRRD K NWIC VHKHRE RGLT+ GK SRGI KG+++
Sbjct: 121 IAQDASYKYFEVILIDTHHSAIRRDPKINWICKHVHKHRELRGLTSAGKSSRGIGKGYRY 180
Query: 181 HNTQAG-RRKTWKRQNTLSLWRYR 203
T G RR WKR+N + R R
Sbjct: 181 SQTIGGSRRAAWKRKNREHMHRKR 204
>Hs20556105 [J] KOG1678 60s ribosomal protein L15
Length = 186
Score = 249 bits (636), Expect = 2e-66
Identities = 124/204 (60%), Positives = 146/204 (70%), Gaps = 19/204 (9%)
Query: 1 MGAYKYLEELQRKKQSDVLRFLQRVRVWEYRQKNVIHRASRPTRPDKARRLGYKAKQGFX 60
MGAYKY++EL RKKQSDV+RFL RVR W+YRQ + +HRA RPTRPDKARRLGYKAKQG+
Sbjct: 1 MGAYKYIQELWRKKQSDVMRFLLRVRCWQYRQLSALHRAPRPTRPDKARRLGYKAKQGYV 60
Query: 61 XXXXXXXXXXXXXXXSKGATYGKPTNQGVNQLKYQRSLRATAEERVGRRAANLRVLNSYW 120
+ G NQLK+ RSL++ AEERVGR LRVLNSYW
Sbjct: 61 IYRI------------------RVRRGGRNQLKFARSLQSVAEERVGRHCGALRVLNSYW 102
Query: 121 INQDSTYKYFEVILVDPSHKAIRRDAKYNWICNPVHKHREARGLTATGKKSRGINKGHKF 180
+ +DSTYK+FEVIL+DP HKAIRR+ WI PVHKHRE RGLT+ G+KSRG+ KGHKF
Sbjct: 103 VGEDSTYKFFEVILIDPFHKAIRRNPDTQWITKPVHKHREMRGLTSAGRKSRGLGKGHKF 162
Query: 181 HNTQAG-RRKTWKRQNTLSLWRYR 203
H+T G RR W+R+NTL L RYR
Sbjct: 163 HHTIGGSRRAAWRRRNTLQLHRYR 186
>CE12148 [J] KOG1678 60s ribosomal protein L15
Length = 204
Score = 242 bits (618), Expect = 2e-64
Identities = 116/204 (56%), Positives = 143/204 (69%), Gaps = 1/204 (0%)
Query: 1 MGAYKYLEELQRKKQSDVLRFLQRVRVWEYRQKNVIHRASRPTRPDKARRLGYKAKQGFX 60
MGAYKY++E+ RKKQSD LR+L R+R W YRQ + +HR RPTRP+KARRLGY+AKQGF
Sbjct: 1 MGAYKYMQEIWRKKQSDALRYLLRIRTWHYRQLSAVHRVPRPTRPEKARRLGYRAKQGFV 60
Query: 61 XXXXXXXXXXXXXXXSKGATYGKPTNQGVNQLKYQRSLRATAEERVGRRAANLRVLNSYW 120
KG TYGKP GVN+LK +S +A AE R GRR +LRVLNSYW
Sbjct: 61 VYRVRVRRGNRKRPVCKGQTYGKPKTHGVNELKNAKSKQAVAEGRAGRRLGSLRVLNSYW 120
Query: 121 INQDSTYKYFEVILVDPSHKAIRRDAKYNWICNPVHKHREARGLTATGKKSRGINKGHKF 180
+ +DSTYK++EV+L+DP HKAIRR+ WI PVHKHRE RGLT+ G+KSRG+ KG +F
Sbjct: 121 VAEDSTYKFYEVVLIDPFHKAIRRNPDTQWITKPVHKHREQRGLTSAGRKSRGLGKGWRF 180
Query: 181 HNTQAG-RRKTWKRQNTLSLWRYR 203
T+ G + K WKR+NT R R
Sbjct: 181 SATRGGSQAKNWKRKNTKVFHRKR 204
>Hs17449531 [J] KOG1678 60s ribosomal protein L15
Length = 204
Score = 217 bits (552), Expect = 1e-56
Identities = 110/203 (54%), Positives = 138/203 (67%), Gaps = 1/203 (0%)
Query: 1 MGAYKYLEELQRKKQSDVLRFLQRVRVWEYRQKNVIHRASRPTRPDKARRLGYKAKQGFX 60
M AYKY++E RKKQSDV+RFL RV W+Y Q + +H A PT PDKAR+LGYKAKQG+
Sbjct: 1 MDAYKYIQEQWRKKQSDVMRFLLRVCCWQYCQLSAVHGAPCPTWPDKARQLGYKAKQGYI 60
Query: 61 XXXXXXXXXXXXXXXSKGATYGKPTNQGVNQLKYQRSLRATAEERVGRRAANLRVLNSYW 120
KGATYGKP + GVNQLK+ RSL++ AEERVG LRVLNSYW
Sbjct: 61 IYRIHVHHGGQKCPIPKGATYGKPVHHGVNQLKFARSLQSIAEERVGHNCGALRVLNSYW 120
Query: 121 INQDSTYKYFEVILVDPSHKAIRRDAKYNWICNPVHKHREARGLTATGKKSRGINKGHKF 180
+ +DSTY++FEVIL+DP ++ IRR+ I PVHK RE GLT+ G++S G+ K HKF
Sbjct: 121 VGEDSTYRFFEVILIDPFYEVIRRNPDTQSITKPVHKQREMCGLTSAGQRSCGLGKCHKF 180
Query: 181 HNTQAGR-RKTWKRQNTLSLWRY 202
H+T G W+R++TL L RY
Sbjct: 181 HHTIDGSCWAAWRRRDTLQLHRY 203
>ECU11g1380i [J] KOG1678 60s ribosomal protein L15
Length = 204
Score = 204 bits (520), Expect = 5e-53
Identities = 101/204 (49%), Positives = 132/204 (64%), Gaps = 1/204 (0%)
