ORF STATUS Function Best COG Functional category Pathways and functional systems
r_klactVI5105 good O KOG3566 Posttranslational modification, protein turnover, chaperones Glycosylphosphatidylinositol anchor attachment protein GAA1
Only best alignment is shown:
BLASTP 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= r_klactVI5105 1771250 1772983 578
(578 letters)
Database: KOG eukaryal database 04/03
60,738 sequences; 30,389,216 total letters
Searching..................................................done
Color Key for Alignment Scores: 
Score E
Sequences producing significant alignments: (bits) Value
YLR088w [O] KOG3566 Glycosylphosphatidylinositol anchor attachme... 663 0.0
SPAC1002.11 [O] KOG3566 Glycosylphosphatidylinositol anchor atta... 212 1e-54
7290645 [O] KOG3566 Glycosylphosphatidylinositol anchor attachme... 148 3e-35
Hs4504079 [O] KOG3566 Glycosylphosphatidylinositol anchor attach... 134 5e-31
At5g19130 [O] KOG3566 Glycosylphosphatidylinositol anchor attach... 115 1e-25
CE28390_2 [O] KOG3566 Glycosylphosphatidylinositol anchor attach... 69 1e-11
>YLR088w [O] KOG3566 Glycosylphosphatidylinositol anchor attachment protein
GAA1
Length = 614
Score = 663 bits (1711), Expect = 0.0
Identities = 330/615 (53%), Positives = 428/615 (68%), Gaps = 40/615 (6%)
Query: 1 MALVEKLHRRIISIGLIPKFISKLSQLSLLCCVIGLGWLVFMLPSDGQFRRTYISENALL 60
MAL+EKLHRRI+ +GL+P+ I+ L +S+LC + G + +LP DGQ+RRTYISENAL+
Sbjct: 1 MALLEKLHRRIVDMGLVPRIIALLPVISMLCALFGF-ISIAILPMDGQYRRTYISENALM 59
Query: 61 PSQAYSYFRESEWNILRGYRTQLDLFQYVSTTHDSNAEVSKWLQEFGVKTAIYDDEQYGE 120
PSQAYSYFRESEWNILRGYR+Q+ + T+ + N + WLQEFG KTAIY++EQYGE
Sbjct: 60 PSQAYSYFRESEWNILRGYRSQIKEMVNM-TSMERNNLMGSWLQEFGTKTAIYENEQYGE 118
Query: 121 TLYGIFHAPRGDGTEAMVIAAPWYNENREYNTGGAALAISLVRFFSRWPVWSKNIIIVLS 180
TLYG+ HAPRGDGTEAMV+A PW+N + E+N GGAAL +SL RFFSRWPVWSKNII+V S
Sbjct: 119 TLYGVMHAPRGDGTEAMVLAVPWFNSDDEFNIGGAALGVSLARFFSRWPVWSKNIIVVFS 178
Query: 181 EDPKASLRSWVTAYHTSLDLTGGSIESAIVLDYPGTSDRFDYMEIHYDGLNGETPNLDLV 240
E+P+A+LRSWV AYHTSLDLTGGSIE+A+VLDY T D F+Y+EI YDGLNGE PNLDLV
Sbjct: 179 ENPRAALRSWVEAYHTSLDLTGGSIEAAVVLDYSSTEDFFEYVEISYDGLNGELPNLDLV 238
Query: 241 NVAVHIAEHEGIKVSLHGLPFSELDRNDYNSRLKTMLLGIKDSVLSGIKNCYGNEAFSGW 300
N+A+ I EHEG+KVSLHGLP +L N++ SRLK + LGI+D LSG+K +GNEAFSGW
