ORF STATUS Function Best COG Functional category Pathways and functional systems
r_klactVI4951 check: MH O KOG0944 Posttranslational modification, protein turnover, chaperones Ubiquitin-specific protease UBP14
Only best alignment is shown:
BLASTP 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= r_klactVI4951 1718738 1721047 770
(770 letters)
Database: KOG eukaryal database 04/03
60,738 sequences; 30,389,216 total letters
Searching..................................................done
Color Key for Alignment Scores: 
Score E
Sequences producing significant alignments: (bits) Value
YBR058c [O] KOG0944 Ubiquitin-specific protease UBP14 725 0.0
SPBC6B1.06c [O] KOG0944 Ubiquitin-specific protease UBP14 347 3e-95
Hs4507855 [O] KOG0944 Ubiquitin-specific protease UBP14 277 5e-74
7292313 [O] KOG0944 Ubiquitin-specific protease UBP14 258 2e-68
Hs4507849 [O] KOG0944 Ubiquitin-specific protease UBP14 238 3e-62
CE14219 [O] KOG0944 Ubiquitin-specific protease UBP14 219 2e-56
At3g20625 [O] KOG0944 Ubiquitin-specific protease UBP14 159 1e-38
ECU03g0660 [O] KOG0944 Ubiquitin-specific protease UBP14 105 2e-22
At3g20630 [O] KOG0944 Ubiquitin-specific protease UBP14 96 2e-19
7295432 [O] KOG1865 Ubiquitin carboxyl-terminal hydrolase 73 1e-12
HsM18874088 [O] KOG1870 Ubiquitin C-terminal hydrolase 73 2e-12
Hs21489975 [O] KOG1870 Ubiquitin C-terminal hydrolase 73 2e-12
Hs5730108 [O] KOG1870 Ubiquitin C-terminal hydrolase 70 2e-11
Hs5454156 [O] KOG1873 Ubiquitin-specific protease 69 2e-11
SPAC23G3.08c [O] KOG1873 Ubiquitin-specific protease 65 4e-10
Hs14249724 [O] KOG1873 Ubiquitin-specific protease 62 4e-09
SPCC1682.12c [O] KOG1865 Ubiquitin carboxyl-terminal hydrolase 61 7e-09
Hs20540195 [O] KOG1865 Ubiquitin carboxyl-terminal hydrolase 59 4e-08
Hs14149817 [O] KOG1867 Ubiquitin-specific protease 58 5e-08
Hs13994268 [O] KOG1868 Ubiquitin C-terminal hydrolase 58 5e-08
CE28903 [R] KOG0804 Cytoplasmic Zn-finger protein BRAP2 (BRCA1 a... 57 1e-07
YHL010c [R] KOG0804 Cytoplasmic Zn-finger protein BRAP2 (BRCA1 a... 57 1e-07
CE26241 [O] KOG1867 Ubiquitin-specific protease 56 2e-07
Hs21361749 [O] KOG1867 Ubiquitin-specific protease 56 2e-07
SPAC13A11.04c [O] KOG1867 Ubiquitin-specific protease 55 4e-07
CE27053 [O] KOG1864 Ubiquitin-specific protease 55 4e-07
CE09811 [O] KOG1863 Ubiquitin carboxyl-terminal hydrolase 55 4e-07
7290583 [O] KOG1873 Ubiquitin-specific protease 55 4e-07
SPCC16A11.12c [O] KOG1870 Ubiquitin C-terminal hydrolase 55 5e-07
At5g10790 [O] KOG1867 Ubiquitin-specific protease 54 7e-07
Hs13435157 [O] KOG1865 Ubiquitin carboxyl-terminal hydrolase 54 9e-07
CE05829 [O] KOG1864 Ubiquitin-specific protease 54 9e-07
At2g32780 [O] KOG1873 Ubiquitin-specific protease 54 9e-07
Hs22043041 [O] KOG1866 Ubiquitin carboxyl-terminal hydrolase 54 1e-06
Hs5730110 [O] KOG1867 Ubiquitin-specific protease 53 2e-06
YJL197w [O] KOG1870 Ubiquitin C-terminal hydrolase 52 3e-06
7300491 [R] KOG0804 Cytoplasmic Zn-finger protein BRAP2 (BRCA1 a... 52 3e-06
Hs22045513 [O] KOG1868 Ubiquitin C-terminal hydrolase 52 5e-06
7295436 [O] KOG4598 Putative ubiquitin-specific protease 52 5e-06
HsM19923759 [O] KOG1868 Ubiquitin C-terminal hydrolase 51 8e-06
Hs4827054 [O] KOG1868 Ubiquitin C-terminal hydrolase 51 8e-06
Hs21361712 [O] KOG1868 Ubiquitin C-terminal hydrolase 51 8e-06
>YBR058c [O] KOG0944 Ubiquitin-specific protease UBP14
Length = 803
Score = 725 bits (1872), Expect = 0.0
Identities = 374/788 (47%), Positives = 513/788 (64%), Gaps = 32/788 (4%)
Query: 1 MSGSDILDINVPRVIDTDDCVYCFETMKNK----DEGREHSLFICLRCFQSFSEEHWELH 56
M+ + + ++NVP V+ D+C+YCFE+ N+ + +HSL ICL CFQ+ H LH
Sbjct: 23 MAEAVLENVNVPAVVSKDECIYCFESPYNEPLALNASPKHSLNICLNCFQATCNRHVPLH 82
Query: 57 QEVVLSETGSTHDLYLRVFKVLKPKQEREEAGTXXXXXXXXXXVKDVNEDDLYDTHWLL- 115
V + H YL + KV KPKQE E V + +EDD ++T W L
Sbjct: 83 IRVTEYACDTIHSNYLTIAKVEKPKQENVEENNNNKKIKLQ--VIETSEDDTHNTIWSLQ 140
Query: 116 ---GSVEHGELLSSDTPS-IPKEWSDKISEILQTKSSSYQDMSNTWTLELKSCPHIQTFD 171
G +LS T S I +KI +IL+ KS ++D N+W LE+ +CPH + F
Sbjct: 141 RFNGENVPRTVLSKSTDSDISSTALEKIEKILKAKSQDFEDKKNSWVLEISTCPHTENFQ 200
Query: 172 LSNLEKREGGISQSCNDCGLTSNLWLCLHCGNVACGREQVGIEGYSHALKHYESTDGHAL 231
+ + + ++Q C+ C LT NLWLCLHCGN+ CGREQ+GI+G+SHAL HY S + H L
Sbjct: 201 IPSKPENTVNLNQ-CSSCDLTQNLWLCLHCGNIGCGREQIGIDGHSHALDHYRSNNNHPL 259
Query: 232 AIKLGSLTADAADIYCYSCDEDVKFTHNLQLQDILKFWEVEVPAK-SKEKTLVELQVEQS 290
AIKLGSL++ D+YCY+CD++ +F N+ L L+ + + + K + EKTLV+LQVEQ+
Sbjct: 260 AIKLGSLSSSTYDLYCYACDDETRFPDNVNLGSALQIYGINIQEKIADEKTLVQLQVEQN 319
Query: 291 LKWDFQMVDSQGKSLKHLQNGPEYGLGLLNLGNSCYLNSVLQVLLNGGIRNWNLDGLGS- 349
W F+MVDS GK + L YG GL+NLGNSCYLNSV+Q L+NGG+ NW+LD LGS
Sbjct: 320 ENWQFRMVDSSGKEFEKLSASKNYGCGLINLGNSCYLNSVIQSLVNGGVPNWSLDFLGSK 379
Query: 350 FPTDVVYPRTNLHCQLIKIRNAMTLQQSRYPEGIKPTTFKKVIGGSHEEFSSGRQQDSLE 409
FP DVVYP NL CQ IK+ NAM + YP GIKPTTFKK IG +H+EFSS RQQD++E
Sbjct: 380 FPLDVVYPDNNLKCQWIKLLNAMKCEPELYPNGIKPTTFKKCIGQNHQEFSSNRQQDAME 439
Query: 410 FFSYLSDKLDREIFKNTTT---NPNDLFRFNIQDKIKCDNCNKVKFMDQVSEVIQLPLRK 466
F ++L D LD++ F ++++ NPNDL RF ++D+++C+ C KVK+ + +E IQ+PL +
Sbjct: 440 FLTFLLDLLDKKFFSSSSSGIPNPNDLVRFMMEDRLQCNICGKVKYSYEPTEAIQIPLEE 499
Query: 467 LDGEQNLIDRLNDYFSGEKIEYRCLTNKKINTASKVPGFSSFPRTLIINPIRIELINWQP 526
D Q++++R+ YF G+ IE++C K+ TA+K PGF S P+TLI+NPIRI L NW P
Sbjct: 500 NDEPQDMLERIKAYFEGQTIEFKCANCKEKVTANKKPGFKSLPQTLILNPIRIRLQNWIP 559
Query: 527 SKTSEQVVVPGVRD-DALLDMSPFKATGICXXXXXXXXXXSD---SFQFNELFLGQLEQM 582
KTS ++ +PG+ D D +LD+S + + G + SF N+ + QL +M
Sbjct: 560 VKTSNELSLPGLIDRDDMLDVSSYLSQGFDPQTENLLPDEDENRSSFTPNQCSISQLIEM 619
Query: 583 GFSRNATKRALFETGNSDPNAATEWLFQHMEDPNLNEAF--DPHASSSAKNRVDSEALNS 640
GF++NA+ RALF TGN D +A WLFQHM+DP+LN+ F P+ K VD +L S
Sbjct: 620 GFTQNASVRALFNTGNQDAESAMNWLFQHMDDPDLNDPFVPPPNVPKKDKREVDEVSLTS 679
Query: 641 MTAMGLDSKLCRKALILKNGDVNASVEWVFSHMDDDGELPEAE--EWKDQSRKSFGIPAS 698
M +MGL+ LCRKALIL NGDVN SVEWVF++MDDDG PE E + Q +K G +
Sbjct: 680 MLSMGLNPNLCRKALILNNGDVNRSVEWVFNNMDDDGTFPEPEVPNEEQQQKKDLGYSTA 739
Query: 699 SIASAKYKLTAVICHKGNSVHSGHYVAFIKKVVEGKEQWVLYNDEKILLANDEPNFEDIE 758
Y LTAVICHKGNSVHSGHYV FI+K+V K +WVLYNDEK++ A+ + ED++
Sbjct: 740 K----PYALTAVICHKGNSVHSGHYVVFIRKLVADKWKWVLYNDEKLVAAD---SIEDMK 792
Query: 759 KNGYMFFF 766
KNGY++F+
Sbjct: 793 KNGYIYFY 800
>SPBC6B1.06c [O] KOG0944 Ubiquitin-specific protease UBP14
Length = 775
Score = 347 bits (891), Expect = 3e-95
Identities = 249/798 (31%), Positives = 390/798 (48%), Gaps = 88/798 (11%)
Query: 13 RVIDTDDCVYCFETMKNKDEGREHSLFICLRCFQSFSEEHWELHQEVVLSETGSTHDLYL 72
+VI ++CV CF + + E + +CL CFQS E H V +T L
Sbjct: 18 QVIYREECVRCFNS-----QDEEGGIDLCLTCFQSGCGETGLKHSLVHFEQT-------L 65
Query: 73 RVFKVLKPKQEREEAGTXXXXXXXXXXVKDVNEDDLYDTHWLLGSVEHGELLSSDTPSIP 132
V +Q +++ +++ +++DLYD ++ + +L P +
