ORF STATUS Function Best COG Functional category Pathways and functional systems
r_klactVI5230 good R KOG2997 General function prediction only F-box protein FBX9
Only best alignment is shown:
BLASTP 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= r_klactVI5230 1814511 1813465 -349
(349 letters)
Database: KOG eukaryal database 04/03
60,738 sequences; 30,389,216 total letters
Searching..................................................done
Color Key for Alignment Scores: 
Score E
Sequences producing significant alignments: (bits) Value
YLR097c [R] KOG2997 F-box protein FBX9 333 2e-91
SPCC1827.08c [R] KOG2997 F-box protein FBX9 103 4e-22
Hs6912546 [R] KOG2997 F-box protein FBX9 95 2e-19
Hs15812201 [R] KOG2997 F-box protein FBX9 95 2e-19
Hs15812203 [R] KOG2997 F-box protein FBX9 86 6e-17
7299643 [R] KOG2997 F-box protein FBX9 69 1e-11
At1g21760 [R] KOG2997 F-box protein FBX9 53 8e-07
>YLR097c [R] KOG2997 F-box protein FBX9
Length = 344
Score = 333 bits (854), Expect = 2e-91
Identities = 171/344 (49%), Positives = 234/344 (67%), Gaps = 15/344 (4%)
Query: 6 EAIALWELGYSKETAGAMTDAIKYYRKALRMNPDVEKLYRKKMHDEWRLNEEMKKLKLNS 65
EAIA+WE G KE G+M+DAI +YR AL+++ +VE LYRKK+ DEW L++++ L + +
Sbjct: 13 EAIAIWEKGVLKEKDGSMSDAINFYRSALKIHDNVESLYRKKILDEWMLHKKLSGLSMTT 72
Query: 66 NVNIVDGSSETDPDGRKEETEGLSQTEDLVELPCWILDMLPDDILSMIIDMVVLSSADSW 125
+ D +ET D LS E+ PCWIL++LPDDIL II V+L S +SW
Sbjct: 73 DAP--DEQNETGKDD-------LSVEENAELQPCWILEILPDDILLRIIKKVILMSGESW 123
Query: 126 MNLSLTCKKFNLLCFHDSSPYRTFAEYIYKKQVYNENEMRLNGISDIQALAETVW-GQNY 184
+NLS+TC F+ LCFHDS P++TFA+YIY KQ+Y++ M LNGI+DI + +W G +Y
Sbjct: 124 VNLSMTCSTFSKLCFHDSVPFKTFAKYIYSKQIYDKMAMDLNGITDINTFEKEIWRGDDY 183
Query: 185 RKMLKERPYIKFHGIYISVVNYLRHGSIPEGSSSLLNPIHMITYYRYFRFYPDGRCIRLL 244
R ML+ERPYIKF G+YISVVNY+R+GS E S SLL P+HMITYYRYFRFY +G+C+RLL
Sbjct: 184 R-MLRERPYIKFEGVYISVVNYVRYGSNAESSLSLLKPVHMITYYRYFRFYENGQCLRLL 242
Query: 245 TTDEPNIVVPGFSLERCSERKDSDICSWSLSLDDGLDQLTIKRNRRKDGLEFNEILKISN 304
+TDEP+ VV FS E ++ + S +C WSL D L I R+ K F E +I N
Sbjct: 243 STDEPSAVVKHFSKE--NKPRHSHMCYWSLGFDYDFGHLKITRSDEK--YTFIEEFQIKN 298
Query: 305 RGHKKFSKLKWIASSATRQDGTTMQFSLSKEKPFHFSKAKSYRD 348
+G+K++ +LKW++S ++G SL EK F FS+ KS++D
Sbjct: 299 QGNKRYQRLKWLSSIVVDKEGNASNCSLRNEKSFFFSRVKSFKD 342
>SPCC1827.08c [R] KOG2997 F-box protein FBX9
Length = 356
Score = 103 bits (257), Expect = 4e-22
Identities = 93/352 (26%), Positives = 167/352 (47%), Gaps = 34/352 (9%)
