ORF STATUS Function Best COG Functional category Pathways and functional systems
r_klactVI4726 good D KOG1915 Cell cycle control, cell division, chromosome partitioning Cell cycle control protein (crooked neck)
Only best alignment is shown:
BLASTP 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= r_klactVI4726 1645592 1647643 684
(684 letters)
Database: KOG eukaryal database 04/03
60,738 sequences; 30,389,216 total letters
Searching..................................................done
Color Key for Alignment Scores: 
Score E
Sequences producing significant alignments: (bits) Value
YLR117c [D] KOG1915 Cell cycle control protein (crooked neck) 680 0.0
SPBC31F10.11c [D] KOG1915 Cell cycle control protein (crooked neck) 489 e-138
Hs11072091 [D] KOG1915 Cell cycle control protein (crooked neck) 462 e-130
7290299 [D] KOG1915 Cell cycle control protein (crooked neck) 442 e-124
CE28622 [D] KOG1915 Cell cycle control protein (crooked neck) 434 e-121
At5g45990 [D] KOG1915 Cell cycle control protein (crooked neck) 384 e-106
At5g41770 [D] KOG1915 Cell cycle control protein (crooked neck) 352 1e-96
At3g13210 [D] KOG1915 Cell cycle control protein (crooked neck) 325 1e-88
At3g51110 [D] KOG1915 Cell cycle control protein (crooked neck) 305 1e-82
SPBC211.02c [A] KOG2047 mRNA splicing factor 68 4e-11
YMR229c [A] KOG1070 rRNA processing protein Rrp5 59 2e-08
At5g28740 [A] KOG2047 mRNA splicing factor 58 4e-08
At3g17040 [R] KOG1124 FOG: TPR repeat 53 2e-06
Hs20544347 [A] KOG1070 rRNA processing protein Rrp5 52 2e-06
YDR449c [R] KOG2396 HAT (Half-A-TPR) repeat-containing protein 51 7e-06
7303287 [A] KOG2047 mRNA splicing factor 51 7e-06
7301703 [A] KOG1258 mRNA processing protein 51 7e-06
>YLR117c [D] KOG1915 Cell cycle control protein (crooked neck)
Length = 687
Score = 680 bits (1755), Expect = 0.0
Identities = 328/681 (48%), Positives = 473/681 (69%), Gaps = 14/681 (2%)
Query: 11 ITADNILKDAFSQKKQIAATTKADILDLEELKDWQRRKRTEYETVLKRNRLDLRQWMRYA 70
++A+ IL+D + + ++ +T DILDLEEL+++QRRKRTEYE LKRNRLD+ QW+RYA
Sbjct: 13 VSAEQILRDVYKKGQKARGSTNIDILDLEELREYQRRKRTEYEGYLKRNRLDMGQWIRYA 72
Query: 71 QFEFDQKDIRRARSIYERALLVDHGFIPLWIQYIDSEIKWKNINHARNLLDRATNALPRV 130
QFE +Q D+RRARSI+ERALLVD FIPLWI+YID+E+K K INHARNL++RA + LPRV
Sbjct: 73 QFEIEQHDMRRARSIFERALLVDSSFIPLWIRYIDAELKVKCINHARNLMNRAISTLPRV 132
Query: 131 DKLWFKYLLLEESLGNQGIVRGIYTRWCSFEPGPDAWDSFIEFETRCLNFENVRNIYSKF 190
DKLW+KYL++EESL N IVR +YT+WCS EPG +AW+SF++FE R N+ VR IYSK+
Sbjct: 133 DKLWYKYLIVEESLNNVEIVRSLYTKWCSLEPGVNAWNSFVDFEIRQKNWNGVREIYSKY 192
Query: 191 VLVHPQIDTWLKWVRFEQTHGDISSVRTVFSFALDTLTSFSGTPL---VDIERVIGSFAS 247
V+ HPQ+ TWLKWVRFE HG+ R+V+S A+DT+ + + +++ +++ SFA
Sbjct: 193 VMAHPQMQTWLKWVRFENRHGNTEFTRSVYSLAIDTVANLQNLQIWSDMEVAKLVNSFAH 252
Query: 248 WEASQGEYERSRTLYRLAVERWPISEALKEQQIQFEKKFGSSKNMEDIVIAKRKAEYEQY 307
WEA+Q EYERS LY++A+E+WP ++ LK + FEK+FG ++E+ + KRK EYE
Sbjct: 253 WEAAQQEYERSSALYQIAIEKWPSNQLLKAGLLDFEKQFGDINSIEETISYKRKMEYETI 312
Query: 308 LKSDPYHYSTWWVYIDLVEEKYQEQLTSAFQSFIELAKPKSLVKDSSWKRYIRICVRYLV 367
L ++ Y Y TWW+Y+DL+ E + +Q+ F+ I ++PK L K+ WKRYI + +RY+
Sbjct: 313 LSNNAYDYDTWWLYLDLISESFPKQIMQTFEKAIVDSRPKELSKNVQWKRYIYLWMRYIC 372
Query: 368 YLELTINDLPTIRSVYQDIL-DIIPHKKFTFGKLWIMYAEFEIRQNNLLKARKILGVSLG 426
Y+EL + + ++Q ++ DIIPHK FTF K+W+MYA+F IR +++ KARKILG ++G
Sbjct: 373 YVELELENSLLEEELFQRLIDDIIPHKHFTFSKIWLMYAKFLIRHDDVPKARKILGKAIG 432
Query: 427 KSPKPKVFKYYINLEIRLKEFDRVRKLYEKYIDFNPSSVQSWLDYAELEENLGDEDRSRG 486
PK K FK YI LE++LKEFDRVRK+YEK+I+F PS +Q W Y ELEENLGD DR RG
Sbjct: 433 LCPKAKTFKGYIELEVKLKEFDRVRKIYEKFIEFQPSDLQIWSQYGELEENLGDWDRVRG 492
Query: 487 IYDISMSNNVG-LSESDQLIVIQRYIAFETDAAEYEKARELYEKYLILSRYDVNIWINQA 545
IY I++ N L++ +++++Q+YI FET++ E+EKAR+LY +YL L++Y WI A
Sbjct: 493 IYTIALDENSDFLTKEAKIVLLQKYITFETESQEFEKARKLYRRYLELNQYSPQSWIEFA 552
Query: 546 LFESTIPTETQL--IAYQQSHQXXXXXXXXXXXXXXXITPENKHHTRAIFEKAISYFKEH 603
+++++ PTE QL +A QS IT ENK R +FE+AI +FKE
Sbjct: 553 MYQTSTPTEQQLLDLAKLQSEN-------VDEDIEFEITDENKLEARKVFEEAIVFFKEK 605
Query: 604 NEDKKRQQVLQSLLEYEKVHGNQETLEKVNARQPSLVREKVTIDNIEQESYKLDFPDDRV 663
++ + R +L++L +YE+ +G + E V R P ++++ + +E+E FPDD
Sbjct: 606 DDKQGRLSILEALKDYEETYGTELDQETVKKRFPKVIKKVRLQNGVEEEFVDYIFPDDID 665
Query: 664 AQPPIARNLLALAKQWEKNSS 684
P L LAK+W++ +
Sbjct: 666 DDKPKPSKFLELAKKWKQEQA 686
>SPBC31F10.11c [D] KOG1915 Cell cycle control protein (crooked neck)
Length = 674
Score = 489 bits (1260), Expect = e-138
Identities = 264/677 (38%), Positives = 420/677 (61%), Gaps = 35/677 (5%)
Query: 11 ITADNILKDAFSQKKQIAATTKADILDLEELKDWQRRKRTEYETVLKRNRLDLRQWMRYA 70
