ORF STATUS Function Best COG Functional category Pathways and functional systems
r_klactVI5277 check: MH S KOG0309 Function unknown Conserved WD40 repeat-containing protein
Only best alignment is shown:
BLASTP 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= r_klactVI5277 1826828 1830226 1133
(1133 letters)
Database: KOG eukaryal database 04/03
60,738 sequences; 30,389,216 total letters
Searching..................................................done
Color Key for Alignment Scores: 
Score E
Sequences producing significant alignments: (bits) Value
YDR128w [S] KOG0309 Conserved WD40 repeat-containing protein 1042 0.0
SPAC11E3.05 [S] KOG0309 Conserved WD40 repeat-containing protein 434 e-121
7297816 [S] KOG0309 Conserved WD40 repeat-containing protein 167 9e-41
Hs19923624 [S] KOG0309 Conserved WD40 repeat-containing protein 89 3e-17
At4g35050 [B] KOG0264 Nucleosome remodeling factor subunit CAF1/... 82 6e-15
At2g16780 [B] KOG0264 Nucleosome remodeling factor subunit CAF1/... 80 2e-14
Hs14149987 [S] KOG0269 WD40 repeat-containing protein 74 1e-12
7301821 [S] KOG0269 WD40 repeat-containing protein 72 6e-12
CE16234 [B] KOG0264 Nucleosome remodeling factor subunit CAF1/NU... 69 4e-11
Hs5032027 [B] KOG0264 Nucleosome remodeling factor subunit CAF1/... 68 7e-11
YMR131c [R] KOG0302 Ribosome Assembly protein 67 2e-10
7290331 [R] KOG0266 WD40 repeat-containing protein 67 2e-10
7302218 [R] KOG0302 Ribosome Assembly protein 67 2e-10
7299974 [B] KOG0264 Nucleosome remodeling factor subunit CAF1/NU... 67 2e-10
SPAC29A4.18 [B] KOG0264 Nucleosome remodeling factor subunit CAF... 66 3e-10
At2g19520 [B] KOG0264 Nucleosome remodeling factor subunit CAF1/... 66 3e-10
At5g08390 [D] KOG0267 Microtubule severing protein katanin p80 s... 65 5e-10
ECU07g0750 [B] KOG0264 Nucleosome remodeling factor subunit CAF1... 65 8e-10
YPL247c [S] KOG0290 Conserved WD40 repeat-containing protein AN11 64 1e-09
Hs4506439 [B] KOG0264 Nucleosome remodeling factor subunit CAF1/... 64 1e-09
CE11860 [B] KOG0264 Nucleosome remodeling factor subunit CAF1/NU... 64 1e-09
At5g23430 [D] KOG0267 Microtubule severing protein katanin p80 s... 64 1e-09
At1g29260 [U] KOG0277 Peroxisomal targeting signal type 2 receptor 64 1e-09
Hs5031817 [D] KOG0267 Microtubule severing protein katanin p80 s... 64 1e-09
7296695 [A] KOG0284 Polyadenylation factor I complex subunit PFS2 64 1e-09
Hs16554627 [R] KOG0266 WD40 repeat-containing protein 64 2e-09
Hs22048320 [B] KOG0264 Nucleosome remodeling factor subunit CAF1... 62 4e-09
7292737 [A] KOG0285 Pleiotropic regulator 1 62 4e-09
SPCC1672.10 [B] KOG0264 Nucleosome remodeling factor subunit CAF... 62 7e-09
CE27292 [R] KOG0302 Ribosome Assembly protein 61 9e-09
7296245 [A] KOG0265 U5 snRNP-specific protein-like factor and re... 61 9e-09
Hs9506645 [R] KOG0266 WD40 repeat-containing protein 61 1e-08
At4g29730 [B] KOG0264 Nucleosome remodeling factor subunit CAF1/... 61 1e-08
At1g11160 [D] KOG0267 Microtubule severing protein katanin p80 s... 60 1e-08
YPL151c [A] KOG0285 Pleiotropic regulator 1 60 2e-08
Hs4507703 [S] KOG1007 WD repeat protein TSSC1 WD repeat superfamily 60 2e-08
At1g76260 [S] KOG1007 WD repeat protein TSSC1 WD repeat superfamily 60 2e-08
SPAC4F8.11 [S] KOG0269 WD40 repeat-containing protein 60 3e-08
SPAC25H1.06 [B] KOG0264 Nucleosome remodeling factor subunit CAF... 60 3e-08
Hs18544419 [A] KOG0272 U4/U6 small nuclear ribonucleoprotein Prp... 60 3e-08
SPAP17D4.01 [U] KOG0277 Peroxisomal targeting signal type 2 rece... 59 4e-08
Hs4505731 [U] KOG0277 Peroxisomal targeting signal type 2 receptor 59 4e-08
YGL137w [U] KOG0276 Vesicle coat complex COPI beta' subunit 59 6e-08
SPBC577.09 [KL] KOG4283 Transcription-coupled repair protein CSA... 59 6e-08
At1g61210 [D] KOG0267 Microtubule severing protein katanin p80 s... 59 6e-08
SPBP22H7.07 [A] KOG0285 Pleiotropic regulator 1 58 1e-07
SPBC354.03 [R] KOG0266 WD40 repeat-containing protein 58 1e-07
Hs4758558 [A] KOG0272 U4/U6 small nuclear ribonucleoprotein Prp4... 58 1e-07
Hs13899346 [R] KOG0302 Ribosome Assembly protein 58 1e-07
YPR178w [A] KOG0272 U4/U6 small nuclear ribonucleoprotein Prp4 (... 57 1e-07
SPAC29E6.01 [S] KOG0281 Beta-TrCP (transducin repeats containing... 57 1e-07
Hs14149734 [Z] KOG0303 Actin-binding protein Coronin contains WD... 57 1e-07
At5g58230 [B] KOG0264 Nucleosome remodeling factor subunit CAF1/... 57 1e-07
YDL195w [U] KOG0307 Vesicle coat complex COPII subunit SEC31 57 2e-07
Hs8922428 [S] KOG0271 Notchless-like WD40 repeat-containing protein 57 2e-07
Hs19923529 [A] KOG0284 Polyadenylation factor I complex subunit ... 57 2e-07
CE00901 [R] KOG0266 WD40 repeat-containing protein 57 2e-07
SPCC18.05c [S] KOG0271 Notchless-like WD40 repeat-containing pro... 57 2e-07
Hs16445438 [R] KOG0644 Uncharacterized conserved protein contain... 57 2e-07
Hs16445436 [R] KOG0644 Uncharacterized conserved protein contain... 57 2e-07
CE28516 [S] KOG0269 WD40 repeat-containing protein 57 2e-07
At2g32700 [R] KOG0266 WD40 repeat-containing protein 57 2e-07
SPAC144.13c [DO] KOG0305 Anaphase promoting complex Cdc20 Cdh1 a... 56 3e-07
Hs4758560 [A] KOG0265 U5 snRNP-specific protein-like factor and ... 56 3e-07
Hs4505895 [A] KOG0285 Pleiotropic regulator 1 56 3e-07
CE05533 [A] KOG0285 Pleiotropic regulator 1 56 3e-07
SPBC15D4.14 [K] KOG0263 Transcription initiation factor TFIID su... 56 4e-07
Hs13629793 [A] KOG0265 U5 snRNP-specific protein-like factor and... 56 4e-07
At2g43770 [A] KOG0265 U5 snRNP-specific protein-like factor and ... 55 5e-07
YEL056w [B] KOG0264 Nucleosome remodeling factor subunit CAF1/NU... 55 6e-07
SPBC8D2.20c [U] KOG0307 Vesicle coat complex COPII subunit SEC31 55 6e-07
Hs4758032 [U] KOG0276 Vesicle coat complex COPI beta' subunit 55 6e-07
At4g15900 [A] KOG0285 Pleiotropic regulator 1 55 6e-07
At1g20540 [S] KOG1007 WD repeat protein TSSC1 WD repeat superfamily 55 6e-07
7298053 [U] KOG0276 Vesicle coat complex COPI beta' subunit 55 6e-07
SPCC5E4.03c [K] KOG0263 Transcription initiation factor TFIID su... 55 8e-07
CE21113 [A] KOG0284 Polyadenylation factor I complex subunit PFS2 55 8e-07
At4g02730 [R] KOG0266 WD40 repeat-containing protein 55 8e-07
7301796 [A] KOG0272 U4/U6 small nuclear ribonucleoprotein Prp4 (... 55 8e-07
CE28600 [S] KOG0281 Beta-TrCP (transducin repeats containing)/Sl... 54 1e-06
CE27713 [A] KOG0265 U5 snRNP-specific protein-like factor and re... 54 1e-06
7296187 [S] KOG0271 Notchless-like WD40 repeat-containing protein 54 1e-06
HsM6005894_2 [R] KOG4155 FOG: WD40 repeat 54 1e-06
Hs21536371_2 [R] KOG4155 FOG: WD40 repeat 54 1e-06
ECU03g1520 [DO] KOG0305 Anaphase promoting complex Cdc20 Cdh1 an... 54 2e-06
At4g32551 [R] KOG0266 WD40 repeat-containing protein 54 2e-06
At1g52360 [U] KOG0276 Vesicle coat complex COPI beta' subunit 54 2e-06
At5g50230 [R] KOG0288 WD40 repeat protein TipD 53 2e-06
At5g43920 [S] KOG0293 WD40 repeat-containing protein 53 2e-06
At2g19540 [R] KOG0302 Ribosome Assembly protein 53 2e-06
CE29560 [S] KOG0300 WD40 repeat-containing protein 53 3e-06
CE26861 [S] KOG0300 WD40 repeat-containing protein 53 3e-06
At2g05720 [A] KOG0272 U4/U6 small nuclear ribonucleoprotein Prp4... 53 3e-06
At5g52820 [S] KOG0271 Notchless-like WD40 repeat-containing protein 52 4e-06
7303990 [U] KOG0307 Vesicle coat complex COPII subunit SEC31 52 4e-06
7300706 [S] KOG0281 Beta-TrCP (transducin repeats containing)/Sl... 52 4e-06
Hs16306498 [S] KOG0281 Beta-TrCP (transducin repeats containing)... 52 5e-06
Hs16306496 [S] KOG0281 Beta-TrCP (transducin repeats containing)... 52 5e-06
Hs16306494 [S] KOG0281 Beta-TrCP (transducin repeats containing)... 52 5e-06
7293188 [D] KOG0267 Microtubule severing protein katanin p80 sub... 52 5e-06
SPAC227.12 [A] KOG0272 U4/U6 small nuclear ribonucleoprotein Prp... 52 7e-06
CE03924 [Z] KOG0318 WD40 repeat stress protein/actin interacting... 52 7e-06
At5g24520 [S] KOG0290 Conserved WD40 repeat-containing protein AN11 52 7e-06
At1g79990 [U] KOG0276 Vesicle coat complex COPI beta' subunit 52 7e-06
7293972 [A] KOG0272 U4/U6 small nuclear ribonucleoprotein Prp4 (... 52 7e-06
YCR072c [S] KOG0271 Notchless-like WD40 repeat-containing protein 51 9e-06
Hs4502477 [S] KOG0281 Beta-TrCP (transducin repeats containing)/... 51 9e-06
Hs16117783 [S] KOG0281 Beta-TrCP (transducin repeats containing)... 51 9e-06
CE11748 [R] KOG0266 WD40 repeat-containing protein 51 9e-06
At5g54520 [S] KOG0282 mRNA splicing factor 51 9e-06
7300980 [R] KOG4155 FOG: WD40 repeat 51 9e-06
>YDR128w [S] KOG0309 Conserved WD40 repeat-containing protein
Length = 1148
Score = 1042 bits (2694), Expect = 0.0
Identities = 531/1162 (45%), Positives = 726/1162 (61%), Gaps = 50/1162 (4%)
Query: 1 MSEYVGEGPYSSPTFGKSLSLRVDGGFNAVSINPSGRDVVLASRKGLYVVDLDDPFSEPR 60
M + EGPY+SPTFGKSLSL+VDGGFNAVSINPSGRD+VLASR+GLY++DLDDPF+ PR
Sbjct: 1 MCSSINEGPYNSPTFGKSLSLKVDGGFNAVSINPSGRDIVLASRQGLYIIDLDDPFTPPR 60
Query: 61 WLHHLTSWEVADVQWCPHPAKHHWVISTSNQKAIVWNLSRSSSKAVEHVLHGHFRAITDI 120
WLHH+T W+VADVQW PHPAK +W++STSNQKAI+WNL++SSS A+E VLHGH RAITDI
Sbjct: 61 WLHHITPWQVADVQWSPHPAKPYWIVSTSNQKAIIWNLAKSSSNAIEFVLHGHSRAITDI 120
Query: 121 NFHPLQPEILATSSIDTYALAWDMRSPKKPYFRTSNWRSGAAQVKWNHKNSNVLATSHSN 180
NF+P P++LAT S+DTY AWDMRSP +P++ TS+WRS A+QVKWN+K+ NVLA+SH N
Sbjct: 121 NFNPQHPDVLATCSVDTYVHAWDMRSPHRPFYSTSSWRSAASQVKWNYKDPNVLASSHGN 180
Query: 181 IVYVWDVRKGTSPLSVLEGHSGSVNSIDFNPFNETEIMSSGNDGTVKFWDYNKVEDELQM 240
++VWD+RKG++PL L+GH SVNSIDFN F +EIMSS NDGTVKFWDY+K E +
Sbjct: 181 DIFVWDLRKGSTPLCSLKGHVSSVNSIDFNRFKYSEIMSSSNDGTVKFWDYSKSTTESKR 240
Query: 241 TITTEFPVWRGRYLPFGDGYCIMPMIGGNNSVYLANSFHDSGNSESRTTKLQPTYVFKGH 300
T+TT FP+WRGRYLPFG+GYCIMPM+GGNN+VYL N D + +++ TKLQP Y FKGH
Sbjct: 241 TVTTNFPIWRGRYLPFGEGYCIMPMVGGNNAVYLINLCDDDDSEQNKKTKLQPIYAFKGH 300
Query: 301 TDRVTDFLWRSRHSQNTIIDDREFQLVTWSKDCDLRLWPVPDMVYDKVHYECGKELPEKL 360
+DRV DFLWRSRH+ + DDREFQLVTWSKDCDL+LWP+ D +Y KV+++ GK L EKL
Sbjct: 301 SDRVIDFLWRSRHTCDGDYDDREFQLVTWSKDCDLKLWPISDSIYGKVNFDRGKRLEEKL 360
Query: 361 PDYDYDTFRSEPEN--NIVDPRYTNIEIPKETFVTKSGLRQWKADNNIDQLQWISGVRMH 418
PDYDY ++ EPEN N+ + + +E FVT SGL++ N + + W+SG+RM+
Sbjct: 361 PDYDYCSYNKEPENRENVQKNEFRRL---RENFVTTSGLKK----NKTNHITWLSGIRMN 413
Query: 419 NEDSPHDLFEEVSLNNLGEEVTSVGHKFPRIVFEKISVSTGELIITLNGPWVEEDPEKYI 478
+ S DLF E + NLGEEV+++GHKFP++VFEKISVST EL +TLNGPW EE+P+ YI
Sbjct: 414 SATSQEDLFNETKIQNLGEEVSAIGHKFPKVVFEKISVSTRELCLTLNGPWSEENPDDYI 473
Query: 479 FMRIIINFPPNYPMKGNEPAFKIEENRELKEHQKTQIMERLREISKKYVDANRYCLEPCL 538
F+RI INFP NYP KG+ P F IEEN L ++ +I+ L I +KY D+N YCLEPC+
Sbjct: 474 FLRISINFPLNYPNKGDPPKFTIEENSNLTMSKRQEILSNLATIGQKYTDSNLYCLEPCI 533
Query: 539 QYLLGEEVNLDISDMEDDNK-IFSFDFED-VTXXXXXXXXXXXXXXXAPTEISSVSDVE- 595
+++LGE+V+L+ D+E+ + + +FD D + P +SS SD+E
Sbjct: 534 RFVLGEKVSLE--DIEEGQEPLLNFDIADHIDFEELSSLDSSYSDSQNPENLSSQSDIES 591
Query: 596 ----FAVGDGSLQLYSSTPEPKFDSTPVPNGCGAVWTAQGTLVCFFRAENKTEKKQHAII 651
D S Q D+TPVPNGCG+ WTA G L CFF E K EKKQ+AII
Sbjct: 592 YKEALVFPDTSNQGLDFGRNLALDTTPVPNGCGSCWTATGELFCFFANEKKPEKKQNAII 651
Query: 652 NVGRTGIG----------GFVRSKNVQSASQTLKDNVSGKQRKPKTYREALSINSQHASE 701
+ + G + K V S+ T D + + PK Y + L + +
Sbjct: 652 KLSQKEAGVEKHPFKIEPQVLYDKEVDSSVITAADELKAR---PKRYVDTLGLGGGTNGD 708
Query: 702 SLNQXXXXXXXXXXX-XYAEFLDDILKNDLTLRTRMPMMPRIFRDEXXXXXXXXXXXXXX 760
S A+ DDIL+ND+ +RT++P++ F+
Sbjct: 709 SRTYFDDETSSDDSFDSVADDWDDILRNDIIVRTKIPILRGNFK-AFSSVHSESGKTVES 767
Query: 761 XXXXXXXIVVQDFKSLIPDKKELAEQYILFRETPEFVAKYNAGIAESYGYEDIAQCWRMI 820
++ ++F SL+ D+KELA +Y+ TPE A+ NA +AE + ++I+ CW+++
Sbjct: 768 TKKNKNLVISKNFSSLLSDRKELALEYLFMDATPEGFARNNALVAEKFDLDEISHCWQIL 827
Query: 821 SNVLIGRGDNDFYNYDWDQHSLGGKLLVKRLFEYFEKCQNLQMLAMMSCIFATLGRPDQK 880
S++LI + D D Y W+ H +G K +K YFE+ QNLQMLAM+ C+ + R
Sbjct: 828 SDMLIDQSDYDPYTTIWNNHPMGIKWFIKEAIVYFERQQNLQMLAMLCCVILSARRKKIP 887
Query: 881 TNYKLVPPTLSENIITFYNNEYEPSPHVHSTHGSFYSNDTGTQNARMRYGTNQASLN--- 937
Y E I F +NE + + + + + T YG + N
Sbjct: 888 ARYYGQELENMEGTIVFNDNESQNTSFWKGSDAFSTRSRSSTVTPNF-YGNHLRGKNIHG 946
Query: 938 -DGSSIISDDYF-----HQXXXXXXXXXXXXXXXXXXXYVET--EATIPDIKIKLIHDDV 989
D SSI SDD+ H + + +PDIK++L+HDD+
Sbjct: 947 GDNSSIRSDDHHARLRTHNTLNGSSKFTEPAQKQGSRAISSSPFHSRMPDIKVELLHDDI 1006
Query: 990 LDLAYQGLEPSLVDPKCETKFRQYRTQYAEILYIWGLPMDRAELLKFNVNLNTEPEYLHG 1049
++ AY+ + ++ KF+ Y QY+++L+ WGLP++R ++LK + + +
Sbjct: 1007 IE-AYEQEDLLHLEVSDIPKFQTYIYQYSKLLFRWGLPLERVKILKVSTDFRSSYSSQGI 1065
Query: 1050 IEQDSGLDIYKGVSNRWIESNHGHTQQ----NCSYCGLKAGRLVFVCGNCQHVTHRTCAE 1105
++ Y GV WIE+N ++ NC+YC L+ R F+CGNCQHV H +CA
Sbjct: 1066 PPNNNKKSPYNGVLTHWIENNEFGEEKFLARNCNYCDLRVTRSSFICGNCQHVLHSSCAR 1125
Query: 1106 KWWKIGDECPSGCSCDCIKNFD 1127
WW+IGDECPSGC C+C + FD
Sbjct: 1126 IWWEIGDECPSGCGCNCPEMFD 1147
>SPAC11E3.05 [S] KOG0309 Conserved WD40 repeat-containing protein
Length = 1323
Score = 434 bits (1115), Expect = e-121
Identities = 291/919 (31%), Positives = 448/919 (48%), Gaps = 103/919 (11%)
Query: 8 GPYSSPTFGKSLSLRVDGGFNAVSINPSGRDVVLASRKGLYVVDLDDPFSEPRWLHHLTS 67
GP+ S TF + LS+ V+ A+S++P GRD+ LASR GL V+DLD+P++ PR L H T
Sbjct: 216 GPFDSTTFDRQLSIEVNQPVGAMSLSPCGRDIALASRYGLLVLDLDNPYNPPRMLRHSTP 275
Query: 68 WEVADVQWCPHPAKHHWVISTSNQKAIVWNLSRSSSKAVEHVLHGHFRAITDINFHPLQP 127
WEVAD QW H A+ WV+STS+QK IVWNL+ + +A+E +LHGH RA+TD+N+H P
Sbjct: 276 WEVADTQWNVHAARDQWVVSTSSQKTIVWNLALPNDRAIEFMLHGHTRAVTDMNWHRQNP 335
Query: 128 EILATSSIDTYALAWDMRSPKKPYFRTSNWRSGAAQVKWNHKNSNVLATSHSNIVYVWDV 187
++LAT SID+ WD+RSP+ P +W +GA QVKWN+KN ++LA+SH +V +WD
Sbjct: 336 DVLATCSIDSSVHCWDLRSPRFPVNSFYDWHNGATQVKWNYKNPHILASSHGRLVRIWDD 395
Query: 188 RKGTSPLSVLEGHSG--SVNSIDFNPFNETEIMSSGNDGTVKFWDYNKVEDELQMTITTE 245
R G++PL ++ +N ++FN ET +++ D TVKFW+Y K +E + ITT+
Sbjct: 396 RYGSAPLHTIKTSENITKINGLEFNRACETRLLTCAMDRTVKFWNYEKSTEEPEHLITTD 455
Query: 246 FPVWRGRYLPFGDGYCIMPMIGGNNSVYLANSFHDSGNSESRTTKLQPTYVFKGHTDRVT 305
PVW+ R+ PFGDG +MP G+NSV++ +D N + + + F GHTD+V
Sbjct: 456 SPVWKARFTPFGDGVILMPQ-RGDNSVHM----YDCRNLDKEGPR--AVHRFAGHTDQVK 508
Query: 306 DFLWRSRHSQNTIIDDREFQLVTWSKDCDLRLWPVPDMVYDKVHYECGKELPEKLP--DY 363
+FLWR R D R+FQL+TWSKD +RLWP+ + + + + ++ K +P KL
Sbjct: 509 EFLWRCRGEDVFDRDLRDFQLITWSKDHHVRLWPIGNDILNSMGHDRTKPVPFKLTRLGA 568
Query: 364 DYDTFRSEP-------------------ENNIVDPR------------YTNIEIPKETFV 392
Y T+ EP ++N R + N + K
Sbjct: 569 KYRTYSREPLKQSLINTECDSSDAMNSFDSNFGAERANTSDLSRGFVAFANRKKSKYNLP 628
Query: 393 TKSGL--RQWKADNNIDQLQWISGV---RMHNEDSPHDLFEEVSLNNLGEEVTSVGHKFP 447
SG R K+ N + L W+ G+ R+ N D EV NLGEE++ +G K+
Sbjct: 629 GSSGFMTRSTKSTNPMTPLNWLRGISMGRLGNAD------WEVP-QNLGEELSWIGQKYS 681
Query: 448 RIVFEKISVSTGELIITLNGPWVEEDPEKYIFMRIIINFPPNYPMKGNEPAFKIEENREL 507
+ FEKI V+ I+LN P + +D Y ++R+ + FP NYP+ P F++E +
Sbjct: 682 NVSFEKIDVAERTCTISLNAPILPDD--GYAYIRLHVYFPNNYPISAT-PVFQLERSSAF 738
Query: 508 KEHQKTQIMERLREISKKYVDANRYCLEPCLQYLLGEEVNLDISDMEDDNKIFSFDFEDV 567
+ Q + L IS + + +++YC++ CL YL G NL + ++I+ F+
Sbjct: 739 NDEQFNYVFNTLTSISDQCISSHKYCMDACLSYLSG---NLSV------DEIWKLGFQKD 789
Query: 568 TXXXXXXXXXXXXXXXAPTEISSVSDVEFAVGDGSLQLYSSTPEPKFDSTPVPNGCGAVW 627
P S +F GD L K + P+P C A++
