ORF STATUS Function Best COG Functional category Pathways and functional systems
r_klactVI4878 good DR KOG1099 Cell cycle control, cell division, chromosome partitioning SAM-dependent methyltransferase/cell division protein FtsJ
r_klactVI4878 good DR KOG1099 General function prediction only SAM-dependent methyltransferase/cell division protein FtsJ
Only best alignment is shown:
BLASTP 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= r_klactVI4878 1696774 1695872 -301
(301 letters)
Database: KOG eukaryal database 04/03
60,738 sequences; 30,389,216 total letters
Searching..................................................done
Color Key for Alignment Scores: 
Score E
Sequences producing significant alignments: (bits) Value
YBR061c [DR] KOG1099 SAM-dependent methyltransferase/cell divisi... 426 e-119
SPAC4F10.03c [DR] KOG1099 SAM-dependent methyltransferase/cell d... 290 2e-78
Hs7110661 [DR] KOG1099 SAM-dependent methyltransferase/cell divi... 254 1e-67
CE23932 [DR] KOG1099 SAM-dependent methyltransferase/cell divisi... 231 1e-60
At5g01230 [DR] KOG1099 SAM-dependent methyltransferase/cell divi... 228 1e-59
7300216 [DR] KOG1099 SAM-dependent methyltransferase/cell divisi... 197 1e-50
7300710 [DR] KOG1099 SAM-dependent methyltransferase/cell divisi... 193 2e-49
ECU09g0920 [DR] KOG1099 SAM-dependent methyltransferase/cell div... 134 1e-31
Hs17017991 [AR] KOG1098 Putative SAM-dependent rRNA methyltransf... 130 2e-30
SPAC1687.11 [AR] KOG1098 Putative SAM-dependent rRNA methyltrans... 130 3e-30
ECU07g1340 [AR] KOG1098 Putative SAM-dependent rRNA methyltransf... 130 3e-30
YCL054w [AR] KOG1098 Putative SAM-dependent rRNA methyltransfera... 128 9e-30
CE23796 [AR] KOG1098 Putative SAM-dependent rRNA methyltransfera... 125 1e-28
CE23795 [AR] KOG1098 Putative SAM-dependent rRNA methyltransfera... 125 1e-28
7293173 [AR] KOG1098 Putative SAM-dependent rRNA methyltransfera... 124 1e-28
At4g25730 [AR] KOG1098 Putative SAM-dependent rRNA methyltransfe... 100 3e-21
Hs7019377 [D] KOG4589 Cell division protein FtsJ 100 4e-21
SPBC2G2.15c [D] KOG4589 Cell division protein FtsJ 78 2e-14
7300552 [D] KOG4589 Cell division protein FtsJ 68 2e-11
CE16052 [D] KOG4589 Cell division protein FtsJ 62 1e-09
7302710 [A] KOG3674 FtsJ-like RNA methyltransferase 51 2e-06
>YBR061c [DR] KOG1099 SAM-dependent methyltransferase/cell division protein
FtsJ
Length = 310
Score = 426 bits (1095), Expect = e-119
Identities = 215/310 (69%), Positives = 245/310 (78%), Gaps = 9/310 (2%)
Query: 1 MGKSSKDKRDLYYRKAKEQGYRARSAXXXXXXXXXXXXXXXA--VRVVDLCAAPGSWSQV 58
MGKSSKDKRDLYYRKAKEQGYRARSA RVVDLCAAPGSWSQV
Sbjct: 1 MGKSSKDKRDLYYRKAKEQGYRARSAFKLLQLNDQFHFLDDPNLKRVVDLCAAPGSWSQV 60
Query: 59 LSRRLFPQS--SDNSDRKIVAVDLQPMSPIDNVITLQADITHPKTLQTITELFEGKKADF 116
LSR+LF +S SD DRKIV+VDLQPMSPI +V TLQADITHPKTL I +LF +KADF
Sbjct: 61 LSRKLFDESPSSDKEDRKIVSVDLQPMSPIPHVTTLQADITHPKTLARILKLFGNEKADF 120
Query: 117 ICSDGAPDVTGLHDLDEYVXXXXXXXXXXXXTCLLRKGGNFVAKIFRGRDIDMLYSQLGY 176
+CSDGAPDVTGLHDLDEYV C+L+KGG FVAKIFRGRDIDMLYSQLGY