Sbjct: 239 NIAISITEHEGMKVSLHGLPSDQLTNNNFWSRLKILCLGIRDWALSGVKKPHGNEAFSGW 298
Query: 301 RIQSLTLKAKGIDGPHDITTFGRVPEALSRSVNNLLEKFHQSFFFYLLLAPRYFISIGTY 360
RIQS+TLKA G G HDITTFGR+PEA+ RS+NNLLEKFHQSFFFYLLLAPR F+SI +Y
Sbjct: 299 RIQSVTLKAHGNSG-HDITTFGRIPEAMFRSINNLLEKFHQSFFFYLLLAPRQFVSISSY 357
Query: 361 LXXXXXXXXXXXXXXLNQILNNKYGELPLLSIYNIWSILTFCISLVFAFATSQLFVYFPL 420
L LN +NN Y + L S YN+ ++L + +SLV +F SQ F+ P
Sbjct: 358 LPSAVALSIAFAISSLNAFINNAYANISLFSEYNLVALLVWFVSLVISFVVSQAFLLIPS 417
Query: 421 PRVLLGLSGIFSVLPLLSRTRLRIQEPFSYRFKAFAYIYMAIVLTSLLVLNFSLAIVMGL 480
+L+ +S LPL+ ++ I EP SYR K A++Y ++V TSLL++NF++A+++G
Sbjct: 418 SGLLMTISMASCFLPLILSRKIHISEPLSYRLKNVAFLYFSLVSTSLLMINFAMALLIGT 477
Query: 481 LAFPMTRTTTIIESN-------------------------------------LRLSIKNL 503
LAFPMT TI+ES+ + +KNL
Sbjct: 478 LAFPMTFVKTIVESSSEHEVTTQSSNPIKTEPKDEIELVENHMDTTPATPQQQKQKLKNL 537
Query: 504 VLLIISNPFIATWAVVNFVEPRLSGFKVFYALIEASQQLGCWTWYIICLGWYPSWLLVTY 563
VLLI++NPFI+ F + GF + L+ A L CW+W+++C+GW P WLL+
Sbjct: 538 VLLILTNPFISITLFGLFFDDEFHGFDIINKLVSAWLDLKCWSWFVLCIGWLPCWLLILA 597
Query: 564 ASIDAIEVQTPIKKE 578
+S ++ V K++
Sbjct: 598 SSFESKSVVVRSKEK 612
>SPAC1002.11 [O] KOG3566 Glycosylphosphatidylinositol anchor attachment protein
GAA1
Length = 581
Score = 212 bits (540), Expect = 1e-54
Identities = 157/523 (30%), Positives = 250/523 (47%), Gaps = 42/523 (8%)
Query: 12 ISIGLIPKFISKLSQLSLLCCVIGLGWLVFMLPSDGQFRRTYISENALLPSQAYSYFRES 71
+ I + P L L L +IGL W +F+LP + R ++SE+ALLP Q +YF
Sbjct: 7 VQIRVFPFLQRHLFFLQLSLTLIGLSW-IFILPRNEIIDRLHVSESALLPGQVNTYFENR 65
Query: 72 EWNILRGYRTQLDLFQYVSTTHDSNAEVSKWLQEF---GVKTA-------IYDDEQYGET 121
+ T + + ++ + +N Q F G+ T I E G
Sbjct: 66 YSKTVSSSLTAANTWSHLDASVGTNTMYDDLEQIFTAMGLPTQKQNYSINIPGSEFNGSN 125
Query: 122 LYGIFHAPRGDGTEAMVIAAPWYNENREYNTGGAALAISLVRFFSRWPVWSKNIIIVLSE 181
APRGD TE++++ PW + +YN G ALAISL+++F W +WSK+II+V+ +
Sbjct: 126 FITTLRAPRGDATESLLLCVPWKDHIGQYNEAGVALAISLLKYFQGWSLWSKDIILVIFD 185
Query: 182 DPKASLRSWVTAY---------HTSLDLTGGSIESAIVLDYPGTSDRFDYMEIHYDGLNG 232
DP S++T+Y +T L + GSI++ + L+ T + D +E+ Y NG
Sbjct: 186 DPVYGPSSFLTSYFDQTTPYISYTPLKIRSGSIQAGLSLELVTTENNSDVLEVLYQATNG 245
Query: 233 ETPNLDLVNVAVHI-AEHEGIKVSLHGLPFSELDRNDYNSRLKTMLLGIKDSVLSGIKNC 291
+ PNLDL N I +H + L G F + Y SRLK++ +G+ +S + +
Sbjct: 246 QLPNLDLFNTISRIFMQHFNYPLRLQGYDFHANSGSSYTSRLKSLWMGMLTQAVSNVTSA 305