Sbjct: 790 NSDSSSESSADIFQDVFP------SMPDFRGGDRGL-------SHKHQNIPLPKTCAAIF 836
Query: 628 TAQGTLVCFFRAENKTEKKQHAIINVGRTGIGGFVRSKNVQSASQTLKDNVSGKQRKPKT 687
LVCFF + E A N G S V +S ++ D+ S
Sbjct: 837 CGNDELVCFFTIK-ADESAAQATANRETHGRQKLFESFGVLDSSNSVADSDS------TN 889
Query: 688 YREALSINSQHASESLNQX--XXXXXXXXXXXYAEFLDDILKNDLTLRTRMPMMPR---- 741
Y + S+N SES ++ + + I N++ + M R
Sbjct: 890 YDDENSLNRGGTSESDSEFIWDVDESNSGSIVFPKSKTSINLNNINSASASIMGSRFGAA 949
Query: 742 -IFRDEXXXXXXXXXXXXXXXXXXXXXIVVQ--DFKSLIPDKKELAEQYILFRETPEFVA 798
IF + VV+ +P K+ LA +Y++ V
Sbjct: 950 DIFMSKRPSTKGSNRPSILLSKPSHDFHVVRIISMSKYLPVKRALAAEYVVDTGDKVTVC 1009
Query: 799 KYNAGIAESYGYEDIAQCWRMISNVL--IGRGD-----NDFYNYDWDQHSLGGKLLVKRL 851
NA ++ + Y +A+ W M+ +L + R + ND + W + L K +V L
Sbjct: 1010 NKNAEVSAKHNYYRLAKVWLMLGRLLGHLSRTENKDHINDEEAFPWLKSPL-AKWVVNSL 1068
Query: 852 FEYFEKCQNLQMLAMMSCI 870
+Y+ N QMLAM++C+
Sbjct: 1069 LDYYASQCNTQMLAMLACV 1087
Score = 69.7 bits (169), Expect = 2e-11
Identities = 37/120 (30%), Positives = 57/120 (46%), Gaps = 4/120 (3%)
Query: 1007 ETKFRQYRTQYAEILYIWGLPMDRAELLKFNVNLNTEPEYLHGIEQDSGLDIYKGVSNRW 1066
+ KF Q+R YAE L +WG + + E+LKFN + + P + + + +
Sbjct: 1194 QQKFIQWRATYAEQLDLWGFFIPKLEMLKFNAHEFSSPSEKTLVNHCNSCNSTTSNTRIC 1253
Query: 1067 IESNHGHTQQNCSYCGLKAGRLVFVCGNCQHVTHRTCAEKWWKIGD----ECPSGCSCDC 1122
+ + +C++C L L VCG C HV H C ++W+ GD C SGC C C
Sbjct: 1254 EKCYSLVPRMSCTFCCLSIHGLCIVCGLCLHVMHEDCYKEWFSNGDSISQSCSSGCGCKC 1313
>7297816 [S] KOG0309 Conserved WD40 repeat-containing protein
Length = 1004
Score = 167 bits (423), Expect = 9e-41
Identities = 151/563 (26%), Positives = 246/563 (42%), Gaps = 94/563 (16%)
Query: 24 DGGFNAVSINPSGRDVVLASRKGLYVVDLDDPFSEPRWLHHLTSWEVADVQWCPHPA-KH 82
D A+S++ SG+ V+LA R L + L R + +EV+ ++ P+ K
Sbjct: 40 DSQATAMSVDYSGQWVLLAGRGHLALQRLGQDDGSLRRHERQSKYEVSVAEFAICPSRKE 99
Query: 83 HWVISTSNQKAIV-WNLSRSSSKAVEHVLHGHFRAITDINFHPLQPEILATSSIDTYALA 141
+ I+TS IV W ++ E L GH R +TDI++H P +L + SIDT++
Sbjct: 100 YCAIATSQHIDIVRWG---TAEPHYEMSLRGHTRTVTDIDWHGKDPNLLVSCSIDTFSHI 156
Query: 142 WDMRSPKKPYFRTSN-WRSGAAQVKWNHKNSNVLATSHSNIVYVWDVRKGTSPLSVLEGH 200
WD+R P+KP + SGA QV +N + N+LA +H + +WD+RKG+ P + H
Sbjct: 157 WDLREPRKPALSLNAVCMSGATQVGFNRVSGNLLAAAHDGDLRIWDIRKGSCPTHYITAH 216
Query: 201 SGSVNSIDFNPFNETEIMSSGNDGTVKFWDYNKVEDELQMTITTEFPVWRGRYL------ 254
V+ I+++ ET + ++ DGTVK++D + ITT PVWR RY
Sbjct: 217 LNRVHGINWSHKRETCLATASQDGTVKYFDVCNPR-RAEKIITTMSPVWRARYTVIYIGL 275
Query: 255 --------------PFGDGY--CIMPMIG-GNNSVYLANSFHDSGNSESRTTKLQPTYVF 297
P G+G ++P +G G NS+ L S + + P F
Sbjct: 276 SILIAILNTSCSIQPIGNGLVSIVVPHLGRGENSLLL----------WSNSKQTDPICSF 325
Query: 298 KGHTDRVTDFLWR-SRHSQNTIIDDREFQLVTWSKDCDLRLWPVPDMVYDKVHYECGKEL 356
GHTD + DF WR +R S N E +LVTWS+D LR+W + D + K+ +E+
Sbjct: 326 VGHTDVILDFAWRPNRESSN------EIELVTWSRDRTLRVWKIDDNML-KLCEPSAEEI 378
Query: 357 PEKLPDYDYDTFRSEPENNIVDPRYTNIEIPKETFVTKSGLRQWKADNNIDQLQWIS--- 413
+ + D R + PR + + + L D + L
Sbjct: 379 ESRF-EPDLSELRVPTPPEFLHPR---------SILVAASLPISTGDGACNTLPMARSPS 428
Query: 414 -GVRMHNEDSPHDLFEEVSLNNLGEEVTSVGHKFPRIVFEKISVSTGELIITLNGPWVEE 472
G + + PH ++ + + S+ H+F ++ N P VE
Sbjct: 429 FGGGYYRREEPH-----IARSLTDQPTCSLHHEFS--------------LLNTNMPHVEV 469
Query: 473 DP----EKYIFMRII---------INFPPNYPMKGNEPAFKIEENRELKEHQKTQIMERL 519
D ++Y +I + F +YP P F++ + L +++ L
Sbjct: 470 DTLDAIKRYACFKICAGGHTVILQVTFTTSYPSPSAPPDFQLCQGTTLSSEVSGVLLKVL 529
Query: 520 REISKKYVDANRYCLEPCLQYLL 542
R + + V +R CLE CL+ L+
Sbjct: 530 RCNALQRVKKSRTCLEQCLRALV 552
>Hs19923624 [S] KOG0309 Conserved WD40 repeat-containing protein
Length = 722
Score = 89.4 bits (220), Expect = 3e-17
Identities = 87/364 (23%), Positives = 142/364 (38%), Gaps = 49/364 (13%)
Query: 768 IVVQDFKSLIPDKKELAEQYILFRETPEFVAKYNAGIAESYGYEDIAQCWRMIS---NVL 824
+++QD L+P K L E YIL + + NA A G +D+ Q W + + ++
Sbjct: 395 VIIQDIACLLPVHKSLGELYILNVNDIQETCQKNAASALLVGRKDLVQVWSLATVATDLC 454
Query: 825 IGRGDNDFYNYDWDQHSLGGKLLVKRLFEYFEKCQNLQMLAMMSCIFATLGRPDQKTNYK 884
+G + W +H G +LL + L ++ + +++Q LAM+ +F RP N
Sbjct: 455 LGPKSDPDLETPWARHPFGRQLL-ESLLAHYCRLRDVQTLAMLCSVFEAQSRPQGLPNPF 513
Query: 885 LVPPTLSENIITFYNNEYEPSPHVHSTHGSFYSNDTGTQNARMRYGTNQASLNDGSSIIS 944
P S N++ HS + SF S+ + + + LN G I+
Sbjct: 514 GPFPNRSSNLVVS-----------HSRYPSFTSSGSCSS-------MSDPGLNTGGWNIA 555
Query: 945 DDYFHQXXXXXXXXXXXXXXXXXXXYVETEATIPDIKIKLIHDDVLDLAYQGLEPSLVDP 1004
Y + P + + HD L+DP
Sbjct: 556 GREAEHLSSPWGESSPEELRFGSLTYSD-----PRERERDQHDK---------NKRLLDP 601
Query: 1005 KCETKFRQYRTQYAEILYIWGLPMDRAELLKFNVNLNTEPEYLHGIEQDSGLDIYKGVSN 1064
+F ++ Y EILY WGL RAE+LKF ++ P+ GIE +Y
Sbjct: 602 ANTQQFDDFKKCYGEILYRWGLREKRAEVLKF---VSCPPDPHKGIE----FGVYCSHCR 654
Query: 1065 RWIESNH-----GHTQQNCSYCGLKAGRLVFVCGNCQHVTHRTCAEKWWKIGDECPSGCS 1119
+ G T Q C+ C + C C H H + +W++ + CP+GC
Sbjct: 655 SEVRGTQCAICKGFTFQ-CAICHVAVRGSSNFCLTCGHGGHTSHMMEWFRTQEVCPTGCG 713
Query: 1120 CDCI 1123
C C+
Sbjct: 714 CHCL 717
>At4g35050 [B] KOG0264 Nucleosome remodeling factor subunit CAF1/NURF55/MSI1
Length = 424
Score = 81.6 bits (200), Expect = 6e-15
Identities = 55/167 (32%), Positives = 91/167 (53%), Gaps = 16/167 (9%)
Query: 81 KHHWVISTS-NQKAIVWNLSRSSSKAV---EHVLHGHFRAITDINFHPLQPEILATSSID 136
K +++S S +Q+ +W++S +++ V HV GH I D+ +H I ++ D
Sbjct: 181 KEGYLLSGSQDQRICLWDVSATATDKVLNPMHVYEGHQSIIEDVAWHMKNENIFGSAGDD 240
Query: 137 TYALAWDMRSPK-----KPYFRTSNWRSGAAQVKWNHKNSNVLATSHSN-IVYVWDVRKG 190
+ WD+R+ + K + R N+ S +N N VLAT+ S+ V ++D+RK
Sbjct: 241 CQLVIWDLRTNQMQHQVKVHEREINYLS------FNPFNEWVLATASSDSTVALFDLRKL 294
Query: 191 TSPLSVLEGHSGSVNSIDFNPFNETEIMSSGNDGTVKFWDYNKVEDE 237
T+PL VL H G V ++++P +ET + SSG D + WD N+V DE
Sbjct: 295 TAPLHVLSKHEGEVFQVEWDPNHETVLASSGEDRRLMVWDINRVGDE 341
Score = 55.8 bits (133), Expect = 4e-07
Identities = 60/286 (20%), Positives = 111/286 (37%), Gaps = 51/286 (17%)
Query: 88 TSNQKAIVWNLSRSSSKAVEHV------LHGHFRAITDINFHPLQPEILATSSIDTYALA 141
TS + +++ +R S K L GH + + + + L + S D
Sbjct: 137 TSGSEVFLFDYARLSGKPQTSECDPDLRLMGHEQEGYGLAWSSFKEGYLLSGSQDQRICL 196
Query: 142 WDMRSPK-----KPYFRTSNWRSGAAQVKWNHKNSNVLATSHSNI-VYVWDVRKGTSPLS 195
WD+ + P +S V W+ KN N+ ++ + + +WD+R
Sbjct: 197 WDVSATATDKVLNPMHVYEGHQSIIEDVAWHMKNENIFGSAGDDCQLVIWDLRTNQMQHQ 256
Query: 196 VLEGHSGSVNSIDFNPFNETEIMSSGNDGTVKFWDYNKVEDELQMTITTEFPVWRGRYLP 255
V + H +N + FNPFNE + ++ +D TV +D K+ L + E V++ + P
Sbjct: 257 V-KVHEREINYLSFNPFNEWVLATASSDSTVALFDLRKLTAPLHVLSKHEGEVFQVEWDP 315
Query: 256 FGDGYCIMPMIGGNNSVYLANSFHDSG---------NSESRTTKLQ-----PTYVFK--G 299
N+ LA+S D E +L P +F G
Sbjct: 316 -------------NHETVLASSGEDRRLMVWDINRVGDEQLEIELDAEDGPPELLFSHGG 362
Query: 300 HTDRVTDFLWRSRHSQNTIIDDREFQLVTWSKDCDLRLWPVPDMVY 345
H +++DF W D + + + ++D L++W + + +Y
Sbjct: 363 HKAKISDFAWNK---------DEPWVISSVAEDNSLQVWQMAESIY 399
>At2g16780 [B] KOG0264 Nucleosome remodeling factor subunit CAF1/NURF55/MSI1
Length = 415
Score = 80.1 bits (196), Expect = 2e-14
Identities = 72/249 (28%), Positives = 118/249 (46%), Gaps = 36/249 (14%)
Query: 21 LRVDGGFNAVSINPSGRDVVLASRKGLYVVDLD-------------DPFSEPRWLHHLTS 67
+RVDG N P +V A G V D DP + R + H
Sbjct: 113 IRVDGEVNRARCMPQKPTLVGAKTSGCEVFLFDYAKHAAKSQTSECDP--DLRLVGH--D 168
Query: 68 WEVADVQWCPHPAKHHWVISTS-NQKAIVWNLSRSSSKAVEH---VLHGHFRAITDINFH 123
E + W P K +++S S +QK +W++S + V + V GH AI D+++H
Sbjct: 169 KEGYGLSWSPF--KEGYLLSGSQDQKICLWDVSATPQDKVLNAMFVYEGHESAIADVSWH 226
Query: 124 PLQPEILATSSIDTYALAWDMRSPK-----KPYFRTSNWRSGAAQVKWNHKNSNVLATSH 178
+ ++ D + WD R+ + K + R N+ S +N N VLAT+
Sbjct: 227 MKNENLFGSAGEDGRLVIWDTRTNQMQHQVKVHEREVNYLS------FNPFNEWVLATAS 280
Query: 179 SN-IVYVWDVRKGTSPLSVLEGHSGSVNSIDFNPFNETEIMSSGNDGTVKFWDYNKV-ED 236
S+ V ++D+RK +PL V+ H G V ++++P +ET + SSG D + WD N+V E+
Sbjct: 281 SDSTVALFDLRKLNAPLHVMSSHEGEVFQVEWDPNHETVLASSGEDRRLMVWDLNRVGEE 340
Query: 237 ELQMTITTE 245
+L++ + E
Sbjct: 341 QLEIELDAE 349
Score = 62.0 bits (149), Expect = 5e-09
Identities = 57/258 (22%), Positives = 103/258 (39%), Gaps = 45/258 (17%)
Query: 110 LHGHFRAITDINFHPLQPEILATSSIDTYALAWDMRSPKKP-----YFRTSNWRSGAAQV 164
L GH + +++ P + L + S D WD+ + + F S A V
Sbjct: 164 LVGHDKEGYGLSWSPFKEGYLLSGSQDQKICLWDVSATPQDKVLNAMFVYEGHESAIADV 223
Query: 165 KWNHKNSNVLATS-HSNIVYVWDVRKGTSPLSVLEGHSGSVNSIDFNPFNETEIMSSGND 223
W+ KN N+ ++ + +WD R V + H VN + FNPFNE + ++ +D
Sbjct: 224 SWHMKNENLFGSAGEDGRLVIWDTRTNQMQHQV-KVHEREVNYLSFNPFNEWVLATASSD 282
Query: 224 GTVKFWDYNKVEDELQMTITTEFPVWRGRYLPFGDGYCIMPMIGGNNSVYLANSFHDSG- 282
TV +D K+ L + + E V++ + P N+ LA+S D
Sbjct: 283 STVALFDLRKLNAPLHVMSSHEGEVFQVEWDP-------------NHETVLASSGEDRRL 329
Query: 283 --------NSESRTTKLQ-----PTYVFK--GHTDRVTDFLWRSRHSQNTIIDDREFQLV 327
E +L P +F GH +++DF W + + +
Sbjct: 330 MVWDLNRVGEEQLEIELDAEDGPPELLFSHGGHKAKISDFAWNK---------NEPWVIA 380
Query: 328 TWSKDCDLRLWPVPDMVY 345
+ ++D L++W + + +Y
Sbjct: 381 SVAEDNSLQVWQMAESIY 398
>Hs14149987 [S] KOG0269 WD40 repeat-containing protein
Length = 790
Score = 74.3 bits (181), Expect = 1e-12
Identities = 67/312 (21%), Positives = 129/312 (40%), Gaps = 22/312 (7%)
Query: 16 GKSLSLRVDGGFNAVSINPSGRDVVLASRK--GLYVVDLDDPFSEPRWLH----HLTSWE 69
G+++ +D NA+S+ VV+A R +Y ++ ++ F E L +
Sbjct: 18 GRTMHCHLDAPANAISVCRDAAQVVVAGRSIFKIYAIE-EEQFVEKLNLRVGRKPSLNLS 76
Query: 70 VADVQWCPHPAKHHWVISTSNQKAIV-WNLSRSSSKAVEHVLHGHFRAITDINFHPLQPE 128
ADV W H + + + + +V WNL R S + + H R + + FHP +
Sbjct: 77 CADVVW--HQMDENLLATAATNGVVVTWNLGRPSRNKQDQLFTEHKRTVNKVCFHPTEAH 134
Query: 129 ILATSSIDTYALAWDMRSPKKPYFRTSNWRSGAAQVKWNHKNSNVLATSHSN-IVYVWDV 187
+L + S D + +D+R K S V+++ ++ A++ N V +WD+
Sbjct: 135 VLLSGSQDGFMKCFDLRR-KDSVSTFSGQSESVRDVQFSIRDYFTFASTFENGNVQLWDI 193
Query: 188 RKGTSPLSVLEGHSGSVNSIDFNPFNETEIMSSGNDGTVKFWDYNKVEDELQMTITTEFP 247
R+ + H+G V D++P + + + G D VK WD + + T
Sbjct: 194 RRPDRCERMFTAHNGPVFCCDWHPEDRGWLATGGRDKMVKVWDMTTHRAKEMHCVQTIAS 253
Query: 248 VWRGRYLPFGDGYCIMPMIGGNNSVYLANSFHDSGNSESRTTKLQPTYVFKGHTDRVTDF 307
V R ++ P + + ++++Y+ + P +F+ H D T
Sbjct: 254 VARVKWRPECRHHLATCSMMVDHNIYVWDV----------RRPFVPAAMFEEHRDVTTGI 303
Query: 308 LWRSRHSQNTII 319
WR H + ++
Sbjct: 304 AWRHPHDPSFLL 315
>7301821 [S] KOG0269 WD40 repeat-containing protein
Length = 776
Score = 71.6 bits (174), Expect = 6e-12
Identities = 65/245 (26%), Positives = 109/245 (43%), Gaps = 13/245 (5%)
Query: 18 SLSLRVDGGFNAVSINPSGRDVVLASRKGLYVVDLD-DPFSEP---RWLHHLTSWEVADV 73
SL + ++G NA+++N + LA R L V ++ + F+E R + S+ DV
Sbjct: 12 SLRICLEGHANALALNKDNNQIALAGRSLLKVYSINSNGFTESCNMRGKNQNLSYSANDV 71
Query: 74 QWCPHPAKHHWVISTSNQKAIVWNLSRSSSKAVEHVLHGHFRAITDINFHPLQPEILATS 133
W + + + +N VW+LS+ + V + H R + FH +P IL +
Sbjct: 72 AWSTLDS-NLLATAATNGVVSVWDLSKFGRQKQLLVYNEHERTAHTVTFHSSEPNILISG 130
Query: 134 SIDTYALAWDMRSPK--KPYFRTSNWRSGAAQVKWNHKNSNVL-ATSHSNIVYVWDVRKG 190
S D +D+RS K YF S VK++ N+ A S + V +WD+RK
Sbjct: 131 SQDGTIKCFDIRSDKSINTYFCNS---ESVRDVKFSPHTQNIFSAVSENGTVQLWDMRKW 187
Query: 191 TSPLSVLEGHSGSVNSIDFNPFNETEIMSSGNDGTVKFWDYNKVEDELQMTITTEFPVWR 250
+ H G V + D++P + + D +K W+ + L+ TI T V R
Sbjct: 188 DKCMVQFTAHYGPVYTCDWHP-TRNWLATGSRDKQIKVWNMDG-RPGLEHTIHTIAVVGR 245
Query: 251 GRYLP 255
++ P
Sbjct: 246 VKWRP 250
>CE16234 [B] KOG0264 Nucleosome remodeling factor subunit CAF1/NURF55/MSI1
Length = 417
Score = 68.9 bits (167), Expect = 4e-11
Identities = 54/262 (20%), Positives = 116/262 (43%), Gaps = 26/262 (9%)
Query: 110 LHGHFRAITDINFHPLQPEILATSSIDTYALAWDMRSPK--------KPYFRTSNWRSGA 161
L GH + ++++P + ++ ++S D WD+ + + K F+ S
Sbjct: 168 LKGHTKEGYGLSWNPNKEGLILSASDDQTVCHWDINANQNVAGELQAKDVFK--GHESVV 225
Query: 162 AQVKWNHKNSNVLAT-SHSNIVYVWDVRKGTSPLSVLEGHSGSVNSIDFNPFNETEIMSS 220
V W+ + V + + +WDVR T P ++ HS VN + FNP++E + +
Sbjct: 226 EDVAWHVLHDGVFGSVGDDKKLLIWDVRTST-PGHCIDAHSAEVNCLAFNPYSEFILATG 284
Query: 221 GNDGTVKFWDYNKVEDELQMTITTEFPVWRGRYLPFGDGYCIMPMIGGNNSVY---LANS 277
D TV WD + +L + +++ ++ P + I+ G + ++ L+
Sbjct: 285 SADKTVALWDLRNLRMKLHSFESHRDEIFQVQWSPHNE--TILASSGTDKRLHVWDLSKI 342
Query: 278 FHDSGNSESRTTKLQPTYVFKGHTDRVTDFLWRSRHSQNTIIDDREFQLVTWSKDCDLRL 337
D ++ + ++ GHT +++DF W + + + + S+D L++
Sbjct: 343 GEDQSAEDAEDGPPELLFIHGGHTAKISDFSWN---------PNEPWVVCSVSEDNILQV 393
Query: 338 WPVPDMVYDKVHYECGKELPEK 359
W + D +Y++V E ++ E+
Sbjct: 394 WQMADNIYNEVDEETPADVVER 415
>Hs5032027 [B] KOG0264 Nucleosome remodeling factor subunit CAF1/NURF55/MSI1
Length = 425
Score = 68.2 bits (165), Expect = 7e-11
Identities = 46/173 (26%), Positives = 81/173 (46%), Gaps = 10/173 (5%)
Query: 73 VQWCPHPAKHHWVISTSNQKAI-VWNLSR--SSSKAVEH--VLHGHFRAITDINFHPLQP 127
+ W P+ + H ++S S+ I +W++S K V+ + GH + D+++H L
Sbjct: 183 LSWNPNLSGH--LLSASDDHTICLWDISAVPKEGKVVDAKTIFTGHTAVVEDVSWHLLHE 240
Query: 128 EILATSSIDTYALAWDMRS--PKKPYFRTSNWRSGAAQVKWNHKNSNVLAT-SHSNIVYV 184
+ + + D + WD RS KP + + +N + +LAT S V +
Sbjct: 241 SLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVAL 300
Query: 185 WDVRKGTSPLSVLEGHSGSVNSIDFNPFNETEIMSSGNDGTVKFWDYNKVEDE 237
WD+R L E H + + ++P NET + SSG D + WD +K+ +E
Sbjct: 301 WDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGEE 353
Score = 63.2 bits (152), Expect = 2e-09
Identities = 39/154 (25%), Positives = 70/154 (45%), Gaps = 14/154 (9%)
Query: 90 NQKAIVWNLSRSSSKAVEHVLHGHFRAITDINFHPLQPEILATSSIDTYALAWDMRSPKK 149
+QK ++W+ +++ H + H + ++F+P ILAT S D WD+R+ K
Sbjct: 249 DQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKL 308
Query: 150 PYFRTSNWRSGAAQVKWNHKNSNVLATSHSN-IVYVWDVRK---GTSP----------LS 195
+ + QV+W+ N +LA+S ++ + VWD+ K SP L
Sbjct: 309 KLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQSPEDAEDGPPELLF 368
Query: 196 VLEGHSGSVNSIDFNPFNETEIMSSGNDGTVKFW 229
+ GH+ ++ +NP I S D ++ W
Sbjct: 369 IHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVW 402
>YMR131c [R] KOG0302 Ribosome Assembly protein
Length = 511
Score = 67.0 bits (162), Expect = 2e-10
Identities = 39/132 (29%), Positives = 63/132 (47%), Gaps = 9/132 (6%)
Query: 115 RAITDINFHPLQPEILATSSIDTYALAWDMRSPK-KPYFRTSNWRSGAAQVKWNHKNSNV 173
++I DI + + + AT+ D Y WD RS K KP + + W+ K +
Sbjct: 322 KSIEDIQWSRTESTVFATAGCDGYIRIWDTRSKKHKPAISVKASNTDVNVISWSDKIGYL 381
Query: 174 LATSHSNIVY-VWDVRKGT-------SPLSVLEGHSGSVNSIDFNPFNETEIMSSGNDGT 225
LA+ N + VWD+R+ T P++ + H G++ SI FNP +E+ + D T
Sbjct: 382 LASGDDNGTWGVWDLRQFTPSNADAVQPVAQYDFHKGAITSIAFNPLDESIVAVGSEDNT 441
Query: 226 VKFWDYNKVEDE 237
V WD + D+
Sbjct: 442 VTLWDLSVEADD 453
>7290331 [R] KOG0266 WD40 repeat-containing protein
Length = 361
Score = 67.0 bits (162), Expect = 2e-10
Identities = 80/323 (24%), Positives = 136/323 (41%), Gaps = 53/323 (16%)
Query: 28 NAVSINPSGRDVVLASRKGLYVV--DLDDPFSEPRWLHHLTSWEVADVQWCPHPAKHHWV 85
+AV +P+G + +S L + D F + H L ++DV W + +
Sbjct: 76 SAVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLG---ISDVAWS---SDSRLL 129
Query: 86 ISTSNQKAI-VWNLSRSSSKAVEHVLHGHFRAITDINFHPLQPEILATSSIDTYALAWDM 144
+S S+ K + VW LS S L GH + NF+P Q ++ + S D WD+
Sbjct: 130 VSGSDDKTLKVWELSTGKSLKT---LKGHSNYVFCCNFNP-QSNLIVSGSFDESVRIWDV 185
Query: 145 RSPKKPYFRTSNWRSG-AAQVKWNHKNSNVLATSHSNIVYVWDVRKGTSPLSVLEGHSGS 203
R+ K +T S + V +N S ++++S+ + +WD G ++++ +
Sbjct: 186 RTGK--CLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPP 243
Query: 204 VNSIDFNPFNETEIMSSGNDGTVKFWDYNKVE--------DELQMTITTEFPVWRGRYLP 255
V+ + F+P N I+++ D T+K WDY+K + + I F V G+++