Sbjct: 121 VCSDGAPDVTGLHDLDEYVQQQLIMSALQLTACILKKGGTFVAKIFRGRDIDMLYSQLGY 180
Query: 177 LFEKVICAKPRSSRGTSLESFIVCLGYNPPANWEPKLDVNSSVEDFFQGCDIGKLRLEDK 236
LF+K++CAKPRSSRGTSLE+FIVCLGYNPP+NW PKLDVN+SV++FFQGC + KL + DK
Sbjct: 181 LFDKIVCAKPRSSRGTSLEAFIVCLGYNPPSNWTPKLDVNTSVDEFFQGCFLNKLCISDK 240
Query: 237 CPNYHEEPRSIATFIACGGLSSFDSDATYH-----VDTSTPALDPVQSPTNPPYKKALEL 291
+++EE R+IA F+ACG L SFDSDATYH V ++ +LDPVQSPTNPPYKKALEL
Sbjct: 241 LSHWNEEERNIAEFMACGSLQSFDSDATYHDLPSSVAGTSSSLDPVQSPTNPPYKKALEL 300
Query: 292 KRRGKMTRAI 301
KR GK+TR++
Sbjct: 301 KRSGKLTRSV 310
>SPAC4F10.03c [DR] KOG1099 SAM-dependent methyltransferase/cell division protein
FtsJ
Length = 285
Score = 290 bits (742), Expect = 2e-78
Identities = 163/304 (53%), Positives = 191/304 (62%), Gaps = 25/304 (8%)
Query: 1 MGKSSKDKRDLYYRKAKEQGYRARSAXXXXXXXXXXXXXXXAVRVVDLCAAPGSWSQVLS 60
MG+SSKDKRD YYR AKEQG+RARSA A RVVDLCAAPGSWSQVLS
Sbjct: 1 MGRSSKDKRDAYYRLAKEQGWRARSAFKLLQLNEQFNLFEGAKRVVDLCAAPGSWSQVLS 60
Query: 61 RRLFPQ--SSDNSDRK--IVAVDLQPMSPIDNVITLQADITHPKTLQTITELFEGKKADF 116
R L +S +D K IVAVDLQPM+PID V TLQ DITHP TL I F + AD
Sbjct: 61 RELLKNIDTSIAADEKPMIVAVDLQPMAPIDGVCTLQLDITHPNTLSIILSHFGNEPADL 120
Query: 117 ICSDGAPDVTGLHDLDEYVXXXXXXXXXXXXTCLLRKGGNFVAKIFRGRDIDMLYSQLGY 176
+ SDGAPDVTGLHDLDEY+ C+L+ GG FVAKIFRGRD+ +LYSQL
Sbjct: 121 VVSDGAPDVTGLHDLDEYIQAQILLAAFNLAVCVLKPGGKFVAKIFRGRDVSLLYSQLRL 180
Query: 177 LFEKVICAKPRSSRGTSLESFIVCLGYNPPANWEPKLDVNSSVEDFFQGCDIGKLRLEDK 236
+F KV CAKPRSSR +S+ESF+VC +NPP+N++P L V D
Sbjct: 181 MFRKVSCAKPRSSRASSIESFVVCEDFNPPSNFQPDLTKPLCVID--------------- 225
Query: 237 CPNYHEEPRSIATFIACGGLSSFDSDATYHVDTS--TPALDPVQSPTNPPYKKALELKRR 294
N HE IA FIACG L +D+DATY V+ + LD +Q PT PPYK+A+ELK
Sbjct: 226 PTNAHE----IAPFIACGDLDGYDADATYPVEINMKKATLDVIQPPTAPPYKRAIELKHS 281
Query: 295 GKMT 298
M+
Sbjct: 282 KMMS 285
>Hs7110661 [DR] KOG1099 SAM-dependent methyltransferase/cell division protein
FtsJ
Length = 329
Score = 254 bits (648), Expect = 1e-67
Identities = 139/305 (45%), Positives = 184/305 (59%), Gaps = 19/305 (6%)
Query: 1 MGKSSKDKRDLYYRKAKEQGYRARSAXXXXXXXXXXXXXXXAVRVVDLCAAPGSWSQVLS 60
MG++SKDKRD+YYR AKE G+RARSA R VDLCAAPGSWSQVLS
Sbjct: 1 MGRTSKDKRDVYYRLAKENGWRARSAFKLLQLDKEFQLFQGVTRAVDLCAAPGSWSQVLS 60
Query: 61 RRLFPQSSDNSDRKIVAVDLQPMSPIDNVITLQADITHPKTLQTITELFEGKKADFICSD 120
+++ Q S + +VAVDLQ M+P+ V+ +Q DIT T + I + F+G AD + D
Sbjct: 61 QKIGGQGSGH----VVAVDLQAMAPLPGVVQIQGDITQLSTAKEIIQHFKGCPADLVVCD 116
Query: 121 GAPDVTGLHDLDEYVXXXXXXXXXXXXTCLLRKGGNFVAKIFRGRDIDMLYSQLGYLFEK 180
GAPDVTGLHD+DEY+ T +L+ GG FVAKIFRGRD+ +LYSQL F
Sbjct: 117 GAPDVTGLHDVDEYMQAQLLLAALNIATHVLKPGGCFVAKIFRGRDVTLLYSQLQVFFSS 176
Query: 181 VICAKPRSSRGTSLESFIVCLGYNPPANWEPKLDVNSSVEDFFQGCDIGKLRLEDKCPNY 240
V+CAKPRSSR +S+E+F VC GY+PP + P D++ + D D +L
Sbjct: 177 VLCAKPRSSRNSSIEAFAVCQGYDPPEGFIP--DLSKPLLDHSYDPDFNQL--------- 225
Query: 241 HEEPRSIATFIACGGLSSFDSDATYHVD----TSTPALDPVQSPTNPPYKKALELKRRGK 296
R I F+ CG LSS+DSD +Y +D + P Q P +PPY++A LKR+G+
Sbjct: 226 DGPTRIIVPFVTCGDLSSYDSDRSYPLDLEGGSEYKYTPPTQPPISPPYQEACTLKRKGQ 285