Sbjct: 66 HPIVVTIARQPKQKINDEPPQKITKLEIREDSDEDLYDYFYVPKCLVCNIILDIQDPLL- 124
Query: 133 KEWSDKISEILQTKSSSYQDMSNTWTLELKSCPHIQTFDLSNLEKREGGISQ----SCND 188
S + + +S + W EL +C HI NL + E ++ +C+
Sbjct: 125 ---SLSLEAMKNATKASNKSQLTAWENELTTCDHI-----INLPENETYVTNLDNATCSK 176
Query: 189 CGLTSNLWLCLHCGNVACGREQVGIEGYS-HALKHYESTDGHALAIKLGSLTADA-ADIY 246
C L NLW+CL CG ++CGR+Q G G + HAL HY+ T GH LA+KL S++ D ADIY
Sbjct: 177 CDLAENLWMCLTCGALSCGRKQYGGGGGNGHALSHYDDT-GHPLAVKLKSISPDGQADIY 235
Query: 247 CYSCDEDVKFTHNLQLQDILKFWEVEVPAKSKEKTLVELQVEQSLKWDFQMVDSQGKSLK 306
CYSCDE+ + N++ +L F EK+L ELQ+EQ+L WDF + S +
Sbjct: 236 CYSCDEE-RIDPNIKTH-MLNFGIDIAKLNKTEKSLAELQLEQNLNWDFGASEEDDASKR 293
Query: 307 HLQNGPEYGL-GLLNLGNSCYLNSVLQVLLNGGIRNWNLDGLGSFPTD---VVYPRTNLH 362
GP GL GL NLGNSCYL S +Q L + I+ + + L F T P T+L
Sbjct: 294 LF--GP--GLTGLKNLGNSCYLASTMQSLFS--IKEFAIHELNLFNTYNSVCQTPTTDLQ 347
Query: 363 CQLIKIRNAMTLQQSR-----------------YPEGIKPTTFKKVIGGSHEEFSSGRQQ 405
CQL K+ + + + Y +G++P FK V+G H EF + +QQ
Sbjct: 348 CQLGKLADGLVSGKFSKPSKIGLLNNPSSSILPYQDGLRPFMFKDVVGQGHSEFGTSQQQ 407
Query: 406 DSLEFFSYLSDKLDREIFKNTTTNPNDLFRFNIQDKIKCDNCNKVKFMDQVSE-----VI 460
D+ EF YL K+ + T +F F + K+ C +C +V++ S+ V
Sbjct: 408 DAYEFLLYLLGKIRKSSIAKTDITK--IFDFETEQKLSCLSCKRVRYSSFSSQGLTLTVP 465
Query: 461 QLPLRKLDGEQ-----NLIDRLNDYFSGEKIEYRCLTNKKINTASKVPGFSSFPRTLIIN 515
++ + +++GEQ ++ L+ +++EY C K A+ SFP+ LI+
Sbjct: 466 RVKIGEIEGEQIYEEVSIDQCLDATIQPDQMEYTCEACKSKLGATTTTAMKSFPKVLILQ 525
Query: 516 PIRIELINWQPSKTSEQVVVPGVRDDALLDMSPFKATGICXXXXXXXXXXSDSFQFNELF 575
R +L +Q K S ++V +D + + A +++ ++N+
Sbjct: 526 ANRFDLQGYQVKKLSIPIIV---NEDGIYNFDRLMAKDH-PNDEDYLPEKTETIEWNQSA 581
Query: 576 LGQLEQMGFSRNATKRALFETGNSDPNAATEWLFQHMEDPNLNEAFD-----PHASSSAK 630
+ QL+ MGF +RAL TGNSD A WLF+HMEDP +++ + P A SS
Sbjct: 582 IEQLQAMGFPLVRCQRALLATGNSDTETAMNWLFEHMEDPEIDKPIEVSELLPKADSS-- 639
Query: 631 NRVDSEALNSMTAMGLDSKLCRKALILKNGDVNASVEWVFSHMDDDGELPEAEEWKDQSR 690
V E + S+ G RK L+ N ++ +V+W+ +H D+ E P E D S
Sbjct: 640 --VSEENVQSLCEFGFTVAQARKGLLESNNNIERAVDWILNHPDESFEEPPLEG-SDSSI 696
Query: 691 KS--FGIPASSIASAKYKLTAVICHKGNSVHSGHYVAFIKKVVEGKEQWVLYNDEKILLA 748
K+ G S+ Y L A+I HKG+S H+GHYVAFI+K ++GK+QWVL+NDEK+L
Sbjct: 697 KNENMGSWESTNVPVNYNLKAIISHKGSSAHAGHYVAFIRKEIDGKQQWVLFNDEKVL-- 754
Query: 749 NDEPNFEDIEKNGYMFFF 766
+ E+ + GY++ F
Sbjct: 755 -QVASLEEAKTTGYVYLF 771
>Hs4507855 [O] KOG0944 Ubiquitin-specific protease UBP14
Length = 835
Score = 277 bits (708), Expect = 5e-74
Identities = 236/851 (27%), Positives = 397/851 (45%), Gaps = 129/851 (15%)
Query: 9 INVPRVIDT---DDCVYCFETMKNKDEGREHSLFICLRCFQSFSEEHWELHQEVVLSETG 65
I VP+ D D+C + F+T ++ E L+IC+ F F +++ E H ++TG
Sbjct: 16 IRVPKAGDRVHKDECAFSFDTPES-----EGGLYICMNTFLGFGKQYVERH----FNKTG 66
Query: 66 STHDLYLRVFKVLKPKQEREEAGTXXXXXXXXXXVK-------DVNED--DLYDTHWLLG 116
+YL + + +PK+E GT + D++E+ +L + ++
Sbjct: 67 QR--VYLHLRRTRRPKEEDPATGTGDPPRKKPTRLAIGVEGGFDLSEEKFELDEDVKIVI 124
Query: 117 SVEHGELLSSDTPSIPKEWSDKISE----ILQTKSSSYQDMSNTWTLELKSCPHIQTFDL 172
++ E+ +P D+++ +L S+S + W E++ F L
Sbjct: 125 LPDYLEIARDGLGGLPDIVRDRVTSAVEALLSADSASRKQEVQAWDGEVRQVSK-HAFSL 183
Query: 173 SNLEK--REGGISQSCNDCGLTSNLWLCLHCGNVACGREQV-GIEGYSHALKHYESTDGH 229
L+ R C+ C + NLWL L G++ CGR G G +HA++HY T G+
Sbjct: 184 KQLDNPARIPPCGWKCSKCDMRENLWLNLTDGSILCGRRYFDGSGGNNHAVEHYRET-GY 242
Query: 230 ALAIKLGSLTADAADIYCYSCDEDVKFTHNLQLQDILKFWEVEVPAKSKEKTLVELQVEQ 289
LA+KLG++T D AD+Y Y DED + + F + + +KT+ EL+++
Sbjct: 243 PLAVKLGTITPDGADVYSY--DEDDMVLDPSLAEHLSHFGIDMLKMQKTDKTMTELEIDM 300
Query: 290 SLK-WDFQMVDSQGKSLKHLQNGPEYGLGLLNLGNSCYLNSVLQVLLN-GGIRNWNLDGL 347
+ + +++++ G LK L GP Y G+ NLGNSCYLNSV+QVL + + +D L
Sbjct: 301 NQRIGEWELIQESGVPLKPL-FGPGY-TGIRNLGNSCYLNSVVQVLFSIPDFQRKYVDKL 358
Query: 348 GSF----PTDVVYPRTNLHCQLIKIRNAM-----------------TLQQSRYPEGIKPT 386
PTD P + Q+ K+ + + +Q +GI P
Sbjct: 359 EKIFQNAPTD---PTQDFSTQVAKLGHGLLSGEYSKPVPESGDGERVPEQKEVQDGIAPR 415
Query: 387 TFKKVIGGSHEEFSSGRQQDSLEFFSYLSDKLDREIFKNTTTNPNDLFRFNIQDKIKCDN 446
FK +IG H EFS+ RQQD+ EFF +L + ++R ++ NPN++FRF ++++IKC
Sbjct: 416 MFKALIGKGHPEFSTNRQQDAQEFFLHLINMVERNC--RSSENPNEVFRFLVEERIKCLA 473
Query: 447 CNKVKFMDQVSEVIQLPL------------------RKLDGEQNLIDR-----------L 477
KVK+ +V ++QLP+ R+ + E+ + L
Sbjct: 474 TEKVKYTQRVDYIMQLPVPMDAALNKEELLEYEEKKRQAEEEKMALPELVRAQVPFSSCL 533
Query: 478 NDYFSGEKI-EYRCLTNKKINTASKVPGFSSFPRTLIINPIRIEL-INWQPSKTSEQVVV 535
Y + E++ ++ + + A K F+SFP L+I + ++W P K + +
Sbjct: 534 EAYGAPEQVDDFWSTALQAKSVAVKTTRFASFPDYLVIQIKKFTFGLDWVPKKLDVSIEM 593
Query: 536 PGVRDDALLDMSPFKATGI--------CXXXXXXXXXXSDSFQFNELFLGQLEQMGFSRN 587
P LD+S + TG+ + +E + QL +MGF +
Sbjct: 594 P-----EELDISQLRGTGLQPGEEELPDIAPPLVTPDEPKAPMLDESVIIQLVEMGFPMD 648
Query: 588 ATKRALFETGNSDPNAATEWLFQHMEDPN------LNEAFDPHASSSAKNRVDSEALNSM 641
A ++A++ T NS AA W+ HM+DP+ L + P ++S+A + + + ++
Sbjct: 649 ACRKAVYYTDNSGAEAAMNWVMSHMDDPDFANPLILPGSSGPGSTSAAADPPPEDCVTTI 708
Query: 642 TAMGLDSKLCRKALILKNGDVNASVEWVFSHMDD-DGE----LPEAEEWKDQSRKSFGI- 695
+MG KAL N + +V+W+FSH+DD D E + E D +S +
Sbjct: 709 VSMGFSRDQALKALRATNNSLERAVDWIFSHIDDLDAEAAMDISEGRSAADSISESVPVG 768
Query: 696 PASSIASAKYKLTAVICHKGNSVHSGHYVAFIKKVVEGKEQWVLYNDEKILLANDEPNFE 755
P KY+L A I H G S GHYV IKK EG+ WV+YND+K+ + P +
Sbjct: 769 PKVRDGPGKYQLFAFISHMGTSTMCGHYVCHIKK--EGR--WVIYNDQKVCASEKPP--K 822
Query: 756 DIEKNGYMFFF 766
D+ GY++F+
Sbjct: 823 DL---GYIYFY 830
>7292313 [O] KOG0944 Ubiquitin-specific protease UBP14
Length = 827
Score = 258 bits (660), Expect = 2e-68
Identities = 234/838 (27%), Positives = 377/838 (44%), Gaps = 122/838 (14%)
Query: 18 DDCVYCFETMKNKDEGREHSLFICLRCFQSFSEEHWELHQEVVLSETGSTHDLYLRVFKV 77
D+CVY ++ + L++CL F F E + + + +TG+ L+++ K
Sbjct: 27 DECVYSYDNPETPT-----GLYVCLHSFLGFGEAYVREYAD----KTGNRVFLHIQRVKT 77
Query: 78 LKPKQERE------EAGTXXXXXXXXXXVKD-VNEDDLY------DTHWLLGSVEHGELL 124
+K + E EAG V+ NE D+ DT+ ++ + + L
Sbjct: 78 IKEGADMEAECAESEAGPERKITRLAIGVEGGYNESDMAKKYEIKDTYSIVVAPHLDKKL 137
Query: 125 SSDTPSIPKEWSDKISEILQTKSSSYQ----DMSNTWTLELKSCPHIQTFDLSNLE--KR 178
P +P + + IL S+ + + TW E++ +L L+ KR
Sbjct: 138 PYPDPELPMRVTQSVEAILAADSAIAKLEKATLMGTWDGEVRQASKYAD-NLQQLDNGKR 196
Query: 179 EGGISQSCNDCGLTSNLWLCLHCGNVACGREQV-GIEGYSHALKHYESTDGHALAIKLGS 237
C C LT+NLWL L G++ CGR+ G G HA++HY T G LA+KLG+
Sbjct: 197 IPPSGWQCEKCDLTNNLWLNLTDGSIMCGRKFFDGSGGNDHAVEHYRVT-GFPLAVKLGT 255
Query: 238 LTADA-ADIYCYSCDEDVKFTHNLQLQDILKFWEVEVPA-KSKEKTLVELQVEQSLKWDF 295
+TAD +D++ Y DE V H L+ L + + + A K EK++VEL+++ + +
Sbjct: 256 ITADGKSDVFSYPEDEMVLDPH---LERHLSHFGINMAAMKKSEKSMVELELDINQRIGE 312
Query: 296 QMVDSQGKSLKHLQNGPEYGLGLLNLGNSCYLNSVLQVLLNGGIRNWNLDGLGS------ 349
++ +S GP Y G+ NLGNSCY+NSV+QVL G G+
Sbjct: 313 WTALTESESELQPVAGPGY-TGMRNLGNSCYINSVMQVLFVIPDFQQRFVGTGAERYFKE 371
Query: 350 FPTDVVYPRTNLHCQLIKIRNAMTLQQSRYPE------------GIKPTTFKKVIGGSHE 397
