ORF STATUS Function Best COG Functional category Pathways and functional systems
r_klactVI5010 good D KOG1938 Cell cycle control, cell division, chromosome partitioning Protein with predicted involvement in meiosis (GSG1)
Only best alignment is shown:
BLASTP 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= r_klactVI5010 1737522 1739462 647
(647 letters)
Database: KOG eukaryal database 04/03
60,738 sequences; 30,389,216 total letters
Searching..................................................done
Color Key for Alignment Scores: 
Score E
Sequences producing significant alignments: (bits) Value
YDR108w [D] KOG1938 Protein with predicted involvement in meiosi... 449 e-126
SPBC1604.19c [D] KOG1938 Protein with predicted involvement in m... 75 2e-13
SPBC1734.07c [D] KOG1938 Protein with predicted involvement in m... 59 2e-08
>YDR108w [D] KOG1938 Protein with predicted involvement in meiosis (GSG1)
Length = 698
Score = 449 bits (1155), Expect = e-126
Identities = 259/674 (38%), Positives = 389/674 (57%), Gaps = 69/674 (10%)
Query: 5 FSYEKYMNLIQYPEHWSNPIPHEISKKVIYNTLSPCICVQSNLELDNHLKDMYNIDSISM 64
FSYE YMNL+ + ++ +P EI+K++I N ++P I V S D H+++ Y +DS+ M
Sbjct: 3 FSYEHYMNLLFHLDNSKETVPPEIAKRIISNAIAPVITVTSTPLFDKHIQETYKVDSLYM 62
Query: 65 LFRYFGDYIQDRDQ----------------------IPSTTDLKDPGSVSSG-RHRSDSL 101
L R+FG + DRDQ IP +L+ P G R RS+SL
Sbjct: 63 LLRFFGGCVSDRDQANEAKVGQHEHEVCDASDSTDSIPKNKNLEVPNLSKKGSRSRSNSL 122
Query: 102 FQRQA--SECVRFTRSLEDLISI-DSEDHILQSTDIDSFLSQYLQNLEPIMNENGTPSKL 158
FQR + S+ +RFTR L DLI D+ D + ++ FL YL+ L + P L
Sbjct: 123 FQRDSTQSQYIRFTRPLGDLIETRDANDMLFNYHSLEVFLDNYLK-LVAANTDEMVPHNL 181
Query: 159 LKHSIYHRFF-ITLSSIN-LSRYHSFHHPVVALLPLDITKGQGYENAREILIHFKNLNNT 216
LK SIYH FF + +SS N LS Y +F+HP+++L+ LDI+ G+ YE+AR++L++FKNLN+
Sbjct: 182 LKKSIYHSFFSLAISSTNNLSPYETFNHPILSLIALDISNGEVYEDARDLLVNFKNLNHN 241
Query: 217 LENFPEFININDILPVFVLCYDENSREQWESVQALTKSLKKQLFVESVSISLFTP---HD 273
ENFP F+N N++LPVF+LCY+++S+E++E QAL K LKKQLFVES+ ++L+ +D
Sbjct: 242 TENFPIFMNTNEMLPVFLLCYNDDSQEEFEKCQALAKKLKKQLFVESILLALWKDSFIYD 301
Query: 274 NQKSTTLHSPITVSLHEQVFNMSHPTSINIPSRLLTHIYDTISFIVEEMMIPFMHRKLVF 333
LH P+ SL E +F + PT + L+ IYD + ++V ++MIPFM RK+ F
Sbjct: 302 ENSVIQLHQPVMSSLEEILFFLQAPTQTTLSLALINSIYDMLDYLVYDLMIPFMKRKVSF 361
Query: 334 WDETVLQPRKSIFQSNKFFRRFISPKSNHPI--AHKVNDPQDPAEGDIMFPASSPEFLLR 391