Query: 297 MTRAI 301
+ + I
Sbjct: 286 LAKEI 290
>CE23932 [DR] KOG1099 SAM-dependent methyltransferase/cell division protein
FtsJ
Length = 337
Score = 231 bits (589), Expect = 1e-60
Identities = 132/310 (42%), Positives = 176/310 (56%), Gaps = 34/310 (10%)
Query: 1 MGKSSKDKRDLYYRKAKEQGYRARSAXXXXXXXXXXXXXXXAVRVVDLCAAPGSWSQVLS 60
MGK+S+DKRD+YYR AKE +RARSA R VDLCAAPGSWSQVLS
Sbjct: 1 MGKTSRDKRDIYYRLAKENKWRARSAFKLMQIDDEFQILKGVRRAVDLCAAPGSWSQVLS 60
Query: 61 RRLFPQSSDNSDRKIVAVDLQPMSPIDNVITLQADITHPKTLQTITELFEGKKADFICSD 120
+RL+ ++ + KIVA+DLQPM+PI VI LQ DIT T + + F G+K+D + D
Sbjct: 61 KRLY---EEDQEAKIVAIDLQPMAPIPGVIQLQGDITSVDTANQVIKHFSGEKSDIVICD 117
Query: 121 GAPDVTGLHDLDEYVXXXXXXXXXXXXTCLLRKGGNFVAKIFRGRDIDMLYSQLGYLFEK 180
GAPDVTG+H LDE++ + +L++GGNF+AKIFR R+ +LY+Q+ F+K
Sbjct: 118 GAPDVTGIHSLDEFMQAELILAAFNITSHVLKEGGNFLAKIFRSRNSSLLYAQMKKYFKK 177
Query: 181 VICAKPRSSRGTSLESFIVCLGYNPPANWEPKLDVNSSVEDFFQGCDIGKLRLEDKCPNY 240
V AKPRSSR +S E+F++CL Y+PP + P + GK L D
Sbjct: 178 VYLAKPRSSRQSSCEAFVLCLDYSPPEGFVPTM---------------GKTSL-DATDAS 221
Query: 241 HEEPRSIATFIACGGLSSFDSDATYHVDTST---------------PALDPVQSPTNPPY 285
P I F+ CG LS +DS+ +Y +D D VQ PT+P Y
Sbjct: 222 AISPDIIDGFVTCGDLSGWDSEKSYPLDIDACFPKGEIDEEQKKRYEFKDVVQPPTDPAY 281
Query: 286 KKALELKRRG 295
K AL+ K+ G
Sbjct: 282 KAALDKKKSG 291
>At5g01230 [DR] KOG1099 SAM-dependent methyltransferase/cell division protein
FtsJ
Length = 287
Score = 228 bits (580), Expect = 1e-59
Identities = 131/305 (42%), Positives = 179/305 (57%), Gaps = 38/305 (12%)
Query: 1 MGKSSKDKRDLYYRKAKEQGYRARSAXXXXXXXXXXXXXXXAVRVVDLCAAPGSWSQVLS 60
MGK+S+DKRD+YYRKAKE+G+RARSA RVVDLCAAPGSWSQVLS
Sbjct: 1 MGKASRDKRDIYYRKAKEEGWRARSAFKLLQIDEEFNIFEGVKRVVDLCAAPGSWSQVLS 60
Query: 61 RRLFPQSSDNSDRK------IVAVDLQPMSPIDNVITLQADITHPKTLQTITELFEGKKA 114
R+L+ + +++ K IVA+DLQPM+PI+ VI +Q DIT+ +T + + F+G KA
Sbjct: 61 RQLYLPAKSSAESKDGDLPLIVAIDLQPMAPIEGVIQVQGDITNARTAEVVIRHFDGCKA 120
Query: 115 DFICSDGAPDVTGLHDLDEYVXXXXXXXXXXXXTCLLRKGGNFVAKIFRGRDIDMLYSQL 174
D + DGAPDVTGLHD+DE+V T +L++GG F+AKIFRG+D +LY Q
Sbjct: 121 DLVVCDGAPDVTGLHDMDEFVQSQLILAGLTIVTHILKEGGKFIAKIFRGKDTSLLYCQ- 179
Query: 175 GYLFEKVICAKPRSSRGTSLESFIVCLGYNPPANWEPKLDVNSSVEDFFQGCDIGKLRLE 234
+F VC Y+PP + P+ D++ +E G G L
Sbjct: 180 ---------------------AFAVCENYSPPEGFNPR-DLHRLLEKV--GSPSGGSDL- 214
Query: 235 DKCPNYHEEPRSI-ATFIACGGLSSFDSDATYHV-----DTSTPALDPVQSPTNPPYKKA 288
D + E P + F+ACG L+ +DSD +Y + +S +LDP+Q P PPYK+A
Sbjct: 215 DCSSGWLEGPNKVYIPFLACGDLTGYDSDRSYPLPREADGSSYQSLDPIQPPIAPPYKRA 274
Query: 289 LELKR 293
LELK+
Sbjct: 275 LELKK 279
>7300216 [DR] KOG1099 SAM-dependent methyltransferase/cell division protein
FtsJ
Length = 302
Score = 197 bits (502), Expect = 1e-50
Identities = 122/299 (40%), Positives = 165/299 (54%), Gaps = 18/299 (6%)
Query: 1 MGKSSKDKRDLYYRKAKEQGYRARSAXXXXXXXXXXXXXXXAVRVVDLCAAPGSWSQVLS 60
MGK+SKDKRD+YYR+AK++G+RARSA R VDLCAAPGSWSQVLS
Sbjct: 1 MGKTSKDKRDIYYRQAKDEGWRARSAFKLLHVDEAYGILNGVQRAVDLCAAPGSWSQVLS 60
Query: 61 RRLFPQSSDNSDR---KIVAVDLQPMSPIDNVITLQADITHPKTLQTITELFEG-KKADF 116