Sbjct: 244 VSFVKFSP-NGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIV 302
Query: 256 FGDGYCIMPMIGGNNSVYLANSFHDSGNSESRTTKLQPTYVFKGHTDRVTDFLWRSRHSQ 315
G +N VY+ N S+ KLQ GHTD V L + H
Sbjct: 303 SG---------SEDNMVYIWNL-----QSKEVVQKLQ------GHTDTV---LCTACHPT 339
Query: 316 NTIIDDREFQLVTWSKDCDLRLW 338
II + D ++LW
Sbjct: 340 ENIIASAALE-----NDKTIKLW 357
Score = 56.2 bits (134), Expect = 3e-07
Identities = 41/135 (30%), Positives = 67/135 (49%), Gaps = 6/135 (4%)
Query: 97 NLSRSSSKAVEHVLHGHFRAITDINFHPLQPEILATSSIDTYALAWDMRSPKKPYFRT-S 155
+LS + ++ L GH +A++ + F P E LA+SS D W K + +T S
Sbjct: 55 SLSVKPNYTLKFTLAGHTKAVSAVKFSP-NGEWLASSSADKLIKIWGAYDGK--FEKTIS 111
Query: 156 NWRSGAAQVKWNHKNSNVLATSHSNIVYVWDVRKGTSPLSVLEGHSGSVNSIDFNPFNET 215
+ G + V W+ + +++ S + VW++ G S L L+GHS V +FNP
Sbjct: 112 GHKLGISDVAWSSDSRLLVSGSDDKTLKVWELSTGKS-LKTLKGHSNYVFCCNFNP-QSN 169
Query: 216 EIMSSGNDGTVKFWD 230
I+S D +V+ WD
Sbjct: 170 LIVSGSFDESVRIWD 184
>7302218 [R] KOG0302 Ribosome Assembly protein
Length = 422
Score = 66.6 bits (161), Expect = 2e-10
Identities = 35/144 (24%), Positives = 71/144 (49%), Gaps = 6/144 (4%)
Query: 104 KAVEHVLHGHFRAITDINFHPLQPEILATSSIDTYALAWDMR-SPKKPYFRTSN--WRSG 160
K + L GH +++ D+ + P + +LA+ S+D WD R SP+K T +S
Sbjct: 225 KVDQRPLAGHSQSVEDLQWSPNERSVLASCSVDKTIRIWDCRASPQKACMLTCEDAHQSD 284
Query: 161 AAQVKWNHKNSNVLATSHSNIVYVWDVRKGTS--PLSVLEGHSGSVNSIDFNPFNETEIM 218
+ WN + + +++WD+R+ S P++ + H+ + +++++P T +
Sbjct: 285 VNVISWNRNEPFIASGGDDGYLHIWDLRQFQSKKPIATFKHHTDHITTVEWSPAEATVLA 344
Query: 219 SSGNDGTVKFWDYNKVEDELQMTI 242
S G+D + WD VE ++ +
Sbjct: 345 SGGDDDQIALWDL-AVEKDIDQAV 367
>7299974 [B] KOG0264 Nucleosome remodeling factor subunit CAF1/NURF55/MSI1
Length = 430
Score = 66.6 bits (161), Expect = 2e-10
Identities = 42/168 (25%), Positives = 75/168 (44%), Gaps = 19/168 (11%)
Query: 90 NQKAIVWNLSRSSSKAVEHVLHGHFRAITDINFHPLQPEILATSSIDTYALAWDMRSPKK 149
+QK ++W+ +++ H + H + ++F+P ILAT S D WD+R+ K
Sbjct: 253 DQKLMIWDTRNNNTSKPSHTVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKL 312
Query: 150 PYFRTSNWRSGAAQVKWNHKNSNVLATSHSN-IVYVWDVRK------------GTSPLSV 196
+ + QV+W+ N +LA+S ++ ++VWD+ K G L
Sbjct: 313 KLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLF 372
Query: 197 LE-GHSGSVNSIDFNPFNETEIMSSGNDGTVKFWD-----YNKVEDEL 238
+ GH+ ++ +NP I S D ++ W YN E E+
Sbjct: 373 IHGGHTAKISDFSWNPNEPWIICSVSEDNIMQVWQMAENVYNDEEPEI 420
Score = 64.3 bits (155), Expect = 1e-09
Identities = 40/168 (23%), Positives = 79/168 (46%), Gaps = 8/168 (4%)
Query: 78 HPAKHHWVISTSNQKAI-VWNLSRSSSKA----VEHVLHGHFRAITDINFHPLQPEILAT 132
+P + +++S S+ I +W+++ + + +++ GH + D+ +H L + +
Sbjct: 190 NPNLNGYLLSASDDHTICLWDINATPKEHRVIDAKNIFTGHTAVVEDVAWHLLHESLFGS 249
Query: 133 SSIDTYALAWDMR--SPKKPYFRTSNWRSGAAQVKWNHKNSNVLAT-SHSNIVYVWDVRK 189
+ D + WD R + KP + + +N + +LAT S V +WD+R
Sbjct: 250 VADDQKLMIWDTRNNNTSKPSHTVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRN 309
Query: 190 GTSPLSVLEGHSGSVNSIDFNPFNETEIMSSGNDGTVKFWDYNKVEDE 237
L E H + + ++P NET + SSG D + WD +K+ +E
Sbjct: 310 LKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEE 357
Score = 58.5 bits (140), Expect = 6e-08
Identities = 46/249 (18%), Positives = 110/249 (43%), Gaps = 23/249 (9%)
Query: 110 LHGHFRAITDINFHPLQPEILATSSIDTYALAWDMRSPKKPY--FRTSNWRSG----AAQ 163
L GH + ++++P L ++S D WD+ + K + N +G
Sbjct: 177 LRGHQKEGYGLSWNPNLNGYLLSASDDHTICLWDINATPKEHRVIDAKNIFTGHTAVVED 236
Query: 164 VKWNHKNSNVLAT-SHSNIVYVWDVRKGTS--PLSVLEGHSGSVNSIDFNPFNETEIMSS 220
V W+ + ++ + + + +WD R + P ++ H+ VN + FNP++E + +
Sbjct: 237 VAWHLLHESLFGSVADDQKLMIWDTRNNNTSKPSHTVDAHTAEVNCLSFNPYSEFILATG 296
Query: 221 GNDGTVKFWDYNKVEDELQMTITTEFPVWRGRYLPFGDGYCIMPMIGGNNSVY---LANS 277
D TV WD ++ +L + + +++ ++ P + I+ G + ++ L+
Sbjct: 297 SADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNE--TILASSGTDRRLHVWDLSKI 354
Query: 278 FHDSGNSESRTTKLQPTYVFKGHTDRVTDFLWRSRHSQNTIIDDREFQLVTWSKDCDLRL 337
+ ++ + ++ GHT +++DF W + + + + S+D +++
Sbjct: 355 GEEQSTEDAEDGPPELLFIHGGHTAKISDFSWN---------PNEPWIICSVSEDNIMQV 405
Query: 338 WPVPDMVYD 346
W + + VY+
Sbjct: 406 WQMAENVYN 414
>SPAC29A4.18 [B] KOG0264 Nucleosome remodeling factor subunit CAF1/NURF55/MSI1
Length = 431
Score = 66.2 bits (160), Expect = 3e-10
Identities = 46/147 (31%), Positives = 72/147 (48%), Gaps = 7/147 (4%)
Query: 96 WNLSRSSSKAVEHVLHGHFRAITDINFHPLQPEILATSSIDTYALAWDMRSPK---KPYF 152
+N S S+S H+ H + ++D+ FH ++LA+ S D Y D+R P KP
Sbjct: 217 YNESDSASVLKVHI-SSHEKQVSDVRFHYKHQDLLASVSYDQYLHVHDIRRPDASTKPA- 274
Query: 153 RTSNWRSGAAQ-VKWNHKNSNVLAT-SHSNIVYVWDVRKGTSPLSVLEGHSGSVNSIDFN 210
R+ + SG V +N N +LAT S + +WD+R L LEGH V I F+
Sbjct: 275 RSVHAHSGPIHSVAFNPHNDFILATCSTDKTIALWDLRNLNQRLHTLEGHEDIVTKISFS 334
Query: 211 PFNETEIMSSGNDGTVKFWDYNKVEDE 237
P E + S+ D WD +++ ++
Sbjct: 335 PHEEPILASTSADRRTLVWDLSRIGED 361
Score = 57.8 bits (138), Expect = 1e-07
Identities = 53/263 (20%), Positives = 108/263 (40%), Gaps = 13/263 (4%)
Query: 82 HHWVISTSNQKAIVWNLSRSSSKAVEHVLHGHFRAITDINFHPLQPEILATSSIDTYALA 141
H+ V+ + ++ + S ++ L H + T + ++ L L + S D
Sbjct: 152 HNDVLVFDKESFESYSSASESPLKPKYRLTKHTQPCTSVCWNFLSKGTLVSGSQDATLSC 211
Query: 142 WDMRSPKKP------YFRTSNWRSGAAQVKWNHKNSNVLAT-SHSNIVYVWDVRK---GT 191
WD+ + + S+ + V++++K+ ++LA+ S+ ++V D+R+ T
Sbjct: 212 WDLNAYNESDSASVLKVHISSHEKQVSDVRFHYKHQDLLASVSYDQYLHVHDIRRPDAST 271
Query: 192 SPLSVLEGHSGSVNSIDFNPFNETEIMSSGNDGTVKFWDYNKVEDELQMTITTEFPVWRG 251
P + HSG ++S+ FNP N+ + + D T+ WD + L E V +
Sbjct: 272 KPARSVHAHSGPIHSVAFNPHNDFILATCSTDKTIALWDLRNLNQRLHTLEGHEDIVTKI 331
Query: 252 RYLPFGDGYCIMPMIGGNNSVY-LANSFHDSGNSESRTTKLQPTYVFKGHTDRVTDFLWR 310
+ P + V+ L+ D E++ + ++ GHT D W
Sbjct: 332 SFSPHEEPILASTSADRRTLVWDLSRIGEDQPAEEAQDGPPELLFMHGGHTSCTIDMDWC 391
Query: 311 SRH--SQNTIIDDREFQLVTWSK 331
+ + T +D Q+ T S+
Sbjct: 392 PNYNWTMATAAEDNILQIWTPSR 414
>At2g19520 [B] KOG0264 Nucleosome remodeling factor subunit CAF1/NURF55/MSI1
Length = 507
Score = 66.2 bits (160), Expect = 3e-10
Identities = 57/253 (22%), Positives = 91/253 (35%), Gaps = 72/253 (28%)
Query: 109 VLHGHFRAITDINFHPLQPEILATSSIDTYALAWDMRSPKKPYFRTSNWRSGAAQ-VKWN 167
V HGH + D+ F P + + D+ + WD R+ P + V WN
Sbjct: 287 VYHGHEDTVEDVAFSPTSAQEFCSVGDDSCLILWDARTGTNPVTKVEKAHDADLHCVDWN 346
Query: 168 HKNSNVLAT-SHSNIVYVWDVRKGT-----SPLSVLEGHSGSVNSIDFNPFNETEIMSSG 221
+ N++ T S N V ++D RK T SP+ EGH +V + ++P + SS
Sbjct: 347 PHDDNLILTGSADNTVRLFDRRKLTANGVGSPIYKFEGHKAAVLCVQWSPDKSSVFGSSA 406
Query: 222 NDGTVKFWDYNKVEDELQMTITTEFPVWRGRYLPFGDGYCIMPMIGGNNSVYLANSFHDS 281
DG + WDY++V
Sbjct: 407 EDGLLNIWDYDRV----------------------------------------------- 419
Query: 282 GNSESRTTKLQPTYVFK--GHTDRVTDFLWRSRHSQNTIIDDREFQLVTWSKDCD----- 334
R K F+ GH D+V DF W + + +V+ S DC+
Sbjct: 420 SKKSDRAAKSPAGLFFQHAGHRDKVVDFHWNA---------SDPWTIVSVSDDCETTGGG 470
Query: 335 --LRLWPVPDMVY 345
L++W + D++Y
Sbjct: 471 GTLQIWRMSDLIY 483
>At5g08390 [D] KOG0267 Microtubule severing protein katanin p80 subunit B
(contains WD40 repeats)
Length = 823
Score = 65.5 bits (158), Expect = 5e-10
Identities = 44/142 (30%), Positives = 67/142 (46%), Gaps = 9/142 (6%)
Query: 95 VWNLSRSSSKAVEHVLHGHFRAITDINFHPLQPEILATSSIDTYALAWDMRSPKKPYFRT 154
+W+L + V L GH +NFHP E A+ S+DT WD+R KK T
Sbjct: 178 LWDLEEAK---VVRTLTGHRSNCVSVNFHPFG-EFFASGSLDTNLKIWDIR--KKGCIHT 231
Query: 155 SNWRS-GAAQVKWNHKNSNVLATSHSNIVYVWDVRKGTSPLSVLEGHSGSVNSIDFNPFN 213
+ G +++ +++ N+V VWD+ G L + H G + S+DF+P +
Sbjct: 232 YKGHTRGVNVLRFTPDGRWIVSGGEDNVVKVWDLTAGKL-LHEFKSHEGKIQSLDFHP-H 289
Query: 214 ETEIMSSGNDGTVKFWDYNKVE 235
E + + D TVKFWD E
Sbjct: 290 EFLLATGSADKTVKFWDLETFE 311
>ECU07g0750 [B] KOG0264 Nucleosome remodeling factor subunit CAF1/NURF55/MSI1
Length = 384
Score = 64.7 bits (156), Expect = 8e-10
Identities = 44/148 (29%), Positives = 69/148 (45%), Gaps = 1/148 (0%)
Query: 101 SSSKAVEHVLHGHFRAITDINFHPLQPEILATSSIDTYALAWDMRSPKKPYFRTSNWRSG 160
SSS + VL H A+ D F ++L+++ + WD RS + S
Sbjct: 192 SSSISPTVVLRRHETAVNDCAFSFFDKKLLSSAGDGGMVVLWDTRSEDCIHAIEEAHTSD 251
Query: 161 AAQVKWNHKNSNVLATSHSN-IVYVWDVRKGTSPLSVLEGHSGSVNSIDFNPFNETEIMS 219
V+++ + NV+ATS + V VWD R + PL +L GHS V S++++P N+ + S
Sbjct: 252 ILSVRFSPLDGNVIATSSCDGSVKVWDRRSLSQPLHILLGHSKDVVSVEWSPHNDKVLAS 311
Query: 220 SGNDGTVKFWDYNKVEDELQMTITTEFP 247
D V WD + E+ E P
Sbjct: 312 GSTDRRVIVWDLGQAGAEVPEEYKAEGP 339
Score = 60.5 bits (145), Expect = 1e-08
Identities = 43/165 (26%), Positives = 66/165 (39%), Gaps = 14/165 (8%)
Query: 85 VISTSNQKAIVWNLSRSSSKAVEHVLHGHFRAITDINFHPLQPEILATSSIDTYALAWDM 144
++S++ +V S + + H I + F PL ++ATSS D WD
Sbjct: 220 LLSSAGDGGMVVLWDTRSEDCIHAIEEAHTSDILSVRFSPLDGNVIATSSCDGSVKVWDR 279
Query: 145 RSPKKPYFRTSNWRSGAAQVKWNHKNSNVLAT-SHSNIVYVWDV------------RKGT 191
RS +P V+W+ N VLA+ S V VWD+ +G
Sbjct: 280 RSLSQPLHILLGHSKDVVSVEWSPHNDKVLASGSTDRRVIVWDLGQAGAEVPEEYKAEGP 339
Query: 192 SPLSVLE-GHSGSVNSIDFNPFNETEIMSSGNDGTVKFWDYNKVE 235
+ L GH+ +V I +NP EI S D ++ W + E
Sbjct: 340 PEMKFLHGGHTSTVCDISWNPAEPFEIASVSEDNILQIWQMPQPE 384
>YPL247c [S] KOG0290 Conserved WD40 repeat-containing protein AN11
Length = 523
Score = 64.3 bits (155), Expect = 1e-09
Identities = 65/247 (26%), Positives = 106/247 (42%), Gaps = 25/247 (10%)
Query: 85 VISTSNQKAIVWNLSRSSSKAVEHVLHGHFRAITDINFHPLQPEILATSSIDTYALAWDM 144
+ S+ + IVW+L SS V+ L H + D+ F ++ A+ D +D+
Sbjct: 260 ISSSIDTTCIVWDLQ--SSHYVKTQLIAHDSEVFDVRFLTKSTQLFASCGGDGSVRVFDL 317
Query: 145 RSPKKP---YFRTSNWRSGAA---------------QVKWNHKNSNVLAT--SHSNIVYV 184
RS Y S+ SGA +++ + + NVLAT + SN + +
Sbjct: 318 RSLAHSTIIYEPPSSSVSGATAGTITPSSKGSDALLRLEPSPYDPNVLATFAADSNKIII 377
Query: 185 WDVRKGTSPLSVLEGHSGSVNSIDFNPFNETEIMSSGNDGTVKFWDYNKVEDELQMTITT 244
D+R SP+ L+GH SVN I ++P ++S G+D V +WD N E+ +
Sbjct: 378 LDMRNPESPILNLQGHGSSVNGIKWHPTKRNVLLSCGDDCQVLYWDLNSSFMEIN-AAGS 436
Query: 245 EFPVWRGRYLPFGDGYCIMPMIGGNNSVYLANSFHDSGNSESRTTKLQ-PTYVFKGHTDR 303
+ P G L DG M GG S + + NS+ L+ P ++ T
Sbjct: 437 KSPSIHGTSLEDPDGDTEM-TDGGAGSGLNEDPLSLNNNSKQVCKTLETPNMMYANKTQE 495
Query: 304 VTDFLWR 310
+ + WR
Sbjct: 496 INNIAWR 502
>Hs4506439 [B] KOG0264 Nucleosome remodeling factor subunit CAF1/NURF55/MSI1
Length = 425
Score = 64.3 bits (155), Expect = 1e-09
Identities = 38/162 (23%), Positives = 72/162 (43%), Gaps = 7/162 (4%)
Query: 83 HWVISTSNQKAIVWNLSRSSSKA----VEHVLHGHFRAITDINFHPLQPEILATSSIDTY 138
H + ++ + +W+++ + + + GH + D+ +H L + + + D
Sbjct: 191 HLLSASDDHTVCLWDINAGPKEGKIVDAKAIFTGHSAVVEDVAWHLLHESLFGSVADDQK 250
Query: 139 ALAWDMRS--PKKPYFRTSNWRSGAAQVKWNHKNSNVLAT-SHSNIVYVWDVRKGTSPLS 195
+ WD RS KP + + +N + +LAT S V +WD+R L
Sbjct: 251 LMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLH 310
Query: 196 VLEGHSGSVNSIDFNPFNETEIMSSGNDGTVKFWDYNKVEDE 237
E H + + ++P NET + SSG D + WD +K+ +E
Sbjct: 311 TFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKIGEE 352
Score = 64.3 bits (155), Expect = 1e-09
Identities = 43/172 (25%), Positives = 75/172 (43%), Gaps = 16/172 (9%)
Query: 90 NQKAIVWNLSRSSSKAVEHVLHGHFRAITDINFHPLQPEILATSSIDTYALAWDMRSPKK 149
+QK ++W+ +++ H++ H + ++F+P ILAT S D WD+R+ K
Sbjct: 248 DQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKL 307
Query: 150 PYFRTSNWRSGAAQVKWNHKNSNVLATSHSN-IVYVWDVRK------------GTSPLSV 196
+ + QV W+ N +LA+S ++ + VWD+ K G L
Sbjct: 308 KLHTFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKIGEEQSAEDAEDGPPELLF 367
Query: 197 LE-GHSGSVNSIDFNPFNETEIMSSGNDGTVKFWDY--NKVEDELQMTITTE 245
+ GH+ ++ +NP I S D ++ W N DE T+E
Sbjct: 368 IHGGHTAKISDFSWNPNEPWVICSVSEDNIMQIWQMAENIYNDEESDVTTSE 419
>CE11860 [B] KOG0264 Nucleosome remodeling factor subunit CAF1/NURF55/MSI1
Length = 412
Score = 64.3 bits (155), Expect = 1e-09
Identities = 47/169 (27%), Positives = 74/169 (42%), Gaps = 21/169 (12%)
Query: 80 AKHHWVIST--SNQKAIVWNLSRSSSKAVEHVLHGHFRAITDINFHPLQPEILATSSIDT 137
A H++V + ++K +W+L +S + GH + I F+P ILAT S+D
Sbjct: 231 ALHNFVFGSVGDDRKLNLWDLRQSKPQLTAV---GHTAEVNCITFNPFSEYILATGSVDK 287
Query: 138 YALAWDMRSPKKPYFRTSNWRSGAAQVKWNHKNSNVLATSHSNI-VYVWDVRKGTSPLS- 195
WDMR+ +K + + QV ++ VLA+S S+ V VWD+ K P S
Sbjct: 288 TVALWDMRNMRKKMYTLKHHNDEIFQVSFSPHYETVLASSGSDDRVIVWDISKIQDPSSS 347
Query: 196 --------------VLEGHSGSVNSIDFNPFNETEIMSSGNDGTVKFWD 230
+ GH+G V +NP I SS ++ W+
Sbjct: 348 SAASSDSVPPEVIFIHAGHTGKVADFSWNPNRPWTICSSDEFNALQVWE 396
Score = 63.9 bits (154), Expect = 1e-09
Identities = 55/250 (22%), Positives = 87/250 (34%), Gaps = 55/250 (22%)
Query: 83 HWVISTSNQKAIVWNLSRSSSKAVEHVLHGHFRAITDINFHPLQPEILATSSIDTYALAW 142
HW I+ N + S + GH D++FH L + + D W
Sbjct: 198 HWDINA--------NQTISGQIVPQSKFKGHSSNAEDVSFHALHNFVFGSVGDDRKLNLW 249
Query: 143 DMRSPKKPYFRTSNWRSGAAQVKWNHKNSNVLAT-SHSNIVYVWDVRKGTSPLSVLEGHS 201
D+R KP + + +N + +LAT S V +WD+R + L+ H+
Sbjct: 250 DLRQ-SKPQLTAVGHTAEVNCITFNPFSEYILATGSVDKTVALWDMRNMRKKMYTLKHHN 308
Query: 202 GSVNSIDFNPFNETEIMSSGNDGTVKFWDYNKVEDELQMTITTEFPVWRGRYLPFGDGYC 261
+ + F+P ET + SSG+D V WD +K++D
Sbjct: 309 DEIFQVSFSPHYETVLASSGSDDRVIVWDISKIQD------------------------- 343
Query: 262 IMPMIGGNNSVYLANSFHDSGNSESRTTKLQPTYVF--KGHTDRVTDFLWRSRHSQNTII 319
S +S + + + P +F GHT +V DF W
Sbjct: 344 ------------------PSSSSAASSDSVPPEVIFIHAGHTGKVADFSWNPNRPWTICS 385
Query: 320 DDREFQLVTW 329
D L W
Sbjct: 386 SDEFNALQVW 395
>At5g23430 [D] KOG0267 Microtubule severing protein katanin p80 subunit B
(contains WD40 repeats)
Length = 922
Score = 64.3 bits (155), Expect = 1e-09
Identities = 44/142 (30%), Positives = 68/142 (46%), Gaps = 9/142 (6%)
Query: 95 VWNLSRSSSKAVEHVLHGHFRAITDINFHPLQPEILATSSIDTYALAWDMRSPKKPYFRT 154
+W+L + + L GH ++FHP E A+ S+DT WD+R KK T
Sbjct: 85 LWDLEEAK---IVRTLTGHRSNCISVDFHPFG-EFFASGSLDTNLKIWDIR--KKGCIHT 138
Query: 155 SNWRS-GAAQVKWNHKNSNVLATSHSNIVYVWDVRKGTSPLSVLEGHSGSVNSIDFNPFN 213
+ G +++ V++ NIV VWD+ G L+ + H G + S+DF+P +
Sbjct: 139 YKGHTRGVNVLRFTPDGRWVVSGGEDNIVKVWDLTAGKL-LTEFKSHEGQIQSLDFHP-H 196
Query: 214 ETEIMSSGNDGTVKFWDYNKVE 235
E + + D TVKFWD E
Sbjct: 197 EFLLATGSADRTVKFWDLETFE 218
>At1g29260 [U] KOG0277 Peroxisomal targeting signal type 2 receptor
Length = 317
Score = 64.3 bits (155), Expect = 1e-09
Identities = 49/171 (28%), Positives = 76/171 (43%), Gaps = 7/171 (4%)
Query: 69 EVADVQWCPHPAKHHWVISTSNQKAIVWNLSRSSSKAVEHVLHGHFRAITDINFHPLQPE 128
EV V + P + ++ S+ + +W + R +S H + ++P +
Sbjct: 108 EVQSVDYNP-TRRDSFLTSSWDDTVKLWAMDRPASV---RTFKEHAYCVYQAVWNPKHGD 163
Query: 129 ILATSSIDTYALAWDMRSPKKPYFRTSNWRSGAAQVKWNHKNSNVLATSH-SNIVYVWDV 187
+ A++S D WD+R P ++ WN + +LATS V VWDV
Sbjct: 164 VFASASGDCTLRIWDVREPGSTMIIPAH-DFEILSCDWNKYDDCILATSSVDKTVKVWDV 222
Query: 188 RKGTSPLSVLEGHSGSVNSIDFNPFNETEIMSSGNDGTVKFWDYNKVEDEL 238
R PL+VL GH +V + F+P + I S D +V WDY VED L
Sbjct: 223 RSYRVPLAVLNGHGYAVRKVKFSPHRRSLIASCSYDMSVCLWDY-MVEDAL 272
Score = 55.1 bits (131), Expect = 6e-07
Identities = 34/120 (28%), Positives = 60/120 (49%), Gaps = 5/120 (4%)
Query: 113 HFRAITDINFHPLQPEILATSSIDTYALAWDMRSPKKPYFRTSNWRSGAA-QVKWNHKNS 171
H R + ++++P + + TSS D W M P RT + Q WN K+
Sbjct: 105 HAREVQSVDYNPTRRDSFLTSSWDDTVKLWAMDRPAS--VRTFKEHAYCVYQAVWNPKHG 162
Query: 172 NVLATSHSN-IVYVWDVRKGTSPLSVLEGHSGSVNSIDFNPFNETEIMSSGNDGTVKFWD 230
+V A++ + + +WDVR+ S + ++ H + S D+N +++ + +S D TVK WD
Sbjct: 163 DVFASASGDCTLRIWDVREPGSTM-IIPAHDFEILSCDWNKYDDCILATSSVDKTVKVWD 221