Query: 6 EAIALWELGYSKETAGAMTDAIKYYRKALRMNPDVEKLYRKKMHDEW-RLNEEMKKLKLN 64
+A+ ++ E G + +++ YR A +++ DVE +YR+ + + NEE + L +
Sbjct: 18 KALLHYKDAIKSEREGNLGESLNKYRLAHKVHEDVESIYRRLERLQLCKRNEEEEMLNSD 77
Query: 65 SNVNIVDGSSETDPDGRKEETEGLSQTEDLVELPCWILDMLPDDILSMIIDMVVLSSADS 124
++ ++ SS P + E+ S ++++LP +L ++ ++ + + D+ LSS
Sbjct: 78 ASEAMLTVSSVPSPTLTENESVNESVVPNILKLPDEVLLVILENCIRDLHDLRYLSS--- 134
Query: 125 WMNLSLTCKKFNLLCFHDSSPYRTFAEYIYKKQVYNENEMRLNGISDIQALAETVWGQNY 184
++LTCK F DS YR+F +++ + ++ I I+ + Q++
Sbjct: 135 ---IALTCKHFAKALRADSL-YRSFCYCSCEQKEWQQS------IKSIEEELVEKYQQSW 184
Query: 185 RKMLKERPYIKFHGIYISVVNYLRHGSIPEGSSSLLNPIHMITYYRYFRFYPDGRCIRLL 244
+ + ++P +F G YISV Y R G+ +S PIH+ITYYRY R YP+ CI
Sbjct: 185 KTLFLKKPRSRFDGCYISVCRYFRPGT---SDTSWNQPIHLITYYRYLRLYPNSTCIVYQ 241
Query: 245 TTDEPNIVVPGFSLERCSERKDSDICSWSLSLDDGLDQLTIKRNRRKDG---------LE 295
+++EPN VV FS++ S S S +G LT + G
Sbjct: 242 SSNEPNDVVRNFSVQNTSLFSP---MSSSPMFSNGNVALTGSWSMTPSGEMLIVYPASQT 298
Query: 296 FNEILKISNRGHKKFSKLKWIA-SSATRQDGTTMQFSLSKEKPFHFSKAKSY 346
+ + K+ RG +LKWI+ S T + L+ + + FS+ SY
Sbjct: 299 YTYVQKLQVRG----IRLKWISFYSIHNYTSFTNEMPLTHNRDYVFSRVYSY 346
>Hs6912546 [R] KOG2997 F-box protein FBX9
Length = 447
Score = 94.7 bits (234), Expect = 2e-19
Identities = 99/367 (26%), Positives = 163/367 (43%), Gaps = 68/367 (18%)
Query: 17 KETAGAMTDAIKYYRKALRMNPDVE-KLYRKKMHDEWRLNEEMKKLKLNSNVNIVDGSSE 75
+E GA+ +AIK+YR+A+++ PD+E K+ + D + NS + D S+
Sbjct: 104 EEQNGALYEAIKFYRRAMQLVPDIEFKITYTRSPDGDGVG--------NSYIEDNDDDSK 155
Query: 76 TDPDGRKEETEGLSQTEDLVELPCWILD-------MLPDDILSMIIDMVVLSSAD--SWM 126
D + L+ E +++L L+ +LP ++L I VV S D S
Sbjct: 156 M-ADLLSYFQQQLTFQESVLKLCQPELESSQIHISVLPMEVLMYIFRWVVSSDLDLRSLE 214
Query: 127 NLSLTCKKFNLLCFHDSSPYRTFAEYIYKKQVYNENEMRLNGISDIQALAETVWGQNYRK 186
LSL C+ F +C D +R +++ G S I+ + T W R+
Sbjct: 215 QLSLVCRGF-YICARDPEIWRLAC-------------LKVWGRSCIKLVPYTSW----RE 256
Query: 187 MLKERPYIKFHGIYISVVNYLRHGSIPEGSSSLLNPIHMITYYRYFRFYPDGRCIRLLTT 246
M ERP ++F G+YIS Y+R G + H + YYRY RF+PDG + L T
Sbjct: 257 MFLERPRVRFDGVYISKTTYIRQGE--QSLDGFYRAWHQVEYYRYIRFFPDGHVMMLTTP 314
Query: 247 DEPNIVVPGFSLERCSERKDSDICS-WSLSLD-DGLDQLTIKRNRRKD------------ 292
+EP +VP L + R D+ + + LS D D ++ ++K+
Sbjct: 315 EEPQSIVP--RLRTRNTRTDAILLGHYRLSQDTDNQTKVFAVITKKKEEKPLDYKYRYFR 372
Query: 293 -------GLEFNEILKISNRGHKKFSKLKWIASS---ATRQDGTTMQFSLSKEK---PFH 339
F+ L++ + GH++F+KL WI S + G T + +K P