R+L+ + ++ KI+AVDLQ M+PI ++ LQ DIT T + I F G +KA
Sbjct: 61 RKLYDTCETDDEKSAVKIIAVDLQAMAPIRGILQLQGDITKQSTAEAIIGHFGGNEKAQL 120
Query: 117 ICSDGAPDVTGLHDLDEYVXXXXXXXXXXXXTCLLRKGGNFVAKIFRGRDIDMLYSQLGY 176
+ DGAPDVTG+H++DEY+ TC+L GG FVAKIF+G +L SQ+
Sbjct: 121 VVCDGAPDVTGVHEMDEYMQHQLLVAALSIATCVLETGGTFVAKIFKGNATSLLSSQMQI 180
Query: 177 LFEKVICAKPRSSRGTSLESFIVCLGYNPPANWEPKLDVNSSVEDFFQGCDIGKLRLEDK 236
F+K KP SSR +S+E+F+VC + P + P++ +N + +D +RL +
Sbjct: 181 FFKKFDIYKPPSSRPSSIEAFVVCSDFCLPEGYIPQV-INPARDD---------IRLLAQ 230
Query: 237 CPNYHEEPRSIATFIACG---GLSSFDSDATYHVDTSTPALDPVQSPTNPPYKKALELK 292
E R + FIACG GLS + T D S L+ V LE K
Sbjct: 231 -KTGSEVNRRLVPFIACGDLNGLSDPEEGKTSSSDESKSNLEYVYDAVMDDASYPLEFK 288
>7300710 [DR] KOG1099 SAM-dependent methyltransferase/cell division protein
FtsJ
Length = 320
Score = 193 bits (491), Expect = 2e-49
Identities = 118/293 (40%), Positives = 161/293 (54%), Gaps = 16/293 (5%)
Query: 1 MGKSSKDKRDLYYRKAKEQGYRARSAXXXXXXXXXXXXXXXAVRVVDLCAAPGSWSQVLS 60
MG++SKDKRD++YR AKEQG+RARSA R VDLCAAPGSWSQVL+
Sbjct: 1 MGRTSKDKRDIFYRLAKEQGWRARSAFKLLQADETFQLLEGLTRAVDLCAAPGSWSQVLA 60
Query: 61 RRLF-PQSSDNSDR-KIVAVDLQPMSPIDNVITLQADITHPKTLQTITELFEGKKADFIC 118
+RL+ P + ++ KI+AVDLQ M+PI+ V L+ADI+ T + I E F G+KA +
Sbjct: 61 KRLYEPLPPEEREKVKIIAVDLQGMAPIEGVKQLRADISKESTAEAIIEFFGGEKAQIVV 120
Query: 119 SDGAPDVTGLHDLDEYVXXXXXXXXXXXXTCLLRKGGNFVAKIFRGRDIDMLYSQLGYLF 178
SDGAPD TG+HD D YV T +L +GG+FV+KI+R LY+QL F
Sbjct: 121 SDGAPDSTGMHDFDSYVQGELLLSALSISTFILEEGGSFVSKIYRADRTSRLYTQLKRFF 180
Query: 179 EKVICAKPRSSRGTSLESFIVCLGYNPPANWEPKLDVNSSVEDFFQGCDIGKLRLEDKCP 238
+ V KP +SR +S+E+F+V + P ++P N + E Q E
Sbjct: 181 KNVCVFKPSASRNSSIEAFVVAREFCLPDGYKP---CNLTTEWHDQP--------ESWVG 229
Query: 239 NYHEEPRSI-ATFIACGGLSSFDSDATYHVDTSTPALDPVQSPTNPPYKKALE 290
E P + F+A G DSD TY + + +PVQ P Y+ L+
Sbjct: 230 RKKESPPVVQVPFVAYKG--ELDSDRTYDLGENYVYKEPVQQPLTAAYQDILQ 280
>ECU09g0920 [DR] KOG1099 SAM-dependent methyltransferase/cell division protein
FtsJ
Length = 237
Score = 134 bits (338), Expect = 1e-31
Identities = 74/197 (37%), Positives = 105/197 (52%), Gaps = 4/197 (2%)
Query: 6 KDKRDLYYRKAKEQGYRARSAXXXXXXXXXXXXXXXAVRVVDLCAAPGSWSQVLSRRLFP 65
++KRD+YYR AK+ YRARS VVDLCAAPGSWSQ S +L
Sbjct: 4 EEKRDVYYRLAKKNKYRARSVYKLMHIDEEHDIFRDVEGVVDLCAAPGSWSQYASEKLLK 63
Query: 66 QSSDNSDRKIVAVDLQPMSPIDNVITLQADITHPKTLQTITELFEGKKADFICSDGAPDV 125
+ N +IV+VD+Q + PI+ V+ ++ DIT L+ I E+ G+ AD + DGAPD+
Sbjct: 64 R---NRGARIVSVDIQDIVPIEGVMCIKDDITSASCLEKILEVL-GRPADLVICDGAPDI 119
Query: 126 TGLHDLDEYVXXXXXXXXXXXXTCLLRKGGNFVAKIFRGRDIDMLYSQLGYLFEKVICAK 185
TG+H++DEY+ + R G +FV K RG + + V K
Sbjct: 120 TGIHEIDEYLQIELLKSALATSLRVSRPGSSFVGKYLRGECTPYIAGHFRKFYGGVTLLK 179
Query: 186 PRSSRGTSLESFIVCLG 202
P++SR S+E F+ C G
Sbjct: 180 PKASRTDSMECFLYCTG 196
>Hs17017991 [AR] KOG1098 Putative SAM-dependent rRNA methyltransferase SPB1
Length = 847
Score = 130 bits (328), Expect = 2e-30
Identities = 79/211 (37%), Positives = 106/211 (49%), Gaps = 6/211 (2%)
Query: 2 GKSSKDKRDLYYRKAKEQGYRARSAXXXXXXXXXXXXXXXAVRVVDLCAAPGSWSQVLSR 61
