ORF STATUS Function Best COG Functional category Pathways and functional systems
r_klactVI5296 good L KOG2475 Replication, recombination and repair CDC45 (cell division cycle 45)-like protein
Only best alignment is shown:
BLASTP 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= r_klactVI5296 1837009 1835018 -664
(664 letters)
Database: KOG eukaryal database 04/03
60,738 sequences; 30,389,216 total letters
Searching..................................................done
Color Key for Alignment Scores: 
Score E
Sequences producing significant alignments: (bits) Value
YLR103c [L] KOG2475 CDC45 (cell division cycle 45)-like protein 802 0.0
SPAC17D4.02 [L] KOG2475 CDC45 (cell division cycle 45)-like protein 326 6e-89
7290114 [L] KOG2475 CDC45 (cell division cycle 45)-like protein 160 8e-39
At3g25100 [L] KOG2475 CDC45 (cell division cycle 45)-like protein 122 1e-27
Hs4502713 [L] KOG2475 CDC45 (cell division cycle 45)-like protein 111 3e-24
CE01570 [L] KOG2475 CDC45 (cell division cycle 45)-like protein 51 6e-06
>YLR103c [L] KOG2475 CDC45 (cell division cycle 45)-like protein
Length = 650
Score = 802 bits (2072), Expect = 0.0
Identities = 411/669 (61%), Positives = 505/669 (75%), Gaps = 24/669 (3%)
Query: 1 MYIGIAEFVGAYDKILHRCSSHSSCQLVIFVSCLNIDALCASKMLSSLFKKQLVQSQLVP 60
MY GI++F AY+KIL SSHSSCQLVIFVSCLNIDALCA+KMLS LFKKQLVQSQ+VP
Sbjct: 1 MYYGISQFSEAYNKILRNSSSHSSCQLVIFVSCLNIDALCATKMLSLLFKKQLVQSQIVP 60
Query: 61 VFGYSELKDHYQRLDENINSVIFVGCGGMVDLESFLEIDPQENTQGPLDEIQLDKTDVVQ 120
+FGYSEL+ HY +LD+NINS++ VG GG++DLE+FLEIDPQE I D+ Q
Sbjct: 61 IFGYSELRRHYSQLDDNINSLLLVGFGGVIDLEAFLEIDPQEYV------IDTDEKSGEQ 114
Query: 121 KFKKEIFVLDCHRPWNLDNLFGSQCITCFDDGTVEESLTEQKKAYYKLXXXXXXXXXXXX 180
F+++I+VLD HRPWNLDN+FGSQ I CFDDGTV+++L EQK+AYYKL
Sbjct: 115 SFRRDIYVLDAHRPWNLDNIFGSQIIQCFDDGTVDDTLGEQKEAYYKLLELDEESGDDEL 174
Query: 181 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVVLGKRSSDELNPK--KSHKQRKREFHNL 238
+ KR + + P KQRK++ H
Sbjct: 175 SGDENDNNGGDDEATDADEVTDEDEEDEDETIS-NKRGNSSIGPNDLSKRKQRKKQIHEY 233
Query: 239 EKVLQEYYSQGSTVLNSLSVQIYSLLSGIGETNLDYLWLCILGVSSLDNSFPLVYNRLLP 298
E VL+EYYSQG+TV+NS+S QIYSLLS IGETNL LWL ILG +SLD ++ VYNRL P
Sbjct: 234 EGVLEEYYSQGTTVVNSISAQIYSLLSAIGETNLSNLWLNILGTTSLDIAYAQVYNRLYP 293
Query: 299 LLKDEVKRLTPSEKT--KTPDSLNLEIRPDYSLFLLRHTSLYDSFYYSNYVNAKLSLWNE 356