Query: 292 YGNEAFSGWRIQSLTLKAKGIDG-PHDITTFGRVPEALSRSVNNLLEKFHQSFFFYLLLA 350
+ F +RI LTL+ K D D+ FG+ E+ RS+NNLLE HQSFFFY +L
Sbjct: 306 HA--LFPQYRIDMLTLRMKVKDPFSFDMFRFGQAIESTFRSLNNLLEHLHQSFFFYFILD 363
Query: 351 PRYFISIGTYLXXXXXXXXXXXXXXLNQILNNKYGELPLLSIYNIWSILTFCISLVFAFA 410
+FISIG Y+ +N++ ++ L ++ W FC +
Sbjct: 364 HLHFISIGNYMPSILILAASFMLGAYRHWINHE-KKIDLWRPFSFWLFSIFCTIAAYYLV 422
Query: 411 TSQ----LFVYFPLPRVLLGLSGIFSVLPLLSRTRLRIQEPFSYRFKAFAYIYMAIVLTS 466
+S +F++ L +G+ IFS L + SY + + +++++V T
Sbjct: 423 SSSTKITVFIFLYLMLTFIGI--IFSTFMTSEDAELVL----SYDLMSKS-LFISVVST- 474
Query: 467 LLVLNFSLAIVMGLLAFPMTRTTTIIESNLRLSIKNLVLLIIS 509
LNFSL+ V+ +L P+ + N RLS+ VL S
Sbjct: 475 ---LNFSLSFVVAILLVPLQFIS--FRFNRRLSLLFAVLTYFS 512
>7290645 [O] KOG3566 Glycosylphosphatidylinositol anchor attachment protein
GAA1
Length = 674
Score = 148 bits (373), Expect = 3e-35
Identities = 164/625 (26%), Positives = 267/625 (42%), Gaps = 114/625 (18%)
Query: 33 VIGLGWLVFMLPSDGQFRRTYISENALLPSQAYSYFR--ESEWNILRGYRTQLDLFQYVS 90
V G+ W F L TY+SENAL P Y R + I Q + ++S
Sbjct: 32 VAGVAWF-FCLALPEFNHGTYLSENALSPGLVYPEIRIDANRLAIQLLEELQRERKDHLS 90
Query: 91 TTHDSNAEVSKWLQEFGVKTAIYD----------DEQYGETLYGIFHAPRGDGTEAMVIA 140
TT +A ++ + EFG++T ++ E +G+ +YGI APR TE +V A
Sbjct: 91 TT--PHAWIAAKMNEFGLETHTHNYTLRYPFGGGKEYHGKNIYGILRAPRIASTEGIVFA 148
Query: 141 APWYNENREYNTGGAA--LAISLVRFFSRWPVWSKNIIIVLSEDPKASLRSWVTAYHTS- 197
AP+ + + A+ L ++ F R W+K++I +++E + +++W+ AYH
Sbjct: 149 APYRAASSVHTDISASVPLLLAFADFARRKNYWAKDLIFLITEQEQLGMQAWLEAYHDGD 208
Query: 198 --LDLT------------GGSIESAIVLDYPGTSDRFDYMEIHYDGLNGETPNLDLVNVA 243
LDL+ GS+++A+ ++ D++++ +GLNG+ PNLD+ N+
Sbjct: 209 RELDLSKAYLRPGNLPARAGSLQAALNIEVQDLE--IDHVDVRIEGLNGKLPNLDMFNLV 266
Query: 244 VHIAEHEGIKVSLHGLPFSEL--DRNDYNSRLKTMLLGIKDSVLSGIKNCYGNEA-FSGW 300
I EGI P + ++ + + ML + S SG+ GN F +
Sbjct: 267 QRIMAREGIASGYKQAPRKKRRHSQSHFEQNFRQMLTMLA-SQSSGVPT--GNHGLFHRY 323
Query: 301 RIQSLTLKA---------KGIDGPHDITTFGRVPEALSRSVNNLLEKFHQSFFFYLLLAP 351
RI +LT+ A KG G + + E ++RS+NNLLE+FHQSFFFY++++
Sbjct: 324 RIDALTIAANRRATHATLKGSPGSAAVPLLKAI-EGIARSLNNLLERFHQSFFFYVIVSN 382
Query: 352 RYFISIGTYLXXXXXXXX-----------------------------XXXXXXLNQILNN 382
+ISIG Y+ L + L
Sbjct: 383 DRYISIGDYMPALVALVACAFLKAYLTWSTLPATNAELEKAAGWLREHEQEAELEENLEP 442
Query: 383 KYGELPLLSIYNIWSILTFCIS-LVFAFATSQLFVYFPL------PRVLLGLSGIFSVLP 435
