ORF      STATUS       Function Best COG  Functional category                                          Pathways and functional systems
r_klactVI4740   suspect: LH   W     KOG1736  Extracellular structures                                       Glia maturation factor beta

BLASTP 2.2.3 [May-13-2002]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= r_klactVI4740 1651590 1651150 -147 
         (147 letters)

Database: KOG eukaryal database 04/03 
           60,738 sequences; 30,389,216 total letters

Searching..................................................done

Color Key for Alignment Scores:   


                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

YDR063w [W] KOG1736 Glia maturation factor beta                       153   9e-38
SPAC17H9.11 [W] KOG1736 Glia maturation factor beta                    54   6e-08

>YDR063w [W] KOG1736 Glia maturation factor beta
          Length = 149

 Score =  153 bits (386), Expect = 9e-38
 Identities = 78/147 (53%), Positives = 94/147 (63%), Gaps = 2/147 (1%)

Query: 1   MSTIYHFSNETKNQIKKFRTATARXXXXXXXXXXXXXXXXYXXXXXXXXXXXXXXXXXXX 60
           MS +Y    ET+N+IKKFRT+TAR                Y                   
Sbjct: 1   MSNLYKIGTETRNKIKKFRTSTARTDSIKALSIKIEPKPSYEIIVDEDEQEELDEIEDLS 60

Query: 61  --AELLPDNMPRFVLLSYPMTTRDGRKKTPLVLLYWKPATVVSQEWKMLYAGALEMVRAE 118
             AE+LPDN PRFVL +YP TT+DG K+TPLVL+YWKP TVVSQEWKMLYAGALEM+R E
Sbjct: 61  ELAEILPDNSPRFVLTAYPTTTKDGFKQTPLVLVYWKPMTVVSQEWKMLYAGALEMIREE 120

Query: 119 CAVNKYIEVSSGLEDEDDIEELKQEIE 145
           C   K IEVSSGLED+ D+EEL++++E
Sbjct: 121 CGTFKLIEVSSGLEDDSDVEELREQLE 147


>SPAC17H9.11 [W] KOG1736 Glia maturation factor beta
          Length = 141

 Score = 54.3 bits (129), Expect = 6e-08
 Identities = 29/77 (37%), Positives = 42/77 (53%), Gaps = 5/77 (6%)

Query: 61  AELLPDNMPRFVLLSYPMTTRDGRKKTPLVLLYWKPATVVSQEWKMLYAGALEMVRAECA 120
           A+ L +  PRF+L+SYP  T DGR  TPL ++YW+P +    +  M+YA A    +    
Sbjct: 60  ADELSETNPRFILVSYPTKTTDGRLSTPLFMIYWRP-SATPNDLSMIYASAKVWFQDVSQ 118

Query: 121 VNKYIEVSSGLEDEDDI 137
           V+K  E      D +DI
Sbjct: 119 VHKVFEA----RDSEDI 131


  Database: KOG eukaryal database 04/03
    Posted date:  Apr 14, 2003  1:07 PM
  Number of letters in database: 30,389,216
  Number of sequences in database:  60,738
  
Lambda     K      H
   0.316    0.131    0.375 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,293,074
Number of Sequences: 60738
Number of extensions: 192395
Number of successful extensions: 651
Number of sequences better than 1.0e-05: 2
Number of HSP's better than  0.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 648
Number of HSP's gapped (non-prelim): 2
length of query: 147
length of database: 30,389,216
effective HSP length: 96
effective length of query: 51
effective length of database: 24,558,368
effective search space: 1252476768
effective search space used: 1252476768
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)