Sbjct: 373 RVPVQEADQSFHVGLQLCSSGHQRFNKLIWIHHSCHITYKSTGETAVSAFEIDKMYTPLF 432
Query: 340 FSKAKSY 346
F++ +SY
Sbjct: 433 FARVRSY 439
>Hs15812201 [R] KOG2997 F-box protein FBX9
Length = 437
Score = 94.7 bits (234), Expect = 2e-19
Identities = 99/367 (26%), Positives = 163/367 (43%), Gaps = 68/367 (18%)
Query: 17 KETAGAMTDAIKYYRKALRMNPDVE-KLYRKKMHDEWRLNEEMKKLKLNSNVNIVDGSSE 75
+E GA+ +AIK+YR+A+++ PD+E K+ + D + NS + D S+
Sbjct: 94 EEQNGALYEAIKFYRRAMQLVPDIEFKITYTRSPDGDGVG--------NSYIEDNDDDSK 145
Query: 76 TDPDGRKEETEGLSQTEDLVELPCWILD-------MLPDDILSMIIDMVVLSSAD--SWM 126
D + L+ E +++L L+ +LP ++L I VV S D S
Sbjct: 146 M-ADLLSYFQQQLTFQESVLKLCQPELESSQIHISVLPMEVLMYIFRWVVSSDLDLRSLE 204
Query: 127 NLSLTCKKFNLLCFHDSSPYRTFAEYIYKKQVYNENEMRLNGISDIQALAETVWGQNYRK 186
LSL C+ F +C D +R +++ G S I+ + T W R+
Sbjct: 205 QLSLVCRGF-YICARDPEIWRLAC-------------LKVWGRSCIKLVPYTSW----RE 246
Query: 187 MLKERPYIKFHGIYISVVNYLRHGSIPEGSSSLLNPIHMITYYRYFRFYPDGRCIRLLTT 246
M ERP ++F G+YIS Y+R G + H + YYRY RF+PDG + L T
Sbjct: 247 MFLERPRVRFDGVYISKTTYIRQGE--QSLDGFYRAWHQVEYYRYIRFFPDGHVMMLTTP 304
Query: 247 DEPNIVVPGFSLERCSERKDSDICS-WSLSLD-DGLDQLTIKRNRRKD------------ 292
+EP +VP L + R D+ + + LS D D ++ ++K+
Sbjct: 305 EEPQSIVP--RLRTRNTRTDAILLGHYRLSQDTDNQTKVFAVITKKKEEKPLDYKYRYFR 362
Query: 293 -------GLEFNEILKISNRGHKKFSKLKWIASS---ATRQDGTTMQFSLSKEK---PFH 339
F+ L++ + GH++F+KL WI S + G T + +K P
Sbjct: 363 RVPVQEADQSFHVGLQLCSSGHQRFNKLIWIHHSCHITYKSTGETAVSAFEIDKMYTPLF 422
Query: 340 FSKAKSY 346
F++ +SY
Sbjct: 423 FARVRSY 429
>Hs15812203 [R] KOG2997 F-box protein FBX9
Length = 327
Score = 86.3 bits (212), Expect = 6e-17
Identities = 76/274 (27%), Positives = 121/274 (43%), Gaps = 51/274 (18%)
Query: 102 LDMLPDDILSMIIDMVVLSSAD--SWMNLSLTCKKFNLLCFHDSSPYRTFAEYIYKKQVY 159
+ +LP ++L I VV S D S LSL C+ F +C D +R
Sbjct: 68 ISVLPMEVLMYIFRWVVSSDLDLRSLEQLSLVCRGF-YICARDPEIWRLAC--------- 117
Query: 160 NENEMRLNGISDIQALAETVWGQNYRKMLKERPYIKFHGIYISVVNYLRHGSIPEGSSSL 219
+++ G S I+ + T W R+M ERP ++F G+YIS Y+R G +
Sbjct: 118 ----LKVWGRSCIKLVPYTSW----REMFLERPRVRFDGVYISKTTYIRQGE--QSLDGF 167
Query: 220 LNPIHMITYYRYFRFYPDGRCIRLLTTDEPNIVVPGFSLERCSERKDSDICS-WSLSLD- 277
H + YYRY RF+PDG + L T +EP +VP L + R D+ + + LS D
Sbjct: 168 YRAWHQVEYYRYIRFFPDGHVMMLTTPEEPQSIVP--RLRTRNTRTDAILLGHYRLSQDT 225
Query: 278 DGLDQLTIKRNRRKD-------------------GLEFNEILKISNRGHKKFSKLKWIAS 318
D ++ ++K+ F+ L++ + GH++F+KL WI
Sbjct: 226 DNQTKVFAVITKKKEEKPLDYKYRYFRRVPVQEADQSFHVGLQLCSSGHQRFNKLIWIHH 285