W+ET+LQPRKS+F KFF++F+ + +P+ H+ N ++G+ F +SS EFL+R
Sbjct: 362 WEETILQPRKSLFNGAKFFKKFM---NKNPVNGNHQHNSLTRDSQGNEYFASSSSEFLMR 418
Query: 392 KLADWSFMLSDFKKAYSIYDLLTKDFESYPQYLAPCLEYKTISLLMGAQNIITAKTIKTE 451
KLADWS MLSDFK AYS Y+ L D +++P+YLA C+E+ +SLLMGAQ+I+T K IK +
Sbjct: 419 KLADWSMMLSDFKTAYSTYESLMDDLDAFPKYLASCIEWCAVSLLMGAQSIVTVKMIKND 478
Query: 452 VDPLMTRAIEQYK--------KQDEKHSLRV--------IHCIXXXXXXXXXXXXXXXXX 495
++PL+ RA+ Y+ K E +SL V C+
Sbjct: 479 INPLIERALATYENCSRIQRGKGKESNSLDVTEPVRSYETRCMILASELFLSLSNTWTST 538
Query: 496 PLAVNYLTYIQKSHLLGPYATVIILERIAYAYEICIDLRVNDHFLPKPDEENKADESEAA 555
P A+ YL I LGP + +++ ER++ Y + +D R+ H + ++ K E
Sbjct: 539 PYAIQYLETILDECKLGPCSQIMVWERLSDCYNLRVDPRIK-HRVGAMKKDAKDTE---- 593
Query: 556 ENSKKGENGLEVDDMHEWRNENKLIQNNLRSEGLTRFRKYSLYQLVAAKKWVELHKRNQA 615
+GE+ D + ++ SEGLTR RK + ++L+AAKKW E + Q
Sbjct: 594 --DLRGEHKYSTDHFTD---------EDILSEGLTRRRKAAFFRLIAAKKWAEQKQWRQV 642
Query: 616 KWCIYHAAPAYEKL 629
WC+ Y ++
Sbjct: 643 SWCLKDIESTYSEI 656
>SPBC1604.19c [D] KOG1938 Protein with predicted involvement in meiosis (GSG1)
Length = 658
Score = 75.5 bits (184), Expect = 2e-13
Identities = 113/476 (23%), Positives = 191/476 (39%), Gaps = 82/476 (17%)
Query: 30 KKVIYNTLSPCICVQSNLELDNHLKDMYNIDSISMLFRYFGDYIQDRDQIPSTTDLKDPG 89
+++I +T P I + ++ + +N +K D + R FGD I S +
Sbjct: 41 RQLISDTYCPHIFIMASDDTENFMKRK-GFDDFASFIRPFGDRIFQSSTNNSAISKETLD 99
Query: 90 S-VSSGRHRSDSLFQRQASECVRFTR-----SLEDLISIDSEDHILQSTDIDSF--LSQY 141
S + H S +A + R + + E+ + + DIDSF LSQ
Sbjct: 100 SRIFDNDHDSIRFVPMEAVQVPRQWKRNKAWNTENGLENCANSRFAPGGDIDSFRVLSQK 159
Query: 142 LQNLEPIMNENGTPSKLLKHSIYHRFFITLSSINLSRYHSFHHPVVALLPLDITKGQGYE 201
L N P + I + LS ++ + +F HPV L+ +
Sbjct: 160 LIEEWVQSGSNNYPENGFLNPILDYLKLLLSGNPVAEHETFSHPVGCLI---VITSHNTN 216
Query: 202 NAREILIHFKNLNNTLENFPEFININDILPVFVLCYDENSREQWESVQALTKSLKKQLFV 261
++ FK +NN FP FI+ +IL ++ +DE++ + S Q + + +++ L
Sbjct: 217 PMATVMRLFKEINNA--PFPNFIS-KEILHYYLFIHDEDNNDLSNSKQ-IFQQMRRSLGA 272
Query: 262 ESVSISLFT------------------------PHDNQKSTTLHS------PITV----- 286
S I L + P D+ +S + S PIT
Sbjct: 273 NSHFIRLRSNYISAKPLDTDRYDTSSIQSLKNAPRDSMESESFCSSSDDAKPITFVTKNL 332
Query: 287 ----------SLHEQVFNMSH--PTSINIPSRLLTHIYDTISFIVEEMMIPFMHRKLVFW 334
SL Q + P +P + + + ++ + + PFM R + W
Sbjct: 333 RKFPIPEWRSSLEVQAESEQSCLPLYPLLPVEEVEGMKKFVQTMLYDSIYPFMQRCVRAW 392