LL+DEVKRLTPS + KTPD+L L I+PDY LFLLRH+SLYDSFYYSNYVNAKLSLWNE
Sbjct: 294 LLQDEVKRLTPSSRNSVKTPDTLTLNIQPDYYLFLLRHSSLYDSFYYSNYVNAKLSLWNE 353
Query: 357 NGKKRLHKMFARMGIPLSVTQENWIYMDNNFKRDLGVLFDKNLDRYGLQDIVRDGFLRTF 416
NGKKRLHKMFARMGIPLS QE W+YMD++ KR+LG++FDKNLDRYGLQDI+RDGF+RT
Sbjct: 354 NGKKRLHKMFARMGIPLSTAQETWLYMDHSIKRELGIIFDKNLDRYGLQDIIRDGFVRTL 413
Query: 417 GYRGSISASEFVESITALLEVGNASNALENLTTANVSQKDDTNQGDXXXXXXXXXXXQKI 476
GYRGSISASEFVE++TALLEVGN+++ ++ N DDT+ + QK+
Sbjct: 414 GYRGSISASEFVEALTALLEVGNSTD--KDSVKINNDNNDDTDGEE-----EEDNSAQKL 466
Query: 477 NRILKTRQKKWIANFWSSWDVLDN-NMDILSQGIKHATFLQRSVFETGVAILEKRLVKHL 535
+ +K+W++NFW SWD LD+ +++L++GI+ A LQR++F TGVAILEK+L+KHL
Sbjct: 467 TNL----RKRWVSNFWLSWDALDDRKVELLNRGIQLAQDLQRAIFNTGVAILEKKLIKHL 522
Query: 536 RIYRLCVLQDGPDLHLYRNPLTLLRLGSWLIEYYAENDEKQLLPLVLATLDETSDTYLCA 595
RIYRLCVLQDGPDL LYRNPLTLLRLG+WLIE AE+++KQLLP+VLA++DE +DTYL A
Sbjct: 523 RIYRLCVLQDGPDLDLYRNPLTLLRLGNWLIECCAESEDKQLLPMVLASIDENTDTYLVA 582
Query: 596 GIAPRYPRGLDILQQQQQKTLNNFTVAFQQIAAETGAKVRIDNFETSIIEIRKDDLQPFL 655
G+ PRYPRGLD + ++ LNNF++AFQQI AET AKVRIDNFE+SIIEIR++DL PFL
Sbjct: 583 GLTPRYPRGLDTI-HTKKPILNNFSMAFQQITAETDAKVRIDNFESSIIEIRREDLSPFL 641
Query: 656 ERLTLSGLI 664
E+LTLSGL+
Sbjct: 642 EKLTLSGLL 650
>SPAC17D4.02 [L] KOG2475 CDC45 (cell division cycle 45)-like protein
Length = 638
Score = 326 bits (836), Expect = 6e-89
Identities = 210/684 (30%), Positives = 348/684 (50%), Gaps = 66/684 (9%)
Query: 1 MYIGIAEFVGAYDKILHRCSSHSSCQLVIFVSCLNIDALCASKMLSSLFKKQLVQSQLVP 60
M+I +++ AY KI S C + +FV+ L+ DALCA K+LS+L K + ++ P
Sbjct: 1 MFIKRSDYASAYLKI-KEASVSGGCTVQLFVA-LDPDALCACKLLSTLLKGDFISHKIRP 58
Query: 61 VFGYSELKDHYQRL---DENINSVIFVGCGGMVDLESFLEIDPQENTQGPLDEIQLDKTD 117
V GY +L+ + L +E+I +I + CG MVDL ++L + D
Sbjct: 59 VSGYRDLEQANKTLLEQNEDIKFIILLNCGTMVDLNNYL----------------VSMED 102
Query: 118 VVQKFKKEIFVLDCHRPWNLDNLFGSQCITCFDDGTVEESLTEQKKAYYKLXXXXXXXXX 177
V I+V+D HRP NL+N++ I FDDG +EE + + A+Y
Sbjct: 103 V------SIYVIDSHRPHNLNNIYIENNIFVFDDGDIEEDMNKIHDAWYAFNSHELSDEE 156
Query: 178 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVVLGKRSSDELNPKKSH-KQRKREFH 236
+R S+E +++ K+++++
Sbjct: 157 NSDSSNEREEEVEDDNRSVESYSSSDYQARSR------RRFSEETTQRRAEIKEKRKKRK 210
Query: 237 NLEKVLQEYYSQGSTVLNSLSVQIYSLLSGIGETNLDYLWLCILGVSSLD---NSFPLVY 293
+L EYY +GS S++ ++++ S +G + D LWL I+G++ L+ S +