I+A+ +L++A ++ K +I DLEEL+++Q RKR E+E ++RNRL + WMRY
Sbjct: 18 ISAEQLLREAVERQDVAFVPPKINITDLEELQEFQGRKRKEFEDAIRRNRLAMGHWMRYG 77
Query: 71 QFEFDQKDIRRARSIYERALLVDHGFIPLWIQYIDSEIKWKNINHARNLLDRATNALPRV 130
Q+E DQK+ RARS++ERAL VD +IPLW++YI+ E+K +NINHARNL DRA LPRV
Sbjct: 78 QWELDQKEFARARSVFERALDVDSTYIPLWLKYIECEMKNRNINHARNLFDRAVTQLPRV 137
Query: 131 DKLWFKYLLLEESLGNQGIVRGIYTRWCSFEPGPDAWDSFIEFETRCLNFENVRNIYSKF 190
DKLW+KY+ +EE LGN R ++ RW +EP + W S+I E R E R IY +F
Sbjct: 138 DKLWYKYVYMEEMLGNITGCRQVFERWLKWEPDENCWMSYIRMERRYHENERARGIYERF 197
Query: 191 VLVHPQIDTWLKWVRFEQTHGDISSVRTVFSFALDTLTSFSGTPLVDIERVIGSFASWEA 250
V+VHP++ WL+W RFE+ G+ ++VR V+ A+D L G ++ ER +FA +E
Sbjct: 198 VVVHPEVTNWLRWARFEEECGNAANVRQVYLAAIDAL----GQEFLN-ERFFIAFAKFEI 252
Query: 251 SQGEYERSRTLYRLAVERWPISEALK--EQQIQFEKKFGSSKNMEDIVIAKRKAEYEQYL 308
Q EYER+RT+++ A++ P S++++ ++ FEK+FG +E V+ KR+ +YE+ L
Sbjct: 253 RQKEYERARTIFKYAIDFMPRSKSMELYKEYTHFEKQFGDHLGVESTVLDKRRLQYEKLL 312
Query: 309 KSDPYHYSTWWVYIDLVE-EKYQEQLTSAFQSFIE-LAKPKSLVKDSSWKRYIRICVRYL 366
K PY Y TW +DL++ E+ + + +++ + +AK +V+ ++W+RY+ I + Y
Sbjct: 313 KDSPYDYDTW---LDLLKLEESAGDINTIRETYEKAIAKVPEVVEKNAWRRYVYIWLNYC 369
Query: 367 VYLELTINDLPTIRSVYQDILDIIPHKKFTFGKLWIMYAEFEIRQNNLLKARKILGVSLG 426
++ E+ + D+ R VYQ+ L +IPHKKFTF KLW+MYA FE+RQ + ARK LG +LG
Sbjct: 370 LFEEIDVKDVDRARKVYQEALKLIPHKKFTFAKLWLMYAMFELRQRKIDVARKTLGRALG 429
Query: 427 KSPKPKVFKYYINLEIRLKEFDRVRKLYEKYIDFNPSSVQSWLDYAELEENLGDEDRSRG 486
PKPK+F+ YI E +K+FDR R LYEK+I ++P + WL YA LE LGD DR+R
Sbjct: 430 MCPKPKLFRGYIEFEDAIKQFDRCRILYEKWILYDPEACAPWLGYAALETKLGDSDRARA 489
Query: 487 IYDISMSNNVGLSESDQLIVIQRYIAFETDAAEYEKARELYEKYLILSRYDVNIWINQAL 546
+Y++++ N + E+ +L V + YI FE + EY KAR +Y++ L+ + V +WI+ A
Sbjct: 490 LYNLAV--NQPILETPEL-VWKAYIDFEFEEMEYGKARSIYQQ-LLRTAPHVKVWISFAN 545
Query: 547 FESTIPTETQLIAYQQSHQXXXXXXXXXXXXXXXITPENKHHTRAIFEKAISYFKEHNED 606
FE IA+ + +P R +FE A+++ ++
Sbjct: 546 FE---------IAHLEDDDEEPPNEEVA-------SPTAVVRARNVFENALAHLRQQGLK 589
Query: 607 KKRQQVLQSLLEYEKVHGNQETLEKVNARQPSLVREKVTIDNIEQESYKLD--FPDDRVA 664
++R +L++ ++E +HG ++T + V++ P +V+++ +++ E Y LD FPD
Sbjct: 590 EERVVLLEAWKQFEAMHGTEDTRKHVSSLMPQVVKKRRRLEDGSFEEY-LDYLFPDTATD 648
Query: 665 QPPIARNLLALAKQWEK 681
Q R +L L+++W++
Sbjct: 649 QGDKMRKMLELSRKWKE 665
>Hs11072091 [D] KOG1915 Cell cycle control protein (crooked neck)
Length = 836
Score = 462 bits (1189), Expect = e-130
Identities = 261/682 (38%), Positives = 399/682 (58%), Gaps = 54/682 (7%)
Query: 11 ITADNILKDAFSQKKQIAATTKAD-ILDLEELKDWQRRKRTEYETVLKRNRLDLRQWMRY 69
ITA+ +L++A ++ ++ I D EEL D++ RKR +E +++NR + W++Y
Sbjct: 177 ITAEQLLREAKERELELLPPPPQQRITDEEELNDYKLRKRKTFEDNIRKNRTVISNWIKY 236
Query: 70 AQFEFDQKDIRRARSIYERALLVDHGFIPLWIQYIDSEIKWKNINHARNLLDRATNALPR 129
AQ+E K+I+RARSIYERAL VD+ I LW++Y + E+K + +NHARN+ DRA LPR
Sbjct: 237 AQWEESLKEIQRARSIYERALDVDYRNITLWLKYAEMEMKNRQVNHARNIWDRAITTLPR 296
Query: 130 VDKLWFKYLLLEESLGNQGIVRGIYTRWCSFEPGPDAWDSFIEFETRCLNFENVRNIYSK 189
V++ W+KY +EE LGN R ++ RW ++P AW S+I FE R + R IY +
Sbjct: 297 VNQFWYKYTYMEEMLGNVAGARQVFERWMEWQPEEQAWHSYINFELRYKEVDRARTIYER 356
Query: 190 FVLVHPQIDTWLKWVRFEQTHGDISSVRTVFSFALDTLTSFSGTPLVDIERVIGSFASWE 249
FVLVHP + W+K+ RFE+ H + R V+ A++ F G +D E + +FA +E
Sbjct: 357 FVLVHPDVKNWIKYARFEEKHAYFAHARKVYERAVE----FFGDEHMD-EHLYVAFAKFE 411
Query: 250 ASQGEYERSRTLYRLAVERWPISEA--LKEQQIQFEKKFGSSKNMEDIVIAKRKAEYEQY 307
+Q E+ER R +Y+ A++R +A L + FEKKFG + +EDI+++KR+ +YE+
Sbjct: 412 ENQKEFERVRVIYKYALDRISKQDAQELFKNYTIFEKKFGDRRGIEDIIVSKRRFQYEEE 471
Query: 308 LKSDPYHYSTWWVYIDLVEEKYQ-EQLTSAFQSFIELAKPKSLVKDSSWKRYIRICVRYL 366
+K++P++Y W+ Y+ LVE + E + ++ I P + + WKRYI + + Y
Sbjct: 472 VKANPHNYDAWFDYLRLVESDAEAEAVREVYERAIANVPP--IQEKRHWKRYIYLWINYA 529
Query: 367 VYLELTINDLPTIRSVYQDILDIIPHKKFTFGKLWIMYAEFEIRQNNLLKARKILGVSLG 426
+Y EL D R VYQ L++IPHKKFTF K+WI+YA+FEIRQ NL AR+ LG S+G
Sbjct: 530 LYEELEAKDPERTRQVYQASLELIPHKKFTFAKMWILYAQFEIRQKNLSLARRALGTSIG 589
Query: 427 KSPKPKVFKYYINLEIRLKEFDRVRKLYEKYIDFNPSSVQSWLDYAELEENLGDEDRSRG 486
K PK K+FK YI LE++L+EFDR RKLYEK+++F P + SW+ +AELE LGD DR+R
Sbjct: 590 KCPKNKLFKVYIELELQLREFDRCRKLYEKFLEFGPENCTSWIKFAELETILGDIDRARA 649
Query: 487 IYDISMSN-NVGLSESDQLIVIQRYIAFETDAAEYEKARELYEKYLILSRYDVNIWINQA 545
IY++++S + + E ++ + YI FE + E E+ R LY + L +++ V +WI+ A
Sbjct: 650 IYELAISQPRLDMPE----VLWKSYIDFEIEQEETERTRNLYRRLLQRTQH-VKVWISFA 704
Query: 546 LFESTIPTETQLIAYQQSHQXXXXXXXXXXXXXXXITPENKHHTRAIFEKAISYFKEHNE 605
FE + E L +Q I+E+A + E
Sbjct: 705 QFELSSGKEGSLTKCRQ-----------------------------IYEEANKTMRNCEE 735