FP+D P + + Q+ K+ LQ +Y GI P FK ++G +H
Sbjct: 372 FPSD---PANDFNIQMAKLGTG--LQSGKYSSIAENTLDTDHSTGISPAMFKNIVGKNHP 426
Query: 398 EFSSGRQQDSLEFFSYLSDKLDREIFKNTTTNPNDLFRFNIQDKIKCDNCNKVKF----- 452
+FS+ +QQD+ +F+ +L LDR TNP D +F ++D+++C +KVK+
Sbjct: 427 DFSTKQQQDANDFYLHLLTLLDRN--SRNQTNPADALKFLLEDRVECLASHKVKYNTREE 484
Query: 453 --------------MDQVSEVIQLPLRKLDGEQNLIDR------------LNDYFSGEKI 486
+D+V E + + Q L DR L +F E I
Sbjct: 485 YSFRLPVPLDKATNLDEVREFQERKKAARETGQRLPDRDIVRHKVPLQACLERFFGPELI 544
Query: 487 E--YRCLTNKKINTASKVPGFSSFPRTLIINPIRIEL-INWQPSKTSEQVVVPGVRDDAL 543
E Y K N A K+ ++ P L+I+ + L +W P K V +P
Sbjct: 545 EQFYSTAIGSKTN-ARKITRLATMPDCLMIHVGKFTLGDDWVPKKLDVSVDMPDE----- 598
Query: 544 LDMSPFKATGICXXXXXXX---XXXSDSFQFNELFLGQLEQMGFSRNATKRALFETGNSD 600
LD+S +++ G F F+E + +L MGF A KRA + T NS
Sbjct: 599 LDLSNWRSAGGLQPGEEALPEPATEEVKFAFDEAVMSELLTMGFPPEACKRACYHTKNSG 658
Query: 601 PNAATEWLFQHMEDPNLNEAF---DPHASSSAKNR--VDSEALNSMTAMGLDSKLCRKAL 655
AA+ WL +H+ D +++E F + A N+ + E+L + +MG D + AL
Sbjct: 659 LEAASNWLMEHIADEDISEPFVVPNNSIGDCAANQFVANPESLAMLMSMGFDERQAVAAL 718
Query: 656 ILKNGDVNASVEWVFSHMDDDGELPEAEEWKDQSRKSFGIPASS---IASAKYKLTAVIC 712
+G+V + +W+FSH D G A + + P + KY+L A I
Sbjct: 719 KATDGNVERATDWIFSHADSIGVEDAAPAANSSAAAASSTPNKTNYRDGRGKYRLVAFIS 778
Query: 713 HKGNSVHSGHYVAFIKKVVEGKEQWVLYNDEKILLANDEPNFEDIEKNGYMFFFNLEE 770
H G S GHYV I+K K +WV++ND K+ + + P +D+ GY++ + E+
Sbjct: 779 HMGTSAQVGHYVCHIRK----KGEWVIFNDSKVAKSQNPP--KDL---GYLYLYMREQ 827
>Hs4507849 [O] KOG0944 Ubiquitin-specific protease UBP14
Length = 863
Score = 238 bits (606), Expect = 3e-62
Identities = 229/877 (26%), Positives = 380/877 (43%), Gaps = 148/877 (16%)
Query: 1 MSGSDILDINVP-----RVIDTDDCVYCFETMKNKDE-GREHSLFICLRCFQSFSEEHWE 54
M+ DI ++ VP RV + D VY E + D E L++C+ F +F EH E
Sbjct: 19 MAAGDIGELLVPHMPTIRVPRSGDRVYKNECAFSYDSPNSEGGLYVCMNTFLAFGREHVE 78
Query: 55 LHQEVVLSETGSTHDLYLRVFKVLKPKQEREEAGTXXXXXXXXXXVK-----DVNEDDLY 109
H +TG + +Y+ + + + K G + D+N DD
Sbjct: 79 RH----FRKTGQS--VYMHLKRHAREKVRGASGGALPKRRNSKIFLDLDTDDDLNSDDYE 132
Query: 110 --DTHWLLGSVEHGELLSSDTPSIPKEWSDKISEILQTKSSSYQDMSNTWTLELKSCPHI 167
D L+ +H E+ + +P + +L +KS + +TW EL +
Sbjct: 133 YEDEAKLVIFPDHYEIALPNIEELPALVTIACDAVLSSKSPYRKQDPDTWENELPVSKYA 192
Query: 168 QTFDLSNLEKREGGI-----SQSCNDCGLTSNLWLCLHCGNVACGR---EQVGIEGYSHA 219
+NL + + G+ C C L NLWL L G+V CG+ + G G HA
Sbjct: 193 -----NNLTQLDNGVRIPPSGWKCARCDLRENLWLNLTDGSVLCGKWFFDSSG--GNGHA 245
Query: 220 LKHYESTDGHALAIKLGSLTADAADIYCYSCDEDVKFTHNLQLQDILKFWEVEVPAKSKE 279
L+HY G+ LA+KLG++T D AD+Y + +E V H + + F + E
Sbjct: 246 LEHYRDM-GYPLAVKLGTITPDGADVYSFQEEEPVLDPH--LAKHLAHFGIDMLHMHGTE 302
Query: 280 KTLVELQVEQSLKWDFQMVDSQGKSLKHLQNGPEYGLGLLNLGNSCYLNSVLQVLLNGGI 339
L + ++ + +++++ G LK + GP Y GL NLGNSCYL+SV+Q + + I
Sbjct: 303 NGLQDNDIKLRVS-EWEVIQESGTKLKPMY-GPGY-TGLKNLGNSCYLSSVMQAIFS--I 357
Query: 340 RNWNLDGLGSFPTDVVY----PRTNLHCQLIKIRNAMTLQQSRYP--------------- 380
+ +G+ P Y P + + Q+ K+ + + Q P
Sbjct: 358 PEFQRAYVGNLPRIFDYSPLDPTQDFNTQMTKLGHGLLSGQYSKPPVKSELIEQVMKEEH 417
Query: 381 ----EGIKPTTFKKVIGGSHEEFSSGRQQDSLEFFSYLSDKLDREIFKNTTTNPNDLFRF 436
GI P FK + SH EFSS RQQD+ EFF +L + ++R + + NP+D+FRF
Sbjct: 418 KPQQNGISPRMFKAFVSKSHPEFSSNRQQDAQEFFLHLVNLVERN--RIGSENPSDVFRF 475
Query: 437 NIQDKIKCDNCNKVKFMDQVSEVIQLP----------------LRKLDGEQN-------- 472
++++I+C KV++ ++V ++QLP L + + E N
Sbjct: 476 LVEERIQCCQTRKVRYTERVDYLMQLPVAMEAATNKDELIAYELTRREAEANRRPLPELV 535
Query: 473 -----LIDRLNDYFSGEKIEYRCLTNKKINTAS-KVPGFSSFPRTLIINPIRIEL-INWQ 525
L + E ++ + + +A K F+SFP L++ + ++W
Sbjct: 536 RAKIPFSACLQAFSEPENVDDFWSSALQAKSAGVKTSRFASFPEYLVVQIKKFTFGLDWV 595
Query: 526 PSKTSEQVVVPGVRDDALLDMSPFKATGI-----------------CXXXXXXXXXXSDS 568
P K + +P LLD++ +A G+ D
Sbjct: 596 PKKFDVSIDMPD-----LLDINHLRARGLQPGEEELPDISPPIVIPDDSKDRLMNQLIDP 650
Query: 569 FQFNELFLGQLEQMGFSRNATKRALFETGNSDPNAATEWLFQHMEDPNLNE-----AFDP 623
+E + QL +MGF A ++A++ TGN A W+ HME+P+ E +
Sbjct: 651 SDIDESSVMQLAEMGFPLEACRKAVYFTGNMGAEVAFNWIIVHMEEPDFAEPLTMPGYGG 710
Query: 624 HASSSAK--------NRVDSEALNSMTAMGLDSKLCRKALILKNGDVNASVEWVFSHMDD 675
AS+ A N+ E + +T+MG +AL N ++ +++W+FSH +
Sbjct: 711 AASAGASVFGASGLDNQPPEEIVAIITSMGFQRNQAIQALRATNNNLERALDWIFSHPEF 770
Query: 676 DGELPEAEEWKDQSRKSF------GIPASSIASAKYKLTAVICHKGNSVHSGHYVAFIKK 729
+ + E ++ + + P S Y+L A I H G S SGHY+ IKK
Sbjct: 771 EEDSDFVIEMENNANANIISEAKPEGPRVKDGSGTYELFAFISHMGTSTMSGHYICHIKK 830
Query: 730 VVEGKEQWVLYNDEKILLANDEPNFEDIEKNGYMFFF 766
EG+ WV+YND K+ + P +D+ GYM+F+
Sbjct: 831 --EGR--WVIYNDHKVCASERPP--KDL---GYMYFY 858
>CE14219 [O] KOG0944 Ubiquitin-specific protease UBP14
Length = 758
Score = 219 bits (557), Expect = 2e-56
Identities = 212/792 (26%), Positives = 352/792 (43%), Gaps = 108/792 (13%)
Query: 18 DDCVYCFETMKNKDEGREHSLFICLRCFQSFSEEHWELHQEVVLSETGSTHDLYLRVFKV 77
D C YCF+ KD L+I L+ + +F EH E++ T S + L+++
Sbjct: 28 DQCAYCFKDPHGKD-----GLYISLKNYHAFCREHAEIYG------TTSGNTLFVQFEST 76
Query: 78 LKPKQEREEAGTXXXXXXXXXXVKDVNEDDLYDTHWLLGSVEHGELLSS--DTPSIPKEW 135
K +ER + ++ D ++ V H E + ++P E
Sbjct: 77 KKIIEERTDGEPTSKMTKLT-----IDSDPKFEFEDKYCVVVHPEYSQQVKNVQNLP-EI 130
Query: 136 SDKISEILQTKS----SSYQDMSNTWTLELKSCPHIQTFDLSNLEKREGGISQSCN--DC 189
++ I++I T S S SN W E+K Q + + K +C C
Sbjct: 131 AEAIAQIANTTSAERLSLLSSTSNAWDAEIKLITKHQNLEQQDNGKHLALTGWTCEVEGC 190
Query: 190 GLTSNLWLCLHCGNVACGREQV-----GIEGYSHALKHYESTDGHALAIKLGSLTADAAD 244
GL NLWL L G V CGR Q G H +++ST L +KLG+++++
Sbjct: 191 GLNDNLWLNLTDGAVRCGRSQFLSDGKKTNGNGHMQDYFDSTR-FPLVVKLGTISSNLEL 249
Query: 245 IYCYSCDEDVKFTHNLQLQDILKFWEVEVPAKSKE--KTLVELQVEQSLKWDFQMVDSQG 302
I YS DED + L+ LK + ++ P K ++ K+ +E++++ + KW++ G
Sbjct: 250 IDVYSYDEDDAVI-DPNLEKHLKHFGLD-PTKMEKTAKSTMEMELDMNEKWEWSKCTEDG 307
Query: 303 KSLKHLQNGPEYGLGLLNLGNSCYLNSVLQVLLNGG-----IRNWNLDGLGSFPTDVVYP 357
L+ + GP Y GL+N G+SCY+NSVLQ L+ L+ L + P D ++
Sbjct: 308 LLLEPIF-GPGY-TGLVNTGSSCYMNSVLQALVTVDSFQTRYGEQGLETLVNCPLDKLH- 364
Query: 358 RTNLHCQLIKIRNAM-----TLQQSRYPEGIKPTTFKKVIGGSHEEFSSGRQQDSLEFFS 412
+ + Q K+ AM + + IKP FK+V G+H +FS+ +QQD E+
Sbjct: 365 -NDFNAQFSKVVRAMLSGDYSSEMDPTNNHIKPLQFKRVAAGNHRDFSTSKQQDVEEYIR 423
Query: 413 YLSDKLDREIFKNTTTNPNDLFRFNIQDKIKCDNCNKVKFMDQVSEVIQLPLRKLDGEQN 472
+L +K+ E + +P D F+F ++ + +V++ DQ +I+LP+
Sbjct: 424 FLFEKI-AENSRTEVIDPTDSFKFKAINRFEDRGTRRVRYTDQEEMLIRLPIS------- 475
Query: 473 LIDRLNDYFSGEKIEYRCLTNKKINTASKVPGFSSFPRTLIINPIRIELINWQPSKTSEQ 532
DY S E + TN +FP L ++ + T ++
Sbjct: 476 -----GDYISPITGEPKGATN--------TISMKTFPDYLF---FQVSKFAYNVDGTQKK 519
Query: 533 VVVPGVRDDALLDMSPFKATG-------ICXXXXXXXXXXSDSFQFNELFLGQLEQMGFS 585
+ + + + LD+S ++ G + D G+L MGF
Sbjct: 520 LDME-LEIEEELDLSGYRGHGKLEHEIALPDEEPTAPRTTPDIPASVRFVAGELMLMGFC 578
Query: 586 RNATKRALFETGNSDPNAATEWLFQHMEDPNLNEAF-DPHASSSAKNRVDSEALNSMTAM 644
NA RA + + N + A+ WL +HM+D ++N+ F P + SA+ VD + S+ M
