ORF      STATUS       Function Best COG  Functional category                                          Pathways and functional systems
r_klactVI4835   suspect: LH   S     KOG3830  Function unknown                                               Uncharacterized conserved protein

BLASTP 2.2.3 [May-13-2002]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= r_klactVI4835 1682833 1680302 -844 
         (844 letters)

Database: KOG eukaryal database 04/03 
           60,738 sequences; 30,389,216 total letters

Searching..................................................done

Color Key for Alignment Scores:   


                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SPBC543.04 [S] KOG3830 Uncharacterized conserved protein              159   2e-38

>SPBC543.04 [S] KOG3830 Uncharacterized conserved protein
          Length = 585

 Score =  159 bits (401), Expect = 2e-38
 Identities = 160/675 (23%), Positives = 264/675 (38%), Gaps = 157/675 (23%)

Query: 185 DLLDGSIFQQDTFQDISK---VLNFNTEFVAELCSPRKEMCNTRFEFTVDDLCFLGLPIH 241
           DL D    + + F +++    VL +   F+A + SPR E+CN +FE  VD L FLG P+H
Sbjct: 53  DLDDSDDDENNRFTEVADDTHVLGYEKGFLANMLSPRIELCNQKFEIWVDGLTFLGCPVH 112

Query: 242 ADHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNSVGRNSIGRNRSKTESQGHINDVEEPA 301
                                             +G N     R K  +      VE  A
Sbjct: 113 ----------------------------------IGPNGEWAKRRKPRTT-----VESNA 133

Query: 302 DDENSDYEPSKSEMLNEMYCVPDAENDEFESLQQSINMFQVCFIMN-PKIIEYNERVDDM 360
              +   +P  S      + V  + +      + S+++F V F++N P    Y   V+ M
Sbjct: 134 SSSHLVSKPESSHPSTGSFEVKSSSSKS----RSSMSLFHVVFVLNVPTATVYRPTVNTM 189

Query: 361 YHYVVTRLSLILRYIQGKTGYVTRECVKIMKCKDEVSKHSRYYESLKSPWSKGKYMYERI 420
           Y ++V +L   L+Y Q K  YV  EC+ I+K  ++ S  +  ++   +          +I
Sbjct: 190 YDHIVVKLVTGLKYEQAKRNYVENECIHILKLTEKYSSQNVPFDVYAA----------QI 239

Query: 421 LYESSLARALTKCFNCIHNNEIANLEIDGDKIVSLQIPIKNEFSILPN----------LK 470
            + S+LA  L   +  + N   A LEI+    +SL  P+    + L N          L 
Sbjct: 240 PHHSNLASVLATTYEALINMHTAYLEINQSINLSLLWPMSVSTNTLENYELQVRPSTILA 299

Query: 471 EDAVLRGSFLSSILNESFIGRS-TSLTNEDSDNLYANHXXXXXXXXXXXXEPENIIKGLE 529
              +      SSI  E F+    T L  +D+D +                     +  L+
Sbjct: 300 SQTIFSEEHPSSI--EPFVAPYWTLLLLKDTDTIMKR------------------VPLLQ 339

Query: 530 NASFDNGVTDLLLINLVRQLKPTIRLGQYKLLIKELIDSNDSSYDDQFCETTLKSLCLHL 589
           N+         LL + +  +KP        L   ++ +    S  + F       L  HL
Sbjct: 340 NS---------LLSSFIAIVKPN-------LTFTDIANRLGISVSECFI------LAKHL 377

Query: 590 IYWRHARLILPISSRNTYIVSPLAPISGFSTDDFKHGEYDTLIRQQEVPVNNNDEPSLIY 649
           I+WR A  I P+  RNTY+ SP A +                                  
Sbjct: 378 IHWRKAIAIPPLLIRNTYVTSPTANLFNLE------------------------------ 407

Query: 650 QNKKVFNEKXXXXXXXXXXXQLMSTQKPRPFGHIIPSNEHKSMYLNALAWLMRYGYLTQL 709
           +  K+F ++            ++S  KPRPF  IIPS +H+ +YL  LAWL R  ++ + 
Sbjct: 408 EESKLFKKEFPSLPSLSTFLAILSF-KPRPFASIIPSKDHELVYLEMLAWLCRRNWVYEQ 466

Query: 710 LTFVYVRVDKRIKIAVDEDLEKDNLRSNKHEKSGNFVTGGENYNSSEFDDLEMINDNDFT 769
             ++Y+ V + IK      +E D    N  +                   LE  N  + +
Sbjct: 467 NIYMYILVPEEIKKKAIALIESDESSKNDMQLR---------------KQLEQDNGKE-S 510

Query: 770 IILEPERNTALEKRWLYKCAEALPTDLQTLFRQVVKYFNGKVSLEYIMIKEGIPKNEIKR 829
           II++P   + LE++W+   A     ++  LF  +VKY NG+ +L+ I + EG+P+  ++ 
Sbjct: 511 IIIDPHSASLLEQKWIQIIAYERGPEMAPLFTSIVKYLNGRFALQTIWVAEGLPRKLMRN 570

Query: 830 LLQALGKYIVEVKHW 844
           +L     YI+    W
Sbjct: 571 ILNEYNDYILRWHSW 585


  Database: KOG eukaryal database 04/03
    Posted date:  Apr 14, 2003  1:07 PM
  Number of letters in database: 30,389,216
  Number of sequences in database:  60,738
  
Lambda     K      H
   0.316    0.134    0.386 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 45,498,446
Number of Sequences: 60738
Number of extensions: 1847814
Number of successful extensions: 6103
Number of sequences better than 1.0e-05: 1
Number of HSP's better than  0.0 without gapping: 1
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 6098
Number of HSP's gapped (non-prelim): 4
length of query: 844
length of database: 30,389,216
effective HSP length: 115
effective length of query: 729
effective length of database: 23,404,346
effective search space: 17061768234
effective search space used: 17061768234
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)