Query: 606 DKKRQQVLQSLLEYEKVHGNQETLEKVNARQPSLV--REKVTIDNIE----QESYKLDFP 659
++R +L+S +E+ G E+V+ P V R KV D+ +E + FP
Sbjct: 736 KEERLMLLESWRSFEEEFGTASDKERVDKLMPEKVKKRRKVQTDDGSDAGWEEYFDYIFP 795
Query: 660 DDRVAQPPIARNLLALAKQWEK 681
+D QP + LLA+AK W+K
Sbjct: 796 EDAANQPNL--KLLAMAKLWKK 815
>7290299 [D] KOG1915 Cell cycle control protein (crooked neck)
Length = 702
Score = 442 bits (1137), Expect = e-124
Identities = 242/681 (35%), Positives = 406/681 (59%), Gaps = 47/681 (6%)
Query: 11 ITADNILKDAFSQKKQIAATT-KADILDLEELKDWQRRKRTEYETVLKRNRLDLRQWMRY 69
ITA+ +L++A + +I K I D EL D+Q+RKR +E L++NR+ + W++Y
Sbjct: 23 ITAEQLLREAKERDLEILPPPPKQKISDPAELADYQQRKRKTFEDNLRKNRMVVSHWIKY 82
Query: 70 AQFEFDQKDIRRARSIYERALLVDHGFIPLWIQYIDSEIKWKNINHARNLLDRATNALPR 129
AQ+E Q++I+RARSI+ERAL +H + LW++Y + E+K K +NHARNL DRA +PR
Sbjct: 83 AQWEEQQQEIQRARSIWERALDNEHRNVTLWLKYAEMEMKNKQVNHARNLWDRAVTIMPR 142
Query: 130 VDKLWFKYLLLEESLGNQGIVRGIYTRWCSFEPGPDAWDSFIEFETRCLNFENVRNIYSK 189
V++ W+KY +EE L N R ++ RW ++P AW +++ FE R + R IY +
Sbjct: 143 VNQFWYKYTYMEEMLENVAGARQVFERWMEWQPEEQAWQTYVNFELRYKEIDRAREIYER 202
Query: 190 FVLVHPQIDTWLKWVRFEQTHGDISSVRTVFSFALDTLTSFSGTPLVDIERVIGSFASWE 249
FV VHP + W+K+ RFE++HG I R VF A++ F G ++ ER+ +FA +E
Sbjct: 203 FVYVHPDVKNWIKFARFEESHGFIHGSRRVFERAVE----FFGDDYIE-ERLFIAFARFE 257
Query: 250 ASQGEYERSRTLYRLAVERWP--ISEALKEQQIQFEKKFGSSKNMEDIVIAKRKAEYEQY 307
Q E++R+R +Y+ A++ P ++ L + + EKK+G +ED++++KRK +YEQ
Sbjct: 258 EGQKEHDRARIIYKYALDHLPKDRTQELFKAYTKHEKKYGDRAGIEDVIVSKRKYQYEQE 317
Query: 308 LKSDPYHYSTWWVYIDLVE-EKYQEQLTSAFQSFIELAKPKSLVKDSSWKRYIRICVRYL 366
+ ++P +Y W+ Y+ L+E E ++Q+ ++ I P + + + W+RYI + + Y
Sbjct: 318 VAANPTNYDAWFDYLRLIEAEGDRDQIRETYERAISNVPPAN--EKNFWRRYIYLWINYA 375
Query: 367 VYLELTINDLPTIRSVYQDILDIIPHKKFTFGKLWIMYAEFEIRQNNLLKARKILGVSLG 426
+Y EL D R +Y+ L++IPHK+FTF KLW++YA+FEIR L +ARK LG+++G
Sbjct: 376 LYEELEAEDAERTRQIYKTCLELIPHKQFTFSKLWLLYAQFEIRCKELQRARKALGLAIG 435
Query: 427 KSPKPKVFKYYINLEIRLKEFDRVRKLYEKYIDFNPSSVQSWLDYAELEENLGDEDRSRG 486
P+ K+F+ YI+LEI+L+EF+R R LYEK+++F P + +W+ +AELE LGD DR+R
Sbjct: 436 MCPRDKLFRGYIDLEIQLREFERCRMLYEKFLEFGPENCVTWMKFAELENLLGDTDRARA 495
Query: 487 IYDISMSN-NVGLSESDQLIVIQRYIAFETDAAEYEKARELYEKYLILSRYDVNIWINQA 545
I+++++ + + E ++ + YI FE E E AR+LYE+ L +++ V +W++ A
Sbjct: 496 IFELAVQQPRLDMPE----LLWKAYIDFEVALGETELARQLYERLLERTQH-VKVWMSFA 550
Query: 546 LFESTIPTETQLIAYQQSHQXXXXXXXXXXXXXXXITPENKHHTRAIFEKAISYFKEHNE 605
FE + SH N R I+E+A ++ +
Sbjct: 551 KFEMGL-----------SHGDSGPDAEL-----------NVQLARRIYERANEMLRQLGD 588
Query: 606 DKKRQQVLQSLLEYEKVHGNQETLEKVNARQPSLV--REKVTIDN-IE---QESYKLDFP 659
+ R +L++ ++E+ + + ++KV + P + R+K+ DN +E +E + FP
Sbjct: 589 KESRVLLLEAWRDFERDASDSQEMQKVMDKMPRRIKKRQKIVSDNGVEEGWEEVFDYIFP 648
Query: 660 DDRVAQPPIARNLLALAKQWE 680
+D +A+P + LLA AK W+
Sbjct: 649 EDEMARPNL--KLLAAAKMWK 667
>CE28622 [D] KOG1915 Cell cycle control protein (crooked neck)
Length = 744
Score = 434 bits (1116), Expect = e-121
Identities = 247/684 (36%), Positives = 399/684 (58%), Gaps = 60/684 (8%)
Query: 11 ITADNILKDAFSQKKQ-IAATTKADILDLEELKDWQRRKRTEYETVLKRNRLDLRQWMRY 69
ITA+ +L++A ++ + I K I D +ELK++QR+KR E+E +++NR+ L W++Y
Sbjct: 33 ITAEQLLREAKERELELIPPAPKTKITDPDELKEYQRKKRKEFEDGIRKNRMQLANWIKY 92
Query: 70 AQFEFDQKDIRRARSIYERALLVDHGFIPLWIQYIDSEIKWKNINHARNLLDRATNALPR 129
++E +I+RARS++ERAL VDH I +W+QY + E++ K INHARN+ DRA +PR
Sbjct: 93 GKWEESIGEIQRARSVFERALDVDHRSISIWLQYAEMEMRCKQINHARNVFDRAITIMPR 152
Query: 130 VDKLWFKYLLLEESLGNQGIVRGIYTRWCSFEPGPDAWDSFIEFETRCLNFENVRNIYSK 189
+ W KY +EE + N R I+ RW +EP AW ++I FE R + R++Y +
Sbjct: 153 AMQFWLKYSYMEEVIENIPGARQIFERWIEWEPPEQAWQTYINFELRYKEIDRARSVYQR 212
Query: 190 FVLVHP-QIDTWLKWVRFEQTHGDISSVRTVFSFALDTLTSFSGTPLVDIERVIGSFASW 248
F+ VH + W+K+ +FE+ +G I + R + A++ + G ++ E V+ +FA +
Sbjct: 213 FLHVHGINVQNWIKYAKFEERNGYIGNARAAYEKAME----YFGEEDIN-ETVLVAFALF 267
Query: 249 EASQGEYERSRTLYRLAVERWPIS--EALKEQQIQFEKKFGSSKNMEDIVIAKRKAEYEQ 306
E Q E+ER+R +++ ++ P + E + + Q EKKFG +ED++I+KRK +YE+
Sbjct: 268 EERQKEHERARGIFKYGLDNLPSNRTEEIFKHYTQHEKKFGERVGIEDVIISKRKTQYEK 327
Query: 307 YLKSDPYHYSTWWVYIDLVE--EKYQEQLTSAFQSFIELAKPKSLVKDSSWKRYIRICVR 364
++ + Y+Y W+ Y+ L+E E +E++ ++ I P S + W+RYI + +
Sbjct: 328 MVEENGYNYDAWFDYLRLLENEETDREEVEDVYERAIANIPPHS--EKRYWRRYIYLWIN 385
Query: 365 YLVYLELTINDLPTIRSVYQDILDIIPHKKFTFGKLWIMYAEFEIRQNNLLKARKILGVS 424
Y +Y EL D R VY+ +DIIPHK FTF K+WIM+A FEIRQ +L ARKI+GV+
Sbjct: 386 YALYEELVAKDFDRARQVYKACIDIIPHKTFTFAKVWIMFAHFEIRQLDLNAARKIMGVA 445
Query: 425 LGKSPKPKVFKYYINLEIRLKEFDRVRKLYEKYIDFNPSSVQSWLDYAELEENLGDEDRS 484
+GK PK K+F+ YI+LE++L+EFDR RKLYEK+++ +P S Q+W+ +AELE LGD DRS