Sbjct: 579 ENACYRAAYYS-NGNVEIASNWLMEHMDDSDINDLFVIPSGTPSARGEVDPNLVASIVEM 637
Query: 645 GLDSKLCRKALILKNGDVNASVEWVFSHMDD----------DGELPEAEEWKDQSRKSFG 694
G + + AL + V +VEW+F++MD + PE + ++K+F
Sbjct: 638 GFSNHQAKYAL-KQVPTVAEAVEWLFANMDSIPVESAAVGLSSDAPEPSVTESATQKTF- 695
Query: 695 IPASSIASAKYKLTAVICHKGNSVHSGHYVAFIKKVVEGKEQWVLYNDEKILLANDEPNF 754
KYKL +I H G+ SGHYVA + K EGK WVL+NDEK+ L+ D P
Sbjct: 696 ----KDGGEKYKLIGMISHMGSRPDSGHYVAHMLK--EGK--WVLFNDEKVALSQDPP-- 745
Query: 755 EDIEKNGYMFFF 766
+K Y++ +
Sbjct: 746 ---KKLAYVYLY 754
>At3g20625 [O] KOG0944 Ubiquitin-specific protease UBP14
Length = 401
Score = 159 bits (403), Expect = 1e-38
Identities = 123/419 (29%), Positives = 196/419 (46%), Gaps = 63/419 (15%)
Query: 388 FKKVIGGSHEEFSSGRQQDSLEFFSYLSDKLDREIFKNTTTNPNDLFRFNIQDKIKCDNC 447
FK VI SH EFSS RQQD+L+FF +L K++R +P+ F+F I++KI C +
Sbjct: 2 FKNVIAASHAEFSSMRQQDALDFFLHLVGKVERASNTTPDLDPSRSFKFGIEEKILCPS- 60
Query: 448 NKVKFMDQVSEVIQL--PLRKLDG----------------EQNLIDR-----------LN 478
KV + + ++ L PL + E+N ID L
Sbjct: 61 GKVGYNKREDCILSLNIPLHEATNKDELEAFHKQKAGKGLEENDIDEIVRPRVPLEACLA 120
Query: 479 DYFSGEKIE-YRCLTNKKINTASKVPGFSSFPRTLIINPIRIELIN-WQPSKTSEQVVVP 536
++ S E IE Y K + TA K G +SFP L+++ + + W P K + VP
Sbjct: 121 NFASSEPIEDYYSSALKGMTTAIKTTGLTSFPDYLVLHMRKFVMEEGWVPKKLDVYIDVP 180
Query: 537 GVRDDALLDMSPFKATGI-----CXXXXXXXXXXSDSFQ---FNELFLGQLEQMGFSRNA 588
V +D+S ++ G+ S + NE + QL MGFS+
Sbjct: 181 DV-----IDISHMRSKGLQPGEELLPDGGMLLYLSQEWSQPVANEEIVAQLVSMGFSQLH 235
Query: 589 TKRALFETGNSDPNAATEWLFQHMEDPNLNEAFDPHASSSAKNRVDSEALNSMTAMGLDS 648
++A T N+ A WL HM+DP+++ S +D +++++ + G
Sbjct: 236 CQKAAINTSNAGVEEAMNWLLSHMDDPDIDAPISHQTSD-----IDQSSVDTLLSFGFAE 290
Query: 649 KLCRKALILKNGDVNASVEWVFSHMDDD-GELPEAEEWKDQSRKSFGIPASSIASAKYKL 707
+ RKAL GD+ + +WVF++ + ++ + Q+ G+P KYKL
Sbjct: 291 DVARKALKASGGDIEKATDWVFNNPNASVSDMDVSSSNSAQTPAQSGLPD---GGGKYKL 347
Query: 708 TAVICHKGNSVHSGHYVAFIKKVVEGKEQWVLYNDEKILLANDEPNFEDIEKNGYMFFF 766
++ H G SVH GHYVA I K EG+ WV++ND+K+ ++ D P + GY++FF
Sbjct: 348 FGIVSHMGTSVHCGHYVAHILK--EGR--WVIFNDDKVGISTDPP-----KDMGYVYFF 397
>ECU03g0660 [O] KOG0944 Ubiquitin-specific protease UBP14
Length = 578
Score = 105 bits (263), Expect = 2e-22
Identities = 87/371 (23%), Positives = 172/371 (45%), Gaps = 36/371 (9%)
Query: 180 GGISQSCNDCGLTSNLWLCLHCGNVACGREQVGIEGYSHALKHYESTDGHALAIKLGSLT 239
GG+ CN C + + LW+C CG V CGR Q G EG HA HYE T H + + + SL
Sbjct: 120 GGLK--CNLCDVKTRLWVCFSCGYVGCGRMQYGAEGNGHAKSHYEETQ-HNVFVLVPSLL 176
Query: 240 ADAADIYCYSCDEDVKFTHNLQLQDI-LKFWEVEVPAKSKEKTLVELQ-----VEQSLKW 293
+ +I+CY CD +++ +N + + F + K++E+++ ++ E
Sbjct: 177 KEDCEIFCYLCDSNIRSRYNSAENSVTIDFGGAD--GKTEERSVRKVMSCRGIAEPEFLE 234
Query: 294 DFQMVDSQGKSLKHLQNGPEYGLGLLNLGNSCYLNSVLQVLLNGGIRNWNLDGLGSFPTD 353
+ +S+G+S+ P +G++N GN+CY++SV+ ++ + D F +
Sbjct: 235 KKRAPESKGESV------PSPYVGIINSGNTCYISSVIH-MVGYAVSKEEFDLEQHF--E 285
Query: 354 VVYPRTNLHCQLIKIRNAMT-LQQSRYPEGIKPTTFK---KVIGGSHEEFSSGRQQDSLE 409
+ Y + L C ++ ++ +++++ EG+ + +I F QQD+ E
Sbjct: 286 ICYMKNPLECFFCQLMRVLSKMKETKDNEGVNRISILDLIMLIWRDMPMFGKFAQQDAHE 345
Query: 410 FFSYLSDKLDREIFKNTTTNP-NDLFRFNIQDKIKCDNCNKVKFMDQVSEVIQLPLRKLD 468
F +L +K+ RE ++ P LF F + ++ C C MD + + +
Sbjct: 346 FLLFLLEKI-REGERSYLIPPITSLFEFEVGRRVSCSGC-----MDDSTSYESMLMICTF 399
Query: 469 GEQNLIDRLNDYFSGEKIEYRCLTNKKINTASKVPGFSSFPRTLIINPIRIELINWQPSK 528
+ N+ + +F ++ C KK++ ++ P+ LII R N++ K
Sbjct: 400 LKGNIRKSVEMFFLPDEWSCECGGKKKVSRF-----ITTLPKYLIIQVGRYSYNNYKVEK 454
Query: 529 TSEQVVVPGVR 539
+++ + ++
Sbjct: 455 IKDKIEMRSIK 465
>At3g20630 [O] KOG0944 Ubiquitin-specific protease UBP14
Length = 340
Score = 95.9 bits (237), Expect = 2e-19
Identities = 92/337 (27%), Positives = 159/337 (46%), Gaps = 46/337 (13%)
Query: 19 DCVYCFETMKNKDEGREHSLFICLRCFQSFSEEHWELHQEVVLSETGSTHDLYLRVFKVL 78
+C F+T ++ E LF+ + F +F +++ + E +TG+ +YL + +
Sbjct: 24 ECCISFDTPRS-----EGGLFVDMNSFLAFGKDYVSWNYE----KTGNP--VYLHIKQTR 72
Query: 79 KPKQEREEAGTXXXXXXXXXXVKDVNEDDLYDTHWLLGSVEHGELLSSDTPSIPKEWSDK 138
K E D NE + +++ + V + +S PS+ E +K
Sbjct: 73 KSIPEDRPLKKPTLLAIGVDGGFDNNEPEYEESYSI---VILPDFVSLPFPSV--ELPEK 127
Query: 139 I---------SEILQTKSSSYQDMSNTWTLELKSCP-HIQTFDLSNLEKREGGI-----S 183
+ ++ + ++ WT E K H T L++ + GI
Sbjct: 128 VFVSTMLIAVDTVVNAVGAERKEQVAAWTAEKKLISEHALT-----LQQIKSGIVIPPSG 182
Query: 184 QSCNDCGLTSNLWLCLHCGNVACGREQV-GIEGYSHALKHYESTDGHALAIKLGSLTAD- 241
C+ C T NLWL L G + CGR+ G G +HA++HY+ T + LA+KLG++TAD
Sbjct: 183 WKCSKCDKTENLWLNLTDGMILCGRKNWDGTGGNNHAVEHYKET-AYPLAVKLGTITADL 241
Query: 242 -AADIYCYSCDEDVKFTHNLQLQDILKFWEVEVPAKSK-EKTLVELQVEQSLKWDFQMVD 299
AAD+Y Y D+ V + L + L + ++ + K E T E +++Q+ +D+ +
Sbjct: 242 EAADVYSYPEDDSVL---DPLLAEHLAHFGIDFSSMQKTEMTTAERELDQNTNFDWNRIQ 298
Query: 300 SQGKSLKHLQNGPEYGLGLLNLGNSCYLNSVLQVLLN 336
GK L + GP Y GL+NLGNSCYL + +Q++ +
Sbjct: 299 ESGKELVPV-FGPGY-TGLVNLGNSCYLAATMQIVFS 333
>7295432 [O] KOG1865 Ubiquitin carboxyl-terminal hydrolase
Length = 577
Score = 73.2 bits (178), Expect = 1e-12
Identities = 64/237 (27%), Positives = 108/237 (45%), Gaps = 24/237 (10%)
Query: 313 EYGLGLLNLGNSCYLNSVLQVLLN-GGIRNWNLDGLGSFPTDVVYPRTNLHCQLIKIRNA 371
+ G G++N+GN+CYLNS LQ LL+ + NW L + D C + +
Sbjct: 169 QVGTGMINVGNTCYLNSTLQALLHIPALANW-LVSEQAHLADCNVAEPGSGCIICAMTKT 227
Query: 372 MTLQQSRYPEGIKPTTFKKVIGGSHEEFSSGRQQDSLEFFSYLSDKLDREI---FKN--- 425
+ QS ++P + + GRQ+D+ EF +L + ++R F+N
Sbjct: 228 LLATQSN-QSAVRPFLIYSKLKQICKHMVVGRQEDAHEFLRFLVEAMERAYLMRFRNYKE 286
Query: 426 ------TTTNPNDLFRFNIQDKIKCDNCNKVKFMDQVSEVIQLPLRKLDGEQNLIDRLND 479
TT +F ++ +++C +CN V Q + + L +RK D +L D
Sbjct: 287 LDQLVKETTPLGQIFGGYLRSEVRCLSCNHVSITFQHFQDLLLDIRKAD---SLEDAFEG 343
Query: 480 YFSGEKIE---YRCLTNKKINTASKVPGFSSFPRTLIINPIRIELINWQPSKTSEQV 533
+FS E++E Y+C KK +A+K P TL I R +I +K ++Q+
Sbjct: 344 HFSRERLEDMGYKCEGCKKKVSATKQFSLERAPITLCIQLKRFSMIG---NKLTKQI 397
>HsM18874088 [O] KOG1870 Ubiquitin C-terminal hydrolase
Length = 942
Score = 72.8 bits (177), Expect = 2e-12
Identities = 75/270 (27%), Positives = 113/270 (41%), Gaps = 32/270 (11%)
Query: 164 CPHIQTFDLSNLEKREGGISQSCNDCGLTS-NLWLCLH--CGNVACGREQVGIEGYSHAL 220
CPH+ + E +C DC + NLW CL C V CG QV H+
Sbjct: 39 CPHLDSVGEITKEDLIQKSLGTCQDCKVQGPNLWACLENRCSYVGCGESQV-----DHST 93
Query: 221 KHYESTDGHALAIKLGSLTADAADIYCYSCDEDVKFTHNLQLQDILKFWEVEVPAKSKEK 280
H + T H L + L +L ++CY+C ++V L Q L V P + +E
Sbjct: 94 IHSQETK-HYLTVNLTTLR-----VWCYACSKEVFLDRKLGTQPSLP--HVRQPHQIQEN 145
Query: 281 TLVELQVEQS------LKWDFQMVDSQGKSLKHLQNGPEYGL-GLLNLGNSCYLNSVLQV 333
++ + ++ + L F +D + L+ GL GL N+GN+CY+N+ LQ
Sbjct: 146 SVQDFKIPSNTTLKTPLVAVFDDLDIEADEEDELR---ARGLTGLKNIGNTCYMNAALQA 202
Query: 334 LLN-GGIRNWNLDGLGSFPTDVVYPRTNLHCQLIKIRNAMTLQQSRYPEGIKPTTFKKVI 392
L N + + LD G TD + +L+ L P + PTT + I
Sbjct: 203 LSNCPPLTQFFLDCGGLARTDKKPAICKSYLKLM-----TELWYKSRPGSVVPTTLFQGI 257
Query: 393 GGSHEEFSSGRQQDSLEFFSYLSDKLDREI 422