GK K +RD +Y AKE GYR+RSA A ++DLCAAPG W QV ++
Sbjct: 5 GKVGKSRRDKFYHLAKETGYRSRSAFKLIQLNRRFQFLQKARALLDLCAAPGGWLQVAAK 64
Query: 62 RLFPQSSDNSDRKIVAVDLQPMSPIDNVITLQADITHPKTLQTITELFEGKKADFICSDG 121
P SS IV VDL P+ P+ NV+TLQ DIT + Q + + + K D + +DG
Sbjct: 65 -FMPVSS-----LIVGVDLVPIKPLPNVVTLQEDITTERCRQALRKELKTWKVDVVLNDG 118
Query: 122 APDVTGLHDLDEYVXXXXXXXXXXXXTCLLRKGGNFVAKIFRGRDIDMLYSQLGYLFEKV 181
AP+V D Y L +GG+F+ K+FR RD L LF +V
Sbjct: 119 APNVGASWVHDAYSQAHLTLMALRLACDFLARGGSFITKVFRSRDYQPLLWIFQQLFRRV 178
Query: 182 ICAKPRSSRGTSLESFIVCLGYNPPANWEPK 212
KP++SR S E F+VC G+ P + K
Sbjct: 179 QATKPQASRHESAEIFVVCQGFLAPDKVDSK 209
>SPAC1687.11 [AR] KOG1098 Putative SAM-dependent rRNA methyltransferase SPB1
Length = 802
Score = 130 bits (326), Expect = 3e-30
Identities = 80/210 (38%), Positives = 100/210 (47%), Gaps = 6/210 (2%)
Query: 3 KSSKDKRDLYYRKAKEQGYRARSAXXXXXXXXXXXXXXXAVRVVDLCAAPGSWSQVLSRR 62
K++K + D +Y+ AKEQGYR+R+A A ++DLCAAPG W QV S+
Sbjct: 7 KTAKGRLDKWYKLAKEQGYRSRAAFKLVQLNQKYSFLEKAKVIIDLCAAPGGWLQVASKT 66
Query: 63 LFPQSSDNSDRKIVAVDLQPMSPIDNVITLQADITHPKTLQTITELFEGKKADFICSDGA 122
P S IV VDL P+ PI N T DIT K + + KAD + DGA
Sbjct: 67 CKPGSL------IVGVDLAPIKPIPNCHTFVEDITSDKCRSQLRGYLKTWKADVVLHDGA 120
Query: 123 PDVTGLHDLDEYVXXXXXXXXXXXXTCLLRKGGNFVAKIFRGRDIDMLYSQLGYLFEKVI 182
P+V D Y L GG FV K+FR RD + L LF KV
Sbjct: 121 PNVGSAWLQDAYGQAQLVLMSMKLACEFLVAGGTFVTKVFRSRDYNNLLWVFKQLFNKVE 180
Query: 183 CAKPRSSRGTSLESFIVCLGYNPPANWEPK 212
KP SSR S E F+VC GY P +P+
Sbjct: 181 ATKPPSSRNVSAEIFVVCRGYKAPKKLDPR 210
>ECU07g1340 [AR] KOG1098 Putative SAM-dependent rRNA methyltransferase SPB1
Length = 573
Score = 130 bits (326), Expect = 3e-30
Identities = 83/206 (40%), Positives = 109/206 (52%), Gaps = 9/206 (4%)
Query: 1 MGKSS---KDKRDLYYRKAKEQGYRARSAXXXXXXXXXXXXXXXAVRVVDLCAAPGSWSQ 57
MGKS K + D YY AKE+GYRARSA A ++DLCAAPGSWSQ
Sbjct: 24 MGKSKSTGKTRLDKYYSLAKEKGYRARSAFKLLQMNRKYGFLEDAHVLIDLCAAPGSWSQ 83
Query: 58 VLSRRLFPQSSDNSDRKIVAVDLQPMSPIDNVITLQADITHPKTLQTITELFEGKKADFI 117
V ++ + + RKIVA+DL+P+ I +V T+ DIT + + E+ KAD +
Sbjct: 84 VAAQEMPLR------RKIVAIDLEPIKFIGDVDTIVEDITTDECRLKLREILGTHKADVV 137
Query: 118 CSDGAPDVTGLHDLDEYVXXXXXXXXXXXXTCLLRKGGNFVAKIFRGRDIDMLYSQLGYL 177
DGAP+V + D + LRKGG FV K+FR +D L + L L
Sbjct: 138 LHDGAPNVGTSWENDAFNQNLLVLHSARLAAEFLRKGGVFVTKVFRSQDYFSLLNVLSQL 197
Query: 178 FEKVICAKPRSSRGTSLESFIVCLGY 203
F V +KP SSR S E F+VCLG+
Sbjct: 198 FGSVETSKPLSSRSQSAEIFLVCLGF 223
>YCL054w [AR] KOG1098 Putative SAM-dependent rRNA methyltransferase SPB1
Length = 841
Score = 128 bits (322), Expect = 9e-30
Identities = 89/244 (36%), Positives = 119/244 (48%), Gaps = 10/244 (4%)
Query: 3 KSSKDKRDLYYRKAKEQGYRARSAXXXXXXXXXXXXXXXAVRVV-DLCAAPGSWSQVLSR 61
K+SK + D YY AKE+GYRARS+ +VV DLCAAPGSW QV S+
Sbjct: 7 KNSKGRLDRYYYLAKEKGYRARSSFKIIQINEKYGHFLEKSKVVIDLCAAPGSWCQVASK 66
Query: 62 RLFPQSSDNSDRKIVAVDLQPMSPIDNVITLQADITHPKTLQTITELFEGKKADFICSDG 121
L P +S I+ VD+ PM P+ NVIT Q+DIT + + KAD + DG
Sbjct: 67 -LCPVNS-----LIIGVDIVPMKPMPNVITFQSDITTEDCRSKLRGYMKTWKADTVLHDG 120