Sbjct: 446 IGKCPKDKLFRAYIDLELQLREFDRCRKLYEKFLESSPESSQTWIKFAELETLLGDTDRS 505
Query: 485 RGIYDISMSN-NVGLSESDQLIVIQRYIAFETDAAEYEKARELYEKYLILSRYDVNIWIN 543
R ++ I++ + + E ++ + YI FE E+EKAR+LYE L + + + +WI+
Sbjct: 506 RAVFTIAVQQPALDMPE----LLWKAYIDFEIACEEHEKARDLYETLLQRTNH-IKVWIS 560
Query: 544 QALFESTIPTETQLIAYQQSHQXXXXXXXXXXXXXXXITPENKHHTRAIFEKAISYFKEH 603
A FE TI N R FE+A + E+
Sbjct: 561 MAEFEQTI--------------------------------GNFEGARKAFERA-NQSLEN 587
Query: 604 NEDKKRQQVLQSLLEYEKVHGNQETLEKVNARQPSLVREK---VTIDNIE---QESYKLD 657
E ++R +L++ E E G+QE L++V P V+++ T D ++ +E +
Sbjct: 588 AEKEERLMLLEAWKECETKSGDQEALKRVETMMPRRVKKRRQIQTEDGVDAGWEEYFDYI 647
Query: 658 FPDDRVAQPPIARNLLALAKQWEK 681
FP D+ A+ LL A +W++
Sbjct: 648 FPQDQAAKGSF--KLLEAAARWKR 669
>At5g45990 [D] KOG1915 Cell cycle control protein (crooked neck)
Length = 673
Score = 384 bits (987), Expect = e-106
Identities = 219/680 (32%), Positives = 383/680 (56%), Gaps = 48/680 (7%)
Query: 11 ITADNILKDAFSQKKQIAATTKADILDLEELKDWQRRKRTEYETVLKRNRLDLRQWMRYA 70
ITA+ IL++A +++ K I D EL D++ R+R E+E ++R R +++ W++YA
Sbjct: 26 ITAEQILREARERQEAEIRPPKQKITDSTELSDYRLRRRKEFEDQIRRARWNIQVWVKYA 85
Query: 71 QFEFDQKDIRRARSIYERALLVDHGFIPLWIQYIDSEIKWKNINHARNLLDRATNALPRV 130
++E Q D RARS++ERAL ++ LW++Y + E+K K +N+ARN+ DR+ LPRV
Sbjct: 86 KWEESQMDYARARSVWERALEGEYRNHTLWVKYAEFEMKNKFVNNARNVWDRSVTLLPRV 145
Query: 131 DKLWFKYLLLEESLGNQGIVRGIYTRWCSFEPGPDAWDSFIEFETRCLNFENVRNIYSKF 190
D+LW KY+ +EE LGN R I+ RW ++ P AW FI+FE R E R+IY +F
Sbjct: 146 DQLWEKYIYMEEKLGNVTGARQIFERWMNWSPDQKAWLCFIKFELRYNEIERARSIYERF 205
Query: 191 VLVHPQIDTWLKWVRFEQTH-GDISSVRTVFSFALDTLTSFSGTPLVDIERVIGSFASWE 249
VL HP++ ++++ +FE G + R V+ A+D L + + E + SFA +E
Sbjct: 206 VLCHPKVSAFIRYAKFEMKRGGQVKLAREVYERAVDKLANDE-----EAEILFVSFAEFE 260
Query: 250 ASQGEYERSRTLYRLAVE--RWPISEALKEQQIQFEKKFGSSKNMEDIVIAKRKAEYEQY 307
E ER+R +Y+ A++ R +E L ++ + FEK++G + +ED ++ K++ EYE
Sbjct: 261 ERCKEVERARFIYKFALDHIRKGRAEELYKKFVAFEKQYGDKEGIEDAIVGKKRFEYEDE 320
Query: 308 LKSDPYHYSTWWVYIDLVEE-KYQEQLTSAFQSFIELAKPKSLVKDSSWKRYIRICVRYL 366
+ +P +Y +W+ Y+ L E ++++ ++ I P + W+RYI + + Y
Sbjct: 321 VSKNPLNYDSWFDYVRLEESVGNKDRIREIYERAIANVPPAQ--EKRFWQRYIYLWINYA 378
Query: 367 VYLELTINDLPTIRSVYQDILDIIPHKKFTFGKLWIMYAEFEIRQNNLLKARKILGVSLG 426
+Y E+ D+ R VY++ L +IPH KF+F K+W++ AE+EIRQ NL AR+ILG ++G
Sbjct: 379 LYEEIETKDVERTRDVYRECLKLIPHTKFSFAKIWLLAAEYEIRQLNLTGARQILGNAIG 438
Query: 427 KSPKPKVFKYYINLEIRLKEFDRVRKLYEKYIDFNPSSVQSWLDYAELEENLGDEDRSRG 486
K+PK K+FK YI +E++L DR RKLYE++++++P + +W +YAE E +L + +R+R
Sbjct: 439 KAPKVKIFKKYIEMELKLVNIDRCRKLYERFLEWSPENCYAWRNYAEFEISLAETERARA 498
Query: 487 IYDISMSN-NVGLSESDQLIVIQRYIAFETDAAEYEKARELYEKYLILSRYDVNIWINQA 545
I+++++S + + E ++ + YI FE E+EK R LYE+ L +++ +WI+ A
Sbjct: 499 IFELAISQPALDMPE----LLWKTYIDFEISEGEFEKTRALYERLLDRTKH-CKVWISFA 553
Query: 546 LFESTIPTETQLIAYQQSHQXXXXXXXXXXXXXXXITPENKHHTRAIFEKAISYFKEHNE 605
FE++ + + R IF++A +Y+K+
Sbjct: 554 KFEASASEHKE---------------------------DGIKSARVIFDRANTYYKDTTP 586
Query: 606 --DKKRQQVLQSLLEYEKVHGNQETLEKVNARQPSLVREKVTIDNIEQESYKLDFPDDRV 663
+++R +L+ L E G + V ++ P ++++ + + ++ D
Sbjct: 587 ELEEERATLLEDWLNMETGFGELGDVSVVQSKLPKKLKKRKMTSREDGSTEYEEYFDYLF 646
Query: 664 AQPPIARNL--LALAKQWEK 681
+ NL L A +W+K
Sbjct: 647 PEESGTTNLKILEAAYKWKK 666
>At5g41770 [D] KOG1915 Cell cycle control protein (crooked neck)
Length = 665
Score = 352 bits (903), Expect = 1e-96
Identities = 212/679 (31%), Positives = 365/679 (53%), Gaps = 56/679 (8%)
Query: 11 ITADNILKDAFSQKKQIAATTKADILDLEELKDWQRRKRTEYETVLKRNRLDLRQWMRYA 70
ITA+ IL++A +++ K I D EL D++ R+R E+E ++R R +++ W++YA
Sbjct: 26 ITAEQILREARERQEAEIRPPKQKITDSTELSDYRLRRRKEFEDQIRRARWNIQVWVKYA 85
Query: 71 QFEFDQKDIRRARSIYERALLVDHGFIPLWIQYIDSEIKWKNINHARNLLDRATNALPRV 130
Q+E QKD RARS++ERA+ D+ LW++Y + E+K K +N ARN+ DRA LPRV
Sbjct: 86 QWEESQKDYARARSVWERAIEGDYRNHTLWLKYAEFEMKNKFVNSARNVWDRAVTLLPRV 145
Query: 131 DKLWFKYLLLEESLGNQGIVRGIYTRWCSFEPGPDAWDSFIEFETRCLNFENVRNIYSKF 190
D+LW+KY+ +EE LGN R I+ RW + P W SFI+FE R E R IY +F
Sbjct: 146 DQLWYKYIHMEEILGNIAGARQIFERWMDWSPDQQGWLSFIKFELRYNEIERARTIYERF 205
Query: 191 VLVHPQIDTWLKWVRFEQTHGDISSVRTVFSFALDTLTSFSGTPLVDIERVIGSFASWEA 250
VL HP++ ++++ +FE G+++ R+V+ A + L + E + +FA +E
Sbjct: 206 VLCHPKVSAYIRYAKFEMKGGEVARCRSVYERATEKLADDE-----EAEILFVAFAEFEE 260
Query: 251 SQGEYERSRTLYRLAVERWP--ISEALKEQQIQFEKKFGSSKNMEDIVIAKRKAEYEQYL 308
E ER+R +Y+ A++ P +E L + + FEK++G + +ED ++ KR+ +YE +
Sbjct: 261 RCKEVERARFIYKFALDHIPKGRAEDLYRKFVAFEKQYGDKEGIEDAIVGKRRFQYEDEV 320
Query: 309 KSDPYHYSTWWVYIDLVEE-KYQEQLTSAFQSFIELAKPKSLVKDSSWKRYIRICVRYLV 367