+ F QQD+ EF L D L E+
Sbjct: 258 KTVNPTFRGYSQQDAQEFLRCLMDLLHEEL 287
>Hs21489975 [O] KOG1870 Ubiquitin C-terminal hydrolase
Length = 911
Score = 72.8 bits (177), Expect = 2e-12
Identities = 75/270 (27%), Positives = 113/270 (41%), Gaps = 32/270 (11%)
Query: 164 CPHIQTFDLSNLEKREGGISQSCNDCGLTS-NLWLCLH--CGNVACGREQVGIEGYSHAL 220
CPH+ + E +C DC + NLW CL C V CG QV H+
Sbjct: 8 CPHLDSVGEITKEDLIQKSLGTCQDCKVQGPNLWACLENRCSYVGCGESQV-----DHST 62
Query: 221 KHYESTDGHALAIKLGSLTADAADIYCYSCDEDVKFTHNLQLQDILKFWEVEVPAKSKEK 280
H + T H L + L +L ++CY+C ++V L Q L V P + +E
Sbjct: 63 IHSQETK-HYLTVNLTTLR-----VWCYACSKEVFLDRKLGTQPSLP--HVRQPHQIQEN 114
Query: 281 TLVELQVEQS------LKWDFQMVDSQGKSLKHLQNGPEYGL-GLLNLGNSCYLNSVLQV 333
++ + ++ + L F +D + L+ GL GL N+GN+CY+N+ LQ
Sbjct: 115 SVQDFKIPSNTTLKTPLVAVFDDLDIEADEEDELR---ARGLTGLKNIGNTCYMNAALQA 171
Query: 334 LLN-GGIRNWNLDGLGSFPTDVVYPRTNLHCQLIKIRNAMTLQQSRYPEGIKPTTFKKVI 392
L N + + LD G TD + +L+ L P + PTT + I
Sbjct: 172 LSNCPPLTQFFLDCGGLARTDKKPAICKSYLKLM-----TELWYKSRPGSVVPTTLFQGI 226
Query: 393 GGSHEEFSSGRQQDSLEFFSYLSDKLDREI 422
+ F QQD+ EF L D L E+
Sbjct: 227 KTVNPTFRGYSQQDAQEFLRCLMDLLHEEL 256
>Hs5730108 [O] KOG1870 Ubiquitin C-terminal hydrolase
Length = 913
Score = 69.7 bits (169), Expect = 2e-11
Identities = 72/264 (27%), Positives = 108/264 (40%), Gaps = 29/264 (10%)
Query: 164 CPHIQTFDLSNLEKREGGISQSCNDCGLTS-NLWLCLHCGNVACGREQVGIEGYSHALKH 222
CPH+ + E +C CG+T NLW CL VAC G H+ H
Sbjct: 8 CPHLDSIGEVTKEDLLLKSKGTCQSCGVTGPNLWACLQ---VACPYVGCGESFADHSTIH 64
Query: 223 YESTDGHALAIKLGSLTADAADIYCYSCDEDVKFTHNLQ---LQDILKFWEVEVPAKSKE 279
++ H L + L + ++CY+C+++V L L KF E + P S
Sbjct: 65 AQAKK-HNLTVNLTTFR-----LWCYACEKEVFLEQRLAAPLLGSSSKFSEQDSPPPSHP 118
Query: 280 KTLVELQVEQSLKWDFQMVDSQGKSLKHLQNGPEYGLGLLNLGNSCYLNSVLQVLLN-GG 338
V + V D +S+ LK P G+ NLGNSCY+N+ LQ L N
Sbjct: 119 LKAVPIAVA-----DEGESESEDDDLK-----PRGLTGMKNLGNSCYMNAALQALSNCPP 168
Query: 339 IRNWNLDGLGSFPTDVVYPRTNLHCQLIKIRNAMTLQQSRYPEGIKPTTFKKVIGGSHEE 398
+ + L+ G TD + +L+ + + P + PT+ I +
Sbjct: 169 LTQFFLECGGLVRTDKKPALCKSYQKLVS-----EVWHKKRPSYVVPTSLSHGIKLVNPM 223
Query: 399 FSSGRQQDSLEFFSYLSDKLDREI 422
F QQD+ EF L D+L E+
Sbjct: 224 FRGYAQQDTQEFLRCLMDQLHEEL 247
>Hs5454156 [O] KOG1873 Ubiquitin-specific protease
Length = 823
Score = 69.3 bits (168), Expect = 2e-11
Identities = 93/372 (25%), Positives = 154/372 (41%), Gaps = 59/372 (15%)
Query: 144 QTKSSSYQDMSNTWTLELKSCPHIQT-FDLSNLEKREGGISQS-CNDCGLTS-------- 193
+TK + ++ TLE C HI+ + NL+K + + C DC +
Sbjct: 5 RTKGKTVPIDDSSETLE-PVCRHIRKGLEQGNLKKALVNVEWNICQDCKTDNKVKDKAEE 63
Query: 194 ------NLWLCLHCGNVACGREQVGIEGYSHALKHY--ESTDGHALAIKLGSLTADAADI 245
++WLCL CG+ CGR HALKHY ++ H L + L D +
Sbjct: 64 ETEEKPSVWLCLKCGHQGCGRN----SQEQHALKHYLTPRSEPHCLVLSL-----DNWSV 114
Query: 246 YCYSCDEDVKFTHNLQLQDILKFWEVEV------PAKSKEKTLVELQVEQSLKWDFQMVD 299
+CY CD +V++ + QL ++ + + PA+ K+ +EL+ ++ K +
Sbjct: 115 WCYVCDNEVQYCSSNQLGQVVDYVRKQASITTPKPAE-KDNGNIELENKKLEKESKNEQE 173
Query: 300 SQGKSLKHLQNGPEYG------LGLLNLGNSCYLNSVLQVLLNGGIRNWNLDGLGSFPTD 353
+ K +N P GL NLGN+C+ N+V+Q L + L + T
Sbjct: 174 REKKENMAKENPPMNSPCQITVKGLSNLGNTCFFNAVMQNLSQTPVLRELLKEVKMSGTI 233
Query: 354 V-VYPRTNLHCQLIKIR----NAMTLQQSRYPEGIKPTTFKKVIGGSHEEFS-------- 400
V + P + ++I +TL S++ ++ T KK + E FS
Sbjct: 234 VKIEPPDLALTEPLEINLEPPGPLTLAMSQFLNEMQET--KKGVVTPKELFSQVCKKAVR 291
Query: 401 --SGRQQDSLEFFSYLSDKLDREIFKNTTTNPNDLFRFNIQDKIKCDNCNKVKFMDQVSE 458
+QQDS E YL D + E + + F N +K+ + NKVK ++
Sbjct: 292 FKGYQQQDSQELLRYLLDGMRAEEHQRVSKGILKAFG-NSTEKLDEELKNKVKDYEKKKS 350
Query: 459 VIQLPLRKLDGE 470
+ R GE
Sbjct: 351 MPSFVDRIFGGE 362
>SPAC23G3.08c [O] KOG1873 Ubiquitin-specific protease
Length = 875
Score = 65.1 bits (157), Expect = 4e-10
Identities = 68/259 (26%), Positives = 101/259 (38%), Gaps = 42/259 (16%)
Query: 195 LWLCLHCGNVACGREQVGIEGYSHALKHYESTDGHALAIKLGSLTADAADIYCYSCDEDV 254
L LC +CG + C + H+ KH+E H + + + +L +CYSCD D+
Sbjct: 98 LTLCANCGYLFCCNHES-----DHSRKHFEKNKKHCVFVNIITLKC-----HCYSCDADI 147
Query: 255 KF--THNLQLQDILKFWEVEVPAKSKEKTLVELQVEQSLKWDFQMVDSQGKSLKHLQNGP 312
NL ++D+ +F + + + V K + + S GKS K +
Sbjct: 148 VIFDKKNLVVRDVQQFICSNLVSSLTKAPNVLKSNSSHFKKEKKSKHSSGKSSKKYK--- 204
Query: 313 EYGLGLLNLGNSCYLNSVLQVLLNGGIRNWNLDGLGSFPTDVVYPRTNLHCQLIKIRNAM 372
GL NLG +C+ NS LQVL + DV+ P H +I +
Sbjct: 205 VISPGLKNLGATCFFNSTLQVLCACEALH-----------DVISPFQYSHSSVIVRKLTK 253
Query: 373 TLQQSRYPEGIK----------------PTTFKKVIGGSHEEFSSGRQQDSLEFFSYLSD 416
+ + S IK PTTF H +FS QQD+ E L D
Sbjct: 254 SPESSLLSAFIKFLETFYKSDGTISVYRPTTFFGEFRRLHPQFSESVQQDAHELLRLLLD 313
Query: 417 KLDREIFKNTTTNPNDLFR 435
L E F+ N N + R
Sbjct: 314 DLISEEFRVLRFNLNSVSR 332
>Hs14249724 [O] KOG1873 Ubiquitin-specific protease
Length = 289
Score = 61.6 bits (148), Expect = 4e-09
Identities = 45/147 (30%), Positives = 72/147 (48%), Gaps = 19/147 (12%)
Query: 191 LTSNLWLCLHCGNVACGREQVGIEGYSHALKHYES--TDGHALAIKLGSLTADAADIYCY 248
LTS++WLCL CG CG+ H+LKH++S T+ H + I L + I+CY
Sbjct: 78 LTSDIWLCLKCGFQGCGKNSES----QHSLKHFKSSRTEPHCIIINLSTWI-----IWCY 128
Query: 249 SCDEDVKFTHNLQ-LQDILKFWEVEVPAKSKEKTLVELQVEQSLKWDFQMVDSQGKSLKH 307
CDE + N + L I+ F + +K++ + K + + GK ++
Sbjct: 129 ECDEKLSTHCNKKVLAQIVDFLQKHA-SKTQTSAFSRIMKLCEEKCETDEIQKGGK-CRN 186
Query: 308 LQNGPEYGLGLLNLGNSCYLNSVLQVL 334
L G+ NLGN+C+ N+V+Q L
Sbjct: 187 LS-----VRGITNLGNTCFFNAVMQNL 208
>SPCC1682.12c [O] KOG1865 Ubiquitin carboxyl-terminal hydrolase
Length = 457
Score = 60.8 bits (146), Expect = 7e-09
Identities = 60/237 (25%), Positives = 100/237 (41%), Gaps = 26/237 (10%)
Query: 317 GLLNLGNSCYLNSVLQVLL-NGGIRNWNLDGLGSFPTDV---VYPRTNLHCQLIKIRNAM 372
GL+NLGN+C++NSVLQ++ + + L G S + V R H + A
Sbjct: 126 GLVNLGNTCFMNSVLQLMTQTPPLVQYLLSGQHSLSCRMNACVLCRMEQH-----VARAY 180
Query: 373 TLQQSRYPEGIKPTTFKKVIGGSHEEFSSGRQQDSLEFFSYLSDKLDREIFKN------- 425
+ ++ KP+ + ++ F RQ+D+ EF YL D + +N
Sbjct: 181 PNKGTKRASAFKPSGIQSMLKVISSHFRPYRQEDAHEFMRYLVDAWQKSCLQNHKNLDHP 240
Query: 426 --TTTNPNDLFRFNIQDKIKCDNCNKVKFMDQVSEVIQLPLRKLDGEQNLIDRLNDYFSG 483
T+ + +F ++ +I C C K Q + + + +L D L +
Sbjct: 241 SRETSVVHRIFGGYLRQQILCSVCKKPSNTYQALLDLSVDAK----GSSLADSLKHFVHA 296
Query: 484 EKI----EYRCLTNKKINTASKVPGFSSFPRTLIINPIRIELINWQPSKTSEQVVVP 536
EK+ +YRC K++ ASK P L I+ R +Q SK S+Q+ P
Sbjct: 297 EKLTKQNKYRCENCKQLVDASKQMTIYRAPNILTIHFKRFTFNGFQSSKISKQISYP 353
>Hs20540195 [O] KOG1865 Ubiquitin carboxyl-terminal hydrolase
Length = 823
Score = 58.5 bits (140), Expect = 4e-08
Identities = 72/298 (24%), Positives = 118/298 (39%), Gaps = 30/298 (10%)
Query: 223 YESTDGHALAIKLGSLTADAADIYCYSCDEDVKFTHNLQLQDI---LKFWEVEVPAKSKE 279
Y++ G + A+ G + A +A S DV H L L + + + VP KSK
Sbjct: 16 YQNQPGSSEAVSPGDMDAGSASWGAVSSLNDVS-NHTLSLGPVPGAVVYSSSSVPDKSKP 74
Query: 280 KTLVELQVEQSLKWDFQMVDSQGKSLKHLQNGPEYGLGLLNLGNSCYLNSVLQVL-LNGG 338
+ + + +++ K Q G GL NLGN+C+ N+ LQ L