Query: 122 APDVTGLHDLDEYVXXXXXXXXXXXXTCLLRKGGNFVAKIFRGRDIDMLYSQLGYLFEKV 181
AP+V D + L G FV KIFR +D + L LFEKV
Sbjct: 121 APNVGLGWVQDAFTQSQLTLQALKLAVENLVVNGTFVTKIFRSKDYNKLIWVFQQLFEKV 180
Query: 182 ICAKPRSSRGTSLESFIVCLGYNPPANWEPKLDVNSSVEDFFQGCDIGKLRLEDKCPNYH 241
KP +SR S E F+VC G+ P +P+L ++ F+ G+ +E K N
Sbjct: 181 EATKPPASRNVSAEIFVVCKGFKAPKRLDPRL---LDPKEVFEELPDGQQNMESKIYNPE 237
Query: 242 EEPR 245
++ R
Sbjct: 238 KKVR 241
>CE23796 [AR] KOG1098 Putative SAM-dependent rRNA methyltransferase SPB1
Length = 719
Score = 125 bits (313), Expect = 1e-28
Identities = 83/205 (40%), Positives = 104/205 (50%), Gaps = 8/205 (3%)
Query: 3 KSSKDKRDLYYRKAKEQGYRARSAXXXXXXXXXXXXXXXAVRVVDLCAAPGSWSQVLSRR 62
K K +RD YY+ AKE GYR+R+A + VDLCAAPG W QV S+
Sbjct: 6 KIGKQRRDKYYKLAKEAGYRSRAAFKLVQLNKRFEFLEKSRATVDLCAAPGGWMQVASQ- 64
Query: 63 LFPQSSDNSDRKIVAVDLQPMSPIDNVITLQADITHPKTLQTITELFEGKKADFICSDGA 122
P SS IV VDL P+ PI N I LQ DIT +T I + + AD + DGA
Sbjct: 65 FMPVSS-----LIVGVDLAPIKPIKNCIALQGDITTNETRAAIKKELKTWSADCVLHDGA 119
Query: 123 PDVTGLHDL-DEYVXXXXXXXXXXXXTCLLRKGGNFVAKIFRGRDIDMLYSQLGYLFEKV 181
P+V GL+ + D + T +LRKGG FV K+FR D L LF++V
Sbjct: 120 PNV-GLNWVHDAFQQNCLTLSALKLATQILRKGGTFVTKVFRSNDYSCLIRVFEKLFKRV 178
Query: 182 ICAKPRSSRGTSLESFIVCLGYNPP 206
KP +SR S E F+VC Y P
Sbjct: 179 HVWKPAASRLESAEIFVVCEVYQKP 203
>CE23795 [AR] KOG1098 Putative SAM-dependent rRNA methyltransferase SPB1
Length = 833
Score = 125 bits (313), Expect = 1e-28
Identities = 83/205 (40%), Positives = 104/205 (50%), Gaps = 8/205 (3%)
Query: 3 KSSKDKRDLYYRKAKEQGYRARSAXXXXXXXXXXXXXXXAVRVVDLCAAPGSWSQVLSRR 62
K K +RD YY+ AKE GYR+R+A + VDLCAAPG W QV S+
Sbjct: 6 KIGKQRRDKYYKLAKEAGYRSRAAFKLVQLNKRFEFLEKSRATVDLCAAPGGWMQVASQ- 64
Query: 63 LFPQSSDNSDRKIVAVDLQPMSPIDNVITLQADITHPKTLQTITELFEGKKADFICSDGA 122
P SS IV VDL P+ PI N I LQ DIT +T I + + AD + DGA
Sbjct: 65 FMPVSS-----LIVGVDLAPIKPIKNCIALQGDITTNETRAAIKKELKTWSADCVLHDGA 119
Query: 123 PDVTGLHDL-DEYVXXXXXXXXXXXXTCLLRKGGNFVAKIFRGRDIDMLYSQLGYLFEKV 181
P+V GL+ + D + T +LRKGG FV K+FR D L LF++V
Sbjct: 120 PNV-GLNWVHDAFQQNCLTLSALKLATQILRKGGTFVTKVFRSNDYSCLIRVFEKLFKRV 178
Query: 182 ICAKPRSSRGTSLESFIVCLGYNPP 206
KP +SR S E F+VC Y P
Sbjct: 179 HVWKPAASRLESAEIFVVCEVYQKP 203
>7293173 [AR] KOG1098 Putative SAM-dependent rRNA methyltransferase SPB1
Length = 817
Score = 124 bits (312), Expect = 1e-28
Identities = 79/211 (37%), Positives = 107/211 (50%), Gaps = 6/211 (2%)
Query: 3 KSSKDKRDLYYRKAKEQGYRARSAXXXXXXXXXXXXXXXAVRVVDLCAAPGSWSQVLSRR 62
K K ++D +Y+ AKE G R+R+A + +DLCAAPG W QV +
Sbjct: 6 KVGKTRKDKFYQLAKETGLRSRAAFKLIQLNRKFGFLQQSQVCLDLCAAPGGWMQVAKQN 65
Query: 63 LFPQSSDNSDRKIVAVDLQPMSPIDNVITLQADITHPKTLQTITELFEGKKADFICSDGA 122
+ P SS ++ VDL P+ PI I L DIT K Q++T+ + KAD + DGA
Sbjct: 66 M-PVSSI-----VIGVDLFPIRPIAGCIGLVEDITTEKCRQSLTKELQSWKADVVLHDGA 119
Query: 123 PDVTGLHDLDEYVXXXXXXXXXXXXTCLLRKGGNFVAKIFRGRDIDMLYSQLGYLFEKVI 182
P+V D Y T LR GG FV K+FR +D + L L LF+KV
Sbjct: 120 PNVGRNWLYDAYQQICLTLNALKLSTQFLRNGGWFVTKVFRSKDYNALLWVLKQLFKKVH 179
Query: 183 CAKPRSSRGTSLESFIVCLGYNPPANWEPKL 213