+ P +Y +W+ Y+ L E ++++ ++ I P + W+RYI + + Y +
Sbjct: 321 RKSPSNYDSWFDYVRLEESVGNKDRIREIYERAIANVPPAE--EKRYWQRYIYLWINYAL 378
Query: 368 YLELTINDLPTIRSVYQDILDIIPHKKFTFGKLWIMYAEFEIRQNNLLKARKILGVSLGK 427
+ E+ D+ R VY RQ NL AR+ILG ++GK
Sbjct: 379 FEEIETEDIERTRDVY--------------------------RQLNLTGARQILGNAIGK 412
Query: 428 SPKPKVFKYYINLEIRLKEFDRVRKLYEKYIDFNPSSVQSWLDYAELEENLGDEDRSRGI 487
+PK K+FK YI +E++L DR RKLYE+Y++++P + +W YAELE +L + +R+R I
Sbjct: 413 APKDKIFKKYIEIELQLGNMDRCRKLYERYLEWSPENCYAWSKYAELERSLVETERARAI 472
Query: 488 YDISMSN-NVGLSESDQLIVIQRYIAFETDAAEYEKARELYEKYLILSRYDVNIWINQAL 546
+++++S + + E ++ + YI FE E E+ R LYE+ L +++ +W++ A
Sbjct: 473 FELAISQPALDMPE----LLWKAYIDFEISEGELERTRALYERLLDRTKH-YKVWVSFAK 527
Query: 547 FESTIPTETQLIAYQQSHQXXXXXXXXXXXXXXXITPENKHHTRAIFEKAISYFKEHNED 606
FE++ E + + Q + RAIF++A +Y+K+ +
Sbjct: 528 FEAS-AAELEEDENEDEDQEEDVIEH---------KKDCIKRARAIFDRANTYYKDSTPE 577
Query: 607 KK--RQQVLQSLLEYEKVHGNQETLEKVNARQPSLVREKVTIDNIEQESYKLDFPDDRVA 664
K R +L+ L E GN + V ++ P ++++ I + + ++ D
Sbjct: 578 LKEERATLLEDWLNMESSFGNLGDVSIVQSKLPKKLKKRKAITREDGSTEYEEYIDYLYP 637
Query: 665 QPPIARNL--LALAKQWEK 681
+ NL L A +W+K
Sbjct: 638 EESQTTNLKILEAAYKWKK 656
>At3g13210 [D] KOG1915 Cell cycle control protein (crooked neck)
Length = 657
Score = 325 bits (833), Expect = 1e-88
Identities = 199/682 (29%), Positives = 348/682 (50%), Gaps = 83/682 (12%)
Query: 11 ITADNILKDAFSQKKQIAATTKADILDLEELKDWQRRKRTEYETVLKRNRLDLRQWMRYA 70
ITA+ IL++A +++ I D EL D++ R+R E+E ++R RL+ +
Sbjct: 39 ITAEQILREARERQEAEFRPPNQTITDSAELSDYRLRRRKEFEDQIRRARLNTQ------ 92
Query: 71 QFEFDQKDIRRARSIYERALLVDHGFIPLWIQYIDSEIKWKNINHARNLLDRATNALPRV 130
+W++Y D E+K K++N ARN+ DRA + LPRV
Sbjct: 93 ----------------------------VWVKYADFEMKNKSVNEARNVWDRAVSLLPRV 124
Query: 131 DKLWFKYLLLEESLGNQGIVRGIYTRWCSFEPGPDAWDSFIEFETRCLNFENVRNIYSKF 190
D+LW+K++ +EE LGN R I RW P AW FI+FE + E R+IY +F
Sbjct: 125 DQLWYKFIHMEEKLGNIAGARQILERWIHCSPDQQAWLCFIKFELKYNEIECARSIYERF 184
Query: 191 VLVHPQIDTWLKWVRFEQTHGDISSVRTVFSFALDTLTSFSGTPLVDIERVIGSFASWEA 250
VL HP++ ++++ +FE HG + VF A L + E + +FA +E
Sbjct: 185 VLCHPKVSAYIRYAKFEMKHGQVELAMKVFERAKKELADDE-----EAEILFVAFAEFEE 239
Query: 251 SQGEYERSRTLYRLAVERWPISEA--LKEQQIQFEKKFGSSKNMEDIVIAKRKAEYEQYL 308
Y+ A+++ P A L + + FEK+ G + +ED +I KR+ +YE +
Sbjct: 240 Q----------YKFALDQIPKGRAENLYSKFVAFEKQNGDKEGIEDAIIGKRRCQYEDEV 289
Query: 309 KSDPYHYSTWWVYIDLVEEK-YQEQLTSAFQSFIELAKPKSLVKDSSWKRYIRICVRYLV 367
+ +P +Y +W+ ++ L E ++++ ++ + P + W+RYI + + Y
Sbjct: 290 RKNPLNYDSWFDFVRLEETVGNKDRIREIYERAVANVPPPEAQEKRYWQRYIYLWINYAF 349
Query: 368 YLELTINDLPTIRSVYQDILDIIPHKKFTFGKLWIMYAEFEIRQNNLLKARKILGVSLGK 427
+ E+ D+ + R VY+ L +IPH KF+F K+W++ A+ EIRQ NL AR+ILG ++GK
Sbjct: 350 FAEMVTEDVESTRDVYRACLKLIPHSKFSFAKIWLLAAQHEIRQLNLTGARQILGNAIGK 409
Query: 428 SPKPKVFKYYINLEIRLKEFDRVRKLYEKYIDFNPSSVQSWLDYAELEENLGDEDRSRGI 487
+PK K+FK YI +E++L+ DR RKLYE+Y++++P + +W YAE E +L + +R+R I
Sbjct: 410 APKDKIFKKYIEIELQLRNIDRCRKLYERYLEWSPGNCYAWRKYAEFEMSLAETERTRAI 469
Query: 488 YDISMSN-NVGLSESDQLIVIQRYIAFETDAAEYEKARELYEKYLILSRYDVNIWINQAL 546
+++++S + + E ++ + YI FE E E+ R LYE+ L +++ +W++ A
Sbjct: 470 FELAISQPALDMPE----LLWKTYIDFEISEGELERTRALYERLLDRTKH-CKVWVDFAK 524
Query: 547 FESTIPTETQLIAYQQSHQXXXXXXXXXXXXXXXITPENKHHTRAIFEKAISYFKEHNED 606
FE++ + + + + + R IF++A +Y K+ +
Sbjct: 525 FEASAAEHKEDEEEEDAIER---------------KKDGIKRAREIFDRANTYNKDSTPE 569
Query: 607 KK--RQQVLQSLLEYEKVHGNQETLEKVNARQPSLVREKVTIDN----IEQESY-KLDFP 659
K R +L+ L E G + V ++ P V+++ E E Y FP
Sbjct: 570 LKEERAMLLEDWLNMETGFGKLGDVRVVQSKLPKKVKKRKLSSREDGCTEYEEYTDYLFP 629
Query: 660 DDRVAQPPIARNLLALAKQWEK 681
++ + +L A +W+K
Sbjct: 630 EE---SETTSLKILEAAHKWKK 648
>At3g51110 [D] KOG1915 Cell cycle control protein (crooked neck)
Length = 599
Score = 305 bits (782), Expect = 1e-82
Identities = 177/534 (33%), Positives = 300/534 (56%), Gaps = 54/534 (10%)
Query: 11 ITADNILKDAFSQK-KQIAATTKADILDLEELKDWQRRKRTEYETVLKRNRLDLRQWMRY 69
ITA+ +LK+A ++ +I K I D +EL +++ R+R E+E ++ + + + W+RY
Sbjct: 12 ITAEQVLKEAREREDSRILRPPKQKITDSDELAEYRLRRRKEFEDQIRGAKTNSQVWVRY 71
Query: 70 AQFEFDQKDIRRARSIYERALLVDHGFI--PLWIQYIDSEIKWKNINHARNLLDRATNAL 127
A +E QKD RARS++ERAL D + LW++Y + E++ K++NHARN+ DRA L
Sbjct: 72 ADWEESQKDHDRARSVWERAL-EDESYRNHTLWLKYAEFEMRNKSVNHARNVWDRAVKIL 130
Query: 128 PRVDKLWFKYLLLEESLGNQGIVRGIYTRWCSFEPGPDAWDSFIEFETRCLNFENVRNIY 187
PRVD+ W+KY+ +EE LGN R I+ RW + P AW FI+FE R E R+IY
Sbjct: 131 PRVDQFWYKYIHMEEILGNIDGARKIFERWMDWSPDQQAWLCFIKFELRYNEIERSRSIY 190
Query: 188 SKFVLVHPQIDTWLKWVRFEQTHGDISSVRTVFSFALDTLTSFSGTPLVDIERVIGSFAS 247