Sbjct: 75 SPQKDQALGDGIAPPQKVLFPSEKICLKWQQTHRVGAGLQNLGNTCFANAALQCLTYTPP 134
Query: 339 IRNWNLDGLGSFPTDVVYPRTNLHCQLIKIRNAMTLQQSRYPEGIKPTTFKKVIGGSHEE 398
+ N+ L S C + ++ +T S + IKP +
Sbjct: 135 LANYMLSHEHSKTC-----HAEGFCMMCTMQAHITQALSNPGDVIKPMFVINEMRRIARH 189
Query: 399 FSSGRQQDSLEFFSYL-----------SDKLDREIFKNTTTNPNDLFRFNIQDKIKCDNC 447
F G Q+D+ EF Y S+KLDR TT +F ++ ++KC NC
Sbjct: 190 FRFGNQEDAHEFLQYTVDAMQKACLNGSNKLDRH--TQATTLVCQIFGGYLRSRVKCLNC 247
Query: 448 NKVKFMDQVSEVIQLPLRKLDGEQNLIDRLNDYFSGEKIE----YRCLTNKKINTASK 501
V D + + L ++ Q++ L + E+++ Y+C KK+ ASK
Sbjct: 248 KGVS--DTFDPYLDITL-EIKAAQSVNKALEQFVKPEQLDGENSYKCSKCKKMVPASK 302
>Hs14149817 [O] KOG1867 Ubiquitin-specific protease
Length = 712
Score = 58.2 bits (139), Expect = 5e-08
Identities = 31/96 (32%), Positives = 49/96 (50%), Gaps = 11/96 (11%)
Query: 159 LELKSCPHIQTFDLSNLEKREGGISQSCNDCGLTSNLWLCLHCGNVACGREQVGIEGYSH 218
L + +C H+ L+ C DC T ++W CL C +VACGR IE H
Sbjct: 2 LAMDTCKHVGQLQLAQDHSSLNPQKWHCVDCNTTESIWACLSCSHVACGRY---IE--EH 56
Query: 219 ALKHYESTDGHALAIKLGSLTADAADIYCYSCDEDV 254
ALKH++ + H +A+++ + ++CY CD+ V
Sbjct: 57 ALKHFQES-SHPVALEVNEMY-----VFCYLCDDYV 86
>Hs13994268 [O] KOG1868 Ubiquitin C-terminal hydrolase
Length = 913
Score = 58.2 bits (139), Expect = 5e-08
Identities = 64/252 (25%), Positives = 104/252 (40%), Gaps = 40/252 (15%)
Query: 317 GLLNLGNSCYLNSVLQVLLNGGIRNWNLDGLG-SFPTDVVYPRTNLHC--QLIKIRNAMT 373
GL NLGN+CY+N+VLQ LL+ I ++ D L SFP + C +L+ ++
Sbjct: 296 GLPNLGNTCYMNAVLQSLLS--IPSFADDLLNQSFPWGKIPLNALTMCLARLLFFKDTYN 353
Query: 374 LQQSRYPEGIKPTTFKKVIGGSHEEFSSGRQQDSLEFFSYLSDKLDREIFK-NTTTNPND 432
++ + KK I + E F Q D+ EF ++ D+L + K NT P
Sbjct: 354 IEIKE----MLLLNLKKAISAAAEIFHGNAQNDAHEFLAHCLDQLKDNMEKLNTIWKPKS 409
Query: 433 ---------------------------LFRFNIQDKIKCDNCNKVKFMDQVSEV--IQLP 463
F + I C C +V +++ I LP
Sbjct: 410 EFGEDNFPKQVFADDPDTSGFSCPVITNFELELLHSIACKACGQVILKTELNNYLSINLP 469
Query: 464 LRKLDGEQNLIDRLNDYFSGEKIEYRCLTNKKINTASKVPGFSSFPRTLIINPIRIELIN 523
R ++ + +F E++EY+C + T+ V FS PR LI++ R L
Sbjct: 470 QRIKAHPSSIQSTFDLFFGAEELEYKC-AKCEHKTSVGVHSFSRLPRILIVHLKRYSLNE 528
Query: 524 WQPSKTSEQVVV 535
+ K ++Q V+
Sbjct: 529 FCALKKNDQEVI 540
>CE28903 [R] KOG0804 Cytoplasmic Zn-finger protein BRAP2 (BRCA1 associated
protein)
Length = 590
Score = 57.0 bits (136), Expect = 1e-07
Identities = 24/53 (45%), Positives = 35/53 (65%), Gaps = 6/53 (11%)
Query: 184 QSCNDCGLTSNLWLCLHCGNVACGREQVGIEGYSHALKHYESTDGHALAIKLG 236
Q CNDCG++++LW+CL CGN+ CGR HA +H+E T H ++K+G
Sbjct: 308 QRCNDCGMSNDLWICLICGNIGCGR-----YAEQHAQRHWELT-SHTYSLKVG 354
>YHL010c [R] KOG0804 Cytoplasmic Zn-finger protein BRAP2 (BRCA1 associated
protein)
Length = 585
Score = 56.6 bits (135), Expect = 1e-07
Identities = 25/49 (51%), Positives = 29/49 (59%), Gaps = 5/49 (10%)
Query: 178 REGGISQSCNDCGLTSNLWLCLHCGNVACGREQVGIEGYSHALKHYEST 226
++ G S C CG T NLW+CL CGNV CGR HA+KHYE T
Sbjct: 293 KQAGDSAHCATCGSTDNLWICLICGNVGCGR-----YNSKHAIKHYEET 336
>CE26241 [O] KOG1867 Ubiquitin-specific protease
Length = 664
Score = 56.2 bits (134), Expect = 2e-07
Identities = 31/91 (34%), Positives = 44/91 (48%), Gaps = 11/91 (12%)
Query: 177 KREGGISQSCNDCGLTSNLWLCLHCGNVACGREQVGIEGYSHALKHYESTDGHALAIKLG 236
K + I C++C + +CL CG + CGR G HAL H+E T H + I
Sbjct: 44 KNQEIIKTFCDECDNCNKSLMCLTCGRILCGRNDSG-----HALHHFEET-SHPVVIDCI 97
Query: 237 SLTADAADIYCYSCDEDVKFTHNLQLQDILK 267
S ++YCYSCD++V L +LK
Sbjct: 98 SF-----ELYCYSCDDEVSLDFEPSLYGVLK 123
Score = 55.1 bits (131), Expect = 4e-07
Identities = 56/209 (26%), Positives = 88/209 (41%), Gaps = 27/209 (12%)
Query: 317 GLLNLGNSCYLNSVLQVLLN-GGIRNW--NLDGLGSFPTDVVYPRT-NLHCQLIKIRNAM 372
G+ N+GN+C++N+VLQ L + R + +L L + D P+ +C L +
Sbjct: 379 GMRNVGNTCFMNAVLQALASISEFREYIMSLSSLEDYIHDEKEPKNGGNYCYLTDEYRKL 438
Query: 373 TLQQS--RYPEGIKPTTFKKVIGGSHEEFSSGRQQDSLEFFSYLSDKLDREIFK------ 424
+ QS + E P F++ F RQ DS EF Y D L E+ K
Sbjct: 439 LISQSARSFREPTAPNEFREAFISVCPRFRGFRQHDSHEFMRYFMDSLHTEMRKCRKLPG 498
Query: 425 ---NTTTNPNDLFRFNIQDKIKCDNC----NKV-KFMDQVSEVIQLPLRKLDGEQNLIDR 476
+ T + F +Q + C C NK+ +FMD + +P ++ + L D
Sbjct: 499 MPDDKHTPISKYFEGTLQSSVICQTCRNCSNKIDEFMDL---SLDIPAQRNASKVRLSDC 555
Query: 477 LNDYFSGEKIEY----RCLTNKKINTASK 501
L+ +F E +E C K T SK
Sbjct: 556 LSTFFKLEMLEKGEKPECAKCKTKQTCSK 584
>Hs21361749 [O] KOG1867 Ubiquitin-specific protease
Length = 640
Score = 55.8 bits (133), Expect = 2e-07
Identities = 33/91 (36%), Positives = 46/91 (50%), Gaps = 11/91 (12%)
Query: 164 CPHIQTFDLSNLEKREGGISQSCNDCGLTSNLWLCLHCGNVACGREQVGIEGYSHALKHY 223
C H+ L+ C +C T ++W CL C +VACGR IE HALKH+
Sbjct: 4 CKHVGRLRLAQDHSILNPQKWCCLECATTESVWACLKCSHVACGRY---IE--DHALKHF 58
Query: 224 ESTDGHALAIKLGSLTADAADIYCYSCDEDV 254
E T GH LA+++ L ++CY C + V
Sbjct: 59 EET-GHPLAMEVRDLY-----VFCYLCKDYV 83
>SPAC13A11.04c [O] KOG1867 Ubiquitin-specific protease
Length = 449
Score = 55.1 bits (131), Expect = 4e-07
Identities = 91/364 (25%), Positives = 154/364 (42%), Gaps = 43/364 (11%)
Query: 182 ISQSCNDCGLTSNLWL-CLHCGNVACGREQVGIEGYSHALKHYESTDGHALAIKLGSLTA 240
+ + C+ C + + CL C +V C G G HA++H H + + + +
Sbjct: 34 VPRRCSTCKRINKRSIRCLSCHSVGC---LWGHHGEEHAMEHT-----HMIGVDVKN--- 82
Query: 241 DAADIYCYSCDEDVKFTHNLQLQDILKFWEVEVPA-KSKEKTLVELQVEQSLKWDFQMVD 299
YC+ C + V T + L+F + A +S K L E K++ QMV
Sbjct: 83 --GHTYCFGCQDYVYQTE----LETLRFKIKNIKAWQSDHKRLPE-------KYN-QMVC 128
Query: 300 SQGKSLKHLQNGPEYGL-GLLNLGNSCYLNSVLQ-VLLNGGIRNWNLDGLGSFPTDVVYP 357
+ K+ GL G+ NLG +C+++ +LQ +L N +RN G + TD P
Sbjct: 129 LEAYR-KYPPVCATAGLRGIQNLGATCFMSVILQSILHNPLVRNLFFSGFHT-STDCKRP 186
Query: 358 RTNLHCQLIKIRNAMTLQQSRYPEGIKPTTFKKVIGGSHEEFSSGRQQDSLEFFSYLSDK 417
T + C + + +++ +++ PT ++ + QQD EFF YL D+
Sbjct: 187 -TCMTCAIDDMFSSIYNSKNK-STFYGPTAVLNLMWKLSKSLCGYSQQDGHEFFVYLLDQ 244
Query: 418 LDREIFKNT----TTNPNDLFRFNIQDKIKCDNCNKVKFMDQVSEVIQLPLRKLDGEQNL 473
+ E T T + +F ++++ + C +C K + I L + E L
Sbjct: 245 MHTESGGGTSMPCTCPIHRIFSGSLKNVVTCLDCKKERVAVDPLMDISLDI----NEPTL 300
Query: 474 IDRLNDYFSGEKIEYRCLTNKKINTASKVPGFSSFPRTLIINPIRIELINWQPS-KTSEQ 532
L + S EK++Y C + N A K F P T+ + R E N+ S K +Q
Sbjct: 301 QGCLERFVSKEKVQYSCHSCGSKN-AIKQLVFDKLPPTICMQLKRFEQNNFAMSTKIDKQ 359
Query: 533 VVVP 536
V P
Sbjct: 360 VSYP 363
>CE27053 [O] KOG1864 Ubiquitin-specific protease
Length = 515
Score = 55.1 bits (131), Expect = 4e-07
Identities = 56/233 (24%), Positives = 103/233 (44%), Gaps = 32/233 (13%)
Query: 318 LLNLGNSCYLNSVLQVLLNGG-----------IRNWNLDGLG--SFPTDVVYPRTNLHCQ 364
L+N GNSC+LNS +Q L + + N+D + ++V+ + +
Sbjct: 147 LVNTGNSCFLNSTMQALSSCHSFALRCEQLYCLVRKNIDYFDNEASHSEVLCRKYRVLID 206
Query: 365 LIKIRNAMTLQQS---RYPEGIKPT--TFKKVIGGSHEEFSSGRQQDSLEFF-------- 411
+KI A+T + + PE I+ TF+++IG +F++ QQD+ EF
Sbjct: 207 FLKIMAALTKRSNSSKTQPEIIEANLQTFRELIGMIRNDFANKNQQDAHEFLLMLFEAID 266
Query: 412 ---SYLSDKLDREIFKNTTTNPNDLFRFNIQDKIKCDNCNKVKFMDQVSEVIQLPLRKLD 468