ELP S+ I+ T I L Q F+ P+ VL LS I VLP
Sbjct: 443 DKFELPYGSVL-IYLTATLLIGFLCNVLPLQQYFLEIPMGAAPLTTSVLSFLSLIGFVLP 501
Query: 436 LLSRTRLRIQEP--FSYRFKAFAYIYMAIVLTSLLVLNFSLAIVMGLLAFPMTRTTTIIE 493
+ + P AF IY L + +LNF+L + +L P+ E
Sbjct: 502 FVV-----VLPPGGLELLHVAFLLIY-GCALIVIGLLNFALGLFAAVLTVPLVIALETKE 555
Query: 494 SNLRLSIKNLVLL--IISNPFIATWAVV---NFVE-PRLSGFKVF------------YAL 535
N R +++N + L ++ NP + + +V F + P L K+ Y L
Sbjct: 556 ENSRSTLRNTIRLATLVMNPMMVVYVIVLAMTFYQFPELPVQKIMLRAATAAMDASAYGL 615
Query: 536 IEASQQLGCWTWYIICLGWYPSWLL 560
I+ S G W +++IC + P W++
Sbjct: 616 ID-SVIYGNWLYFVICTIFLPLWII 639
>Hs4504079 [O] KOG3566 Glycosylphosphatidylinositol anchor attachment protein
GAA1
Length = 621
Score = 134 bits (336), Expect = 5e-31
Identities = 156/615 (25%), Positives = 262/615 (42%), Gaps = 106/615 (17%)
Query: 27 LSLLCCVIGLGW-LVFMLPSDGQFRRTYISENALLPSQAYSYFRESEWNILRGYRTQLDL 85
L +L V G+ W L + P Q RTY+SENA+ + F G R +
Sbjct: 24 LCVLSYVAGIAWFLALVFPPLTQ--RTYMSENAMGSTMVEEQFAG-------GDRARAFA 74
Query: 86 FQYVSTTHDSNAEVSKWL-------------QEFGVKTAIYDD--EQY---GETLYGIFH 127
+ + S A WL Q F K D+ E+Y G +YGI
Sbjct: 75 RDFAAHRKKSGALPVAWLERTMRSVGLEVYTQSFSRKLPFPDETHERYMVSGTNVYGILR 134
Query: 128 APRGDGTEAMVIAAPWYNENREYNTGGAALAISLVRFFSRWPVWSKNIIIVLSEDPKASL 187
APR TE++V+ P +++ N+ L ++L F W+K+I+ +++E
Sbjct: 135 APRAASTESLVLTVPCGSDST--NSQAVGLLLALAAHFRGQIYWAKDIVFLVTEHDLLGT 192
Query: 188 RSWVTAYHTSLDLTG----------GSIESAIVLDYPGTSDRFDYMEIHYDGLNGETPNL 237
+W+ AYH +++TG G+I++A+ L+ +SD +++ +GLNG+ PNL
Sbjct: 193 EAWLEAYH-DVNVTGMQSSPLQGRAGAIQAAVALEL--SSDVVTSLDVAVEGLNGQLPNL 249
Query: 238 DLVNVAVHIAEHEGIKVSLHGLPFSELDRNDYNSRLKTMLLGIKDSVLSGIKNCYGNE-- 295
DL+N+ + G+ +L G +L D+ S L L G++ +L ++ G
Sbjct: 250 DLLNLFQTFCQKGGLLCTLQG----KLQPEDWTS-LDGPLQGLQTLLLMVLRQASGRPHG 304
Query: 296 ---AFSGWRIQSLTLKAKGIDG----PHDITTFGRVPEALSRSVNNLLEKFHQSFFFYLL 348
F +R+++LTL+ GI+ +D+ G+ E + R +N+LLE+ HQSFF YLL
Sbjct: 305 SHGLFLRYRVEALTLR--GINSFRQYKYDLVAVGKALEGMFRKLNHLLERLHQSFFLYLL 362
Query: 349 LAPRYFISIGTYLXXXXXXXXXXXXXXLN---QILNNKYG----------ELPL------ 389
F+SIG Y+ L Q+ G +PL
Sbjct: 363 PGLSRFVSIGLYMPAVGFLLLVLGLKALELWMQLHEAGMGLEEPGGAPGPSVPLPPSQGV 422
Query: 390 --------LSIYNIWSILTFCISLVFAFATSQLFVYFPLPRVLLGLSGIFS---VLPLLS 438
L I + + + ++ +Q F V+L L I++ LP +