>Hs5031817 [D] KOG0267 Microtubule severing protein katanin p80 subunit B
(contains WD40 repeats)
Length = 655
Score = 63.9 bits (154), Expect = 1e-09
Identities = 42/141 (29%), Positives = 70/141 (48%), Gaps = 7/141 (4%)
Query: 95 VWNLSRSSSKAVEHVLHGHFRAITDINFHPLQPEILATSSIDTYALAWDMRSPKKPYFRT 154
VW+L + + L G I ++FHP E +A+ S DT WD+R K FR
Sbjct: 89 VWDLEAAK---ILRTLMGLKANICSLDFHPYG-EFVASGSQDTNIKLWDIRR-KGCVFRY 143
Query: 155 SNWRSGAAQVKWNHKNSNVLATSHSNIVYVWDVRKGTSPLSVLEGHSGSVNSIDFNPFNE 214
++++ + + + + V +WD+ G +S GH+G VN ++F+P NE
Sbjct: 144 RGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKM-MSEFPGHTGPVNVVEFHP-NE 201
Query: 215 TEIMSSGNDGTVKFWDYNKVE 235
+ S +DGT++FWD K +
Sbjct: 202 YLLASGSSDGTIRFWDLEKFQ 222
>7296695 [A] KOG0284 Polyadenylation factor I complex subunit PFS2
Length = 439
Score = 63.9 bits (154), Expect = 1e-09
Identities = 42/186 (22%), Positives = 85/186 (45%), Gaps = 7/186 (3%)
Query: 79 PAKHHWVISTSNQKAIVWNLSRSSSKAVEHVLHGHFRAITDINFHPLQPEILATSSIDTY 138
P +V + + +W+ R E VL GH + +++HP + I++ S +
Sbjct: 239 PTDSKFVSGSDDGTLRIWDFMRCQE---ERVLRGHGADVKCVHWHPQKGMIVSGSKDNQQ 295
Query: 139 ALA-WDMRSPKKPYFRTSNWRSGAAQVKWNHKNSNVLATSHSNIVYVWDVRKGTSPLSVL 197
+ WD +S ++ +S +KWN + ++ S +++ ++D+R + V
Sbjct: 296 PIKIWDPKSGIALATLHAH-KSTVMDLKWNDNGNWLVTASRDHLLKLFDIRNLREEVQVF 354
Query: 198 EGHSGSVNSIDFNPFNETEIMSSGNDGTVKFWDYNKVEDELQMTITT--EFPVWRGRYLP 255
GH +S+ ++P +E S G+DG++ FW+ + D+ + T + VW + P
Sbjct: 355 RGHKKEASSVSWHPIHEGLFCSGGSDGSILFWNVGRSTDKEIGCVETAHDSIVWTLAWHP 414
Query: 256 FGDGYC 261
G C
Sbjct: 415 LGHILC 420
>Hs16554627 [R] KOG0266 WD40 repeat-containing protein
Length = 334
Score = 63.5 bits (153), Expect = 2e-09
Identities = 68/280 (24%), Positives = 126/280 (44%), Gaps = 51/280 (18%)
Query: 70 VADVQWCPHPAKHHWVISTSNQKAI-VWNLSRSSSKAVEHVLHGHFRAITDINFHPLQPE 128
++DV W + + ++S S+ K + +W++S S K ++ L GH + NF+P Q
Sbjct: 90 ISDVAWS---SDSNLLVSASDDKTLKIWDVS--SGKCLK-TLKGHSNYVFCCNFNP-QSN 142
Query: 129 ILATSSIDTYALAWDMRSPKKPYFRTSNWRSG-AAQVKWNHKNSNVLATSHSNIVYVWDV 187
++ + S D WD+++ K +T S + V +N S ++++S+ + +WD
Sbjct: 143 LIVSGSFDESVRIWDVKTGK--CLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDT 200
Query: 188 RKGTSPLSVLEGHSGSVNSIDFNPFNETEIMSSGNDGTVKFWDYNKVE--------DELQ 239
G ++++ + V+ + F+P N I+++ D T+K WDY+K + +
Sbjct: 201 ASGQCLKTLIDDDNPPVSFVKFSP-NGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEK 259
Query: 240 MTITTEFPVWRGRYLPFGDGYCIMPMIGGNNSVYLANSFHDSGNSESRTTKLQPTYVFKG 299
I F V G+++ G +N VY+ N ++ KLQ G
Sbjct: 260 YCIFANFSVTGGKWIVSG---------SEDNLVYIWNL-----QTKEIVQKLQ------G 299
Query: 300 HTDRVTDFLWRSRHSQNTII------DDREFQLVTWSKDC 333
HTD V + + H II +D+ +L W DC
Sbjct: 300 HTDVV---ISTACHPTENIIASAALENDKTIKL--WKSDC 334
Score = 59.3 bits (142), Expect = 3e-08
Identities = 40/127 (31%), Positives = 64/127 (49%), Gaps = 6/127 (4%)
Query: 105 AVEHVLHGHFRAITDINFHPLQPEILATSSIDTYALAWDMRSPKKPYFRT-SNWRSGAAQ 163
A++ L GH +A++ + F P E LA+SS D W K + +T S + G +
Sbjct: 36 ALKFTLAGHTKAVSSVKFSP-NGEWLASSSADKLIKIWGAYDGK--FEKTISGHKLGISD 92
Query: 164 VKWNHKNSNVLATSHSNIVYVWDVRKGTSPLSVLEGHSGSVNSIDFNPFNETEIMSSGND 223
V W+ ++ +++ S + +WDV G L L+GHS V +FNP I+S D
Sbjct: 93 VAWSSDSNLLVSASDDKTLKIWDVSSGKC-LKTLKGHSNYVFCCNFNP-QSNLIVSGSFD 150
Query: 224 GTVKFWD 230
+V+ WD
Sbjct: 151 ESVRIWD 157
>Hs22048320 [B] KOG0264 Nucleosome remodeling factor subunit CAF1/NURF55/MSI1
Length = 345
Score = 62.4 bits (150), Expect = 4e-09
Identities = 41/172 (23%), Positives = 77/172 (43%), Gaps = 9/172 (5%)
Query: 73 VQWCPHPAKHHWVISTSNQKAI-VWNLS---RSSSKAVEHVLHGHFRAITDINFHPLQPE 128
+ W P+ + H ++S S+ + +W++S + + GH + D+ ++ L
Sbjct: 98 LSWNPNLSGH--LLSASDDHTVCLWDISAIPKEGKVDARTIFTGHTAVVEDVFWNLLHES 155
Query: 129 ILATSSIDTYALAWDMRSPK--KPYFRTSNWRSGAAQVKWNHKNSNVLAT-SHSNIVYVW 185
+ + D + WD RS KP + + + +N +LAT S V +W
Sbjct: 156 LFRLVADDQKLMIWDTRSKNTSKPSHSVDAYTAEVNCLSFNPYGEFILATGSADKTVALW 215
Query: 186 DVRKGTSPLSVLEGHSGSVNSIDFNPFNETEIMSSGNDGTVKFWDYNKVEDE 237
D+R + E H + + ++P NET + SSG D + WD +K+ +E
Sbjct: 216 DLRNLKLKVHSFESHKDEIFQVQWSPHNETILASSGTDHGLNVWDLSKITEE 267
Score = 58.5 bits (140), Expect = 6e-08
Identities = 38/153 (24%), Positives = 68/153 (43%), Gaps = 13/153 (8%)
Query: 90 NQKAIVWNLSRSSSKAVEHVLHGHFRAITDINFHPLQPEILATSSIDTYALAWDMRSPKK 149
+QK ++W+ ++ H + + + ++F+P ILAT S D WD+R+ K
Sbjct: 163 DQKLMIWDTRSKNTSKPSHSVDAYTAEVNCLSFNPYGEFILATGSADKTVALWDLRNLKL 222
Query: 150 PYFRTSNWRSGAAQVKWNHKNSNVLATSHSNI-VYVWDVRKGT---SP---------LSV 196
+ + QV+W+ N +LA+S ++ + VWD+ K T SP L +
Sbjct: 223 KVHSFESHKDEIFQVQWSPHNETILASSGTDHGLNVWDLSKITEEQSPEDAEDRPPELFI 282
Query: 197 LEGHSGSVNSIDFNPFNETEIMSSGNDGTVKFW 229
GH+ + NP I S + ++ W
Sbjct: 283 HGGHTAKIPDFSLNPSEPWMICSVSENNIMEVW 315
>7292737 [A] KOG0285 Pleiotropic regulator 1
Length = 482
Score = 62.4 bits (150), Expect = 4e-09
Identities = 46/161 (28%), Positives = 75/161 (46%), Gaps = 9/161 (5%)
Query: 70 VADVQWCPHPAKHHWVISTSNQKAI-VWNLSRSSSKAVEHVLHGHFRAITDINFHPLQPE 128
V+ V+ KH ++ S + + W+L + K + H HGH A+ + HP +
Sbjct: 214 VSTVRGVAVSTKHPYLFSCGEDRQVKCWDLEYN--KVIRHY-HGHLSAVYSLALHPTI-D 269
Query: 129 ILATSSIDTYALAWDMRSPKKPYFRTSNWRSGAAQVKWNHKNSNVLATSHSNIVYVWDVR 188
+LATS D+ A WDMR+ + T + + A V N ++ SH + V +WD+
Sbjct: 270 VLATSGRDSTARIWDMRTKANVHTLTGHTNT-VASVVAQATNPQIITGSHDSTVRLWDLA 328
Query: 189 KGTSPLSVLEGHSGSVNSIDFNPFNETEIMSSGNDGTVKFW 229
G S + L H SV SI +P + +S + +K W
Sbjct: 329 AGKS-VCTLTNHKKSVRSIVLHP--SLYMFASASPDNIKQW 366
>SPCC1672.10 [B] KOG0264 Nucleosome remodeling factor subunit CAF1/NURF55/MSI1
Length = 430
Score = 61.6 bits (148), Expect = 7e-09
Identities = 43/146 (29%), Positives = 70/146 (47%), Gaps = 5/146 (3%)
Query: 97 NLSRSSSKAVEHVL--HGHFRAITDINFHPLQPEILATSSIDTYALAWDMR-SPKKPYFR 153
+ + S +K + + H H + D+ FHP +LA+ S D D R +P++ +
Sbjct: 216 SFTSSETKVISPIAKYHRHTDIVNDVQFHPQHEALLASVSDDCTLQIHDTRLNPEEEAPK 275
Query: 154 TSNWRSGAAQ-VKWNHKNSNVLATSHSN-IVYVWDVRKGTSPLSVLEGHSGSVNSIDFNP 211
S A V N N +LAT+ ++ V +WD+R L LEGH V ++++P
Sbjct: 276 VIQAHSKAINAVAINPFNDYLLATASADKTVALWDLRNPYQRLHTLEGHEDEVYGLEWSP 335
Query: 212 FNETEIMSSGNDGTVKFWDYNKVEDE 237
+E + SS D V WD K+ +E
Sbjct: 336 HDEPILASSSTDRRVCIWDLEKIGEE 361
>CE27292 [R] KOG0302 Ribosome Assembly protein
Length = 453
Score = 61.2 bits (147), Expect = 9e-09
Identities = 36/146 (24%), Positives = 68/146 (45%), Gaps = 6/146 (4%)
Query: 91 QKAIVWNLSRSSSKAV-EHVLHGHFRAITDINFHPLQPEILATSSIDTYALAWDMRS-PK 148
+K +W + AV + L GH +++ D+ + P + +LA+ S D WD RS PK
Sbjct: 251 KKIYLWQMKEGGQWAVGANPLTGHKKSVEDLAWSPTETGLLASCSADGSIKLWDTRSAPK 310
Query: 149 KPYFRTSN--WRSGAAQVKWNHKNSNVLATSHSNIVYVWDVR--KGTSPLSVLEGHSGSV 204
T S + WN + +++ + +W ++ + P+++ + H+ +
Sbjct: 311 DACVCTVQKAHESDVNVISWNRHENLIVSGGDDGELKIWSLKTIQFGQPVALFKYHNSPI 370
Query: 205 NSIDFNPFNETEIMSSGNDGTVKFWD 230
S+D++P T M+SG D WD
Sbjct: 371 TSVDWHPHETTTFMASGEDDQTTIWD 396
>7296245 [A] KOG0265 U5 snRNP-specific protein-like factor and related
proteins
Length = 347
Score = 61.2 bits (147), Expect = 9e-09
Identities = 42/140 (30%), Positives = 70/140 (50%), Gaps = 15/140 (10%)
Query: 95 VWNLSRSSSKAVEHVLHGHFRAITDINFHPLQPEILATSSIDTYALAWDMRSPKKPYFRT 154
+W++ + +AV H L GH IT ++ P + + + T+++D WD+R P P R
Sbjct: 208 IWDIRK---QAVLHHLRGHSDTITGMSLSP-EGDFILTNAMDNTLRVWDVR-PYAPGERC 262
Query: 155 --------SNWRSGAAQVKWNHKNSNVLATSHSNIVYVWDVRKGTSPLSVLEGHSGSVNS 206
N+ + W+ + + + S VY+WDV L L GH+GSVN+
Sbjct: 263 VKVFQGHQHNFEKNLLRCAWSPGSDKITSGSADRHVYIWDVNTRRI-LYKLPGHNGSVNA 321
Query: 207 IDFNPFNETEIMSSGNDGTV 226
+DF+P E I+S +D T+
Sbjct: 322 VDFSP-KEPLILSGSSDKTL 340
>Hs9506645 [R] KOG0266 WD40 repeat-containing protein
Length = 330
Score = 60.8 bits (146), Expect = 1e-08
Identities = 48/210 (22%), Positives = 106/210 (49%), Gaps = 17/210 (8%)
Query: 28 NAVSINPSGRDVVLASRKGLYVV--DLDDPFSEPRWLHHLTSWEVADVQWCPHPAKHHWV 85
++V +P+G + +S L ++ D + + + H+L E++DV W ++ +
Sbjct: 45 SSVKFSPNGEWLASSSADRLIIIWGAYDGKYEKTLYGHNL---EISDVAWSSDSSR---L 98
Query: 86 ISTSNQKAI-VWNLSRSSSKAVEHVLHGHFRAITDINFHPLQPEILATSSIDTYALAWDM 144
+S S+ K + +W++ S K ++ L GH + NF+P ++ + S D W++
Sbjct: 99 VSASDDKTLKLWDVR--SGKCLK-TLKGHSNYVFCCNFNP-PSNLIISGSFDETVKIWEV 154
Query: 145 RSPKKPYFRTSNWRSG-AAQVKWNHKNSNVLATSHSNIVYVWDVRKGTSPLSVLEGHSGS 203
++ K +T + S + V +N S +++ S+ + +WD G ++++ +
Sbjct: 155 KTGK--CLKTLSAHSDPVSAVHFNCSGSLIVSGSYDGLCRIWDAASGQCLKTLVDDDNPP 212
Query: 204 VNSIDFNPFNETEIMSSGNDGTVKFWDYNK 233
V+ + F+P N I+++ D T+K WDY++
Sbjct: 213 VSFVKFSP-NGKYILTATLDNTLKLWDYSR 241
Score = 59.7 bits (143), Expect = 3e-08
Identities = 46/145 (31%), Positives = 72/145 (48%), Gaps = 9/145 (6%)
Query: 87 STSNQKAIVWNLSRSSSKAVEHVLHGHFRAITDINFHPLQPEILATSSIDTYALAWDMRS 146
S++NQ V + + A++ L GH A++ + F P E LA+SS D + W
Sbjct: 17 SSANQSKEV---PENPNYALKCTLVGHTEAVSSVKFSP-NGEWLASSSADRLIIIWGAYD 72
Query: 147 PKKPYFRTSNWRS-GAAQVKWNHKNSNVLATSHSNIVYVWDVRKGTSPLSVLEGHSGSVN 205
K Y +T + + V W+ +S +++ S + +WDVR G L L+GHS V
Sbjct: 73 GK--YEKTLYGHNLEISDVAWSSDSSRLVSASDDKTLKLWDVRSGKC-LKTLKGHSNYVF 129
Query: 206 SIDFNPFNETEIMSSGNDGTVKFWD 230
+FNP + I+S D TVK W+
Sbjct: 130 CCNFNPPSNL-IISGSFDETVKIWE 153
>At4g29730 [B] KOG0264 Nucleosome remodeling factor subunit CAF1/NURF55/MSI1
Length = 496
Score = 60.8 bits (146), Expect = 1e-08
Identities = 56/253 (22%), Positives = 91/253 (35%), Gaps = 72/253 (28%)
Query: 109 VLHGHFRAITDINFHPLQPEILATSSIDTYALAWDMRSPKKPYFRTSNWRSGAAQ-VKWN 167
+ +GH + D+ F P + + D+ + WD R+ P + V WN
Sbjct: 276 IYNGHKDTVEDVAFCPSSAQEFCSVGDDSCLMLWDARTGTSPAMKVEKAHDADLHCVDWN 335
Query: 168 -HKNSNVLATSHSNIVYVWDVRKGTS-----PLSVLEGHSGSVNSIDFNPFNETEIMSSG 221
H N+ +L S N V V+D R TS P+ EGH +V + ++P + SS
Sbjct: 336 PHDNNLILTGSADNTVRVFDRRNLTSNGVGSPVYKFEGHRAAVLCVQWSPDKSSVFGSSA 395
Query: 222 NDGTVKFWDYNKVEDELQMTITTEFPVWRGRYLPFGDGYCIMPMIGGNNSVYLANSFHDS 281
DG + WD ++V
Sbjct: 396 EDGLLNIWDCDRV----------------------------------------------- 408
Query: 282 GNSESRTTKLQPTYVFK--GHTDRVTDFLWRSRHSQNTIIDDREFQLVTWSKDCD----- 334
G R TK F+ GH D+V DF W + + +V+ S +C+
Sbjct: 409 GKKSERATKTPDGLFFQHAGHRDKVVDFHWSLLN---------PWTIVSVSDNCESIGGG 459
Query: 335 --LRLWPVPDMVY 345
L++W + D++Y
Sbjct: 460 GTLQIWRMSDLIY 472
>At1g11160 [D] KOG0267 Microtubule severing protein katanin p80 subunit B
(contains WD40 repeats)
Length = 974
Score = 60.5 bits (145), Expect = 1e-08
Identities = 44/142 (30%), Positives = 67/142 (46%), Gaps = 9/142 (6%)
Query: 95 VWNLSRSSSKAVEHVLHGHFRAITDINFHPLQPEILATSSIDTYALAWDMRSPKKPYFRT 154
+W+L S + GH + + FHP E LA+ S DT WD R KK +T
Sbjct: 33 LWDLEESK---MVRAFTGHRSNCSAVEFHPFG-EFLASGSSDTNLRVWDTR--KKGCIQT 86
Query: 155 SNWRS-GAAQVKWNHKNSNVLATSHSNIVYVWDVRKGTSPLSVLEGHSGSVNSIDFNPFN 213
+ G + ++++ V++ N+V VWD+ G L + H G + S+DF+P
Sbjct: 87 YKGHTRGISTIEFSPDGRWVVSGGLDNVVKVWDLTAGKL-LHEFKCHEGPIRSLDFHPL- 144
Query: 214 ETEIMSSGNDGTVKFWDYNKVE 235
E + + D TVKFWD E
Sbjct: 145 EFLLATGSADRTVKFWDLETFE 166
>YPL151c [A] KOG0285 Pleiotropic regulator 1
Length = 451
Score = 60.1 bits (144), Expect = 2e-08
Identities = 40/154 (25%), Positives = 68/154 (43%), Gaps = 10/154 (6%)
Query: 79 PAKHHWVISTSNQKAI-VWNLSRSSSKAVEHVLHGHFRAITDINFHPLQPEILATSSIDT 137
P + W I+ SN + VW+L+ K L GH + D+ P + + S D
Sbjct: 149 PVDNEWFITGSNDTTMKVWDLATGKLKTT---LAGHVMTVRDVAVSDRHPYLFSVSE-DK 204
Query: 138 YALAWDMRSPKKPYFRTSNWRSGAAQVKWNHKNSNVLATS-HSNIVYVWDVRKGTSPLSV 196
WD+ K R + H +++AT+ +++ +WD+R P+
Sbjct: 205 TVKCWDLE--KNQIIRDYYGHLSGVRTVSIHPTLDLIATAGRDSVIKLWDMRTRI-PVIT 261
Query: 197 LEGHSGSVNSIDFNPFNETEIMSSGNDGTVKFWD 230
L GH G +N + P + +++SS D TV+ WD
Sbjct: 262 LVGHKGPINQVQCTPV-DPQVVSSSTDATVRLWD 294
>Hs4507703 [S] KOG1007 WD repeat protein TSSC1 WD repeat superfamily
Length = 387
Score = 60.1 bits (144), Expect = 2e-08
Identities = 39/155 (25%), Positives = 66/155 (42%), Gaps = 10/155 (6%)
Query: 106 VEHVLHGHFRAITDINFHPLQPEILATSSIDTYALAWDMR-SPKKPYFRTSNWRSGAAQV 164
+++ HG+ + + P+ S D + L WD++ S + +S G Q+
Sbjct: 129 LDNTAHGNMACVV---WEPMGDGKKIISLADNHILLWDLQESSSQAVLASSASLEGKGQL 185
Query: 165 KWN------HKNSNVLATSHSNIVYVWDVRKGTSPLSVLEGHSGSVNSIDFNPFNETEIM 218
K+ H N +AT++ + WD R + + H V +DFNP + +
Sbjct: 186 KFTSGRWSPHHNCTQVATANDTTLRGWDTRSMSQIYCIENAHGQLVRDLDFNPNKQYYLA 245
Query: 219 SSGNDGTVKFWDYNKVEDELQMTITTEFPVWRGRY 253
S G+D VKFWD V + ++ VW RY
Sbjct: 246 SCGDDCKVKFWDTRNVTEPVKTLEEHSHWVWNVRY 280
>At1g76260 [S] KOG1007 WD repeat protein TSSC1 WD repeat superfamily
Length = 350
Score = 60.1 bits (144), Expect = 2e-08
Identities = 43/160 (26%), Positives = 75/160 (46%), Gaps = 8/160 (5%)
Query: 73 VQWCPHPAKHHWVISTSNQKAIVWNL--SRSSSKAVEHVLHGHFRAITDINFHPLQPEIL 130
V WCP +IS Q + W+L S+ S++ + G +++ ++P +
Sbjct: 126 VLWCPS-GNSDKLISMDEQNLVFWSLDSSKKSAEVLSKESAGMRHSLSGGAWNPHDVNSV 184
Query: 131 ATSSIDTYALAWDMRSPKKPYFRTSNWRSGAAQVKWNHKNSNVLATSHSNI-VYVWDVRK 189
A +S + WD+R+ KK S R+ V +N K ++L ++ +++WD+RK
Sbjct: 185 AATSESSIQF-WDLRTMKK---NNSIERAHVRNVDYNLKREHILVSADDESGIHLWDLRK 240
Query: 190 GTSPLSVLEGHSGSVNSIDFNPFNETEIMSSGNDGTVKFW 229
P+ L GH+ ++ NP E I+S G D V W
Sbjct: 241 TKFPVQELPGHTHWTWAVRCNPEYEELILSVGTDSAVNLW 280
>SPAC4F8.11 [S] KOG0269 WD40 repeat-containing protein
Length = 846
Score = 59.7 bits (143), Expect = 3e-08
Identities = 56/241 (23%), Positives = 101/241 (41%), Gaps = 12/241 (4%)
Query: 23 VDGGFNAVSINPSGRDVVLASRKGLYVVDLDDPFSEPR-----WLHHLTSWE---VADVQ 74
V +A+S+N S V +A R+ L V+ ++ S+P L T + DV+
Sbjct: 38 VKASISAISVNKSRTKVGVAGRELLKVLAVNPNSSKPPVCISDLLQKSTQTKHISCNDVK 97
Query: 75 WCPHPAKHHWVISTSNQKAIVWNLSRSSSKAVEHVLHGHFRAITDINFHPLQPEILATSS 134
W A + + VW+++ +A+ + + H RA+ ++ P + T+S
Sbjct: 98 WGSSFASNLIFTCSPLGNLNVWDVNL---EALLYDFNEHSRAVHKLDISSFHPSYVLTAS 154
Query: 135 IDTYALAWDMRSPKKPYFRTSNWRSGAAQVKWNHKNSNVLATSHSNIVYVWDVRKGTSPL 194
D WD + N + V + + +A S I+ WD+R P
Sbjct: 155 QDGLIKLWDYKESSSTITFRGNSEAARDVVFSPSEPNEFVAAYDSGILQKWDIRFPKLPF 214
Query: 195 SVLEGHSGSVNSIDFNPFNETEIMSSGNDGTVKFWDYNKVEDELQMTITTEFPVWRGRYL 254
L H+G V ++++P N + S G D T++ WD + + +TI P+ R+
Sbjct: 215 LKLAAHNGVVLCVNYSP-NGVFLASCGRDKTIRIWDSTSNKKKSLITINNVSPLNCVRWR 273
Query: 255 P 255
P
Sbjct: 274 P 274
>SPAC25H1.06 [B] KOG0264 Nucleosome remodeling factor subunit CAF1/NURF55/MSI1
Length = 408
Score = 59.7 bits (143), Expect = 3e-08
Identities = 46/184 (25%), Positives = 75/184 (40%), Gaps = 19/184 (10%)
Query: 64 HLTSWEVADVQWCPHPAKHHWVISTSNQKAIVWN-LSRSSSKAVEHVLHGHFRAITDINF 122
H V DV++ PH + ++ + I N L ++ SK V+ + +
Sbjct: 229 HYDDSPVNDVEYHPHHTNLYIAVNDNGIAFICDNRLQQTCSKTVKAS-----NPLFSVRH 283
Query: 123 HPLQPEILATSSIDTYALAWDMRSPKKPYFRTSNWRS------------GAAQVKWNHKN 170
+P + A S L WD+R+ K F TS S G + W+ ++
Sbjct: 284 NPSIATLFALGSEQDLQL-WDLRNLNKSVFNTSEDLSDNRLKVPSRLTLGGTSLSWSWRH 342
Query: 171 SNVLATSHSNIVYVWDVRKGTSPLSVLEGHSGSVNSIDFNPFNETEIMSSGNDGTVKFWD 230
S + ++ YVW+ K V GH G+VN +DF+PF I S +D + W
Sbjct: 343 SGRIVSACQEYCYVWNFNKANPLEFVHAGHKGTVNEVDFDPFEAQCIASVADDNELHIWK 402
Query: 231 YNKV 234
N +
Sbjct: 403 PNVI 406
>Hs18544419 [A] KOG0272 U4/U6 small nuclear ribonucleoprotein Prp4 (contains
WD40 repeats)
Length = 446
Score = 59.7 bits (143), Expect = 3e-08
Identities = 37/126 (29%), Positives = 65/126 (51%), Gaps = 10/126 (7%)
Query: 108 HVLHGHFRAITDINFHPLQPEILATSSIDTYALAWDMRSPKKPYFRTSNWRSGAAQV--- 164
H GH I ++F+P Q ++AT S+DT A WD+++ ++ Y R +A++