Y +D ++ + NP + F+FN++ C C+K + V + + +R
Sbjct: 267 DVAEYKADNEGDDVKEAKQLNPIEAFKFNVETCYVCKGCSKEEVRVDVRNDLAVHMRDNL 326
Query: 469 GEQNLIDRLNDYFSGEKIEYRCLTNKKINTASKVPGFSSFPRTLIINPIRIEL 521
Q L+ + + + IE +C ++ A + FP L+IN R +L
Sbjct: 327 SVQELLS--SSFSTWTPIEKKC-SSCNHQHAILSERITRFPECLVINLERYQL 376
>CE09811 [O] KOG1863 Ubiquitin carboxyl-terminal hydrolase
Length = 1230
Score = 55.1 bits (131), Expect = 4e-07
Identities = 57/205 (27%), Positives = 93/205 (44%), Gaps = 15/205 (7%)
Query: 317 GLLNLGNSCYLNSVLQVLLN-GGIRNWNLDGLGS---FPTDVVYPRTNLHCQLIKIRNAM 372
GL+N GN CY+NS LQV N R D S P + PR N+ ++ +++
Sbjct: 109 GLINGGNFCYVNSFLQVWFNVPEFRQLIYDFRPSENFVPPEA--PRMNVQATMLALQDIF 166
Query: 373 -TLQQSRYPEGIKPTTFKKVIGGSHEEFSSGRQQDSLEFFSYLSDKL-DREIFKNTTTNP 430
TLQ + + E K + K++ + E+ S Q+ L+FF+ L L D K T
Sbjct: 167 YTLQTTPFNETDKTSNLGKLLRLNSEQQDS--QEFGLKFFNALERCLPDHPNGKETLKRL 224
Query: 431 NDLFRFNIQDKIKCDNCNKVKFMDQVSEVIQLPLRKLDGEQNLIDRLNDYFSGEKI-EYR 489
DLF +I C C + ++ + + L ++G L+D L+ YF E + +++
Sbjct: 225 KDLFTGETCTRIVC-KCGQRSEREETAISLTL---NIEGYCTLLDALDAYFGEEHLDDFK 280
Query: 490 CLTNKKINTASKVPGFSSFPRTLII 514
C K SK + P ++I
Sbjct: 281 CSKCNKTGDVSKQSDYVKLPPVIVI 305
>7290583 [O] KOG1873 Ubiquitin-specific protease
Length = 1126
Score = 55.1 bits (131), Expect = 4e-07
Identities = 30/71 (42%), Positives = 42/71 (58%), Gaps = 14/71 (19%)
Query: 193 SNLWLCLHCGNVACGREQVGIEGYSHALKHYES--TDGHALAIKLGSLTADAADIYCYSC 250
+ LWLCL CG+ CGR + + HAL+HY++ +D HALA+ S DI+CY C
Sbjct: 106 NTLWLCLKCGSQLCGRAR-----HKHALEHYQTPHSDSHALAMNTRSF-----DIWCYEC 155
Query: 251 DEDVKFTHNLQ 261
D+K NL+
Sbjct: 156 --DMKICSNLR 164
>SPCC16A11.12c [O] KOG1870 Ubiquitin C-terminal hydrolase
Length = 849
Score = 54.7 bits (130), Expect = 5e-07
Identities = 47/153 (30%), Positives = 76/153 (48%), Gaps = 13/153 (8%)
Query: 281 TLVELQV-EQSLKWDFQMVDSQ--GKSLKHLQN---GPEYGL-GLLNLGNSCYLNSVLQV 333
T+ E+ + + SL +FQ + + S+ QN E GL GL NLGNSCY+NS LQ
Sbjct: 237 TIFEIDIADGSLLLEFQHPNGEWLSDSITKEQNLTINKEIGLCGLYNLGNSCYMNSALQC 296
Query: 334 LLNGG-IRNWNLDGLGSFPTDVVYPRTNLHCQLIKIRNAMTLQQSRYP---EGIKPTTFK 389
+++ + + L S+ D+ Y + + A L+ + + P++FK
Sbjct: 297 MIHTHELTKYFLSD--SYEKDINYNNPLGMMGKVALSYASLLKMIHHTADMHSVSPSSFK 354
Query: 390 KVIGGSHEEFSSGRQQDSLEFFSYLSDKLDREI 422
+IG + FS RQQDS EF ++ D L ++
Sbjct: 355 FIIGEFNTYFSGYRQQDSQEFIAFFLDGLHEDL 387
>At5g10790 [O] KOG1867 Ubiquitin-specific protease
Length = 557
Score = 54.3 bits (129), Expect = 7e-07
Identities = 74/321 (23%), Positives = 131/321 (40%), Gaps = 40/321 (12%)
Query: 186 CNDCGL-TSNLWLCLHCGNVACGREQVGIEGYSHALKHYESTDGHALAIKLGSLTADAAD 244
C+ C + L++CL C +++C SH L H + GH +AI + + ++
Sbjct: 56 CSYCSVYQKRLYICLICRSISCS---------SHILLHTQLNKGHDIAIDV-----ERSE 101
Query: 245 IYCYSCDEDVKFTHNLQLQDILKFWEVEVPAKSKEKTLVELQVEQSLKWDFQMVDSQGKS 304
+YC +C + V + ++ + + + + KS +V ++ + + D Q++
Sbjct: 102 LYCCACIDQVYDSEFDEVVVSKQLFGLGMSVKSGAD-VVAVRSNKKRRLDSQLIIGSNFL 160
Query: 305 LKHLQNGPEY----GL-GLLNLGNSCYLNSVLQVLLNG-GIRNWNLDGLGSFPTDVVYPR 358
+ ++ GL GL NLG++C++N+VLQ L++ +RN+ L G D+ R
Sbjct: 161 VSPRDRREKWTFPLGLRGLNNLGSTCFMNAVLQALVHAPPLRNFWLS--GQHNRDLCPRR 218
Query: 359 TN----LHCQLIKIRNAMTLQQSRYPEGIKPTTFKKVIGGSHEEFSSGRQQDSLEFFSYL 414
T L C L I +AM R P P ++ QQDS EFF L
Sbjct: 219 TMGLLCLPCDLDVIFSAM-FSGDRTP--YSPAHLLYSWWQHSTNLATYEQQDSHEFFISL 275
Query: 415 SDKLDREIFKNTTTNPND---------LFRFNIQDKIKCDNCNKVKFMDQVSEVIQLPLR 465
D++ K+ ++ F ++ + C C I L L
Sbjct: 276 LDRIHENEGKSKCLYQDNEECQCITHKAFSGLLRSDVTCTTCGSTSTTYDPFIDISLTLD 335
Query: 466 KLDGEQNLIDRLNDYFSGEKI 486
++G R N Y G +
Sbjct: 336 SMNGFSPADCRKNRYSGGPSV 356
>Hs13435157 [O] KOG1865 Ubiquitin carboxyl-terminal hydrolase
Length = 548
Score = 53.9 bits (128), Expect = 9e-07
Identities = 55/206 (26%), Positives = 85/206 (40%), Gaps = 32/206 (15%)
Query: 315 GLGLLNLGNSCYLNSVLQVLLNGGIRNWNLDGLGSFPTDVVYPRT---NLHCQLIKIRNA 371
G GL NLGN+C+LN+ +Q L L ++ + R+ C L ++N
Sbjct: 121 GAGLHNLGNTCFLNATIQCLT-------YTPPLANYLLSKEHARSCHQGSFCMLCVMQNH 173
Query: 372 MTLQQSRYPEGIKPTTFKKVIGGSHEEFSSGRQQDSLEFFSYLSD-----------KLDR 420
+ + IKP +F + + F G Q+D+ EF Y D KLDR
Sbjct: 174 IVQAFANSGNAIKPVSFIRDLKKIARHFRFGNQEDAHEFLRYTIDAMQKACLNGCAKLDR 233
Query: 421 EIFKNTTTNPNDLFRFNIQDKIKCDNCNKVKFMDQVSEVIQLPLRKLDGEQNLIDRLN-- 478
+ TT + +F ++ ++KC C V D + + L ++ N++ L
Sbjct: 234 Q--TQATTLVHQIFGGYLRSRVKCSVCKSVS--DTYDPYLDVAL-EIRQAANIVRALELF 288
Query: 479 ---DYFSGEKIEYRCLTNKKINTASK 501
D SGE Y C KK ASK
Sbjct: 289 VKADVLSGEN-AYMCAKCKKKVPASK 313
>CE05829 [O] KOG1864 Ubiquitin-specific protease
Length = 781
Score = 53.9 bits (128), Expect = 9e-07
Identities = 25/72 (34%), Positives = 40/72 (54%), Gaps = 1/72 (1%)
Query: 698 SSIASAKYKLTAVICHKGNSVHSGHYVAFIKKVVEGKEQWVLYNDEKILLANDEPNFEDI 757
S I Y L AV+CH G+S + GHYVA+ K++ + W+ +D+ I + E I
Sbjct: 711 SDIHPGTYSLVAVVCHLGDSPNKGHYVAYTKELYK-NSSWLRCSDDNIYAVSKNDVSEAI 769
Query: 758 EKNGYMFFFNLE 769
+GY+ F+ L+
Sbjct: 770 RSSGYLMFYELQ 781
>At2g32780 [O] KOG1873 Ubiquitin-specific protease
Length = 1083
Score = 53.9 bits (128), Expect = 9e-07
Identities = 55/203 (27%), Positives = 90/203 (44%), Gaps = 25/203 (12%)
Query: 137 DKISEILQTKSSSYQDMSNTWTLELKSCPHIQTFDLSNLEKREGGISQSCNDCGLTSNLW 196
DK+ +I++ SYQ + E H++ R S S +C + +W
Sbjct: 42 DKLLKIIK----SYQQIKCG---ECNERVHVKRGSRWGASNRRDWYSSSDQNCARNA-IW 93
Query: 197 LCLHCGNVACGREQVGIEGYSHALKHYESTDGHALAIKLGSLTADAADIYCYSCDEDVKF 256
LCL CG CG + E SH + H T H L I+ + +C+SC + F
Sbjct: 94 LCLECGYYVCGDVGLPTEAQSHVMGHNRLT-RHRLVIQCKNPQLR----WCFSCQSLLPF 148
Query: 257 TH--NLQLQDILKFWEVEVPAKSKEKTLVELQVEQSLKWDFQMVDSQGKSLKHLQNGPEY 314
+ N + +D+L +EV +E++ S + +F G ++ Y
Sbjct: 149 DNEENGEKKDLL----LEVVKLIRERS--PNTYSASFETEF---SCSGSIYGGIEARDGY 199
Query: 315 GL-GLLNLGNSCYLNSVLQVLLN 336
+ GL+NLGN+C+ NSV+Q LL+
Sbjct: 200 AVRGLVNLGNTCFFNSVMQNLLS 222
>Hs22043041 [O] KOG1866 Ubiquitin carboxyl-terminal hydrolase
Length = 959
Score = 53.5 bits (127), Expect = 1e-06
Identities = 64/255 (25%), Positives = 109/255 (42%), Gaps = 39/255 (15%)
Query: 316 LGLLNLGNSCYLNSVLQVL-LNGGIRNWNLDGLGSFPTDVVYPRTNLHCQLIKIRNAMTL 374
+GL N G +CY+N+V Q L + G+ + L S D P ++ Q+ + +
Sbjct: 28 VGLRNGGATCYMNAVFQQLYMQPGLP----ESLLSVDDDTDNPDDSVFYQVQSLFGHLME 83
Query: 375 QQSRYPEGIKPTTFKKVIGGSHEEFSSGRQQDSLEFFSYLSDKLDR--------EIFKNT 426
+ +Y P F K+ ++E QQD+ EFF+ L D++D +IFKNT
Sbjct: 84 SKLQY---YVPENFWKIFKMWNKELYVREQQDAYEFFTSLIDQMDEYLKKMGRDQIFKNT 140
Query: 427 TTNPNDLFRFNIQDKIKCDNCNKVKFMDQVSEVIQLPLRKLDGEQNLIDRLNDYFSGEKI 486
F+ D+ C +C ++ + L + Q+L L+ + GE +
Sbjct: 141 -------FQGIYSDQKICKDCPHRYEREEAFMALNLGVTSC---QSLEISLDQFVRGEVL 190
Query: 487 E----YRCLTNKKINTASKVPGFSSFPRTLIINPIRIELINWQPS---KTSEQVVVPGVR 539
E Y C K+ K S P L+I+ +R +W+ K EQ+ P
Sbjct: 191 EGSNAYYCEKCKEKRITVKRTCIKSLPSVLVIHLMRFG-FDWESGRSIKYDEQIRFPW-- 247
Query: 540 DDALLDMSPFKATGI 554
+L+M P+ +G+