Sbjct: 423 GLASLVAPLLISQAMGLALYVLPVLGQHVATQHFPVAEAEAVVLTLLAIYAAGLALPHNT 482
Query: 439 RTRLRIQEPFS--YRFKAFAYIYMAIVLTSLLVLNFSLAIVMGLLAFPMTRTTTIIESNL 496
+ Q P K A IY+A+ L + + NFSL LLA M T + + +
Sbjct: 483 HRVVSTQAPDRGWMALKLVALIYLALQLGCIALTNFSLGF---LLATTMVPTAALAKPHG 539
Query: 497 RLSIKNLVLLIISNP------FIATWAVVNFVEPRLS-GFKVFYALIEAS----QQLGCW 545
++ LL++++P + W + L+ G+++F A + G
Sbjct: 540 PRTL-YAALLVLTSPAATLLGSLFLWRELQEAPLSLAEGWQLFLAALAQGVLEHHTYGAL 598
Query: 546 TWYIICLGWYPSWLL 560
+ ++ LG YP WLL
Sbjct: 599 LFPLLSLGLYPCWLL 613
>At5g19130 [O] KOG3566 Glycosylphosphatidylinositol anchor attachment protein
GAA1
Length = 696
Score = 115 bits (289), Expect = 1e-25
Identities = 111/400 (27%), Positives = 172/400 (42%), Gaps = 93/400 (23%)
Query: 50 RRTYISENALLPSQAYSYFRESEWNILRGYRTQLDLFQYVSTTHDSNAE--VSKWLQEFG 107
+ TYISENAL+P A S S ++ G + D+ + H+ + + K++ + G
Sbjct: 60 KNTYISENALMPGSARSML--SNRDVSDGSKLVKDIKNF-RLNHEGQVQKLIGKYMSDMG 116
Query: 108 VKTAI---------------------------YDDEQYGETLYGIFHAPRGDGTEAMVIA 140
+ + YG + GI APRGDG E++V+
Sbjct: 117 AEVSYQKFHPEGNQFHPLHFFSGPDSYTLLENVSCASYGVNVAGIIRAPRGDGKESIVLV 176
Query: 141 APW-YNENREYNTGGAALAISLVRFFSRWPVWSKNIIIVLSEDPKASLR---SWVTAYHT 196
P+ + +Y + SL SR SK+II ++++ R +W+T YH+
Sbjct: 177 TPYDFINGGDYEDLSLGIVSSLFSLLSRVTWLSKDIIWLVADSRYGDYRPVAAWLTEYHS 236
Query: 197 S----LDL-------------TGGSIESAIVLDYPGTSDRF-DYMEIHYDGLNGETPNLD 238
DL G++ +A+VL G S++F D + I+ + NG+ PNLD
Sbjct: 237 PSFKVSDLLKCDEQNTADNFRRAGTMAAALVLKVDGRSEKFEDTLSIYAEASNGQMPNLD 296
Query: 239 LVNVAVHIAEH-EGIKVSLHGLP----------FSEL-------------DRN------D 268
L+NV ++A H +G V + + F E+ D N D
Sbjct: 297 LINVVNYLAVHRQGFYVKVEKVVSLLSSSWLKIFGEIFEAVGKLAHMLNPDWNFGIPAAD 356
Query: 269 YNSRLKTMLLGIKDSVLSGIKNCYGNEAFSGWRIQSLTLKAKGIDGP------HDITTFG 322
Y T+ + L +G AF +++ ++TLK P HD G
Sbjct: 357 YLEGSATLASSLYSQALGIPTGPHG--AFRDYQVDAITLKVSPRFPPDSKTRQHDFFLRG 414
Query: 323 -RVPEALSRSVNNLLEKFHQSFFFYLLLAPRYFISIGTYL 361
R+ E RSVNNLLEKFHQSFF Y+L +P FIS+G Y+
Sbjct: 415 ARLLEGTIRSVNNLLEKFHQSFFLYMLTSPSKFISVGVYM 454
>CE28390_2 [O] KOG3566 Glycosylphosphatidylinositol anchor attachment protein
GAA1
Length = 544
Score = 69.3 bits (168), Expect = 1e-11
Identities = 102/507 (20%), Positives = 190/507 (37%), Gaps = 74/507 (14%)
Query: 119 GETLYGIFHAPRGDGTEAMVIAAPWYNENREYNTGGAALAISLVRFFSRWPVWSKNIIIV 178
GE +YG PR DG EA +I + LA V + W+++I+IV