Sbjct: 88 HTFRGHTAEIVCLSFNP-QSTLVATGSMDTTAKLWDIQNGEEVY----TLRGHSAEIISL 142
Query: 165 KWNHKNSNVLATSHSNIVYVWDVRKGTSPLSVLEGHSGSVNSIDFNPFNETEIMSSGNDG 224
+N ++ S + V VWD G +++L GH ++S FN ++ + I++ D
Sbjct: 143 SFNTSGDRIITGSFDHTVVVWDADTGRK-VNILIGHCAEISSASFN-WDCSLILTGSMDK 200
Query: 225 TVKFWD 230
T K WD
Sbjct: 201 TCKLWD 206
>SPAP17D4.01 [U] KOG0277 Peroxisomal targeting signal type 2 receptor
Length = 297
Score = 58.9 bits (141), Expect = 4e-08
Identities = 47/175 (26%), Positives = 85/175 (47%), Gaps = 5/175 (2%)
Query: 105 AVEHVLHGHFRAITDINFHPLQPEILATSSIDTYALAWDMRSPKKPYFRTSNWRSGAAQV 164
+V+ + +G I + H P +L +S D WD RS K F + + +
Sbjct: 127 SVQTLNNGSNSRILTVATHYSSPNLLGYTSSDGLCKFWDFRSSDK--FMSIEIPNQITCM 184
Query: 165 KWNHKNSNVLATS-HSNIVYVWDVRKGTSPLSVLEGHSGSVNSIDFNPFNETEIMSSGND 223
W+ N ++ T+ ++N+VY +D+ +PLSVL GH +V SI + + ++ D
Sbjct: 185 NWSKSNHRMVYTADNNNLVYCYDIANLKTPLSVLSGHQLAVRSIKSSNSAHDLLATASYD 244
Query: 224 GTVKFWDYNKVEDELQMTITTEFPVWRGRYLPFGDGYCIMPMIGGNNSVYLANSF 278
T + +D + ++ + +EF V + FGDG I +G + S+Y+ N+F
Sbjct: 245 MTSRIFDPEQHSCIRKVDLHSEF-VRDVDWSDFGDGSWI-ASVGWDESLYIWNAF 297
>Hs4505731 [U] KOG0277 Peroxisomal targeting signal type 2 receptor
Length = 323
Score = 58.9 bits (141), Expect = 4e-08
Identities = 37/118 (31%), Positives = 55/118 (46%), Gaps = 9/118 (7%)
Query: 122 FHPLQPEILATSSIDTYALAW-------DMRSPKKPYFRTSNWRSGAAQVKWNHKNSNVL 174
F P P LA ++ Y +A D FR+ +W G V W+ N +VL
Sbjct: 24 FSPYLPGRLACATAQHYGIAGCGTLLILDPDEAGLRLFRSFDWNDGLFDVTWSENNEHVL 83
Query: 175 AT-SHSNIVYVWDVRKGTSPLSVLEGHSGSVNSIDFNPFNETEIMSSGN-DGTVKFWD 230
T S + +WD K PL V + H+ V S+D++ +++ SG+ D TVK WD
Sbjct: 84 ITCSGDGSLQLWDTAKAAGPLQVYKEHAQEVYSVDWSQTRGEQLVVSGSWDQTVKLWD 141
Score = 56.2 bits (134), Expect = 3e-07
Identities = 37/157 (23%), Positives = 73/157 (45%), Gaps = 5/157 (3%)
Query: 75 WCPHPAKHHWVISTSNQKAIVWNLSRSSSKAVEHVLHGHFRAITDINFHPLQPEILATSS 134
W PH + ++ +Q +W++ + V V+ H I ++ +L T +
Sbjct: 163 WSPH-IPGCFASASGDQTLRIWDVKAAG---VRIVIPAHQAEILSCDWCKYNENLLVTGA 218
Query: 135 IDTYALAWDMRSPKKPYFRTSNWRSGAAQVKWNHKNSNVLAT-SHSNIVYVWDVRKGTSP 193
+D WD+R+ ++P F +VK++ +++VLA+ S+ V W+ K S
Sbjct: 219 VDCSLRGWDLRNVRQPVFELLGHTYAIRRVKFSPFHASVLASCSYDFTVRFWNFSKPDSL 278
Query: 194 LSVLEGHSGSVNSIDFNPFNETEIMSSGNDGTVKFWD 230
L +E H+ +DF+ + T++ D T+K +D
Sbjct: 279 LETVEHHTEFTCGLDFSLQSPTQVADCSWDETIKIYD 315
Score = 55.8 bits (133), Expect = 4e-07
Identities = 41/172 (23%), Positives = 76/172 (43%), Gaps = 5/172 (2%)
Query: 69 EVADVQWCPHPAKHHWVISTSNQKAIVWNLSRSSSKAVEHVLHGHFRAITDINFHPLQPE 128
EV V W + V + +Q +W+ + S GH I + P P
Sbjct: 113 EVYSVDWSQTRGEQLVVSGSWDQTVKLWDPTVGKSLCT---FRGHESIIYSTIWSPHIPG 169
Query: 129 ILATSSIDTYALAWDMRSPKKPYFRTSNWRSGAAQVKWNHKNSNVLATSHSNI-VYVWDV 187
A++S D WD+++ ++ ++ W N N+L T + + WD+
Sbjct: 170 CFASASGDQTLRIWDVKAAGVRIVIPAH-QAEILSCDWCKYNENLLVTGAVDCSLRGWDL 228
Query: 188 RKGTSPLSVLEGHSGSVNSIDFNPFNETEIMSSGNDGTVKFWDYNKVEDELQ 239
R P+ L GH+ ++ + F+PF+ + + S D TV+FW+++K + L+
Sbjct: 229 RNVRQPVFELLGHTYAIRRVKFSPFHASVLASCSYDFTVRFWNFSKPDSLLE 280
>YGL137w [U] KOG0276 Vesicle coat complex COPI beta' subunit
Length = 889
Score = 58.5 bits (140), Expect = 6e-08
Identities = 58/252 (23%), Positives = 106/252 (42%), Gaps = 27/252 (10%)
Query: 43 SRKGLYVVDLDDPFSEPRWLHHLTSWEVADVQWCP--------HPAKHHWVISTSNQKAI 94
+RK +V DD R ++ T +V D + P HP K + + + +
Sbjct: 65 ARKNWIIVGSDD--FRIRVFNYNTGEKVVDFEAHPDYIRSIAVHPTKPYVLSGSDDLTVK 122
Query: 95 VWNLSRSSSKAVEHVLHGHFRAITDINFHPLQPEILATSSIDTYALAWDMRSPKKPYFRT 154
+WN ++ A+E GH + + F+P P A+ +D W + + T
Sbjct: 123 LWNWE--NNWALEQTFEGHEHFVMCVAFNPKDPSTFASGCLDRTVKVWSLGQSTPNFTLT 180
Query: 155 SNWRSGAAQVKWN--HKNSNVLATSHSNIVYVWDVRKGTSPLSVLEGHSGSVNSIDFNPF 212
+ G V + ++ S + +WD + S ++ LEGH +V+ F+P
Sbjct: 181 TGQERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQT-KSCVATLEGHMSNVSFAVFHP- 238
Query: 213 NETEIMSSGNDGTVKFWDYN--KVEDELQMTITTEF-----PVWRGRYLP--FGDGYCIM 263
I+S DGT+K W+ + KVE L + + + P R Y+ F +G+ ++
Sbjct: 239 TLPIIISGSEDGTLKIWNSSTYKVEKTLNVGLERSWCIATHPTGRKNYIASGFDNGFTVL 298
Query: 264 PMIGGNNSVYLA 275
+ GN+ L+
Sbjct: 299 SL--GNDEPTLS 308
>SPBC577.09 [KL] KOG4283 Transcription-coupled repair protein CSA contains WD40
domain
Length = 404
Score = 58.5 bits (140), Expect = 6e-08
Identities = 45/158 (28%), Positives = 74/158 (46%), Gaps = 15/158 (9%)
Query: 89 SNQKAIVWNLSRSSSKAVEHVL----------HGHFRAITDINFHPLQPEILATSSIDTY 138
+N VW+L K E ++ H ITD+++ P I +SS D
Sbjct: 68 ANSSINVWDLQNIDQKEDEDLILDTLNAVPARTSHKFGITDLHWFPFDNGIFTSSSFDHT 127
Query: 139 ALAWDMRSPKKPYFRTSNWRSGAAQVKWNHKNSNVL-ATSH-SNIVYVWDVRKGTSPLSV 196
WD+ + ++ Y T W+ S+ L AT++ S+ + + D++ G+ S
Sbjct: 128 LKVWDVSTLQEAY--TFTMEDMIYSHAWSPIASHCLIATAYRSSSIRLCDMQSGSYTHS- 184
Query: 197 LEGHSGSVNSIDFNPFNETEIMSSGNDGTVKFWDYNKV 234
L GH+G+V ++D+ P NE + S DGT + WD KV
Sbjct: 185 LSGHTGNVLAVDWCPKNEFVLASGSADGTCRLWDIRKV 222
>At1g61210 [D] KOG0267 Microtubule severing protein katanin p80 subunit B
(contains WD40 repeats)
Length = 282
Score = 58.5 bits (140), Expect = 6e-08
Identities = 41/125 (32%), Positives = 60/125 (47%), Gaps = 6/125 (4%)
Query: 112 GHFRAITDINFHPLQPEILATSSIDTYALAWDMRSPKKPYFRTSNWRS-GAAQVKWNHKN 170
GH + + FHP E LA+ S D WD+R KK +T S G + +++
Sbjct: 128 GHRSNCSAVEFHPFG-EFLASGSSDANLKIWDIR--KKGCIQTYKGHSRGISTIRFTPDG 184
Query: 171 SNVLATSHSNIVYVWDVRKGTSPLSVLEGHSGSVNSIDFNPFNETEIMSSGNDGTVKFWD 230
V++ N+V VWD+ G L + H G + S+DF+P E + + D TVKFWD
Sbjct: 185 RWVVSGGLDNVVKVWDLTAGKL-LHEFKFHEGPIRSLDFHPL-EFLLATGSADRTVKFWD 242
Query: 231 YNKVE 235
E
Sbjct: 243 LETFE 247
>SPBP22H7.07 [A] KOG0285 Pleiotropic regulator 1
Length = 473
Score = 57.8 bits (138), Expect = 1e-07
Identities = 40/163 (24%), Positives = 76/163 (46%), Gaps = 9/163 (5%)
Query: 70 VADVQWCPHPAKHHWVISTSNQKAI-VWNLSRSSSKAVEHVLHGHFRAITDINFHPLQPE 128
+A V+ +H ++ S K + W+L ++K + H HGH + + HP +
Sbjct: 205 IATVRGLAVSPRHPYLFSCGEDKMVKCWDLE--TNKVIRHY-HGHLSGVYALKLHPTL-D 260
Query: 129 ILATSSIDTYALAWDMRSPKKPYFRTSNWRSGAAQVKWNHKNSNVLATSHSNIVYVWDVR 188
+L T+ D A WDMR+ + + S +S A + + V+ S + + +WD+
Sbjct: 261 VLVTAGRDAVARVWDMRTRQNVHV-LSGHKSTVASLAVQEFDPQVVTGSMDSTIRLWDLA 319
Query: 189 KGTSPLSVLEGHSGSVNSIDFNPFNETEIMSSGNDGTVKFWDY 231
G + L+ L H +V ++ +P T +SG+ +K W +
Sbjct: 320 AGKT-LTTLTHHKKTVRALSLHPDEFT--FASGSSDNIKHWKF 359
>SPBC354.03 [R] KOG0266 WD40 repeat-containing protein
Length = 380
Score = 57.8 bits (138), Expect = 1e-07
Identities = 38/121 (31%), Positives = 62/121 (50%), Gaps = 4/121 (3%)
Query: 110 LHGHFRAITDINFHPLQPEILATSSIDTYALAWDMRSPKKPYFRTSNWRSGAAQVKWNHK 169
L GH +++T ++ P +ATSS D W + + ++R G +QVKW
Sbjct: 50 LFGHEKSVTCVSVSP-NKRWIATSSSDGTIKIWSALTFRLECTLFGHYR-GISQVKWATG 107
Query: 170 NSNVLATSHSNIVYVWDVRKGTSPLSVLEGHSGSVNSIDFNPFNETEIMSSGNDGTVKFW 229
+ + + S + +WD K S + L+GH+ V+SIDFNP T ++S D TV+ W
Sbjct: 108 SKYLASASDDKTIRIWDFEKRCS-VRCLKGHTNYVSSIDFNPLG-TLLVSGSWDETVRIW 165
Query: 230 D 230
+
Sbjct: 166 N 166
>Hs4758558 [A] KOG0272 U4/U6 small nuclear ribonucleoprotein Prp4 (contains
WD40 repeats)
Length = 522
Score = 57.8 bits (138), Expect = 1e-07
Identities = 50/211 (23%), Positives = 92/211 (42%), Gaps = 23/211 (10%)
Query: 28 NAVSINPSGRDVVLASRKG-----LYVVDLDDPFSEPRWLHHLTSWEVADVQWCPHPAKH 82
+ VS++P +DV LAS L+ +D D+P ++ + VA V W HP+
Sbjct: 285 STVSLDP--KDVNLASCAADGSVKLWSLDSDEPVADIEG----HTVRVARVMW--HPSGR 336
Query: 83 HWVISTSNQKAIVWNLSRSSSKAVEHVLH--GHFRAITDINFHPLQPEILATSSIDTYAL 140
+ ++ +W+L +A E +LH GH + DI FH + T +D +
Sbjct: 337 FLGTTCYDRSWRLWDL-----EAQEEILHQEGHSMGVYDIAFHQ-DGSLAGTGGLDAFGR 390
Query: 141 AWDMRSPKKPYFRTSNWRSGAAQVKWNHKNSNVLATSHSNIVYVWDVRKGTSPLSVLEGH 200
WD+R+ + F + + + ++ ++ S N VWD+R+ ++ H
Sbjct: 391 VWDLRTGRCIMFLEGHLKE-IYGINFSPNGYHIATGSGDNTCKVWDLRQRRCVYTI-PAH 448
Query: 201 SGSVNSIDFNPFNETEIMSSGNDGTVKFWDY 231
V + F P + +++ D T K W +
Sbjct: 449 QNLVTGVKFEPIHGNFLLTGAYDNTAKIWTH 479
>Hs13899346 [R] KOG0302 Ribosome Assembly protein
Length = 446
Score = 57.8 bits (138), Expect = 1e-07
Identities = 32/124 (25%), Positives = 59/124 (46%), Gaps = 5/124 (4%)
Query: 112 GHFRAITDINFHPLQPEILATSSIDTYALAWDMRS--PKKPYFRTSNWRSGAAQV-KWNH 168
GH R++ D+ + P + + A+ S D WD+R+ K T+ G V W+
Sbjct: 259 GHTRSVEDLQWSPTENTVFASCSADASIRIWDIRAAPSKACMLTTATAHDGDVNVISWSR 318
Query: 169 KNSNVLATSHSNIVYVWDVR--KGTSPLSVLEGHSGSVNSIDFNPFNETEIMSSGNDGTV 226
+ +L+ + +WD+R K SP++ + H V S++++P + +SG D +
Sbjct: 319 REPFLLSGGDDGALKIWDLRQFKSGSPVATFKQHVAPVTSVEWHPQDSGVFAASGADHQI 378
Query: 227 KFWD 230
WD
Sbjct: 379 TQWD 382
>YPR178w [A] KOG0272 U4/U6 small nuclear ribonucleoprotein Prp4 (contains
WD40 repeats)
Length = 465
Score = 57.4 bits (137), Expect = 1e-07
Identities = 42/175 (24%), Positives = 85/175 (48%), Gaps = 11/175 (6%)
Query: 69 EVADVQWCPHPAKHHWVISTSNQKAIVWNLSRSSSKAVEHVLH---GHFRAITDINFHPL 125
++ + W HP ++ +IS + + ++ N S+ + +L GH R I+D+ +HP
Sbjct: 220 KIGAIDW--HPDSNNQMISCA-EDGLIKNFQYSNEEGGLRLLGDLVGHERRISDVKYHP- 275
Query: 126 QPEILATSSIDTYALAWDMRSPKKPYFRTSNWRSGAAQVKWNHKNSNVLATSHSNIVYVW 185
+ + ++S D WD + ++ + + G + + S V + ++ +W
Sbjct: 276 SGKFIGSASHDMTWRLWDASTHQELLLQEGH-DKGVFSLSFQCDGSLVCSGGMDSLSMLW 334
Query: 186 DVRKGTSPLSVLEGHSGSVNSIDFNPFNETEIMSSGNDGTVKFWDYNKVEDELQM 240
D+R G S + L GHS + ++ ++P N ++ + G DG + WD K DE Q+
Sbjct: 335 DIRSG-SKVMTLAGHSKPIYTVAWSP-NGYQVATGGGDGIINVWDIRK-RDEGQL 386
>SPAC29E6.01 [S] KOG0281 Beta-TrCP (transducin repeats containing)/Slimb
proteins
Length = 506
Score = 57.4 bits (137), Expect = 1e-07
Identities = 42/155 (27%), Positives = 82/155 (52%), Gaps = 10/155 (6%)
Query: 83 HWVISTS-NQKAIVWNLSRSS-SKAVEHVLHGHFRAITDINFHPLQPEILATSSIDTYAL 140
+++IS+S + A VW L +S ++A HVL GH ++ + + + ++ T+S D
Sbjct: 314 NYIISSSRDHTARVWRLDATSPAEACMHVLRGHLASVNSVQYSS-KTGLIVTASSDRTLR 372
Query: 141 AWDMRSPKKPYFRTSNWRSGAAQVKWNHKNSNVLATSHSNIVYVWDVRKGTSPLSVLEGH 200
WD+ + ++ R G A ++N K +++ S + +++ G L +L+GH
Sbjct: 373 TWDITTGHCIRIIHAHQR-GIACAQYNGKF--IVSGSSDLTIRIFEASSGKL-LRMLQGH 428
Query: 201 SGSVNSIDFNPFNETEIMSSGNDGTVKFWDYNKVE 235
+ ++ FN + +I+S G DGTV+ W++N E
Sbjct: 429 EDLIRTVRFN---DEKIVSGGYDGTVRIWNFNTGE 460
>Hs14149734 [Z] KOG0303 Actin-binding protein Coronin contains WD40 repeats
Length = 489
Score = 57.4 bits (137), Expect = 1e-07
Identities = 50/200 (25%), Positives = 84/200 (42%), Gaps = 19/200 (9%)
Query: 70 VADVQWCPHPAKHHWVISTSNQKA--IVWNLSRS--SSKAVEHV--LHGHFRAITDINFH 123
V D+ WCPH + VI++ ++ +VW + + +S E V L GH + + I +H
Sbjct: 85 VLDIDWCPHNDE---VIASGSEDCTVMVWQIPENGLTSPLTEPVVVLEGHTKRVGIIAWH 141
Query: 124 PLQPEILATSSIDTYALAWDMRSPKKPYFRTSNWRSGAAQVKWNHKNSNVLATSHSNIVY 183
P +L ++ D L W++ + ++ Y S V WNH S + V
Sbjct: 142 PTARNVLLSAGCDNVVLIWNVGTAEELYRLDSLHPDLIYNVSWNHNGSLFCSACKDKSVR 201
Query: 184 VWDVRKGTSPLSVLEGHSG-----SVNSIDFNPFNETEIMSSGNDGTVKFWDYNKVEDEL 238
+ D R+GT + H G ++ D F T S ++ + WD +E+ +
Sbjct: 202 IIDPRRGTLVAEREKAHEGARPMRAIFLADGKVF--TTGFSRMSERQLALWDPENLEEPM 259
Query: 239 QMTITTEFPVWRGRYLPFGD 258
+ E G LPF D
Sbjct: 260 AL---QELDSSNGALLPFYD 276
>At5g58230 [B] KOG0264 Nucleosome remodeling factor subunit CAF1/NURF55/MSI1
Length = 424
Score = 57.4 bits (137), Expect = 1e-07
Identities = 54/274 (19%), Positives = 113/274 (40%), Gaps = 25/274 (9%)
Query: 88 TSNQKAIVWNLSRSSSKAV-------EHVLHGHFRAITDINFHPLQPEILATSSIDTYAL 140
T N + V++ S+ SK + L GH +++ + L + S D
Sbjct: 145 TVNAEVYVFDYSKHPSKPPLDGACNPDLKLRGHSSEGYGLSWSKFKQGHLLSGSDDAQIC 204
Query: 141 AWDMRSPKKPYFRTSNWRSGAAQ-----VKWNHKNSNVLAT-SHSNIVYVWDVRK--GTS 192
WD+ + K + A + V W+ ++ + + + +WD+R +
Sbjct: 205 LWDINATPKNKSLDAQQIFKAHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRSPSASK 264
Query: 193 PLSVLEGHSGSVNSIDFNPFNETEIMSSGNDGTVKFWDYNKVEDELQMTITTEFPVWRGR 252
P+ + HS VN + FNPFNE + + D TVK +D K+ L + + V++
Sbjct: 265 PVQSVVAHSMEVNCLAFNPFNEWVVATGSTDKTVKLFDLRKLSTALHTFDSHKEEVFQVG 324
Query: 253 YLPFGDGYCIMPMIGGNNSVY-LANSFHDSGNSESRTTKLQPTYVFKGHTDRVTDFLWRS 311
+ P + +G V+ L+ + ++ + ++ GHT +++DF W
Sbjct: 325 WNPKNETILASCCLGRRLMVWDLSRIDEEQTVEDAEDGPPELLFIHGGHTSKISDFSWN- 383
Query: 312 RHSQNTIIDDREFQLVTWSKDCDLRLWPVPDMVY 345
++ + + ++D L++W + + +Y
Sbjct: 384 --------PCEDWVISSVAEDNILQIWQMAENIY 409
Score = 57.0 bits (136), Expect = 2e-07
Identities = 43/177 (24%), Positives = 77/177 (43%), Gaps = 21/177 (11%)
Query: 70 VADVQWCPHPAKHHWVIST--SNQKAIVWNL-SRSSSKAVEHVLHGHFRAITDINFHPLQ 126
V DV W +H ++ + +Q ++W+L S S+SK V+ V+ H + + F+P
Sbjct: 230 VEDVAW---HLRHEYLFGSVGDDQYLLIWDLRSPSASKPVQSVV-AHSMEVNCLAFNPFN 285
Query: 127 PEILATSSIDTYALAWDMRSPKKPYFRTSNWRSGAAQVKWNHKNSNVLAT-SHSNIVYVW 185
++AT S D +D+R + + QV WN KN +LA+ + VW
Sbjct: 286 EWVVATGSTDKTVKLFDLRKLSTALHTFDSHKEEVFQVGWNPKNETILASCCLGRRLMVW 345
Query: 186 DVRKGTSPLSVLE-------------GHSGSVNSIDFNPFNETEIMSSGNDGTVKFW 229
D+ + +V + GH+ ++ +NP + I S D ++ W
Sbjct: 346 DLSRIDEEQTVEDAEDGPPELLFIHGGHTSKISDFSWNPCEDWVISSVAEDNILQIW 402
>YDL195w [U] KOG0307 Vesicle coat complex COPII subunit SEC31
Length = 1273
Score = 57.0 bits (136), Expect = 2e-07
Identities = 34/117 (29%), Positives = 62/117 (52%), Gaps = 10/117 (8%)
Query: 129 ILATSSIDTYALAWDMRSPKKP-YFRTSNWRSGAAQ----VKWNHKNSNVLATSHSN--- 180
+ A++ +A WD+++ K+ + ++ SG Q V+W+ KNS +AT+ +
Sbjct: 175 VFASAGSSNFASIWDLKAKKEVIHLSYTSPNSGIKQQLSVVEWHPKNSTRVATATGSDND 234
Query: 181 -IVYVWDVRKGTSPLSVL-EGHSGSVNSIDFNPFNETEIMSSGNDGTVKFWDYNKVE 235
+ +WD+R +PL L +GH + S+D+ +E ++SSG D TV W+ E
Sbjct: 235 PSILIWDLRNANTPLQTLNQGHQKGILSLDWCHQDEHLLLSSGRDNTVLLWNPESAE 291
>Hs8922428 [S] KOG0271 Notchless-like WD40 repeat-containing protein
Length = 485
Score = 57.0 bits (136), Expect = 2e-07
Identities = 33/125 (26%), Positives = 54/125 (42%), Gaps = 6/125 (4%)
Query: 110 LHGHFRAITDINFHPLQPEILATSSIDTYALAWDMRSPKKPYFRTSNWRSGAAQVKWNHK 169
L GH A+ + F P + LA+ S DT WD+ S + P+F R + W+
Sbjct: 110 LEGHSEAVISVAFSPTG-KYLASGSGDTTVRFWDL-STETPHFTCKGHRHWVLSISWSPD 167
Query: 170 NSNVLATSHSNIVYVWDVRKGTSPLSVLEGHSGSVNSIDFNPFNETE----IMSSGNDGT 225
+ + + + +WD G L GHS + + + P + + SS DG+
Sbjct: 168 GKKLASGCKNGQILLWDPSTGKQVGRTLAGHSKWITGLSWEPLHANPECRYVASSSKDGS 227
Query: 226 VKFWD 230
V+ WD
Sbjct: 228 VRIWD 232
>Hs19923529 [A] KOG0284 Polyadenylation factor I complex subunit PFS2
Length = 1336
Score = 57.0 bits (136), Expect = 2e-07
Identities = 37/184 (20%), Positives = 81/184 (43%), Gaps = 5/184 (2%)
Query: 79 PAKHHWVISTSNQKAIVWNLSRSSSKAVEHVLHGHFRAITDINFHPLQPEILATSSIDTY 138
P + + + + +W+ R E +L GH + +++HP + +++ S
Sbjct: 212 PTDNKFATCSDDGTVRIWDFLRCHE---ERILRGHGADVKCVDWHPTKGLVVSGSKDSQQ 268
Query: 139 ALA-WDMRSPKKPYFRTSNWRSGAAQVKWNHKNSNVLATSHSNIVYVWDVRKGTSPLSVL 197
+ WD ++ + ++ ++ +VK N + +L S ++ ++D+R L V
Sbjct: 269 PIKFWDPKTGQSLATLHAH-KNTVMEVKLNLNGNWLLTASRDHLCKLFDIRNLKEELQVF 327
Query: 198 EGHSGSVNSIDFNPFNETEIMSSGNDGTVKFWDYNKVEDELQMTITTEFPVWRGRYLPFG 257
GH ++ ++P +E S G+DG++ FW ++ M + E +W + P G
Sbjct: 328 RGHKKEATAVAWHPVHEGLFASGGSDGSLLFWHVGVEKEVGGMEMAHEGMIWSLAWHPLG 387
Query: 258 DGYC 261
C
Sbjct: 388 HILC 391
>CE00901 [R] KOG0266 WD40 repeat-containing protein
Length = 376
Score = 57.0 bits (136), Expect = 2e-07
Identities = 54/234 (23%), Positives = 98/234 (41%), Gaps = 29/234 (12%)
Query: 70 VADVQWCPHPAKHHWVISTSNQKAIVWNLSRSSSKAVEHVLHGHFRAITDINFHPLQPEI 129
V D+ W + V+S S+ K + + + + L GH + NF+P Q +
Sbjct: 132 VNDIAWS---SDSRCVVSASDDKTL--KIFEIVTSRMTKTLKGHNNYVFCCNFNP-QSSL 185