Sbjct: 248 ---MLNMEPYTVSGM 259
>Hs5730110 [O] KOG1867 Ubiquitin-specific protease
Length = 521
Score = 53.1 bits (126), Expect = 2e-06
Identities = 47/168 (27%), Positives = 72/168 (41%), Gaps = 28/168 (16%)
Query: 183 SQSCNDCGLTSNLWLCLHCGNVACGREQVGIEGYSHALKHYESTD----GHALAIKLGS- 237
S C+ C + W+CL C +V CGR G HA KHYE H + K
Sbjct: 26 SWCCSVCRSNKSPWVCLTCSSVHCGRYVNG-----HAKKHYEDAQVPLTNHKKSEKQDKV 80
Query: 238 -----LTADAADIYCYSCDEDVKFTHNLQLQDILKFWEVEVPAKSKEKTLVELQVEQSLK 292
+ + YCY CD+ V L L +V ++ E + + K
Sbjct: 81 QHTVCMDCSSYSTYCYRCDDFVVNDTKLGLVQ-----KVREHLQNLENSAFTADRHKKRK 135
Query: 293 WDFQMVDSQGKSLKHLQ-NGPEYGL---GLLNLGNSCYLNSVLQVLLN 336
++++ + K L+ NG + GL NLGN+C++N++LQ L N
Sbjct: 136 ----LLENSTLNSKLLKVNGSTTAICATGLRNLGNTCFMNAILQSLSN 179
>YJL197w [O] KOG1870 Ubiquitin C-terminal hydrolase
Length = 1254
Score = 52.0 bits (123), Expect = 3e-06
Identities = 47/149 (31%), Positives = 75/149 (49%), Gaps = 24/149 (16%)
Query: 317 GLLNLGNSCYLNSVLQVLLN-GGIRNWNL-DGLGSFPTD---------VVYPRTNLHCQL 365
GL+NLGN+CY+NS LQ L++ +R++ L DG + V ++L +L
Sbjct: 365 GLVNLGNTCYMNSALQCLVHIPQLRDYFLYDGYEDEINEENPLGYHGYVARAFSDLVQKL 424
Query: 366 IKIRNAMTLQQSRYPEGIKPTTFKKVIGGSHEEFSSGRQQDSLEFFSYLSDK----LDRE 421
+ R ++ + + +P P+ FK IG + FS QQDS EF ++L D L+R
Sbjct: 425 FQNRMSIMQRNAAFP----PSMFKSTIGHFNSMFSGYMQQDSQEFLAFLLDSLHEDLNRI 480
Query: 422 IFKNTTTNP-----NDLFRFNIQDKIKCD 445
I K T P +D+ +N+ K+ D
Sbjct: 481 IKKEYTEKPSLSPGDDVNDWNVVKKLADD 509
>7300491 [R] KOG0804 Cytoplasmic Zn-finger protein BRAP2 (BRCA1 associated
protein)
Length = 482
Score = 52.0 bits (123), Expect = 3e-06
Identities = 38/126 (30%), Positives = 60/126 (47%), Gaps = 23/126 (18%)
Query: 164 CPHIQTFDLSNLEKREGGISQSCNDCGLTSNLWLCLHCGNVACGREQVGIEGYSHALKHY 223
C H+QT L C +C T +LW+CL CG+V CGR Q G HA H+
Sbjct: 214 CRHVQTPGLVE--------DSVCMECEGTDSLWICLICGHVGCGRYQGG-----HAAAHF 260
Query: 224 ESTDGHALAIKLGSLTADAADIYCYSCDEDVKFTHNL-QLQDILKFWEVEVPAKSKEKTL 282
+T+ H A++LG+ + ++ Y+ D F H L Q + K + +E+ +
Sbjct: 261 RATN-HTFAMQLGT-----SSVWDYAGD---NFVHRLFQNKSDGKLVASQTEKDEREEKI 311
Query: 283 VELQVE 288
+Q+E
Sbjct: 312 DSMQME 317
>Hs22045513 [O] KOG1868 Ubiquitin C-terminal hydrolase
Length = 907
Score = 51.6 bits (122), Expect = 5e-06
Identities = 66/257 (25%), Positives = 110/257 (42%), Gaps = 50/257 (19%)
Query: 317 GLLNLGNSCYLNSVLQVLLNGGIRNWNLDGLGSFPTDVV-----YPRTNLHCQLIKIRNA 371
G NLGN+CY+N++LQ L + L SF D++ + + L+ + + +
Sbjct: 270 GFSNLGNTCYMNAILQSLFS----------LQSFANDLLKQGIPWKKIPLNALIRRFAHL 319
Query: 372 MTLQQSRYPEGIKPTTFKKV---IGGSHEEFSSGRQQDSLEFFSYLSDKLDREIFKNTTT 428
+ + E K KKV I + E FS Q D+ EF S D+L ++ K T
Sbjct: 320 LVKKDICNSE-TKKDLLKKVKNAISATAERFSGYMQNDAHEFLSQCLDQLKEDMEKLNKT 378
Query: 429 ----------NPNDL-------------FRFNIQDKIKCDNCNK-VKFMDQVSEV-IQLP 463
N D+ F +Q I C C + + +Q +++ I LP
Sbjct: 379 WKTEPVSGEENSPDISATRAYTCPVITNLEFEVQHSIICKACGEIIPKREQFNDLSIDLP 438
Query: 464 LRKLD-GEQNLIDRLNDYFSGEKIEYRCLTNKKINTASKV-PGFSSFPRTLIINPIR--I 519
RK +++ D L+ +F E++EY C K + V F+ PR LI++ R
Sbjct: 439 RRKKPLPPRSIQDSLDLFFRAEELEYSC--EKCGGKCALVRHKFNRLPRVLILHLKRYSF 496
Query: 520 ELINWQPSKTSEQVVVP 536
+ +K +QV++P
Sbjct: 497 NVALSLNNKIGQQVIIP 513
>7295436 [O] KOG4598 Putative ubiquitin-specific protease
Length = 1248
Score = 51.6 bits (122), Expect = 5e-06
Identities = 59/224 (26%), Positives = 91/224 (40%), Gaps = 28/224 (12%)
Query: 311 GPEYGLGLLNLGNSCYLNSVLQVL-----LNGGIRNWNLDGLGSFPTDVVYPRTNLHCQL 365
GP +GL+N +CYLNS+LQ L + W D N+ QL
Sbjct: 83 GPRGYVGLVNQAMTCYLNSLLQALFMTPEFRNALYRWEFDNDNE--------AKNIPYQL 134
Query: 366 IKIRNAMTLQQSRYPEGIKPTTFKKVIGGSHEEFSSGRQQDSLEFFSYLSDKLDREIFKN 425
K+ + LQ S ++ T + G E + +Q D E + D L+ + FKN
Sbjct: 135 QKL--FLNLQTSP-KAAVETTDLTRSFGWDSTE--AWQQHDIQELCRVMFDALEHK-FKN 188
Query: 426 T--TTNPNDLFRFNIQDKIKCDNCNKVKFMDQVSEVIQLPLRKLDGEQ---NLIDRLNDY 480
T ++L+ + D +KC CN K + I LP+R ++ + L +
Sbjct: 189 TKQANLISNLYEGKMNDYVKCLECNTEKTREDTFLDIPLPVRPFGSSSAYGSIEEALRAF 248
Query: 481 FSGEKI----EYRCLTNKKINTASKVPGFSSFPRTLIINPIRIE 520
E + +Y C KK A K F SFP L ++ R +
Sbjct: 249 VQPETLDGNNQYLCEKCKKKCDAHKGLHFKSFPYILTLHLKRFD 292
>HsM19923759 [O] KOG1868 Ubiquitin C-terminal hydrolase
Length = 605
Score = 50.8 bits (120), Expect = 8e-06
Identities = 40/123 (32%), Positives = 64/123 (51%), Gaps = 9/123 (7%)
Query: 317 GLLNLGNSCYLNSVLQVLLN-GGIRNWNLDGLGSFPTDVVYPRTNLHCQLIK--IRNAMT 373
GL NLGN+C++NS+LQ L N +R++ L L + D ++ +N H L++ + T
Sbjct: 268 GLRNLGNTCFMNSILQCLSNTRELRDYCLQRL--YMRD-LHHGSNAHTALVEEFAKLIQT 324
Query: 374 LQQSRYPEGIKPTTFKKVIGGSHEEFSSGRQQDSLEFFSYLSDKLDREIFKNT---TTNP 430
+ S + + P+ FK I F QQD+ EF +L D L E+ + T +NP
Sbjct: 325 IWTSSPNDVVSPSEFKTQIQRYAPRFVGYNQQDAQEFLRFLLDGLHNEVNRVTLRPKSNP 384
Query: 431 NDL 433
+L
Sbjct: 385 ENL 387
>Hs4827054 [O] KOG1868 Ubiquitin C-terminal hydrolase
Length = 1118
Score = 50.8 bits (120), Expect = 8e-06
Identities = 38/114 (33%), Positives = 57/114 (49%), Gaps = 11/114 (9%)
Query: 317 GLLNLGNSCYLNSVLQVLLNGG------IRNWNLDGLGSFPTDVVYPRTNLHCQLIKIRN 370
GL NLGN+CY+NS+LQ L N RN D + ++++ + + + I
Sbjct: 778 GLRNLGNTCYMNSILQCLCNAPHLADYFNRNCYQDDINR--SNLLGHKGEVAEEFGIIMK 835
Query: 371 AMTLQQSRYPEGIKPTTFKKVIGGSHEEFSSGRQQDSLEFFSYLSDKLDREIFK 424
A+ Q RY I P FK IG +++F+ QQDS E +L D L ++ K
Sbjct: 836 ALWTGQYRY---ISPKDFKITIGKINDQFAGYSQQDSQELLLFLMDGLHEDLNK 886
>Hs21361712 [O] KOG1868 Ubiquitin C-terminal hydrolase
Length = 605
Score = 50.8 bits (120), Expect = 8e-06
Identities = 40/123 (32%), Positives = 64/123 (51%), Gaps = 9/123 (7%)
Query: 317 GLLNLGNSCYLNSVLQVLLN-GGIRNWNLDGLGSFPTDVVYPRTNLHCQLIK--IRNAMT 373
GL NLGN+C++NS+LQ L N +R++ L L + D ++ +N H L++ + T
Sbjct: 268 GLRNLGNTCFMNSILQCLSNTRELRDYCLQRL--YMRD-LHHGSNAHTALVEEFAKLIQT 324
Query: 374 LQQSRYPEGIKPTTFKKVIGGSHEEFSSGRQQDSLEFFSYLSDKLDREIFKNT---TTNP 430
+ S + + P+ FK I F QQD+ EF +L D L E+ + T +NP
Sbjct: 325 IWTSSPNDVVSPSEFKTQIQRYAPRFVGYNQQDAQEFLRFLLDGLHNEVNRVTLRPKSNP 384
Query: 431 NDL 433
+L
Sbjct: 385 ENL 387
Database: KOG eukaryal database 04/03
Posted date: Apr 14, 2003 1:07 PM
Number of letters in database: 30,389,216
Number of sequences in database: 60,738
Lambda K H
0.317 0.134 0.402
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 47,996,958
Number of Sequences: 60738
Number of extensions: 2120423
Number of successful extensions: 6046
Number of sequences better than 1.0e-05: 42
Number of HSP's better than 0.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 36
Number of HSP's that attempted gapping in prelim test: 5885
Number of HSP's gapped (non-prelim): 84
length of query: 770
length of database: 30,389,216
effective HSP length: 114
effective length of query: 656
effective length of database: 23,465,084
effective search space: 15393095104
effective search space used: 15393095104
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)