+FVL HP+ +++++ +FE + +S R V+ A++ L + E + +FA
Sbjct: 191 ERFVLCHPKASSFIRYAKFEMKNSQVSLARIVYERAIEMLKDVE----EEAEMIFVAFAE 246
Query: 248 WEASQGEYERSRTLYRLAVERWP--ISEALKEQQIQFEKKFGSSKNMEDIVIAKRKAEYE 305
+E E ER+R LY+ A++ P +E L ++ + FEK++G+ + ++D ++ +RK +YE
Sbjct: 247 FEELCKEVERARFLYKYALDHIPKGRAEDLYKKFVAFEKQYGNKEGIDDAIVGRRKLQYE 306
Query: 306 QYLKSDPYHYSTWWVYIDLVE-----EKYQEQLTSAFQSFIELAKPKSLVKDSSWKRYIR 360
++ +P +Y +W+ YI L E ++ +E A + + LA+ K W+RYI
Sbjct: 307 GEVRKNPLNYDSWFDYISLEETLGDKDRIREVYERAIAN-VPLAEEKRY-----WQRYIY 360
Query: 361 ICVRYLVYLELTINDLPTIRSVYQDILDIIPHKKFTFGKLWIMYAEFEIRQNNLLKARKI 420
+ + Y ++ E+ D+ R+V Q NL AR+I
Sbjct: 361 LWIDYALFEEILAEDVERTRAV----------------------------QLNLSGARRI 392
Query: 421 LGVSLGKSPKPKVFKYYINLEIRLKEFDRVRKLYEKYIDFNPSSVQSWLDYAELEENLGD 480
LG ++GK+PK K+FK YI +E+ L DR RKLY +Y++++P S +W +AE E +L +
Sbjct: 393 LGNAIGKAPKHKIFKKYIEIELHLGNIDRCRKLYARYLEWSPESCYAWTKFAEFERSLAE 452
Query: 481 EDRSRGIYDISMSNNVGLSESDQLIVIQRYIAFETDAAE-----YEKARELYEK 529
+R+R I+++++S L + V + FE AA+ E AR ++++
Sbjct: 453 TERARAIFELAISQPRLLDRTKHYKVWLSFAKFEASAAQGQEDTIEHARAVFDR 506
Score = 86.3 bits (212), Expect = 1e-16
Identities = 112/559 (20%), Positives = 222/559 (39%), Gaps = 110/559 (19%)
Query: 200 WLKWVRFEQTHGDISSVRTVFSFALDTLTSFSGTPLVDIERVIGSFASWEASQGEYERSR 259
W+++ +E++ D R+V+ AL+ + + T + +A +E +R
Sbjct: 68 WVRYADWEESQKDHDRARSVWERALEDESYRNHTLWL-------KYAEFEMRNKSVNHAR 120
Query: 260 TLYRLAVERWPISEALKEQQIQFEKKFGSSKNMEDIVIAKRKAEYEQYLKSDPYHYSTWW 319
++ AV+ P + + I E+ G+ I +E+++ P + W
Sbjct: 121 NVWDRAVKILPRVDQFWYKYIHMEEILGNIDGARKI--------FERWMDWSPDQQA--W 170
Query: 320 VYIDLVEEKYQE--QLTSAFQSFIELAKPKSLVKDSSWKRYIRICVRYLVYLELTINDLP 377
+ E +Y E + S ++ F+ L PK+ SS+ RY + E+ + +
Sbjct: 171 LCFIKFELRYNEIERSRSIYERFV-LCHPKA----SSFIRYAKF--------EMKNSQVS 217
Query: 378 TIRSVYQDILDIIPHKKFTFGKLWIMYAEFEIRQNNLLKARKILGVSLGKSPKPK---VF 434
R VY+ ++++ + +++ +AEFE + +AR + +L PK + ++
Sbjct: 218 LARIVYERAIEMLKDVEEEAEMIFVAFAEFEELCKEVERARFLYKYALDHIPKGRAEDLY 277
Query: 435 KYYINLEIRLKEFDRV-------RKL-YEKYIDFNPSSVQSWLDYAELEENLGDEDRSRG 486
K ++ E + + + RKL YE + NP + SW DY LEE LGD+DR R
Sbjct: 278 KKFVAFEKQYGNKEGIDDAIVGRRKLQYEGEVRKNPLNYDSWFDYISLEETLGDKDRIRE 337
Query: 487 IYDISMSN-------------------------------------NVGLSESDQLI---- 505
+Y+ +++N + LS + +++
Sbjct: 338 VYERAIANVPLAEEKRYWQRYIYLWIDYALFEEILAEDVERTRAVQLNLSGARRILGNAI 397
Query: 506 -------VIQRYIAFETDAAEYEKARELYEKYLILSRYDVNIWINQALFESTIPTETQLI 558
+ ++YI E ++ R+LY +YL S W A FE ++ +
Sbjct: 398 GKAPKHKIFKKYIEIELHLGNIDRCRKLYARYLEWSPESCYAWTKFAEFERSLAETERAR 457
Query: 559 AY------------QQSHQXXXXXXXXXXXXXXXITPENKHHTRAIFEKAISYFKEHNED 606
A + H + H RA+F++A +Y+KE +
Sbjct: 458 AIFELAISQPRLLDRTKHYKVWLSFAKFEASAAQGQEDTIEHARAVFDRANTYYKESKPE 517
Query: 607 KK--RQQVLQSLLEYEKVHGNQETLEKVNARQPSLVREKVTIDNIEQESYKLDFPDDRVA 664
K R +L+ L E G+ + V ++ P +++++ I + E+ ++ D
Sbjct: 518 LKEERANLLEDWLNMEASFGD---VSAVQSKLPKKLKKRMPITREDGETEYEEYIDYFFP 574
Query: 665 QPPIARNL--LALAKQWEK 681
+ NL L A +W+K
Sbjct: 575 EESQTMNLKILEAAHKWKK 593
>SPBC211.02c [A] KOG2047 mRNA splicing factor
Length = 790
Score = 68.2 bits (165), Expect = 4e-11
Identities = 120/579 (20%), Positives = 215/579 (36%), Gaps = 110/579 (18%)
Query: 37 DLEELKDWQRRKRTEYETVLKRNRL-----------DLRQWMRYAQFE----------FD 75
D LK W R +T + L++ L + W Y + F
Sbjct: 28 DPYSLKSWLRYIKTHEGSTLEKRVLLFERACSELPGSYKIWKSYLELRVAHVEHLNPYFH 87
Query: 76 QKDIRRARSIYERALLVDHGFIPLWIQYIDSEIKWKNINHARNLLDRATNALP--RVDKL 133
+ +ER+L++ H +W Y+ +K N+ R + A ALP + D +
Sbjct: 88 AEAFASVNDCFERSLILLHKMPVIWKLYLQFLMKQPNVTKIRCTFNSALRALPVTQHDDI 147
Query: 134 WFKYLLLEESLGNQGIVRGIYTRWCSFEPGPDAWDSFIEFETRCLNFENVRNIYSKFVLV 193
W + E +G + +Y R+ EP A +++IE + + Y +L
Sbjct: 148 WDMFTKYAEDIGGLFCIH-VYRRYIQVEPR--AIENYIEILCKLGLWNEAARQYED-ILN 203
Query: 194 HP---------QIDTWLKWVRFEQTHGDISS---VRTVFSFALDTLTSFSGTPLVDIERV 241
P WL++ H D + V VF + + +G ++
Sbjct: 204 RPVFLSAKRKSNYQIWLEFSELVVQHPDHTQNIDVEKVFRAGIKRFSDQAG-------KL 256
Query: 242 IGSFASWEASQGEYERSRTLYR------LAVERWPIS----EALKEQQIQFEKKFGSSKN 291
A + G+YE++R+ + + V + I +EQ + + S
Sbjct: 257 WTYLAQYYIRIGDYEKARSTFYEGMNNIMTVRNFTIIFDAFVEFEEQWLSARVEASSGNA 316
Query: 292 MEDIVIAKRKAEYEQYLKSDPYHYST------------WWVYIDLVEEKYQEQLTSAFQS 339
+++ I A E+ L P + + W + +E+ E++ +
Sbjct: 317 NDELSIDFHMAWLEKILDKRPLYINDVLLRQNINNVDEWLRRVKFLEDD-SEKVVQVYTD 375
Query: 340 FIELAKPKSLVKDSSWKRYIRICVRYLVYLELTINDLPTIRSVYQDILDIIPHKKFT-FG 398
I+ PK L S K + Y + +DL R +++ + P+K
Sbjct: 376 AIKNVNPK-LAHGSLGKLFSEFARFYENF-----DDLEQSRIIFEKATHV-PYKTVNELA 428