Query: 130 LATSSIDTYALAWDMRSPKKPYFRTSNWRSG-AAQVKWNHKNSNVLATSHSNIVYVWDVR 188
+ + S D WD+++ +T S + V +N S + + S+ +V +WD
Sbjct: 186 VVSGSFDESVRIWDVKTGM--CIKTLPAHSDPVSAVSFNRDGSLIASGSYDGLVRIWDTA 243
Query: 189 KGTSPLSVLEGHSGSVNSIDFNPFNETEIMSSGNDGTVKFWDYNKVEDELQMT------- 241
G ++++ + V + F+P N I++S D T+K WD++K + Q T
Sbjct: 244 NGQCIKTLVDDENPPVAFVKFSP-NGKYILASNLDSTLKLWDFSKGKTLKQYTGHENSKY 302
Query: 242 -ITTEFPVWRGRYLPFGDGYC-----------IMPMIGGNNSVYLANSFHDSGN 283
I F V G+++ G C I+ + G+ LA+ H N
Sbjct: 303 CIFANFSVTGGKWIISGSEDCKIYIWNLQTREIVQCLEGHTQPVLASDCHPVQN 356
>SPCC18.05c [S] KOG0271 Notchless-like WD40 repeat-containing protein
Length = 502
Score = 56.6 bits (135), Expect = 2e-07
Identities = 38/157 (24%), Positives = 73/157 (46%), Gaps = 8/157 (5%)
Query: 76 CPHPAKHHWVISTSNQKAIVWNLSRSSSKAVEHVLHGHFRAITDINFHPLQPEILATSSI 135
C + V ++ + + I+W+ +S+ + +HGH + + +F P +AT+S
Sbjct: 353 CLKQSGERLVSASDDLQLILWDPQKSTKPITK--MHGHQKVVNHASFSP-DGRCIATASF 409
Query: 136 DTYALAWDMRSPKKPYFRTSNWRSGAA-QVKWNHKNSNVLATSHSNIVYVWDVRKGTSPL 194
D+ WD ++ K + T A Q W+ + ++++S + VWDVR
Sbjct: 410 DSSVRLWDGKTGK--FLATLRGHVAAVYQCAWSTDSRLLVSSSQDTTLKVWDVRSKKMKF 467
Query: 195 SVLEGHSGSVNSIDFNPFNETEIMSSGNDGTVKFWDY 231
L GH V ++D++P + + S G D V+ W +
Sbjct: 468 D-LPGHEDQVFAVDWSPDGQ-RVASGGADKAVRIWSH 502
>Hs16445438 [R] KOG0644 Uncharacterized conserved protein contains WD40 repeat
and BROMO domains
Length = 2269
Score = 56.6 bits (135), Expect = 2e-07
Identities = 38/127 (29%), Positives = 66/127 (51%), Gaps = 12/127 (9%)
Query: 112 GHFRAITDINFHPLQPEILATSSIDTYALAWDMRSPKKPYFRTSNWRSGAAQVK---WNH 168
GH A+ + F I T S D W + + S R +A++ N+
Sbjct: 184 GHLSAVYCVAFDRTGHRIF-TGSDDCLVKIWSTHNGRL----LSTLRGHSAEISDMAVNY 238
Query: 169 KNSNVLATSHSNIVYVWDVRKGTSPLSVLEGHSGSVNSIDFNPF---NETEIMSSGNDGT 225
+N+ + A S I+ VW +R +P++VL+GH+GS+ S+ F+P ++ ++S+G DGT
Sbjct: 239 ENTMIAAGSCDKIIRVWCLRT-CAPVAVLQGHTGSITSLQFSPMAKGSQRYMVSTGADGT 297
Query: 226 VKFWDYN 232
V FW ++
Sbjct: 298 VCFWQWD 304
>Hs16445436 [R] KOG0644 Uncharacterized conserved protein contains WD40 repeat
and BROMO domains
Length = 2320
Score = 56.6 bits (135), Expect = 2e-07
Identities = 38/127 (29%), Positives = 66/127 (51%), Gaps = 12/127 (9%)
Query: 112 GHFRAITDINFHPLQPEILATSSIDTYALAWDMRSPKKPYFRTSNWRSGAAQVK---WNH 168
GH A+ + F I T S D W + + S R +A++ N+
Sbjct: 184 GHLSAVYCVAFDRTGHRIF-TGSDDCLVKIWSTHNGRL----LSTLRGHSAEISDMAVNY 238
Query: 169 KNSNVLATSHSNIVYVWDVRKGTSPLSVLEGHSGSVNSIDFNPF---NETEIMSSGNDGT 225
+N+ + A S I+ VW +R +P++VL+GH+GS+ S+ F+P ++ ++S+G DGT
Sbjct: 239 ENTMIAAGSCDKIIRVWCLRT-CAPVAVLQGHTGSITSLQFSPMAKGSQRYMVSTGADGT 297
Query: 226 VKFWDYN 232
V FW ++
Sbjct: 298 VCFWQWD 304
>CE28516 [S] KOG0269 WD40 repeat-containing protein
Length = 3901
Score = 56.6 bits (135), Expect = 2e-07
Identities = 56/230 (24%), Positives = 89/230 (38%), Gaps = 19/230 (8%)
Query: 87 STSNQKAIVWNLSRSSSKAVEHVLHGHFRAITDINFHPLQPEILATSSIDTYALAWDMRS 146
++SN + WN+SR + V H R+ T +++H P IL + S D ++DMR
Sbjct: 121 TSSNGSIVCWNISRRNKS----VFKSHERSATCLDWHATTPYILVSGSRDCTVKSYDMRV 176
Query: 147 PKKPY--FRTSNWRS--GAAQVKWNHKNSNVLATSHSNIVYVWDVRKGTSPLSVLEGHSG 202
F N S A K + ++ +WD+R+ + H
Sbjct: 177 KDNHQLTFSDRNCESIRDVAMCKAPGFDDYFFTGDDGGVLRLWDLRQTRRWVFQKVAHRS 236
Query: 203 SVNSIDFNPFNETEIMSSGN-DGTVKFWDYNKVEDELQMTITTEFPVWRGRYLPFGDGYC 261
V+++ NP N T I + G D VK W++ E + T P+ R + P +
Sbjct: 237 FVSTLSLNPHNRTLIATGGGRDKMVKIWEWTGPELNRISVVETTAPLGRVAWRPDRPYHL 296
Query: 262 IMPMIGGNNSVYLANSFHDSGNSESRTTKLQPTYVFKGHTDRVTDFLWRS 311
SV++ + R L P + H D VTD W S
Sbjct: 297 ATCASVNETSVHV---------WDVRRPYL-PYVTYDEHRDSVTDACWPS 336
>At2g32700 [R] KOG0266 WD40 repeat-containing protein
Length = 787
Score = 56.6 bits (135), Expect = 2e-07
Identities = 43/212 (20%), Positives = 99/212 (46%), Gaps = 17/212 (8%)
Query: 70 VADVQWCPHPAKHHWVISTSNQKAI-VWNLSRSSSKAVEHVLHGHFRAITDINFHPLQPE 128
+ DV++ P+ + + ++S K I +W+ S + GH + I+FHP + E
Sbjct: 555 ITDVRFRPNSTQ---LATSSFDKTIKIWDASDPGYFL--RTISGHAAPVMSIDFHPKKTE 609
Query: 129 ILATSSIDTYALAWDMRSPKKPYFRTSNWRSGAAQVKWNHKNSNVLATSHSNIVYVWDVR 188
+L + + WD+ + + + QV++ + LA + N V ++D+
Sbjct: 610 LLCSCDSNNDIRFWDINASC-----VRAVKGASTQVRFQPRTGQFLAAASENTVSIFDIE 664
Query: 189 KGTSPLSVLEGHSGSVNSIDFNPFNETEIMSSGNDGTVKFWDYNKVEDELQMTITTEFPV 248
+++ +GHS +V+S+ ++P E+++S ++ VK W + + +++ +
Sbjct: 665 NNNKRVNIFKGHSSNVHSVCWSP--NGELVASVSEDAVKLWSLSSGDCIHELSNSGN--- 719
Query: 249 WRGRYLPFGDGYCIMPMIGGNNSVYLANSFHD 280
+ + F Y + +IGG ++ L N+ +
Sbjct: 720 -KFHSVVFHPSYPDLLVIGGYQAIELWNTMEN 750
>SPAC144.13c [DO] KOG0305 Anaphase promoting complex Cdc20 Cdh1 and Ama1
subunits
Length = 556
Score = 56.2 bits (134), Expect = 3e-07
Identities = 62/264 (23%), Positives = 106/264 (39%), Gaps = 37/264 (14%)
Query: 83 HWVISTSNQKAIVWNLSRSSSKAVEHVLHGHFRAITDINFHPLQPEILATSSIDTYALAW 142
H + T N +W+ + + GH + ++++ +L++ D + L
Sbjct: 305 HLAVGTHNGSVEIWDAATCKKT---RTMSGHTERVGALSWND---HVLSSGGRDNHILHR 358
Query: 143 DMRSPKKPYFRT-SNWRSGAAQVKWNHKNSNVLATS-HSNIVYVWDVRKGTSPLSVLEGH 200
D+R+P+ YFR + R ++WN N N+LA+ + N + VWD + PL H
Sbjct: 359 DVRAPEH-YFRVLTAHRQEVCGLEWN-SNENLLASGGNDNALMVWD-KFEEKPLYSFHNH 415
Query: 201 SGSVNSIDFNPFNETEIMSSGN--DGTVKFWDYNKVEDELQMTITTEFPVWRGRYLPFGD 258
+V +I ++P + S G D T+K W N + I T G
Sbjct: 416 IAAVKAITWSPHQRGILASGGGTADRTIKLW--NTQRGSMLHNIDT------------GS 461
Query: 259 GYCIMPMIGGNNSVYLANSFHDSGNSESRTTKLQPTYVFKGHTDRVTDFLWRSRHSQNTI 318
C + N + F ++ + + KGHTDRV +L S + +N
Sbjct: 462 QVCNLLWSKQTNEFISTHGFMENEVALWNYPSVSRVGTLKGHTDRVL-YLAMSPNGEN-- 518
Query: 319 IDDREFQLVTWSKDCDLRLWPVPD 342
+VT + D LR W + D
Sbjct: 519 -------IVTGAADETLRFWKLFD 535
>Hs4758560 [A] KOG0265 U5 snRNP-specific protein-like factor and related
proteins
Length = 357
Score = 56.2 bits (134), Expect = 3e-07
Identities = 55/240 (22%), Positives = 91/240 (37%), Gaps = 28/240 (11%)
Query: 101 SSSKAVEHVLHGHFRAITDINFHPLQPEILATSSIDTYALAWDMRSPKKPYFRTSNWRSG 160
SS +A +L GH + FHP LA++ D L W++ Y
Sbjct: 53 SSLQAPIMLLSGHEGEVYCCKFHP-NGSTLASAGFDRLILLWNVYGDCDNYATLKGHSGA 111
Query: 161 AAQVKWNHKNSNVLATSHSNIVYVWDVRKGTSPLSVLEGHSGSVNSIDFNPFNETEIMSS 220
++ +N S + + S V VWD G + L+GH+ VNS + + +
Sbjct: 112 VMELHYNTDGSMLFSASTDKTVAVWDSETGER-VKRLKGHTSFVNSCYPARKSPQLVCTG 170
Query: 221 GNDGTVKFWDYNKVEDELQMTITTEFPVWRGRYLPFGDGYCIMPMIGGNNSVYLANSFHD 280
+DGTVK WD K + F + Y ++ + + S + + D
Sbjct: 171 SDDGTVKLWDIRK----------------KAAIQTFQNTYQVLAVTFNDTSDQIISGGID 214
Query: 281 SGNSESRTTKLQPTYVFKGHTDRVTDFLWRSRHSQNTIIDDREFQLVTWSKDCDLRLWPV 340
+ + + TY +GH D VT S S L++ + D +R+W V
Sbjct: 215 NDIKVWDLRQNKLTYTMRGHADSVTGLSLSSEGS----------YLLSNAMDNTVRVWDV 264
Score = 53.5 bits (127), Expect = 2e-06
Identities = 36/136 (26%), Positives = 67/136 (48%), Gaps = 13/136 (9%)
Query: 95 VWNLSRSSSKAVEHVLHGHFRAITDINFHPLQPEILATSSIDTYALAWDMR--SPKKPYF 152
VW+L ++ + + + GH ++T ++ + L ++++D WD+R +PK+
Sbjct: 219 VWDLRQNK---LTYTMRGHADSVTGLSLSS-EGSYLLSNAMDNTVRVWDVRPFAPKERCV 274
Query: 153 R-----TSNWRSGAAQVKWNHKNSNVLATSHSNIVYVWDVRKGTSPLSVLEGHSGSVNSI 207
+ N+ + W+ S + A S VYVWD L L GH+GS+N +
Sbjct: 275 KIFQGNVHNFEKNLLRCSWSPDGSKIAAGSADRFVYVWDT-TSRRILYKLPGHAGSINEV 333
Query: 208 DFNPFNETEIMSSGND 223
F+P +E I+S+ +D
Sbjct: 334 AFHP-DEPIIISASSD 348
>Hs4505895 [A] KOG0285 Pleiotropic regulator 1
Length = 514
Score = 56.2 bits (134), Expect = 3e-07
Identities = 37/136 (27%), Positives = 66/136 (48%), Gaps = 8/136 (5%)
Query: 96 WNLSRSSSKAVEHVLHGHFRAITDINFHPLQPEILATSSIDTYALAWDMRSPKKPYFRTS 155
W+L + K + H HGH A+ ++ HP ++L T S D+ A WD+R+ K S
Sbjct: 273 WDLEYN--KVIRHY-HGHLSAVYGLDLHP-TIDVLVTCSRDSTARIWDVRT-KASVHTLS 327
Query: 156 NWRSGAAQVKWNHKNSNVLATSHSNIVYVWDVRKGTSPLSVLEGHSGSVNSIDFNPFNET 215
+ A V+ ++ SH + +WD+ G + ++ L H SV ++ +P + T
Sbjct: 328 GHTNAVATVRCQAAEPQIITGSHDTTIRLWDLVAGKTRVT-LTNHKKSVRAVVLHPRHYT 386
Query: 216 EIMSSGNDGTVKFWDY 231
+SG+ +K W +
Sbjct: 387 --FASGSPDNIKQWKF 400
Score = 54.7 bits (130), Expect = 8e-07
Identities = 40/154 (25%), Positives = 72/154 (45%), Gaps = 9/154 (5%)
Query: 78 HPAKHHWVISTSNQKAIVWNLSRSSSKAVEHVLHGHFRAITDINFHPLQPEILATSSIDT 137
HP V + + A +W++ +KA H L GH A+ + +P+I+ T S DT
Sbjct: 297 HPTIDVLVTCSRDSTARIWDVR---TKASVHTLSGHTNAVATVRCQAAEPQII-TGSHDT 352
Query: 138 YALAWDMRSPKKPYFRTSNWRSGAAQVKWNHKNSNVLATSHSNIVYVWDVRKGTSPLSVL 197
WD+ + K T++ +S A V H A+ + + W G S + L
Sbjct: 353 TIRLWDLVAGKTRVTLTNHKKSVRAVVL--HPRHYTFASGSPDNIKQWKFPDG-SFIQNL 409
Query: 198 EGHSGSVNSIDFNPFNETEIMSSGNDGTVKFWDY 231
GH+ +N++ N ++ ++S ++GT+ WD+
Sbjct: 410 SGHNAIINTLTVN--SDGVLVSGADNGTMHLWDW 441
>CE05533 [A] KOG0285 Pleiotropic regulator 1
Length = 494
Score = 56.2 bits (134), Expect = 3e-07
Identities = 41/156 (26%), Positives = 72/156 (45%), Gaps = 9/156 (5%)
Query: 81 KHHWVISTSNQKAI-VWNLSRSSSKAVEHVLHGHFRAITDINFHPLQPEILATSSIDTYA 139
+H ++ S K + W+L + K + H HGH A+ ++ HP ++L T + D+ A
Sbjct: 237 RHPFLFSGGEDKQVKCWDLEYN--KVIRHY-HGHLSAVQALSVHP-SLDVLVTCARDSTA 292
Query: 140 LAWDMRSPKKPYFRTSNWRSGAAQVKWNHKNSNVLATSHSNIVYVWDVRKGTSPLSVLEG 199
WDMR+ + + + + A V + V+ SH V +WD+ G S + L
Sbjct: 293 RVWDMRTKAQVHCFAGHTNT-VADVVCQSVDPQVITASHDATVRLWDLAAGRS-MCTLTH 350
Query: 200 HSGSVNSIDFNPFNETEIMSSGNDGTVKFWDYNKVE 235
H SV ++ +P + +S + +K W K E
Sbjct: 351 HKKSVRALTIHP--RLNMFASASPDNIKQWKLPKGE 384
Score = 55.1 bits (131), Expect = 6e-07
Identities = 40/168 (23%), Positives = 80/168 (46%), Gaps = 13/168 (7%)
Query: 64 HLTSWEVADVQWCPHPAKHHWVISTSNQKAIVWNLSRSSSKAVEHVLHGHFRAITDINFH 123
HL++ + V HP+ V + A VW++ +KA H GH + D+
Sbjct: 267 HLSAVQALSV----HPSLDVLVTCARDSTARVWDMR---TKAQVHCFAGHTNTVADVVCQ 319
Query: 124 PLQPEILATSSIDTYALAWDMRSPKKPYFRTSNWRSGAAQVKWNHKNSNVLATSHSNIVY 183
+ P+++ T+S D WD+ + + T + +S A H N+ A++ + +
Sbjct: 320 SVDPQVI-TASHDATVRLWDLAAGRSMCTLTHHKKSVRALT--IHPRLNMFASASPDNIK 376
Query: 184 VWDVRKGTSPLSVLEGHSGSVNSIDFNPFNETEIMSSGNDGTVKFWDY 231
W + KG + L GH+ +N++ N ++ ++S ++G++ FWD+
Sbjct: 377 QWKLPKGEF-MQNLSGHNAIINTLSSN--DDGVVVSGADNGSLCFWDW 421
>SPBC15D4.14 [K] KOG0263 Transcription initiation factor TFIID subunit TAF5
(also component of histone acetyltransferase SAGA)
Length = 642
Score = 55.8 bits (133), Expect = 4e-07
Identities = 48/187 (25%), Positives = 86/187 (45%), Gaps = 15/187 (8%)
Query: 63 HHLTSWEVADVQWCPHPAKHHWVISTSNQKAIVWNLSRSSSKAVEHVLHGHFRAITDINF 122
H+ W DVQ+ P +++ ++ +Q A +W++ + A V GH + ++F
Sbjct: 444 HNAPIW---DVQFSPFG--YYFATASHDQTARLWDVEHA---APLRVFVGHQNDVDCVSF 495
Query: 123 HPLQPEILATSSIDTYALAWDMRSPKKPYFRTSNWRSGAAQVKWNHKNSNVLATSHSNIV 182
HP LAT S D WD+R+ ++ S + + + ++ + S I+
Sbjct: 496 HP-NAAYLATGSSDHTTRMWDVRTGGTVRVFNAH-HSPVSALCMSADGLSLASADESGII 553
Query: 183 YVWDVRKGTSPLSVLEGHSGSVNSIDFNPFNETEIMSSGNDGTVKFWDY---NKVEDELQ 239
VWD+R +S ++ HS V S+ F+ ++ ++S G D V FWD N + D Q
Sbjct: 554 KVWDLRSSNQHVSFVK-HSSIVYSLSFS-YDNKILVSGGADTDVNFWDLTYRNNLSDGEQ 611
Query: 240 MTITTEF 246
+ F
Sbjct: 612 SPLLFNF 618
>Hs13629793 [A] KOG0265 U5 snRNP-specific protein-like factor and related
proteins
Length = 357
Score = 55.8 bits (133), Expect = 4e-07
Identities = 55/240 (22%), Positives = 90/240 (36%), Gaps = 28/240 (11%)
Query: 101 SSSKAVEHVLHGHFRAITDINFHPLQPEILATSSIDTYALAWDMRSPKKPYFRTSNWRSG 160
SS +A +L GH + FHP LA++ D L W++ Y
Sbjct: 53 SSLQAPIMLLSGHEGEVYCCKFHP-NGSTLASAGFDRLILLWNVYGDCDNYATLKGHSGA 111
Query: 161 AAQVKWNHKNSNVLATSHSNIVYVWDVRKGTSPLSVLEGHSGSVNSIDFNPFNETEIMSS 220
++ +N S + + S V VWD G + L+GH+ VNS + +
Sbjct: 112 VMELHYNTDGSMLFSASTDKTVAVWDSETGER-VKRLKGHTSFVNSCYPARRGPQLVCTG 170
Query: 221 GNDGTVKFWDYNKVEDELQMTITTEFPVWRGRYLPFGDGYCIMPMIGGNNSVYLANSFHD 280
+DGTVK WD K + F + Y ++ + + S + + D
Sbjct: 171 SDDGTVKLWDIRK----------------KAAIQTFQNTYQVLAVTFNDTSDQIISGGID 214
Query: 281 SGNSESRTTKLQPTYVFKGHTDRVTDFLWRSRHSQNTIIDDREFQLVTWSKDCDLRLWPV 340
+ + + TY +GH D VT S S L++ + D +R+W V
Sbjct: 215 NDIKVWDLRQNKLTYTMRGHADSVTGLSLSSEGS----------YLLSNAMDNTVRVWDV 264
Score = 53.5 bits (127), Expect = 2e-06
Identities = 36/136 (26%), Positives = 67/136 (48%), Gaps = 13/136 (9%)
Query: 95 VWNLSRSSSKAVEHVLHGHFRAITDINFHPLQPEILATSSIDTYALAWDMR--SPKKPYF 152
VW+L ++ + + + GH ++T ++ + L ++++D WD+R +PK+
Sbjct: 219 VWDLRQNK---LTYTMRGHADSVTGLSLSS-EGSYLLSNAMDNTVRVWDVRPFAPKERCV 274
Query: 153 R-----TSNWRSGAAQVKWNHKNSNVLATSHSNIVYVWDVRKGTSPLSVLEGHSGSVNSI 207
+ N+ + W+ S + A S VYVWD L L GH+GS+N +
Sbjct: 275 KIFQGNVHNFEKNLLRCSWSPDGSKIAAGSADRFVYVWDT-TSRRILYKLPGHAGSINEV 333
Query: 208 DFNPFNETEIMSSGND 223
F+P +E I+S+ +D
Sbjct: 334 AFHP-DEPIIISASSD 348
>At2g43770 [A] KOG0265 U5 snRNP-specific protein-like factor and related
proteins
Length = 343
Score = 55.5 bits (132), Expect = 5e-07
Identities = 49/205 (23%), Positives = 77/205 (36%), Gaps = 18/205 (8%)
Query: 101 SSSKAVEHVLHGHFRAITDINFHPLQPEILATSSIDTYALAWDMRSPKKPYFRTSNWRSG 160
SS +A +L GH A+ + F+P ++A+ S D W + K + ++
Sbjct: 40 SSLEAPIMLLSGHPSAVYTMKFNPAGT-LIASGSHDREIFLWRVHGDCKNFMVLKGHKNA 98
Query: 161 AAQVKWNHKNSNVLATSHSNIVYVWDVRKGTSPLSVLEGHSGSVNSIDFNPFNETEIMSS 220
+ W S +++ S V WDV G + E HS VNS I+S
Sbjct: 99 ILDLHWTSDGSQIVSASPDKTVRAWDVETGKQIKKMAE-HSSFVNSCCPTRRGPPLIISG 157
Query: 221 GNDGTVKFWDYNKVEDELQMTITTEFPVWRGRYLPFGDGYCIMPMIGGNNSVYLANSFHD 280
+DGT K WD + RG F D Y I + + + + D
Sbjct: 158 SDDGTAKLWDMRQ----------------RGAIQTFPDKYQITAVSFSDAADKIFTGGVD 201
Query: 281 SGNSESRTTKLQPTYVFKGHTDRVT 305
+ K + T +GH D +T
Sbjct: 202 NDVKVWDLRKGEATMTLEGHQDTIT 226
>YEL056w [B] KOG0264 Nucleosome remodeling factor subunit CAF1/NURF55/MSI1
Length = 401
Score = 55.1 bits (131), Expect = 6e-07
Identities = 33/126 (26%), Positives = 62/126 (49%), Gaps = 2/126 (1%)
Query: 113 HFRAITDINFHPLQPEILATSSIDTYALAWDMRSPKKPYFRTSNWRSGAAQVKWNHKNSN 172
H I D +H ++ T S D+ D+R+ T + ++H +SN
Sbjct: 207 HSDIINDNKWHNFNKDLFGTVSEDSLLKINDVRA-NNTTIDTVKCPQPFNTLAFSHHSSN 265
Query: 173 VLATSH-SNIVYVWDVRKGTSPLSVLEGHSGSVNSIDFNPFNETEIMSSGNDGTVKFWDY 231
+LA + + VY++D+R PL + GH +VN+++F+ + ++SSG+D + WD
Sbjct: 266 LLAAAGMDSYVYLYDLRNMKEPLHHMSGHEDAVNNLEFSTHVDGVVVSSGSDNRLMMWDL 325
Query: 232 NKVEDE 237
++ E
Sbjct: 326 KQIGAE 331
>SPBC8D2.20c [U] KOG0307 Vesicle coat complex COPII subunit SEC31
Length = 1224
Score = 55.1 bits (131), Expect = 6e-07
Identities = 35/123 (28%), Positives = 64/123 (51%), Gaps = 12/123 (9%)
Query: 120 INFHPLQPEILATSSIDTYALAWDMRSPKKPYFRTSNWRSGAAQ-VKWNHKNSNVLATSH 178
++F+ LQP +LA+ WD++ P++P+ RS V WN+K S++LA+ +
Sbjct: 123 LDFNRLQPNLLASGDNKGDVWVWDIKHPQQPFALPKQNRSSEVHVVSWNNKVSHILASGN 182
Query: 179 -SNIVYVWDVRKGTSPLSV-------LEGHSGSVNSIDFNPFNETEIMSSGNDG---TVK 227
+ VWDV+ L++ + +G+VNSI ++P N T + ++ +D +
Sbjct: 183 ATEYTTVWDVKLKRQVLNLSYLGAAGVSAATGAVNSIAWHPNNATRLATAIDDNRNPIIL 242
Query: 228 FWD 230
WD
Sbjct: 243 TWD 245
Score = 53.9 bits (128), Expect = 1e-06
Identities = 30/113 (26%), Positives = 56/113 (49%), Gaps = 11/113 (9%)
Query: 129 ILATSSIDTYALAWDMRSPKKPYFRTSNWRSGAA-------QVKWNHKNSNVLATS---- 177
ILA+ + Y WD++ ++ + +G + + W+ N+ LAT+
Sbjct: 177 ILASGNATEYTTVWDVKLKRQVLNLSYLGAAGVSAATGAVNSIAWHPNNATRLATAIDDN 236
Query: 178 HSNIVYVWDVRKGTSPLSVLEGHSGSVNSIDFNPFNETEIMSSGNDGTVKFWD 230
+ I+ WD+R+ T P ++L GH + S+ + P + T ++SSG DG W+
Sbjct: 237 RNPIILTWDLRQPTVPQNILTGHQKAALSLSWCPEDPTFLLSSGKDGRAMVWN 289
>Hs4758032 [U] KOG0276 Vesicle coat complex COPI beta' subunit
Length = 906
Score = 55.1 bits (131), Expect = 6e-07