KP +SR S E F+VC GY P + +P+L
Sbjct: 180 ATKPSASRKESAEIFVVCQGYLAPDHIDPRL 210
>At4g25730 [AR] KOG1098 Putative SAM-dependent rRNA methyltransferase SPB1
Length = 821
Score = 100 bits (249), Expect = 3e-21
Identities = 71/217 (32%), Positives = 104/217 (47%), Gaps = 10/217 (4%)
Query: 1 MGK-SSKDKRDLYYRKAKEQGYRARSAXXXXXXXXXXXXXXXAVRVVDLCAAPGSWSQVL 59
MGK K + D YYR AKE+G+R+R++ A V+DLCAAPG W QV
Sbjct: 1 MGKVKGKHRLDKYYRLAKERGFRSRASYKLLQLDAKYSLLHSAHAVLDLCAAPGGWMQVA 60
Query: 60 SRRLFPQSSDNSDRKIVAVDLQPMSPIDNVITLQADITHPKTLQTITELFE--GKKA-DF 116
++ P S ++ +DL P+ P+ +T+ DIT + I ++ E G A +
Sbjct: 61 VEKV-PVGS-----LVLGIDLVPILPVRGCVTMTQDITRTECKSKIKQVMEQHGVSAFNL 114
Query: 117 ICSDGAPDVTGLHDLDEYVXXXXXXXXXXXXTCLLRKGGNFVAKIFRGRDIDMLYSQLGY 176
+ DG+P+V G + T L + GN V K+ +L L
Sbjct: 115 VLHDGSPNVGGAWAQEAMSQNALVIDSVRLATEFLARNGNLVTKMCVPEPFFLLAFLLVQ 174
Query: 177 LFEKVICAKPRSSRGTSLESFIVCLGYNPPANWEPKL 213
LFEKV KP +SR S E+++V L Y PA +P+L
Sbjct: 175 LFEKVEVFKPPASRSASAETYLVGLKYLAPAKIDPRL 211
>Hs7019377 [D] KOG4589 Cell division protein FtsJ
Length = 246
Score = 99.8 bits (247), Expect = 4e-21
Identities = 65/199 (32%), Positives = 96/199 (47%), Gaps = 3/199 (1%)
Query: 9 RDLYYRKAKEQGYRARSAXXXXXXXXXXXXXXXAVRVVDLCAAPGSWSQVLSRRLFPQSS 68
RD + + AK + YR RSA +RV+D AAPG+WSQV +++ +
Sbjct: 40 RDPFVKAAKVESYRCRSAFKLLEVNERHQILRPGLRVLDCGAAPGAWSQVAVQKVNAAGT 99
Query: 69 DNSDRK--IVAVDLQPMSPIDNVITL-QADITHPKTLQTITELFEGKKADFICSDGAPDV 125
D S ++ VDL + P++ L AD+T P+T Q I E+ G++AD I SD AP+
Sbjct: 100 DPSSPVGFVLGVDLLHIFPLEGATFLCPADVTDPRTSQRILEVLPGRRADVILSDMAPNA 159
Query: 126 TGLHDLDEYVXXXXXXXXXXXXTCLLRKGGNFVAKIFRGRDIDMLYSQLGYLFEKVICAK 185
TG DLD +L+ GG F+ K + G L +L F+ V K
Sbjct: 160 TGFRDLDHDRLISLCLTLLSVTPDILQPGGTFLCKTWAGSQSRRLQRRLTEEFQNVRIIK 219
Query: 186 PRSSRGTSLESFIVCLGYN 204
P +SR S E + + Y+
Sbjct: 220 PEASRKESSEVYFLATQYH 238
>SPBC2G2.15c [D] KOG4589 Cell division protein FtsJ
Length = 218
Score = 77.8 bits (190), Expect = 2e-14
Identities = 56/217 (25%), Positives = 93/217 (42%), Gaps = 24/217 (11%)
Query: 4 SSKDKRDLYYRKAKEQGYRARSAXXXXXXXXXXXXXXXAVRVVDLCAAPGSWSQVLSRRL 63
++K +D Y +K+K +R+R+A V+D+ APGSWSQV + +
Sbjct: 11 AAKRSKDFYRKKSKIDNFRSRAAYKLIELNSKYRFINKEDVVIDVGFAPGSWSQVAKKLV 70
Query: 64 FPQSSDNSDRKIVAVDLQPMSPIDNVITLQADITHPKTLQTITELFEGKK---------- 113
+ K++ +D+Q ++P + V+ + DI P TL T+LFE +
Sbjct: 71 ------GNKGKVIGIDIQHIAPPEGVLPIYGDIRDPNTL---TKLFEALRLLHEPNTNDS 121
Query: 114 -----ADFICSDGAPDVTGLHDLDEYVXXXXXXXXXXXXTCLLRKGGNFVAKIFRGRDID 168
D + SD TG+ D + L+ G+F+ K + G +
Sbjct: 122 IDCRVVDAVISDMLHKATGIRIRDHALSMELCASALHVALTFLKSNGSFICKFYMGDEDA 181
Query: 169 MLYSQLGYLFEKVICAKPRSSRGTSLESFIVCLGYNP 205
L + L F V KP++S S E++ VCL P
Sbjct: 182 DLQNLLKSHFRFVQVMKPKASLKESREAYFVCLERKP 218
>7300552 [D] KOG4589 Cell division protein FtsJ
Length = 250
Score = 67.8 bits (164), Expect = 2e-11
Identities = 50/197 (25%), Positives = 78/197 (39%), Gaps = 3/197 (1%)
Query: 10 DLYYRKAKEQGYRARSAXXXXXXXXXXXXXXXAVRVVDLCAAPGSWSQVLSRRLFPQSSD 69
D Y KA+ YR RSA V++ AAPGSW+QV R