Query: 399 KLWIMYAEFEIRQNNLLKARKILG---------------------VSLGKSPKPKVFKYY 437
++WI +AE E+R N ARK++G V L KS K ++ YY
Sbjct: 429 QVWIDWAEMELRHQNFDAARKLIGDAVHAPRKSHISFFDESLSPQVRLHKSSK--IWMYY 486
Query: 438 INLEIRLKEFDRVRKLYEKYIDFNPSSVQSWLDYAE-LEENLGDEDR----SRGIYDISM 492
++LE + + RKLY++ + ++ Q ++YA LEEN ED RG+ S
Sbjct: 487 LDLEESVGTIETTRKLYDRVFELKIATPQVVVNYANLLEENAYFEDSFKIYERGVALFSY 546
Query: 493 SNNVGLSESDQLIVIQRYIAFETDAAEYEKARELYEKYL 531
L ++RY E+ R+L+E+ L
Sbjct: 547 PVAFELWNLYLTKFVKRY-----QGTHMERTRDLFEQAL 580
>YMR229c [A] KOG1070 rRNA processing protein Rrp5
Length = 1729
Score = 59.3 bits (142), Expect = 2e-08
Identities = 53/224 (23%), Positives = 92/224 (40%), Gaps = 27/224 (12%)
Query: 86 YERALLVDHGFIPLWIQYIDSEIKWKNINHARNLLDRA---TNALPRVDKL--WFKYLLL 140
+ER L+ + +W+ Y+ +++ I AR L +RA N +KL W L L
Sbjct: 1464 FERLLIGNPNSSVVWMNYMAFQLQLSEIEKARELAERALKTINFREEAEKLNIWIAMLNL 1523
Query: 141 EESLGNQGIVRGIYTRWCSFEPGPDAWDSFIEFETRCLNFENVRNIYSKFVLVH------ 194
E + G + + +++R C + DS+ T+ L + + K +
Sbjct: 1524 ENTFGTEETLEEVFSRACQY------MDSY-TIHTKLLGIYEISEKFDKAAELFKATAKK 1576
Query: 195 ---PQIDTWLKWVRFEQTHGDISSVRTVFSFALDTLTSFSGTPLVDIERVIGSFASWEAS 251
++ W+ W F +H + RT+ AL L P + V+ FA E +
Sbjct: 1577 FGGEKVSIWVSWGDFLISHNEEQEARTILGNALKAL------PKRNHIEVVRKFAQLEFA 1630
Query: 252 QGEYERSRTLYRLAVERWPISEALKEQQIQFEKKFGSSKNMEDI 295
+G+ ER R+L+ V P L + E K K +ED+
Sbjct: 1631 KGDPERGRSLFEGLVADAPKRIDLWNVYVDQEVKAKDKKKVEDL 1674
>At5g28740 [A] KOG2047 mRNA splicing factor
Length = 917
Score = 58.2 bits (139), Expect = 4e-08
Identities = 62/281 (22%), Positives = 121/281 (42%), Gaps = 45/281 (16%)
Query: 66 WMRYAQFEFDQKDIRRARSIYERALLVDHGFIP----LWIQYIDSEIKWKNINHARNLLD 121
W+ +A+ + KD+ R I+++A+ V++ + +W ++ + E++ KN A L+
Sbjct: 426 WVAFAKLYENHKDLVNTRVIFDKAVQVNYKTVDHLASVWCEWAEMELRHKNFKGALELMR 485
Query: 122 RATNALPRVD---------------------KLWFKYLLLEESLGNQGIVRGIYTRWCSF 160
RAT A+P V+ +LW Y+ LEESLG R +Y +
Sbjct: 486 RAT-AVPTVEVRRRVAADGNEPVQMKLHRSLRLWSFYVDLEESLGTLESTRAVYEKILDL 544
Query: 161 E-PGPDAWDSFIEFETRCLNFENVRNIYSKFVLV--HPQI-DTWLKWV-RFEQTHG--DI 213
P ++ FE+ +Y + V + +P + D W+ ++ +F + +G +
Sbjct: 545 RIATPQIIMNYAFLLEENKYFEDAFKVYERGVKIFKYPHVKDIWVTYLTKFVKRYGKTKL 604
Query: 214 SSVRTVFSFALDTLTSFSGTPLVDIERVIGSFASWEASQGEYERSRTLYRLAVERWPISE 273
R +F A+ S P + + +A E G +R+ +Y A ++ P +
Sbjct: 605 ERARELFEHAV------SMAPSDAVRTLYLQYAKLEEDYGLAKRAMKVYEEATKKVPEGQ 658
Query: 274 ALKEQQIQFEKKFGSSKNMEDIVIAKRKAEYEQYLKSDPYH 314
L+ +I S+ E + + + YEQ ++S H
Sbjct: 659 KLEMYEIYI------SRAAEIFGVPRTREIYEQAIESGLPH 693
Score = 51.2 bits (121), Expect = 5e-06
Identities = 74/337 (21%), Positives = 133/337 (38%), Gaps = 51/337 (15%)
Query: 167 WDSFIEFETRCLNFENVRNIYSKFVLVHPQI-----DTWLKWVRFEQTHGDISSVRTVFS 221
W +F + + N R I+ K V V+ + W +W E H + F
Sbjct: 426 WVAFAKLYENHKDLVNTRVIFDKAVQVNYKTVDHLASVWCEWAEMELRHKN-------FK 478
Query: 222 FALDTLTSFSGTPLVDIERVIGSFASWEASQGEYERSRTLYRLAVERWPISEALKEQQIQ 281
AL+ + + P V++ R + + + E Q + RS L+ V+
Sbjct: 479 GALELMRRATAVPTVEVRRRVAADGN-EPVQMKLHRSLRLWSFYVD-------------- 523
Query: 282 FEKKFGSSKNMEDIVIAKRKAEYEQYLKSDPYHYSTWWVYIDLVEE-KYQEQLTSAFQSF 340
E+ G+ + +A YE+ L Y L+EE KY E ++
Sbjct: 524 LEESLGT--------LESTRAVYEKILDLRIATPQIIMNYAFLLEENKYFEDAFKVYERG 575
Query: 341 IELAKPKSLVKDSSWKRYIRICVRYLVYLELTINDLPTIRSVYQDILDIIPHKKFTFGKL 400
+++ K VKD W Y+ V+ L R +++ + + P L
Sbjct: 576 VKIFKYPH-VKDI-WVTYLTKFVK-----RYGKTKLERARELFEHAVSMAPSDAVR--TL 626
Query: 401 WIMYAEFEIRQNNLLKARKILGVSLGKSP---KPKVFKYYINLEIRLKEFDRVRKLYEKY 457
++ YA+ E +A K+ + K P K ++++ YI+ + R R++YE+
Sbjct: 627 YLQYAKLEEDYGLAKRAMKVYEEATKKVPEGQKLEMYEIYISRAAEIFGVPRTREIYEQA 686
Query: 458 IDFNPSSVQ---SWLDYAELEENLGDEDRSRGIYDIS 491
I+ + +AELE +LG+ DR+R +Y S
Sbjct: 687 IESGLPHKDVKIMCIKFAELERSLGEIDRARALYKYS 723
>At3g17040 [R] KOG1124 FOG: TPR repeat
Length = 652
Score = 52.8 bits (125), Expect = 2e-06
Identities = 40/160 (25%), Positives = 70/160 (43%), Gaps = 14/160 (8%)
Query: 66 WMRYAQFEFDQKDIRRARSIYERALLVDHGFIPLWIQYIDSEIKWKNINHARNLLDRATN 125
W +A E ++RRAR +++ A + D + W + + EIK NI+ ARNLL +
Sbjct: 240 WQCWAVLENRLGNVRRARELFDAATVADKKHVAAWHGWANLEIKQGNISKARNLLAKGLK 299
Query: 126 ALPRVDKLWFKYLLLEESLGNQGIVRGIY-------TRWCSFEPGPDAWDSFIEFETRCL 178
R + ++ LLE G R ++ +R C+ +W ++ + E +
Sbjct: 300 FCGRNEYIYQTLALLEAKAGRYEQARYLFKQATICNSRSCA------SWLAWAQLEIQQE 353
Query: 179 NFENVRNIYSKFVLVHPQID-TWLKWVRFEQTHGDISSVR 217
+ R ++ K V P+ W W FE G++ R
Sbjct: 354 RYPAARKLFEKAVQASPKNRFAWHVWGVFEAGVGNVERGR 393
>Hs20544347 [A] KOG1070 rRNA processing protein Rrp5
Length = 1871
Score = 52.4 bits (124), Expect = 2e-06