Sbjct: 10 GENVYGFIRGPRNDGAEAQMIVVQLGRSEKSRRMMSRMLA--FVDYAKDQVYWARDIVIV 67
Query: 179 LSED-------PKASL-----------------RSWVTAYHTSLDLTGGSIESAIVLDYP 214
+ KA+ + +T + G++ +V D
Sbjct: 68 FVDGGEKNDSIEKAAFALDAFLLKYQKIEALNSKKSITVEADEIQAQTGALIGGVVYDLS 127
Query: 215 GTSDRFDY-MEIHYDGLNGETPNLDLVNVAVHIAE---HEGIKV----SLHGLPFSELDR 266
G + + + + I +GLNG+ NLD+ N IA+ H + + H P+ E
Sbjct: 128 GMAVKGQHIVNIQTNGLNGQQVNLDVFNGITKIADSKHHSRVAIFGTLHRHSNPYME--- 184
Query: 267 NDYNSRLKTMLLGIKDSVLS--GIKNCYGNEAFSGWRIQSLTLKAKGIDGPHDITTFGRV 324
Y+ + M + +S GI + G + +Q LT+ G+ + G+
Sbjct: 185 --YSPFIVPMRALYTQAFISIEGIHSVLGK-----YGVQGLTV---GLSHDYSEKQTGQF 234
Query: 325 PEALSRSVNNLLEKFHQSFFFYLLLAPRYFISIGTYLXXXXXXXXXXXXXXLNQILNNKY 384
E +SR +NN+LE+ HQS+F Y+L +F SI Y+ + +
Sbjct: 235 IEEVSRMLNNVLERLHQSYFMYVLADDLHFSSIAMYIIPLTILVSPLVISAYFEWTKIQE 294
Query: 385 GELPLLSIYNIWSILTFCISLVFAFAT-SQLFVYFPLPRVLLGLSG-------------- 429
+ P++ + + I+ + F T FV + +G+ G
Sbjct: 295 FQFPVVHLAFHVLGFFYYIATTYVFQTIGTTFVLQWMQWPFVGIDGCDGQFTPSWSLINS 354
Query: 430 --IFSVLPLLSRTRLRIQEPFSYRFKAFAYIYMAIVLTSLLVLNFSLAIVMGLLAFP--- 484
IF ++PL L+ + + ++VL + + NF LAI+ P
Sbjct: 355 FLIFFMIPLGPYVFLKEPVRCVPSMRIVCLLETSLVLYGICLTNFGLAILCTAFVVPIVF 414
Query: 485 MTRTTTIIESNL-----RLSIKNLVLLIISNPFIATWAVVNFVEPRLSGFKVFYALIEAS 539
+ T +I S++ +S+ V + I F + ++ + + I
Sbjct: 415 LMTTRSIFRSSVLAILNPISVLAFVAINIPGMFGQLFPTISQDSWLAAAQSIALTAIRED 474
Query: 540 QQLGCWTWYIICLGWYPSWLLVTYASI 566
+ ++++C YP W ++ S+
Sbjct: 475 VEFKVNHFFLLCCFGYPIWNMLFACSM 501
Database: KOG eukaryal database 04/03
Posted date: Apr 14, 2003 1:07 PM
Number of letters in database: 30,389,216
Number of sequences in database: 60,738
Lambda K H
0.325 0.141 0.430
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 32,614,363
Number of Sequences: 60738
Number of extensions: 1343679
Number of successful extensions: 3911
Number of sequences better than 1.0e-05: 6
Number of HSP's better than 0.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 3881
Number of HSP's gapped (non-prelim): 13
length of query: 578
length of database: 30,389,216
effective HSP length: 112
effective length of query: 466
effective length of database: 23,586,560
effective search space: 10991336960
effective search space used: 10991336960
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)