Identities = 54/180 (30%), Positives = 78/180 (43%), Gaps = 14/180 (7%)
Query: 61 WLHH----LTSWEVAD--VQWCPHPAKHHWVISTSNQKAI-VWNLSRSSSKAVEHVLHGH 113
W H + ++EV D V+ A+ +WV++ ++ I V+N + H+ H
Sbjct: 42 WNHETQTLVKTFEVCDLPVRAAKFVARKNWVVTGADDMQIRVFNYNTLERV---HMFEAH 98
Query: 114 FRAITDINFHPLQPEILATSSIDTYALAWDMRSPKKPYFRTSNWRSGAAQVKWNHKNSNV 173
I I HP QP IL TSS D WD Q+ N K++N
Sbjct: 99 SDYIRCIAVHPTQPFIL-TSSDDMLIKLWDWDKKWSCSQVFEGHTHYVMQIVINPKDNNQ 157
Query: 174 LAT-SHSNIVYVWDVRKGTSPLSVLEGHSGSVNSIDFNPFNETEIMSSG-NDGTVKFWDY 231
A+ S + VW + +SP LEGH VN ID+ + + SG +D VK WDY
Sbjct: 158 FASASLDRTIKVWQLGS-SSPNFTLEGHEKGVNCIDYYSGGDKPYLISGADDRLVKIWDY 216
>At4g15900 [A] KOG0285 Pleiotropic regulator 1
Length = 486
Score = 55.1 bits (131), Expect = 6e-07
Identities = 40/149 (26%), Positives = 66/149 (43%), Gaps = 8/149 (5%)
Query: 81 KHHWVISTSNQKAI-VWNLSRSSSKAVEHVLHGHFRAITDINFHPLQPEILATSSIDTYA 139
+H ++ S + K + W+L ++ V HGH + + HP ++L T D+
Sbjct: 229 RHTYMFSAGDDKQVKCWDLEQNK---VIRSYHGHLSGVYCLALHPTL-DVLLTGGRDSVC 284
Query: 140 LAWDMRSPKKPYFRTSNWRSGAAQVKWNHKNSNVLATSHSNIVYVWDVRKGTSPLSVLEG 199
WD+R+ K F S + V + V+ SH + WD+R G + +S L
Sbjct: 285 RVWDIRT-KMQIFALSGHDNTVCSVFTRPTDPQVVTGSHDTTIKFWDLRYGKT-MSTLTH 342
Query: 200 HSGSVNSIDFNPFNETEIMSSGNDGTVKF 228
H SV ++ +P E S+ D T KF
Sbjct: 343 HKKSVRAMTLHP-KENAFASASADNTKKF 370
>At1g20540 [S] KOG1007 WD repeat protein TSSC1 WD repeat superfamily
Length = 379
Score = 55.1 bits (131), Expect = 6e-07
Identities = 38/148 (25%), Positives = 70/148 (46%), Gaps = 7/148 (4%)
Query: 85 VISTSNQKAIVWNL--SRSSSKAVEHVLHGHFRAITDINFHPLQPEILATSSIDTYALAW 142
+IS Q +W+L S+ S++ + G +++ + P +A + ++ W
Sbjct: 165 LISIDEQNIFLWSLDCSKKSAEVLSKDSAGMLHSLSGGAWDPHDVNAVAATG-ESSVQFW 223
Query: 143 DMRSPKKPYFRTSNWRSGAAQVKWNHKNSNVLATSHSNI-VYVWDVRKGTSPLSVLEGHS 201
D+R+ KK S + V +N K ++L T+ ++VWD+RK P+ L GH+
Sbjct: 224 DLRTMKKV---NSIEHAHVRGVDYNPKREHILVTAEDESGIHVWDLRKAKVPVQELPGHT 280
Query: 202 GSVNSIDFNPFNETEIMSSGNDGTVKFW 229
++ NP + I+S+G D V W
Sbjct: 281 HWTWAVRCNPEYDGLILSAGTDSVVNLW 308
>7298053 [U] KOG0276 Vesicle coat complex COPI beta' subunit
Length = 860
Score = 55.1 bits (131), Expect = 6e-07
Identities = 39/155 (25%), Positives = 72/155 (46%), Gaps = 9/155 (5%)
Query: 78 HPAKHHWVISTSNQKAIVWNLSRSSSKAVEHVLHGHFRAITDINFHPLQPEILATSSIDT 137
HP + + S+ + +WN + A + V GH + I F+P A++S+D
Sbjct: 79 HPTQPLVLTSSDDMLIKLWNWEKMW--ACQRVFEGHTHYVMQIVFNPKDNNTFASASLDR 136
Query: 138 YALAWDMRSPKKPYFRTSNWRSGAAQVKWNHKNSN--VLATSHSNIVYVWDVRKGTSPLS 195
W + S F G V + H +++ + +V +WD + T +
Sbjct: 137 TVKVWQLGS-NFANFTLEGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQNKTC-VQ 194
Query: 196 VLEGHSGSVNSIDFNPFNETEIMSSGN-DGTVKFW 229
LEGH+ +++++ F+P E I+ +G+ DGTV+ W
Sbjct: 195 TLEGHAQNISAVCFHP--ELPIVLTGSEDGTVRIW 227
>SPCC5E4.03c [K] KOG0263 Transcription initiation factor TFIID subunit TAF5
(also component of histone acetyltransferase SAGA)
Length = 643
Score = 54.7 bits (130), Expect = 8e-07
Identities = 43/175 (24%), Positives = 77/175 (43%), Gaps = 15/175 (8%)
Query: 79 PAKHHWVISTSNQKAIVWNLSRSSSKAVEHVLHGHFRAITDINFHPLQPEILATSSIDTY 138
P H++ ++ +Q A +W+ V GH + + FHP +L SS T
Sbjct: 431 PFGHYFATASHDQTAQLWSCDHIYPL---RVFAGHLSDVDCVTFHPNSAYVLTGSSDKTC 487
Query: 139 ALAWDMRSPKKPYFRTSNWRSGAAQVKWNHKNSNVLATSHSN-IVYVWDVRKGTSPLSVL 197
L WD+ R N + + + +A++ S ++++WD+ G + +
Sbjct: 488 RL-WDVHRGHS--VRVFNGHTQPVTAVAIAPDGHTMASADSEGLIHLWDIGTGRR-IKTM 543
Query: 198 EGHSGSVNSIDFNPFNETEIMSSGNDGTVKFWDY------NKVEDELQMTITTEF 246
GH G++ S+ F+ T ++S G+D TV+ WD N V L ++ T F
Sbjct: 544 RGHRGNIYSLSFSR-ESTVLVSGGSDCTVRAWDVFKTNYNNPVSSSLTGSVVTPF 597
>CE21113 [A] KOG0284 Polyadenylation factor I complex subunit PFS2
Length = 809
Score = 54.7 bits (130), Expect = 8e-07
Identities = 41/181 (22%), Positives = 82/181 (44%), Gaps = 8/181 (4%)
Query: 79 PAKHHWVISTSNQKAIVWNLSRSSSKAVEHVLHGHFRAITDINFHPLQPEILATSSIDTY 138
P + ++ + A VW+ +R + E VL GH + I++HP + ++AT S DT
Sbjct: 227 PTDVKFATASDDGTARVWDFARYTE---ERVLRGHGAEVRCIDWHPTKG-LIATGSRDTQ 282
Query: 139 --ALAWDMRSPKKPYFRTSNWRSGAAQVKWNHKNSNVLATSHSNIVYVWDVRKGTSPLSV 196
WD +S +S V++N + +L ++V ++D+R +
Sbjct: 283 QPVKIWDPKSGSC-LATLQEHKSSVMAVEFNKNGNWLLTGGRDHLVKMYDIRM-MKEMRT 340
Query: 197 LEGHSGSVNSIDFNPFNETEIMSSGNDGTVKFWDYNKVEDELQMTITTEFPVWRGRYLPF 256
H V S+ ++P +E +S G DG++ +W + ++ + + +W ++ P
Sbjct: 341 YRAHKKEVISLAWHPIHEGLFVSGGGDGSIVYWMVDGEKEIGLLEHAHDQAIWSMKWHPL 400
Query: 257 G 257
G
Sbjct: 401 G 401
>At4g02730 [R] KOG0266 WD40 repeat-containing protein
Length = 333
Score = 54.7 bits (130), Expect = 8e-07
Identities = 48/202 (23%), Positives = 95/202 (46%), Gaps = 27/202 (13%)
Query: 70 VADVQWCPHPAKHHWVISTSNQKAI-VWNLSRSSSKAVEHVLHGHFRAITDINFHPLQPE 128
++D+ W + H+ S S+ + +W+ +RS + ++ VL GH + +NF+P
Sbjct: 88 ISDLAWS---SDSHYTCSASDDCTLRIWD-ARSPYECLK-VLRGHTNFVFCVNFNP-PSN 141
Query: 129 ILATSSIDTYALAWDMRSPKKPYFRTSNWRSGAAQVKWNHKNSNVLATSHSNIVYVWDVR 188
++ + S D W++++ K ++ + V +N S +++ SH +WD +
Sbjct: 142 LIVSGSFDETIRIWEVKTGKCVRMIKAH-SMPISSVHFNRDGSLIVSASHDGSCKIWDAK 200
Query: 189 KGTSPLSVLEGHSGSVNSIDFNPFNETEIMSSGNDGTVKFWDY-------------NKVE 235
+GT ++++ S +V+ F+P N I+ + D T+K +Y NKV
Sbjct: 201 EGTCLKTLIDDKSPAVSFAKFSP-NGKFILVATLDSTLKLSNYATGKFLKVYTGHTNKV- 258
Query: 236 DELQMTITTEFPVWRGRYLPFG 257
IT+ F V G+Y+ G
Sbjct: 259 ----FCITSAFSVTNGKYIVSG 276
Score = 53.1 bits (126), Expect = 2e-06
Identities = 33/121 (27%), Positives = 57/121 (46%), Gaps = 3/121 (2%)
Query: 110 LHGHFRAITDINFHPLQPEILATSSIDTYALAWDMRSPKKPYFRTSNWRSGAAQVKWNHK 169
L GH AI+ + F +LA++S+D + W + + R SG + + W+
Sbjct: 39 LEGHTAAISCVKFSN-DGNLLASASVDKTMILWSATNYSLIH-RYEGHSSGISDLAWSSD 96
Query: 170 NSNVLATSHSNIVYVWDVRKGTSPLSVLEGHSGSVNSIDFNPFNETEIMSSGNDGTVKFW 229
+ + S + +WD R L VL GH+ V ++FNP + I+S D T++ W
Sbjct: 97 SHYTCSASDDCTLRIWDARSPYECLKVLRGHTNFVFCVNFNPPSNL-IVSGSFDETIRIW 155
Query: 230 D 230
+
Sbjct: 156 E 156
>7301796 [A] KOG0272 U4/U6 small nuclear ribonucleoprotein Prp4 (contains
WD40 repeats)
Length = 436
Score = 54.7 bits (130), Expect = 8e-07
Identities = 39/148 (26%), Positives = 69/148 (46%), Gaps = 6/148 (4%)
Query: 93 AIVWNLSRSSSKAVEHVLHGHFRAITDINFHPLQPEILATSSIDTYALAWDMRSPKKPYF 152
A VW+ + S +GH + FHP+ + +AT+S+D A +D+ + +
Sbjct: 175 AKVWSATSGQSLCT---FYGHTAELVAAEFHPVDGKSIATASLDGSARIYDVETSHELQQ 231
Query: 153 RTSNWRSGAAQVKWNHKNSNVLATSHSNIVYVWDVRKGTSPLSVLEGHSGSVNSIDFNPF 212
T + A ++N +L S + +WDVR S L GHS +++ +N F
Sbjct: 232 LTHHGAEVIA-ARFNRDGQMLLTGSFDHSAAIWDVR-SKSLGHQLRGHSAELSNCVWN-F 288
Query: 213 NETEIMSSGNDGTVKFWDYNKVEDELQM 240
+ + I + D T + WD K++ EL +
Sbjct: 289 SGSLIATGSLDNTARIWDTRKLDQELYL 316
>CE28600 [S] KOG0281 Beta-TrCP (transducin repeats containing)/Slimb
proteins
Length = 665
Score = 54.3 bits (129), Expect = 1e-06
Identities = 42/153 (27%), Positives = 70/153 (45%), Gaps = 12/153 (7%)
Query: 85 VISTSNQKAIVWNLSRSSSKAVEHVLHGHFRAITDINFHPLQPEILATSSIDTYALAWDM 144
V + ++ VW++ + VL GH A+ ++F + ++S D W M
Sbjct: 316 VTCSKDRSIAVWDMVSPRDITIRRVLVGHRAAVNVVDF---DDRYIVSASGDRTIKVWSM 372
Query: 145 RSPKKPYFRT-SNWRSGAAQVKWNHKNSNVLATSHSNIVYVWDVRKGTSPLSVLEGHSGS 203
+ + + RT + R G A +++ + V++ S N + +WD+ G L VLEGH
Sbjct: 373 DTLE--FVRTLAGHRRGIACLQY--RGRLVVSGSSDNTIRLWDIHSGVC-LRVLEGHEEL 427
Query: 204 VNSIDFNPFNETEIMSSGNDGTVKFWDYNKVED 236
V I F+ E I+S DG +K WD D
Sbjct: 428 VRCIRFD---EKRIVSGAYDGKIKVWDLQAALD 457
>CE27713 [A] KOG0265 U5 snRNP-specific protein-like factor and related
proteins
Length = 331
Score = 54.3 bits (129), Expect = 1e-06
Identities = 40/140 (28%), Positives = 70/140 (49%), Gaps = 15/140 (10%)
Query: 95 VWNLSRSSSKAVEHVLHGHFRAITDINFHPLQPEILATSSIDTYALAWDMRSPKKPYFR- 153
VW++ R+ V +VL GH IT ++ L ++S+D ++WD+R P P R
Sbjct: 189 VWDMLRND---VRYVLSGHRDTITSLSVSH-NGNFLLSNSMDCSLMSWDIR-PFVPAQRL 243
Query: 154 -------TSNWRSGAAQVKWNHKNSNVLATSHSNIVYVWDVRKGTSPLSVLEGHSGSVNS 206
+ N+ + W+ +++ + A S VYVW+ K + + L GH GSVN
Sbjct: 244 VARYQGASHNFEKNLLKCGWSPRDNYITAGSADRFVYVWNA-KSRACVYKLPGHLGSVNC 302
Query: 207 IDFNPFNETEIMSSGNDGTV 226
+P + ++S+G+D T+
Sbjct: 303 TALHPTQQI-LLSAGSDKTI 321
>7296187 [S] KOG0271 Notchless-like WD40 repeat-containing protein
Length = 481
Score = 54.3 bits (129), Expect = 1e-06
Identities = 30/123 (24%), Positives = 53/123 (42%), Gaps = 6/123 (4%)
Query: 112 GHFRAITDINFHPLQPEILATSSIDTYALAWDMRSPKKPYFRTSNWRSGAAQVKWNHKNS 171
GH A+ +NF P LA+ S DT WD+ + + P+F + + V W
Sbjct: 110 GHAEAVVSLNFSP-DGAHLASGSGDTTVRLWDLNT-ETPHFTCTGHKQWVLCVSWAPDGK 167
Query: 172 NVLATSHSNIVYVWDVRKGTSPLSVLEGHSGSVNSIDFNPFNE----TEIMSSGNDGTVK 227
+ + + + +WD G L GH +N + + P++ ++ S+ DG +
Sbjct: 168 RLASGCKAGSIIIWDPETGQQKGRPLSGHKKHINCLAWEPYHRDPECRKLASASGDGDCR 227
Query: 228 FWD 230
WD
Sbjct: 228 IWD 230
>HsM6005894_2 [R] KOG4155 FOG: WD40 repeat
Length = 1191
Score = 53.9 bits (128), Expect = 1e-06
Identities = 59/222 (26%), Positives = 88/222 (39%), Gaps = 39/222 (17%)
Query: 130 LATSSIDTYALAWDMRSPKKPYFRTS------NWRSGAAQVKWNHKNSNVLATSHSNIVY 183
LAT D L WD+R+PK P S +W +G A W K++ +++ S V
Sbjct: 640 LATGGRDRSLLCWDVRTPKTPVLIHSFPACHRDWVTGCA---WT-KDNLLISCSSDGSVG 695
Query: 184 VWDVRKGTSPLSVLEGHSGSVNSIDFNPFNETEIMSSGNDGTVKFWDYNKVEDELQMTIT 243
+WD G L GH +V+++ E ++S DGT+K WD+ VE
Sbjct: 696 LWDPESG-QRLGQFLGHQSAVSAV---AAVEEHVVSVSRDGTLKVWDHQGVE-------L 744
Query: 244 TEFPVWRGRYLPFGDGYCIMPM----IGGNNSVYLANSFHDSGNSESRTTKLQPTYVFKG 299
T P G +C M G S L + + T P V +
Sbjct: 745 TSIPAHSGPI-----SHCAAAMEPRAAGQPGSELLVVTV----GLDGATRLWHPLLVCQT 795
Query: 300 HTDRVTDFLWRSRHSQNTIIDDREFQLVTWSKDCDLRLWPVP 341
HT L S + + + ++T S+D +RLW VP
Sbjct: 796 HT-----LLGHSGPVRAAAVSETSGLMLTASEDGSVRLWQVP 832
>Hs21536371_2 [R] KOG4155 FOG: WD40 repeat
Length = 1191
Score = 53.9 bits (128), Expect = 1e-06
Identities = 59/222 (26%), Positives = 88/222 (39%), Gaps = 39/222 (17%)
Query: 130 LATSSIDTYALAWDMRSPKKPYFRTS------NWRSGAAQVKWNHKNSNVLATSHSNIVY 183
LAT D L WD+R+PK P S +W +G A W K++ +++ S V
Sbjct: 640 LATGGRDRSLLCWDVRTPKTPVLIHSFPACHRDWVTGCA---WT-KDNLLISCSSDGSVG 695
Query: 184 VWDVRKGTSPLSVLEGHSGSVNSIDFNPFNETEIMSSGNDGTVKFWDYNKVEDELQMTIT 243
+WD G L GH +V+++ E ++S DGT+K WD+ VE
Sbjct: 696 LWDPESG-QRLGQFLGHQSAVSAV---AAVEEHVVSVSRDGTLKVWDHQGVE-------L 744
Query: 244 TEFPVWRGRYLPFGDGYCIMPM----IGGNNSVYLANSFHDSGNSESRTTKLQPTYVFKG 299
T P G +C M G S L + + T P V +
Sbjct: 745 TSIPAHSGPI-----SHCAAAMEPRAAGQPGSELLVVTV----GLDGATRLWHPLLVCQT 795
Query: 300 HTDRVTDFLWRSRHSQNTIIDDREFQLVTWSKDCDLRLWPVP 341
HT L S + + + ++T S+D +RLW VP
Sbjct: 796 HT-----LLGHSGPVRAAAVSETSGLMLTASEDGSVRLWQVP 832
>ECU03g1520 [DO] KOG0305 Anaphase promoting complex Cdc20 Cdh1 and Ama1
subunits
Length = 369
Score = 53.5 bits (127), Expect = 2e-06
Identities = 72/352 (20%), Positives = 134/352 (37%), Gaps = 51/352 (14%)
Query: 5 VGEGPYSSPTFGKSLSLRV-------------DGGFNAVSINPSGRDVVLASRKGLYVVD 51
+GE PY S G++L ++ F + I+ SG +V + GL+V +
Sbjct: 38 LGENPYLSTVEGRNLGPKIIIQPYRQLKTKSLPDDFYSSLIDWSGENVFFTADGGLFVHN 97
Query: 52 LDDPFSEPRWLHHLTSWEVADVQWCPHPAKHHWVISTSNQKAIVWNLSRSSSKAVEHVLH 111
S+ + L S+ V V+ P I+ ++ +L S K + H
Sbjct: 98 FFS--SKTLQICSLNSFGVTSVKCNPTTGS----IALGTSVGVMLSLDIGSLKMARYPFH 151
Query: 112 GHFRAITDINFHPLQPEILATSSIDTYALAWDMRSPKKPYFRTSNWRSGAAQVKWNHKNS 171
+ I + + T S D D+RS +K + R + +
Sbjct: 152 K-----SRIGVIESESTNVITGSRDRKIKITDLRS-EKAVATILHHRQEVCGLSISKDLR 205
Query: 172 NVLATSHSNIVYVWDVRKGTSPLSVLEGHSGSVNSIDFNPFNETEIMSSGN--DGTVKFW 229
+ + + N +Y++D R + PL H +V ++ ++P + ++S G D TVK W
Sbjct: 206 FLASGGNDNRLYIYDYRNLSHPLKQCSNHKAAVKAMSWSPLSPNLLISGGGTADKTVKLW 265
Query: 230 DYNKVEDELQMTITTEFPVWRGRYLPFGDGYCIMPMIGGNNSVYLANSFHDSGNSESRTT 289
D N + + R + +G C + + N + S H + R +
Sbjct: 266 DVNMINSSRSSSCLV-------RSVDYGSQICNLKWLKSNKIL----STHGYSKDDIRLS 314
Query: 290 KLQPTYV---FKGHTDRVTDFLWRSRHSQNTIIDDREFQLVTWSKDCDLRLW 338
++ + F GH +RV F + DD ++ V+ S D ++ W
Sbjct: 315 QMSSFKIERYFLGHKNRVIHF---------SCSDDEKY-FVSGSSDSNINFW 356
>At4g32551 [R] KOG0266 WD40 repeat-containing protein
Length = 930
Score = 53.5 bits (127), Expect = 2e-06
Identities = 30/118 (25%), Positives = 61/118 (51%), Gaps = 7/118 (5%)
Query: 112 GHFRAITDINFHPLQPEILATSSIDTYALAWDMRSPKKPYFRTSNWRSGAAQVKWNHKNS 171
GH +T ++FHP++ +++ + D W + + T ++ G+ Q+++ +
Sbjct: 733 GHSSMVTSLDFHPIKDDLICSCDNDNEIRYWSINNGS----CTRVYKGGSTQIRFQPRVG 788
Query: 172 NVLATSHSNIVYVWDVRKGTSPLSVLEGHSGSVNSIDFNPFNETEIMSSGNDGTVKFW 229
LA S +N+V V DV S L+GH+ +NS+ ++P + ++S ++ VK W
Sbjct: 789 KYLAASSANLVNVLDVETQAIRHS-LQGHANPINSVCWDP--SGDFLASVSEDMVKVW 843
>At1g52360 [U] KOG0276 Vesicle coat complex COPI beta' subunit
Length = 926
Score = 53.5 bits (127), Expect = 2e-06
Identities = 39/155 (25%), Positives = 72/155 (46%), Gaps = 9/155 (5%)
Query: 78 HPAKHHWVISTSNQKAIVWNLSRSSSKAVEHVLHGHFRAITDINFHPLQPEILATSSIDT 137
HP + + S+ + +W+ + A + GH + + F+P A++S+D
Sbjct: 108 HPTLPYVLSSSDDMLIKLWDWEKGW--ACTQIFEGHSHYVMQVTFNPKDTNTFASASLDR 165
Query: 138 YALAWDMRSPKKPYFRTSNWRSGAAQVKW--NHKNSNVLATSHSNIVYVWDVRKGTSPLS 195
W++ SP P F + G V + ++ S + VWD + S +
Sbjct: 166 TIKIWNLGSP-DPNFTLDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQT-KSCVQ 223
Query: 196 VLEGHSGSVNSIDFNPFNETEIMSSGN-DGTVKFW 229
LEGH+ +V+++ F+P E I+ +G+ DGTV+ W
Sbjct: 224 TLEGHTHNVSAVCFHP--ELPIIITGSEDGTVRIW 256
>At5g50230 [R] KOG0288 WD40 repeat protein TipD
Length = 515
Score = 53.1 bits (126), Expect = 2e-06
Identities = 24/66 (36%), Positives = 39/66 (58%), Gaps = 1/66 (1%)
Query: 168 HKNSNVLATSHSNIVYVWDVRKGTSPLSVLEGHSGSVNSIDFNPFNETEIMSSGNDGTVK 227
H N +V+A + SN ++VWDV G L GH+ V ++D + F+ ++S+ D T+K
Sbjct: 283 HDNKSVIAATSSNNLFVWDVSSGRVR-HTLTGHTDKVCAVDVSKFSSRHVVSAAYDRTIK 341
Query: 228 FWDYNK 233
WD +K
Sbjct: 342 LWDLHK 347
>At5g43920 [S] KOG0293 WD40 repeat-containing protein
Length = 523
Score = 53.1 bits (126), Expect = 2e-06
Identities = 30/95 (31%), Positives = 51/95 (53%), Gaps = 4/95 (4%)
Query: 142 WDMRSPKKPYFRTSNWRSGAAQVK--WNHKNSNVLAT-SHSNIVYVWDVRKGTSPLSVLE 198
WD+ K + S R ++ + +S+ +A+ S + VY+W++ K T PL VL
Sbjct: 424 WDLAGEWKQPLKFSGHRQSKYVIRSCFGGLDSSFIASGSEDSQVYIWNL-KNTKPLEVLS 482
Query: 199 GHSGSVNSIDFNPFNETEIMSSGNDGTVKFWDYNK 233
GHS +VN + +NP N + S+ +D T++ W K
Sbjct: 483 GHSMTVNCVSWNPKNPRMLASASDDQTIRIWGPGK 517
>At2g19540 [R] KOG0302 Ribosome Assembly protein
Length = 469
Score = 53.1 bits (126), Expect = 2e-06
Identities = 34/142 (23%), Positives = 64/142 (44%), Gaps = 5/142 (3%)
Query: 101 SSSKAVEHV-LHGHFRAITDINFHPLQPEILATSSIDTYALAWDMRSPKKPYFRTSNWRS 159
S S AV+ + GH ++ D+ + P + + A+ S+D WD+R K P +
Sbjct: 255 SGSWAVDPIPFAGHTASVEDLQWSPAEENVFASCSVDGSVAVWDIRLGKSPALSFKAHNA 314
Query: 160 GAAQVKWNHKNSNVLAT-SHSNIVYVWDVR---KGTSPLSVLEGHSGSVNSIDFNPFNET 215
+ WN S +LA+ S + D+R G + ++ E H + SI+++ +
Sbjct: 315 DVNVISWNRLASCMLASGSDDGTFSIRDLRLIKGGDAVVAHFEYHKHPITSIEWSAHEAS 374
Query: 216 EIMSSGNDGTVKFWDYNKVEDE 237
+ + D + WD + +DE
Sbjct: 375 TLAVTSGDNQLTIWDLSLEKDE 396
>CE29560 [S] KOG0300 WD40 repeat-containing protein
Length = 486
Score = 52.8 bits (125), Expect = 3e-06
Identities = 32/110 (29%), Positives = 50/110 (45%), Gaps = 5/110 (4%)
Query: 130 LATSSIDTYALAWDMRSPKKPYFRTSNWRSGAAQVKWNHKNSNVLATSHSNIVY-VWDVR 188
+ T+S D A WD+ K + H N ++ TS + + +WD R
Sbjct: 295 MVTASWDRTANVWDVE--KGEVVNILSGHESELNHCSTHSNQKLVLTSSKDSTFRLWDFR 352
Query: 189 KGTSPLSVLEGHSGSVNSIDFNPFNETEIMSSGNDGTVKFWDYNKVEDEL 238