Query: 335 DETVLQPR------KSIFQSNKFFRRFISPKSNHPIAHKVNDPQDPAEGDIMFPASSPEF 388
+E L P+ + +F S K++ R NH + N DP +++ + E
Sbjct: 393 EED-LTPQYGNLTTRLLFASKKYWSR------NHSSHSQGN--YDPLS--LIYSSEKQES 441
Query: 389 LLRKLADWSFMLSDFKKAYSIYDLLTKDF--ESYPQYLAPCLEYKTISLLMGAQNI 442
+ RK+AD+SFML D+K+AY IYD + F + YLA C E + I LLM +NI
Sbjct: 442 IKRKMADFSFMLRDYKRAYEIYDEIRNTFSQDKAWNYLASCEEIQIICLLMQNRNI 497
>SPBC1734.07c [D] KOG1938 Protein with predicted involvement in meiosis (GSG1)
Length = 618
Score = 58.9 bits (141), Expect = 2e-08
Identities = 67/261 (25%), Positives = 119/261 (44%), Gaps = 32/261 (12%)
Query: 171 LSSINLSRYHSFHHPVVALLPLDITKGQGYENAREILIHFKNLNNTLENFPEFININDIL 230
L+ I ++ + +F HPV L+ + +E+ R ++ L+ P F+ NDI
Sbjct: 185 LTGIPITPFETFSHPVAHLVVVTSHNPSPFESLRSLINSIPYLS-----LPAFV-FNDIN 238
Query: 231 PVFVLCYDENSREQWESVQALTKSLKKQLFVESVSISLFTPHDNQKST-----TLHSPIT 285
+FV +DE+ + E A+ ++K Q F + F +QK+T T+ P +
Sbjct: 239 YLFVYVHDEDQHDL-ELSMAIFDTMK-QTFGDC---GYFLRLHSQKATLDYEHTVPFPTS 293
Query: 286 --VSLHEQVFNMSHP-TSINI----PSRLLTHIYDTISFIVEEMMIPFMHRKLVFWDETV 338
+S E++ +S+ T I + + L + I+F ++ ++ + + WD+
Sbjct: 294 SWLSAEERLHLLSNTDTEIRLLFESDNESLRRLSSHIAF---NGIVSYLDKCVRAWDDQY 350
Query: 339 LQPRKSIFQSNKFFRRFISPKSNHPIAHKVNDPQDPAEGDIMFPASSPEFLLRKLADWSF 398
PR+ I F R SN N P+ + SPE LRKLAD+SF
Sbjct: 351 ASPRRGITGKLLFASRKYLSSSNA----STNSNYFPSSN--AYRPFSPEAYLRKLADYSF 404
Query: 399 MLSDFKKAYSIYDLLTKDFES 419
ML D+ A IY++ ++ +E+
Sbjct: 405 MLRDYSHANQIYEIASRQYEN 425
Database: KOG eukaryal database 04/03
Posted date: Apr 14, 2003 1:07 PM
Number of letters in database: 30,389,216
Number of sequences in database: 60,738
Lambda K H
0.320 0.135 0.400
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 39,165,088
Number of Sequences: 60738
Number of extensions: 1717152
Number of successful extensions: 5231
Number of sequences better than 1.0e-05: 3
Number of HSP's better than 0.0 without gapping: 1
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 5221
Number of HSP's gapped (non-prelim): 3
length of query: 647
length of database: 30,389,216
effective HSP length: 113
effective length of query: 534
effective length of database: 23,525,822
effective search space: 12562788948
effective search space used: 12562788948
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)