Query: 319 S---ATRQDGTTMQFSLSKEK---PFHFSKAKSY 346
S + G T + +K P F++ +SY
Sbjct: 286 SCHITYKSTGETAVSAFEIDKMYTPLFFARVRSY 319
>7299643 [R] KOG2997 F-box protein FBX9
Length = 442
Score = 68.9 bits (167), Expect = 1e-11
Identities = 65/266 (24%), Positives = 113/266 (42%), Gaps = 36/266 (13%)
Query: 6 EAIALWELGYSKETAGAMTDAIKYYRKALRMNPDVEKLYRKKMHDEWRLNEEMKKLKLN- 64
+A +L+ E G + DA+ +YRKA ++ PD+E +R + +L+ ++ K LN
Sbjct: 66 KAESLYRTAVQLEQRGKVYDALPFYRKATQIVPDIE--FRFYEQQKQKLSNDVSKKYLNL 123
Query: 65 -----SNVNIVDGSSETDPDGRKEETE--------------GLSQTEDLVELPCWILDML 105
+++ E D E+ + S+ +++ D L
Sbjct: 124 ANDLAKQLDLGQSDGEEVVDNLYEKFQHDLRQKNIYNGKMIASSRDANVLTTGLHFAD-L 182
Query: 106 PDDILSMIIDMVVLSSAD--SWMNLSLTCKKFNLLCFHDSSPYRTFAEYIYKKQVYNENE 163
P +I+ I+ VV + D S + CK F + D +R ++ V E
Sbjct: 183 PPEIVMRILRWVVSAQLDMRSLEQCAAVCKGFYVYA-RDEELWRLACVKVWGHNV-GTLE 240
Query: 164 MRLNGISDIQALAETVWGQNYRKMLKERPYIKFHGIYISVVNYLRHGSIPEGSSSLLNPI 223
+ + +S++ ++R M R + F+G YIS YLR G P+
Sbjct: 241 AQDSDVSNVF--------HSWRDMFIRRDRVLFNGCYISKTTYLRMGE-NSFQDQFYRPV 291
Query: 224 HMITYYRYFRFYPDGRCIRLLTTDEP 249
++ YYRY RF PDG+ + + T DEP
Sbjct: 292 QLVEYYRYIRFLPDGKVLMMTTADEP 317
>At1g21760 [R] KOG2997 F-box protein FBX9
Length = 328
Score = 52.8 bits (125), Expect = 8e-07
Identities = 24/72 (33%), Positives = 41/72 (56%), Gaps = 3/72 (4%)
Query: 168 GISDIQALAETVWGQNYRKMLKERPYIKFHGIYISVVNYLRHGSIPEGSSSLLNPIHMIT 227
G+ + + ++ + ++RKM R ++ G+Y+S Y+R G + NP+H++
Sbjct: 111 GVIENYKILQSKYDGSWRKMWLLRSRVRTDGLYVSRNTYIRAGI---AEWKITNPVHIVC 167
Query: 228 YYRYFRFYPDGR 239
YYRY RFYP GR
Sbjct: 168 YYRYIRFYPSGR 179
Database: KOG eukaryal database 04/03
Posted date: Apr 14, 2003 1:07 PM
Number of letters in database: 30,389,216
Number of sequences in database: 60,738
Lambda K H
0.319 0.136 0.406
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 22,221,385
Number of Sequences: 60738
Number of extensions: 990599
Number of successful extensions: 2821
Number of sequences better than 1.0e-05: 7
Number of HSP's better than 0.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 2803
Number of HSP's gapped (non-prelim): 13
length of query: 349
length of database: 30,389,216
effective HSP length: 107
effective length of query: 242
effective length of database: 23,890,250
effective search space: 5781440500
effective search space used: 5781440500
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)