Sbjct: 48 DPYVEKARMMNYRCRSAFKLLEIDDKYGILRPGDTVLECGAAPGSWTQVAVERTNANGKQ 107
Query: 70 NSDRK--IVAVDLQPMSPIDNVITLQA-DITHPKTLQTITELFEGKKADFICSDGAPDVT 126
+ + ++DL + D T + + E + +K + + SD AP+ T
Sbjct: 108 ERAPQGAVFSIDLLHFHAVPGATIFGGMDFTSSLAQKRLREALQDRKVNCVLSDMAPNAT 167
Query: 127 GLHDLDEYVXXXXXXXXXXXXTCLLRKGGNFVAKIFRGRDIDMLYSQLGYLFEKVICAKP 186
G+ LD+ + + V K++ D+ L + +EKV KP
Sbjct: 168 GVRMLDQESITNLCYEVLRFALAMSAPQAHLVVKVWDNGDVPKLERDMLRFYEKVKRVKP 227
Query: 187 RSSRGTSLESFIVCLGY 203
R+SRG S E F+V +
Sbjct: 228 RASRGDSAEHFLVARNF 244
>CE16052 [D] KOG4589 Cell division protein FtsJ
Length = 214
Score = 62.0 bits (149), Expect = 1e-09
Identities = 55/203 (27%), Positives = 80/203 (39%), Gaps = 12/203 (5%)
Query: 6 KDKRDLYYRKAKEQGYRARSAXXXXXXXXXXXXXXXAVRVVDLCAAPGSWSQVLSRRLFP 65
+ D + KA+E YRARSA V+D+ APGSW QV+ ++
Sbjct: 17 RQSTDEFAVKAREHNYRARSAFKLIEINEKFKFLKPESTVIDIGCAPGSWLQVVVQKC-- 74
Query: 66 QSSDNSDRKIVAVDLQPMSPIDNVITLQ-ADITHPKTLQTITELFEGKKADFICSDGAPD 124
+ VDLQ + PI L +DIT P I E ++ D + SD AP+
Sbjct: 75 -----PNGYASGVDLQNVLPIRGADILSLSDITDPAVKLKIREKLAHRQVDVVLSDMAPN 129
Query: 125 VTGLHDLDEY----VXXXXXXXXXXXXTCLLRKGGNFVAKIFRGRDIDMLYSQLGYLFEK 180
TG + D + L K G ++ KI+ G +L F
Sbjct: 130 PTGDNATDHLRLIELCRSVFRLFSVENEIELVKNGVYLCKIWDGSARAEFVRELSDRFST 189
Query: 181 VICAKPRSSRGTSLESFIVCLGY 203
V KP + R S E ++ C +
Sbjct: 190 VKTVKPTACRDNSAELYLFCRNF 212
>7302710 [A] KOG3674 FtsJ-like RNA methyltransferase
Length = 700
Score = 51.2 bits (121), Expect = 2e-06
Identities = 45/190 (23%), Positives = 79/190 (40%), Gaps = 28/190 (14%)
Query: 42 AVRVVDLCAAPGSWSQVL------------------SRRLFPQSSDNSDRKIVAVDLQPM 83
AV + LC APG++ L S L P N+ ++++ D +
Sbjct: 132 AVNSMHLCEAPGAFIASLNHYLHSKYEKDEIKWRWRSTTLNPYYEGNAINQMISDDRFIV 191
Query: 84 SPIDNVI---TLQADITHPKTLQTITELFEGK---KADFICSDGAPDVTGLHDLDEYVXX 137
+DN L ++ + + E E + + D + +DG+ D D E +
Sbjct: 192 HTLDNWFFHKDLTGNLLDVANIDHLVERCEVEFQGQVDLVTADGSIDCAAQPDCQEEIVV 251
Query: 138 XXXXXXXXXXTCLLRKGGNFVAK---IFRGRDIDMLYSQLGYLFEKVICAKPRSSRGTSL 194
+L GGNF+ K +F + +LY+ L +FE+V KP +S+ +
Sbjct: 252 RLFFAEVLSALRILSSGGNFLVKMFTLFEACSVSLLYT-LNCIFEEVHIFKPATSKRGNS 310
Query: 195 ESFIVCLGYN 204
E +++CL YN
Sbjct: 311 EVYVICLNYN 320
Database: KOG eukaryal database 04/03
Posted date: Apr 14, 2003 1:07 PM
Number of letters in database: 30,389,216
Number of sequences in database: 60,738
Lambda K H
0.319 0.136 0.408
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 17,575,611
Number of Sequences: 60738
Number of extensions: 701018
Number of successful extensions: 1593
Number of sequences better than 1.0e-05: 21
Number of HSP's better than 0.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 6
Number of HSP's that attempted gapping in prelim test: 1519
Number of HSP's gapped (non-prelim): 22
length of query: 301
length of database: 30,389,216
effective HSP length: 106
effective length of query: 195
effective length of database: 23,950,988
effective search space: 4670442660
effective search space used: 4670442660
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)