+ ++V +GH SV S+ FN + I+SS +D TVK WD + L
Sbjct: 353 EAIQSVAVFQGHQDSVTSVSFN--TDYRIVSSSDDATVKIWDLRNMRTPL 400
>CE26861 [S] KOG0300 WD40 repeat-containing protein
Length = 484
Score = 52.8 bits (125), Expect = 3e-06
Identities = 32/110 (29%), Positives = 50/110 (45%), Gaps = 5/110 (4%)
Query: 130 LATSSIDTYALAWDMRSPKKPYFRTSNWRSGAAQVKWNHKNSNVLATSHSNIVY-VWDVR 188
+ T+S D A WD+ K + H N ++ TS + + +WD R
Sbjct: 293 MVTASWDRTANVWDVE--KGEVVNILSGHESELNHCSTHSNQKLVLTSSKDSTFRLWDFR 350
Query: 189 KGTSPLSVLEGHSGSVNSIDFNPFNETEIMSSGNDGTVKFWDYNKVEDEL 238
+ ++V +GH SV S+ FN + I+SS +D TVK WD + L
Sbjct: 351 EAIQSVAVFQGHQDSVTSVSFN--TDYRIVSSSDDATVKIWDLRNMRTPL 398
>At2g05720 [A] KOG0272 U4/U6 small nuclear ribonucleoprotein Prp4 (contains
WD40 repeats)
Length = 276
Score = 52.8 bits (125), Expect = 3e-06
Identities = 37/136 (27%), Positives = 58/136 (42%), Gaps = 24/136 (17%)
Query: 95 VWNLSRSSSKAVEHVLHGHFRAITDINFHPLQPEILATSSIDTYALAWDMRSPKKPYFRT 154
+W + + ++K V VL GH +TD+ F + E LAT+S D W F+
Sbjct: 89 LWEVPQVTNKIV--VLKGHKEHVTDVVFSSVDDECLATASTDRTEKIWKTDGTLLQTFKA 146
Query: 155 SNWRSGAAQVKWNHKNSNVLATSHSNIVYVWDVRKGTSPLSVLEGHSGSVNSIDFNPFNE 214
S + ++ VWD+R + L + +GH V S+DF+P N
Sbjct: 147 S--------------------SGFDSLARVWDLRTARNIL-IFQGHIKQVLSVDFSP-NG 184
Query: 215 TEIMSSGNDGTVKFWD 230
+ S G D + WD
Sbjct: 185 YHLASGGEDNQCRIWD 200
>At5g52820 [S] KOG0271 Notchless-like WD40 repeat-containing protein
Length = 473
Score = 52.4 bits (124), Expect = 4e-06
Identities = 32/123 (26%), Positives = 57/123 (46%), Gaps = 6/123 (4%)
Query: 112 GHFRAITDINFHPLQPEILATSSIDTYALAWDMRSPKKPYFRTSNWRSGAAQVKWNHKNS 171
GH A+ ++F P + LA+ S DT WD+ + + P F ++ V W+
Sbjct: 107 GHAEAVLCVSFSP-DGKQLASGSGDTTVRLWDLYT-ETPLFTCKGHKNWVLTVAWSPDGK 164
Query: 172 NVLATSHSNIVYVWDVRKGTSPLSVLEGHSGSVNSIDFNPFNET----EIMSSGNDGTVK 227
++++ S S + W+ +KG S L GH + I + P + + ++S DG +
Sbjct: 165 HLVSGSKSGEICCWNPKKGELEGSPLTGHKKWITGISWEPVHLSSPCRRFVTSSKDGDAR 224
Query: 228 FWD 230
WD
Sbjct: 225 IWD 227
>7303990 [U] KOG0307 Vesicle coat complex COPII subunit SEC31
Length = 1240
Score = 52.4 bits (124), Expect = 4e-06
Identities = 31/125 (24%), Positives = 63/125 (49%), Gaps = 8/125 (6%)
Query: 113 HFRAITDINFHPLQPEILATSSIDTYALAWDMRSPK---KPYFRTSNWRSGAAQVKWNHK 169
H A++ ++F+P Q +LA+ + ++ L WD+ +P+ P +T V WN +
Sbjct: 115 HTGAVSGLDFNPFQNNLLASCASESEILIWDLNNPETSMSPGTKTQPLED-VKNVAWNRQ 173
Query: 170 NSNVLATSHSNIVYVWDVRKGTSPLSVLEGHSG-SVNSIDFNPFNETEIMSSGNDG---T 225
++LA+ S +WD+RK + + + S ++I+++P T++ + D
Sbjct: 174 VQHILASVFSTRCVIWDLRKSQQIIKLSDSQSRVRWHAIEWHPEAATQVWLASEDDQAPV 233
Query: 226 VKFWD 230
V+ WD
Sbjct: 234 VQLWD 238
>7300706 [S] KOG0281 Beta-TrCP (transducin repeats containing)/Slimb
proteins
Length = 510
Score = 52.4 bits (124), Expect = 4e-06
Identities = 41/147 (27%), Positives = 71/147 (47%), Gaps = 12/147 (8%)
Query: 85 VISTSNQKAIVWNLSRSSSKAVEHVLHGHFRAITDINFHPLQPEILATSSIDTYALAWDM 144
V + ++ VW+++ S + VL GH A+ ++F + + ++S D W
Sbjct: 304 VTCSKDRSIAVWDMTSPSEITLRRVLVGHRAAVNVVDF---DEKYIVSASGDRTIKVWST 360
Query: 145 RSPKKPYFRTSN-WRSGAAQVKWNHKNSNVLATSHSNIVYVWDVRKGTSPLSVLEGHSGS 203
S + + RT N + G A ++ +++ V++ S N + +WD+ G L VLEGH
Sbjct: 361 SSCE--FVRTLNGHKRGIACLQ--YRDRLVVSGSSDNSIRLWDIECGAC-LRVLEGHEEL 415
Query: 204 VNSIDFNPFNETEIMSSGNDGTVKFWD 230
V I F+ I+S DG +K WD
Sbjct: 416 VRCI---RFDTKRIVSGAYDGKIKVWD 439
>Hs16306498 [S] KOG0281 Beta-TrCP (transducin repeats containing)/Slimb
proteins
Length = 508
Score = 52.0 bits (123), Expect = 5e-06
Identities = 40/153 (26%), Positives = 73/153 (47%), Gaps = 12/153 (7%)
Query: 85 VISTSNQKAIVWNLSRSSSKAVEHVLHGHFRAITDINFHPLQPEILATSSIDTYALAWDM 144
V + ++ VW+++ ++ + VL GH A+ ++F + + ++S D W
Sbjct: 300 VTCSKDRSIAVWDMASATDITLRRVLVGHRAAVNVVDF---DDKYIVSASGDRTIKVWST 356
Query: 145 RSPKKPYFRTSN-WRSGAAQVKWNHKNSNVLATSHSNIVYVWDVRKGTSPLSVLEGHSGS 203
+ + + RT N + G A ++ +++ V++ S N + +WD+ G L VLEGH
Sbjct: 357 STCE--FVRTLNGHKRGIACLQ--YRDRLVVSGSSDNTIRLWDIECGAC-LRVLEGHEEL 411
Query: 204 VNSIDFNPFNETEIMSSGNDGTVKFWDYNKVED 236
V I F+ I+S DG +K WD D
Sbjct: 412 VRCI---RFDNKRIVSGAYDGKIKVWDLQAALD 441
>Hs16306496 [S] KOG0281 Beta-TrCP (transducin repeats containing)/Slimb
proteins
Length = 529
Score = 52.0 bits (123), Expect = 5e-06
Identities = 40/153 (26%), Positives = 73/153 (47%), Gaps = 12/153 (7%)
Query: 85 VISTSNQKAIVWNLSRSSSKAVEHVLHGHFRAITDINFHPLQPEILATSSIDTYALAWDM 144
V + ++ VW+++ ++ + VL GH A+ ++F + + ++S D W
Sbjct: 321 VTCSKDRSIAVWDMASATDITLRRVLVGHRAAVNVVDF---DDKYIVSASGDRTIKVWST 377
Query: 145 RSPKKPYFRTSN-WRSGAAQVKWNHKNSNVLATSHSNIVYVWDVRKGTSPLSVLEGHSGS 203
+ + + RT N + G A ++ +++ V++ S N + +WD+ G L VLEGH
Sbjct: 378 STCE--FVRTLNGHKRGIACLQ--YRDRLVVSGSSDNTIRLWDIECGAC-LRVLEGHEEL 432
Query: 204 VNSIDFNPFNETEIMSSGNDGTVKFWDYNKVED 236
V I F+ I+S DG +K WD D
Sbjct: 433 VRCI---RFDNKRIVSGAYDGKIKVWDLQAALD 462
>Hs16306494 [S] KOG0281 Beta-TrCP (transducin repeats containing)/Slimb
proteins
Length = 542
Score = 52.0 bits (123), Expect = 5e-06
Identities = 40/153 (26%), Positives = 73/153 (47%), Gaps = 12/153 (7%)
Query: 85 VISTSNQKAIVWNLSRSSSKAVEHVLHGHFRAITDINFHPLQPEILATSSIDTYALAWDM 144
V + ++ VW+++ ++ + VL GH A+ ++F + + ++S D W
Sbjct: 334 VTCSKDRSIAVWDMASATDITLRRVLVGHRAAVNVVDF---DDKYIVSASGDRTIKVWST 390
Query: 145 RSPKKPYFRTSN-WRSGAAQVKWNHKNSNVLATSHSNIVYVWDVRKGTSPLSVLEGHSGS 203
+ + + RT N + G A ++ +++ V++ S N + +WD+ G L VLEGH
Sbjct: 391 STCE--FVRTLNGHKRGIACLQ--YRDRLVVSGSSDNTIRLWDIECGAC-LRVLEGHEEL 445
Query: 204 VNSIDFNPFNETEIMSSGNDGTVKFWDYNKVED 236
V I F+ I+S DG +K WD D
Sbjct: 446 VRCI---RFDNKRIVSGAYDGKIKVWDLQAALD 475
>7293188 [D] KOG0267 Microtubule severing protein katanin p80 subunit B
(contains WD40 repeats)
Length = 296
Score = 52.0 bits (123), Expect = 5e-06
Identities = 34/124 (27%), Positives = 57/124 (45%), Gaps = 3/124 (2%)
Query: 110 LHGHFRAITDINFHPLQPEILATSSIDTYALAWDMRSPKKPYFRTSNWRSGAAQVKWNHK 169
L GH R+I + F + + I WD+ S +K Y + + +N
Sbjct: 56 LTGHNRSIDCVRFAYKDNFVYSADDIGIIR-RWDLNS-QKIYSTLNGHMKSVRTLDFNPS 113
Query: 170 NSNVLATSHSNIVYVWDVRKGTSPLSVLEGHSGSVNSIDFNPFNETEIMSSGNDGTVKFW 229
V++ S+ V +WDV+ + + V GH VNS+ F+P + I S+G +G++ W
Sbjct: 114 GEYVVSGSNDTTVRLWDVQNENNCIKVCRGHMSHVNSVKFSP-DGLWIASAGLEGSILIW 172
Query: 230 DYNK 233
D K
Sbjct: 173 DIRK 176
>SPAC227.12 [A] KOG0272 U4/U6 small nuclear ribonucleoprotein Prp4 (contains
WD40 repeats)
Length = 462
Score = 51.6 bits (122), Expect = 7e-06
Identities = 35/125 (28%), Positives = 60/125 (48%), Gaps = 4/125 (3%)
Query: 110 LHGHFRAITDINFHPLQPEILATSSIDTYALAWDMRSPKKPYFRTSNWRSGAAQVKWNHK 169
L GH + + FHP + L ++S DT WD+ + + + + G +
Sbjct: 261 LEGHLARVGRVAFHP-SGDYLVSASFDTTWRLWDVHTGVELLMQEGH-SEGIFSIACQPD 318
Query: 170 NSNVLATSHSNIVYVWDVRKGTSPLSVLEGHSGSVNSIDFNPFNETEIMSSGNDGTVKFW 229
S V + + I +WD+R G S + VL+ H + ++ ++P N ++ +S D TVK W
Sbjct: 319 GSLVSSGGNDAIGRIWDLRSGKS-IMVLDEHIRQIVAMAWSP-NGYQLATSSADDTVKIW 376
Query: 230 DYNKV 234
D KV
Sbjct: 377 DLRKV 381
>CE03924 [Z] KOG0318 WD40 repeat stress protein/actin interacting protein
Length = 611
Score = 51.6 bits (122), Expect = 7e-06
Identities = 44/158 (27%), Positives = 71/158 (44%), Gaps = 16/158 (10%)
Query: 86 ISTSNQKAIVWNLSRSSSKAVEHVLHGHFRAITDINFHPLQPEILATSSIDTYALAWDMR 145
++ SN K V + SK + L G + HP + +A S+ + +A D
Sbjct: 454 VALSNDKQFV-AVGGQDSKVHVYKLSGASVSEVKTIVHPAEITSVAFSNNGAFLVATDQS 512
Query: 146 SPKKPYF--------RTSNWRSGAAQV---KWNHKNSNVLATSHSNIVYVWDVRKGTS-P 193
PY T++W A+V W+ N + S N V VW++ K + P
Sbjct: 513 RKVIPYSVANNFELAHTNSWTFHTAKVACVSWSPDNVRLATGSLDNSVIVWNMNKPSDHP 572
Query: 194 LSVLEGHS-GSVNSIDFNPFNETEIMSSGNDGTVKFWD 230
+ + H+ SVNS+ + NET I+S+G D +KFW+
Sbjct: 573 IIIKGAHAMSSVNSVIW--LNETTIVSAGQDSNIKFWN 608
>At5g24520 [S] KOG0290 Conserved WD40 repeat-containing protein AN11
Length = 341
Score = 51.6 bits (122), Expect = 7e-06
Identities = 37/140 (26%), Positives = 67/140 (47%), Gaps = 9/140 (6%)
Query: 95 VWNLSRSSSKAVEHVLHGHFRAITDINFHPLQPEILATSSIDTYALAWDMRSPKKP--YF 152
+W++ +S VE L H + + DI + + + A+ S D +D+R + +
Sbjct: 159 IWDIEKS---VVETQLIAHDKEVHDIAWG--EARVFASVSADGSVRIFDLRDKEHSTIIY 213
Query: 153 RTSNWRSGAAQVKWNHKNSNVLAT--SHSNIVYVWDVRKGTSPLSVLEGHSGSVNSIDFN 210
+ + ++ WN ++ +AT SN V + D+R T P++ LE H SVN+I +
Sbjct: 214 ESPQPDTPLLRLAWNKQDLRYMATILMDSNKVVILDIRSPTMPVAELERHQASVNAIAWA 273
Query: 211 PFNETEIMSSGNDGTVKFWD 230
P + I S G+D W+
Sbjct: 274 PQSCKHICSGGDDTQALIWE 293
>At1g79990 [U] KOG0276 Vesicle coat complex COPI beta' subunit
Length = 913
Score = 51.6 bits (122), Expect = 7e-06
Identities = 38/155 (24%), Positives = 70/155 (44%), Gaps = 9/155 (5%)
Query: 78 HPAKHHWVISTSNQKAIVWNLSRSSSKAVEHVLHGHFRAITDINFHPLQPEILATSSIDT 137
HP + + S+ + +W+ + + GH + + F+P A++S+D
Sbjct: 101 HPTLPYVLSSSDDMLIKLWDWEKGW--LCTQIFEGHSHYVMQVTFNPKDTNTFASASLDR 158
Query: 138 YALAWDMRSPKKPYFRTSNWRSGAAQVKW--NHKNSNVLATSHSNIVYVWDVRKGTSPLS 195
W++ SP P F G V + ++ S + VWD + S +
Sbjct: 159 TIKIWNLGSP-DPNFTLDAHLKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQT-KSCVQ 216
Query: 196 VLEGHSGSVNSIDFNPFNETEIMSSGN-DGTVKFW 229
LEGH+ +V+++ F+P E I+ +G+ DGTV+ W
Sbjct: 217 TLEGHTHNVSAVSFHP--ELPIIITGSEDGTVRIW 249
>7293972 [A] KOG0272 U4/U6 small nuclear ribonucleoprotein Prp4 (contains
WD40 repeats)
Length = 553
Score = 51.6 bits (122), Expect = 7e-06
Identities = 37/121 (30%), Positives = 56/121 (45%), Gaps = 5/121 (4%)
Query: 110 LHGHFRAITDINFHPLQPEILATSSIDTYALAWDMRSPKKPYFRTSNWRSGAAQVKWNHK 169
L GH A+ ++F P I AT S D WD+R ++P + + + VK+ +
Sbjct: 433 LEGHLGAVFGVDFSPNGFHI-ATGSQDNTCKIWDLRR-RQPVYTIPAHTNLISDVKYQQE 490
Query: 170 NSNVLAT-SHSNIVYVWDVRKGTSPLSVLEGHSGSVNSIDFNPFNETEIMSSGNDGTVKF 228
+ L T S+ + +W K PL L+GH V S+D P N I ++ D T K
Sbjct: 491 CGSFLVTCSYDSTTKIWS-NKTWQPLKTLQGHDNKVISVDIAP-NSQYIATTSFDRTFKL 548
Query: 229 W 229
W
Sbjct: 549 W 549
>YCR072c [S] KOG0271 Notchless-like WD40 repeat-containing protein
Length = 515
Score = 51.2 bits (121), Expect = 9e-06
Identities = 38/141 (26%), Positives = 57/141 (39%), Gaps = 16/141 (11%)
Query: 98 LSRSSSKAVEHVLHGHFRAITDINFHPLQPEILATSSIDTYALAWDM--RSPKKPYFRTS 155
++RSSS + GH I F P + T + D A WD ++P
Sbjct: 132 VTRSSS-----AIAGHGSTILCSAFAPHTSSRMVTGAGDNTARIWDCDTQTPMHTLKGHY 186
Query: 156 NWRSGAAQVKWNHKNSNVLATSHSNIVYVWDVRKGTSPLSVLEGHSGSVNSIDFNPF--- 212
NW V W+ + S N + +WD + G L GHS + S+ + P
Sbjct: 187 NW---VLCVSWSPDGEVIATGSMDNTIRLWDPKSGQCLGDALRGHSKWITSLSWEPIHLV 243
Query: 213 ---NETEIMSSGNDGTVKFWD 230
++ + SS DGT+K WD
Sbjct: 244 KPGSKPRLASSSKDGTIKIWD 264
>Hs4502477 [S] KOG0281 Beta-TrCP (transducin repeats containing)/Slimb
proteins
Length = 569
Score = 51.2 bits (121), Expect = 9e-06
Identities = 39/147 (26%), Positives = 72/147 (48%), Gaps = 12/147 (8%)
Query: 85 VISTSNQKAIVWNLSRSSSKAVEHVLHGHFRAITDINFHPLQPEILATSSIDTYALAWDM 144
V + ++ VW+++ + + VL GH A+ ++F + + ++S D W+
Sbjct: 361 VTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDF---DDKYIVSASGDRTIKVWNT 417
Query: 145 RSPKKPYFRTSN-WRSGAAQVKWNHKNSNVLATSHSNIVYVWDVRKGTSPLSVLEGHSGS 203
+ + + RT N + G A ++ +++ V++ S N + +WD+ G L VLEGH
Sbjct: 418 STCE--FVRTLNGHKRGIACLQ--YRDRLVVSGSSDNTIRLWDIECGAC-LRVLEGHEEL 472
Query: 204 VNSIDFNPFNETEIMSSGNDGTVKFWD 230
V I F+ I+S DG +K WD
Sbjct: 473 VRCI---RFDNKRIVSGAYDGKIKVWD 496
>Hs16117783 [S] KOG0281 Beta-TrCP (transducin repeats containing)/Slimb
proteins
Length = 605
Score = 51.2 bits (121), Expect = 9e-06
Identities = 39/147 (26%), Positives = 72/147 (48%), Gaps = 12/147 (8%)
Query: 85 VISTSNQKAIVWNLSRSSSKAVEHVLHGHFRAITDINFHPLQPEILATSSIDTYALAWDM 144
V + ++ VW+++ + + VL GH A+ ++F + + ++S D W+
Sbjct: 397 VTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDF---DDKYIVSASGDRTIKVWNT 453
Query: 145 RSPKKPYFRTSN-WRSGAAQVKWNHKNSNVLATSHSNIVYVWDVRKGTSPLSVLEGHSGS 203
+ + + RT N + G A ++ +++ V++ S N + +WD+ G L VLEGH
Sbjct: 454 STCE--FVRTLNGHKRGIACLQ--YRDRLVVSGSSDNTIRLWDIECGAC-LRVLEGHEEL 508
Query: 204 VNSIDFNPFNETEIMSSGNDGTVKFWD 230
V I F+ I+S DG +K WD
Sbjct: 509 VRCI---RFDNKRIVSGAYDGKIKVWD 532
>CE11748 [R] KOG0266 WD40 repeat-containing protein
Length = 395
Score = 51.2 bits (121), Expect = 9e-06
Identities = 54/247 (21%), Positives = 101/247 (40%), Gaps = 34/247 (13%)
Query: 85 VISTSNQKAIVWNLSRSSSKAVEHVLHGHFRAITDINFHPLQPEILATSSIDTYALAWDM 144
++S S+ K +V SS + V+ L GH + F+P ++A+ S D W
Sbjct: 163 IVSCSDDK-LVKVFDVSSGRCVK-TLKGHTNYVFCCCFNP-SGTLIASGSFDETIRIWCA 219
Query: 145 RSPKKPYFRTSNWRSGAAQVKWNHKNSNVLATSHSNIVYVWDVRKGTSPLSVLEGHSGSV 204
R+ F + V +N + + + S+ IV +WD GT ++++ +
Sbjct: 220 RNGNT-IFSIPGHEDPVSSVCFNRDGAYLASGSYDGIVRIWDSTTGTCVKTLIDEEHPPI 278
Query: 205 NSIDFNPFNETEIMSSGNDGTVKFWDYNKV--------EDELQMTITTEFPVWRGRYLPF 256
+ F+P N I++S + T+K WDY K+ + + + F V G+++
Sbjct: 279 THVKFSP-NGKYILASNLNNTLKLWDYQKLRVLKEYTGHENSKYCVAANFSVTGGKWIVS 337
Query: 257 GDG----YC-------IMPMIGGNNSVYLANSFHDSGNSESRTTKLQPTYVFKGHTDRVT 305
G Y I+ + G+N+ + H G + + L+P K
Sbjct: 338 GSEDHKVYIWNLQTREILQTLDGHNTAVMCTDCH-PGQNIIASAALEPDMRIK------- 389
Query: 306 DFLWRSR 312
+WRS+
Sbjct: 390 --IWRSQ 394
>At5g54520 [S] KOG0282 mRNA splicing factor
Length = 404
Score = 51.2 bits (121), Expect = 9e-06
Identities = 31/122 (25%), Positives = 59/122 (47%), Gaps = 3/122 (2%)
Query: 110 LHGHFRAITDINFHPLQPEILATSSIDTYALAWDMRSPKKPYFRT-SNWRSGAAQVKWNH 168
L GH +A+T I++ +LA++ +D W++ S K R + + VKW+
Sbjct: 103 LTGHTKAVTAIDWSTSHVHLLASAGLDGAVYVWNVWSNDKKKVRAFLHHNAPVKDVKWSK 162
Query: 169 KNSNVLATSHSNIVYVWDVRKGTSPLSVLEGHSGSVNSIDFNPFNETEIMSSGNDGTVKF 228
+ ++L+ + ++DV +G S E V + F+P N +S G+ G+++
Sbjct: 163 QGLSLLSCGYDCTSRLFDVERGVETQSFKEDE--VVGVVKFHPDNCNVFLSGGSKGSLRL 220
Query: 229 WD 230
WD
Sbjct: 221 WD 222
>7300980 [R] KOG4155 FOG: WD40 repeat
Length = 743
Score = 51.2 bits (121), Expect = 9e-06
Identities = 41/165 (24%), Positives = 74/165 (44%), Gaps = 15/165 (9%)
Query: 75 WC--PHPAKHHWVISTSNQKAIVWNLSRSSSKAVEHVL---HGHFRAITDINFHPLQPEI 129
WC P + V + + A +W+L + EH L GH + + + FHP
Sbjct: 543 WCLDESPVGQYVVTGSKDLSARLWSLEK------EHALIIYAGHTQDVECVAFHP-NGNY 595
Query: 130 LATSSIDTYALAWDMRSPKKPYFRTSNWRSGAAQVKWNHKNSNVLATSHSNIVYVWDVRK 189
+AT S D W S K ++ R Q+ ++ + A V ++D+
Sbjct: 596 IATGSADHSVRLWCATSGKLMRV-FADCRQAVTQLAFSPDGKMLAAAGEETKVRIFDLAA 654
Query: 190 GTSPLSVLEGHSGSVNSIDFNPFNETEIMSSGNDGTVKFWDYNKV 234
G L+ L+ HS S++S+ ++ N + ++ +DGT++ WD K+
Sbjct: 655 GAQ-LAELKDHSASISSLSWSTHNR-HLATACSDGTLRLWDIKKL 697
Database: KOG eukaryal database 04/03
Posted date: Apr 14, 2003 1:07 PM
Number of letters in database: 30,389,216
Number of sequences in database: 60,738
Lambda K H
0.318 0.135 0.419
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 70,978,282
Number of Sequences: 60738
Number of extensions: 3195975
Number of successful extensions: 10380
Number of sequences better than 1.0e-05: 111
Number of HSP's better than 0.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 107
Number of HSP's that attempted gapping in prelim test: 9728
Number of HSP's gapped (non-prelim): 433
length of query: 1133
length of database: 30,389,216
effective HSP length: 117
effective length of query: 1016
effective length of database: 23,282,870
effective search space: 23655395920
effective search space used: 23655395920
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)