Query: 1 MGAYKYLEELQRKKQSDVLRFLQRVRVWEYRQKNVIHRASRPTRPDKARRLGYKAKQGFX 60
MGA YL E+ R+KQSDV+R+L R+RV EYRQ+ R +PT ++AR LGYKAKQG+
Sbjct: 1 MGAVNYLREIHRRKQSDVMRYLLRIRVCEYRQRGECFRVEKPTFLERARTLGYKAKQGYV 60
Query: 61 XXXXXXXXXXXXXXXSKGATYGKPTNQGVNQLKYQRSLRATAEERVGRRAANLRVLNSYW 120
G T GK N G+NQ+K +A+AE G++ +NL VLNSYW
Sbjct: 61 LYIARVKKGNMKRNYHNGNTRGKCVNAGINQIKPSLRKQASAEMIAGKKCSNLGVLNSYW 120
Query: 121 INQDSTYKYFEVILVDPSHKAIRRDAKYNWICNPVHKHREARGLTATGKKSRGINKGHKF 180
+ QD+ YKY+EVI+VD H+AIR D K NWIC KHRE RGLT+ +KSRG+ KG KF
Sbjct: 121 VGQDAAYKYYEVIMVDRDHQAIRNDPKINWICKGTMKHRECRGLTSASRKSRGLGKGVKF 180
Query: 181 HNTQAGR-RKTWKRQNTLSLWRYR 203
+ ++ G R W+R+NTL L +YR
Sbjct: 181 NKSKGGSIRSCWRRRNTLVLQKYR 204
>Hs20532993 [J] KOG1678 60s ribosomal protein L15
Length = 257
Score = 119 bits (297), Expect = 4e-27
Identities = 67/147 (45%), Positives = 81/147 (54%), Gaps = 34/147 (23%)
Query: 22 LQRVRVWEYRQKNVIHRASRPTRPDKARRLGYKAKQGFXXXXXXXXXXXXXXXXSKGATY 81
L VR Q + +HRA R T+PDKA RLGYKAKQG+
Sbjct: 145 LPPVRAGTEWQLSALHRAPRSTQPDKACRLGYKAKQGY---------------------- 182
Query: 82 GKPTNQGVNQLKYQRSLRATAEERVGRRAANLRVLNSYWINQDSTYKYFEVILVDPSHKA 141
+ Y+ +R EE+ G LRVLNSYW+ +DSTYK+FEVIL+DP HKA
Sbjct: 183 ----------IIYRICVRR--EEQAGHHCGALRVLNSYWVGEDSTYKFFEVILIDPFHKA 230
Query: 142 IRRDAKYNWICNPVHKHREARGLTATG 168
IRR+ WI PVHKHRE RGLT+ G
Sbjct: 231 IRRNPDTQWITKPVHKHREMRGLTSAG 257
>Hs22070032 [J] KOG1678 60s ribosomal protein L15
Length = 90
Score = 108 bits (271), Expect = 4e-24
Identities = 51/90 (56%), Positives = 60/90 (66%)
Query: 1 MGAYKYLEELQRKKQSDVLRFLQRVRVWEYRQKNVIHRASRPTRPDKARRLGYKAKQGFX 60
MGAYKY+ EL RKKQSDV+ FL RVR W+YRQ + +HRA RPTRPDK +LGYK KQG+
Sbjct: 1 MGAYKYIHELWRKKQSDVMSFLLRVRCWQYRQLSALHRAPRPTRPDKVHQLGYKIKQGYV 60
Query: 61 XXXXXXXXXXXXXXXSKGATYGKPTNQGVN 90
KGATYGKP + G+N
Sbjct: 61 IYGIRILRDGRKCSVPKGATYGKPVHHGIN 90
>Hs17453926 [J] KOG1678 60s ribosomal protein L15
Length = 156
Score = 73.9 bits (180), Expect = 1e-13
Identities = 33/55 (60%), Positives = 42/55 (76%)
Query: 91 QLKYQRSLRATAEERVGRRAANLRVLNSYWINQDSTYKYFEVILVDPSHKAIRRD 145
QL + RSL++ EER GR LR+LNSYW + STYK+FEVIL+DP HKA+RR+
Sbjct: 83 QLNFARSLQSFVEERAGRHFGALRILNSYWAGEGSTYKFFEVILIDPFHKAMRRN 137
Database: KOG eukaryal database 04/03
Posted date: Apr 14, 2003 1:07 PM
Number of letters in database: 30,389,216
Number of sequences in database: 60,738
Lambda K H
0.319 0.133 0.405
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 11,273,674
Number of Sequences: 60738
Number of extensions: 393771
Number of successful extensions: 881
Number of sequences better than 1.0e-05: 15
Number of HSP's better than 0.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 844
Number of HSP's gapped (non-prelim): 16
length of query: 204
length of database: 30,389,216
effective HSP length: 101
effective length of query: 103
effective length of database: 24,254,678
effective search space: 2498231834
effective search space used: 2498231834
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)