Identities = 49/254 (19%), Positives = 103/254 (40%), Gaps = 13/254 (5%)
Query: 48 KRTEYETVLKRNRLDLRQWMRYAQFEFDQKDIRRARSIYERALLVDHGFIPLWIQYIDSE 107
K+++ E L++ + + ++ R + D + ++R +L LW+QY+
Sbjct: 1571 KKSKKERELEKQKAE-KELSRIEEALMDPGRQPESADDFDRLVLSSPNSSILWLQYMAFH 1629
Query: 108 IKWKNINHARNLLDRATNALPRVDK-----LWFKYLLLEESLGNQGIVRGIYTRWCSFEP 162
++ I AR + +RA + ++ +W L LE G+Q + ++ R +
Sbjct: 1630 LQATEIEKARAVAERALKTISFREEQEKLNVWVALLNLENMYGSQESLTKVFERAVQYNE 1689
Query: 163 GPDAWDSFIEFETRCLNFENVRNIYSKFV-LVHPQIDTWLKWVRFEQTHGDISSVRTVFS 221
+ + + F+ +Y++ + + W+K+ F ++ V
Sbjct: 1690 PLKVFLHLADIYAKSEKFQEAGELYNRMLKRFRQEKAVWIKYGAFLLRRSQAAASHRVLQ 1749
Query: 222 FALDTLTSFSGTPLVDIERVIGSFASWEASQGEYERSRTLYRLAVERWPISEALKEQQIQ 281
AL+ L P + VI FA E G+ ER++ ++ + +P + I
Sbjct: 1750 RALECL------PSKEHVDVIAKFAQLEFQLGDAERAKAIFENTLSTYPKRTDVWSVYID 1803
Query: 282 FEKKFGSSKNMEDI 295
K GS K++ DI
Sbjct: 1804 MTIKHGSQKDVRDI 1817
>YDR449c [R] KOG2396 HAT (Half-A-TPR) repeat-containing protein
Length = 440
Score = 50.8 bits (120), Expect = 7e-06
Identities = 42/167 (25%), Positives = 72/167 (42%), Gaps = 17/167 (10%)
Query: 47 RKRTEYETVLKRNRLDLRQWMRYAQFEFDQKDIRRARSIYERALLVDHGFIPLWIQYIDS 106
+KRT++E L + +++Y +E + +R R +R L V + +S
Sbjct: 34 KKRTDFEHRLNSRGSSINDYIKYINYESNVNKLRAKRC--KRILQV---------KKTNS 82
Query: 107 EIKWKNINHARNLLDRATNALPRVDKLWFKYLLLEESLGNQGI---VRGIYTRWCSFEP- 162
W + R TN P+ K W YL ++ GNQ + IY + P
Sbjct: 83 LSDWSIQQRIGFIYQRGTNKFPQDLKFWAMYLNYMKARGNQTSYKKIHNIYNQLLKLHPT 142
Query: 163 GPDAWDSFIEFETRC-LNFENVRNIYSKFVLVHPQI-DTWLKWVRFE 207
D W S ++E NF++ RNI+ + +P + W ++V+FE
Sbjct: 143 NVDIWISCAKYEYEVHANFKSCRNIFQNGLRFNPDVPKLWYEYVKFE 189
>7303287 [A] KOG2047 mRNA splicing factor
Length = 883
Score = 50.8 bits (120), Expect = 7e-06
Identities = 66/308 (21%), Positives = 127/308 (40%), Gaps = 36/308 (11%)
Query: 200 WLKWVRFEQTHGDISSVRTVFSFALDTLTSFSGTPLVDIERVIGSFASWEASQGEYERSR 259
W+++ +F + +G + R VF T + D+ V +A E Q ++E +
Sbjct: 397 WVEFAKFYEANGQVEDARVVFERG----TEVEYVKVEDLAAVWCEWAEMELRQQQFEAAL 452
Query: 260 TLYRLA-------VERWPISEALKEQQIQFEKKFGSSKNMEDI--VIAKRKAEYEQYLK- 309
L + A + + +E ++ + + K + ++E+ KA YE+ +
Sbjct: 453 KLMQRATAMPKRKIAYYDDTETVQARLHRSLKVWSMYADLEESFGTFKTCKAVYERIIDL 512
Query: 310 --SDPYHYSTWWVYIDLVEEKYQEQLTSAFQSFIELAKPKSLVKDSSWKRYIRICVRYLV 367
P + ++++ E Y E+ A++ I L K ++ W Y+ ++L
Sbjct: 513 KICTPQIIINYGMFLE--EHNYFEEAYRAYEKGISLFKWPNVY--DIWNSYL---TKFLE 565
Query: 368 YLELTINDLPTIRSVYQDILDIIP--HKKFTFGKLWIMYAEFEIRQNNLLKARKILGVSL 425
T L R +++ LD P H K+ +++YA+ E A + +
Sbjct: 566 RYGGT--KLERARDLFEQCLDQCPPEHAKY----FYLLYAKLEEEHGLARHAMSVYDRAT 619
Query: 426 GKSPKPKVFKYY---INLEIRLKEFDRVRKLYEKYIDFNPSSVQSWL--DYAELEENLGD 480
+ ++F Y I + R R++YEK I+ P + +AELE LG+
Sbjct: 620 SAVKEDEMFDMYNIFIKKAAEIYGLPRTREIYEKAIESLPEQNMRHMCVKFAELETKLGE 679
Query: 481 EDRSRGIY 488
DR+R IY
Sbjct: 680 VDRARAIY 687
>7301703 [A] KOG1258 mRNA processing protein
Length = 1009
Score = 50.8 bits (120), Expect = 7e-06
Identities = 55/210 (26%), Positives = 84/210 (39%), Gaps = 20/210 (9%)
Query: 5 SLSNEAITADNILKDAFSQKKQIAATTKADILDLEELKDWQRRKRTE-----------YE 53
S SN+A ++ LK S+ K+ + D D E+ KD K E Y
Sbjct: 254 SESNDAQPSEKKLKVEESEPKEKKKEKERD-KDKEKDKDKDNNKDKEKERKKLPDLDKYW 312
Query: 54 TVLKRNRLDLRQWMRYAQFEFDQKDIRRARSIYERALLVDHGFIPLWIQYIDSEIKWKNI 113
+K + D W Q+ ++ D AR Y+ L W +Y D E K K I
Sbjct: 313 RAVKEDSTDFTGWTYLLQYVDNESDAEAAREAYDTFLSHYPYCYGYWRKYADYE-KRKGI 371
Query: 114 N-HARNLLDRATNALPRVDKLWFKYLLLEESL--GNQGIVRGIYTRW---CSFEPGPDA- 166
+ + +R A+P LW YL+ +S ++ VR Y R C E D
Sbjct: 372 KANCYKVFERGLEAIPLSVDLWIHYLMHVKSNHGDDETFVRSQYERAVKACGLEFRSDKL 431
Query: 167 WDSFIEFETRCLNFENVRNIYSKFVLVHPQ 196
WD++I +E + V IY + + + Q
Sbjct: 432 WDAYIRWENESKRYHRVVQIYDRLLAIPTQ 461
Database: KOG eukaryal database 04/03
Posted date: Apr 14, 2003 1:07 PM
Number of letters in database: 30,389,216
Number of sequences in database: 60,738
Lambda K H
0.319 0.135 0.399
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 40,751,765
Number of Sequences: 60738
Number of extensions: 1771948
Number of successful extensions: 6377
Number of sequences better than 1.0e-05: 17
Number of HSP's better than 0.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 8
Number of HSP's that attempted gapping in prelim test: 5830
Number of HSP's gapped (non-prelim): 111
length of query: 684
length of database: 30,389,216
effective HSP length: 113
effective length of query: 571
effective length of database: 23,525,822
effective search space: 13433244362
effective search space used: 13433244362
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)