Sbjct: 211 EFASILSEYYEKGSWYGESITNILFAVASMLGREDNDMLWLAIVGLTCLEIHCQSSKKYF 270
Query: 294 NRLLPLLKDEVKRLTPSEKT---------KTPDSLNLEIRPDYSLFLLRHTSLYDSFYYS 344
NR LLKDEV RL PS KTP ++ + ++ L+RH SLYDS +S
Sbjct: 271 NRSYSLLKDEVNRLNPSPLENQIVGRAHGKTPHDQSIRLEDEFRFMLVRHWSLYDSMLHS 330
Query: 345 NYVNAKLSLWNENGKKRLHKMFARMGIPLSVTQENWIYMDNNFKRDLGVLFDKNLDRYGL 404
YV ++L +W+E G+KRLHK+ A+MG+ L ++ +I+M+ + K+ L + YGL
Sbjct: 331 AYVGSRLHIWSEEGRKRLHKLLAKMGLSLVECKQTYIHMNMDLKKTLKSSLKRFAPFYGL 390
Query: 405 QDIVRDGFLRTFGYRGSISASEFVESITALLEVGNASNALENLTTANVSQKDDTNQGDXX 464
D++ F RT+G++ ++SAS+ +I+ALLE+GN L++ T A D T +
Sbjct: 391 DDVIFHSFTRTYGFKCTLSASDVSYAISALLEMGNTGVLLQSKTVAR--SPDMTEE---- 444
Query: 465 XXXXXXXXXQKINRILKTRQKKWIANFWSSWDVLDNNMDILSQGIKHATFLQRSVFETGV 524
+ + + + ++W+ NF+ ++D LD ++D L + +K A LQR++ TG+
Sbjct: 445 ---------EYLEKFENAQNQEWLHNFYDAYDALD-DVDSLERALKLAMHLQRAIVRTGI 494
Query: 525 AILEKRLVKHLRIYRLCVLQDGPDLHLYRNPLTLLRLGSWLIEYYAENDEK----QLLPL 580
+LEKR +K LR +R ++ +GPDL ++ +PL L ++ W+ E E + + + LPL
Sbjct: 495 TLLEKRAIKTLRSFRFGLINEGPDLKIFMHPLALTKMSLWIAEAINEQEREFGKLRHLPL 554
Query: 581 VLATLDETSDTYLCAGIAPRYPRGLDILQQQQQKTLNNFTVAFQQIAAETGAKVRIDNFE 640
VLA E + YL G + + N F VAFQ++A T A +++D FE
Sbjct: 555 VLAAFVEEKNRYLIVGTSTSAFTSNEDDDDDDGHGHNRFGVAFQEVANMTSATLQMDCFE 614
Query: 641 TSIIEIRKDDLQPFLERLTLSGLI 664
S+IE +K DL FLE L+ L+
Sbjct: 615 ASVIECQKSDLGVFLESLSFKTLL 638
>7290114 [L] KOG2475 CDC45 (cell division cycle 45)-like protein
Length = 575
Score = 160 bits (404), Expect = 8e-39
Identities = 149/643 (23%), Positives = 265/643 (41%), Gaps = 99/643 (15%)
Query: 28 VIFVSCLNIDALCASKMLSSLFKKQLVQSQLVPVFGYSELKDHYQRLDENINSVIFVGCG 87
++ V +IDA+CAS++L +LFK + +VP+ G + LK Y ++ V+ V CG
Sbjct: 19 ILIVVNYDIDAICASRILQALFKYDHMLYTVVPIMGVTGLKRAYGEHQGDVKYVVLVNCG 78
Query: 88 GMVDLESFLEIDPQENTQGPLDEIQLDKTDVVQKFKKEIFVLDCHRPWNLDNLFGSQCIT 147
G VD+ L+ P D++ F+ D HRP ++ N++ + +
Sbjct: 79 GCVDIVELLQ---------PSDDVTF-------------FICDSHRPLDVCNIYSDRQVC 116
Query: 148 CFDDGTVEESLTEQKKAYYKLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 207
D ++EE++ + +Y
Sbjct: 117 ILGDASLEENIPAFETIFYDSEGEDEDEDESSDTEQQHDDSGAGESDQEDQAPRSR---- 172
Query: 208 XXXXVVLGKRSSDELNPKKSHKQR-KREFHNLEKVLQEYYSQGSTVLNSLSVQIYSLLSG 266
K S E + ++ KQR +R++ + + Y+Q S S ++ ++ L
Sbjct: 173 --------KLSRLERHEQRILKQRARRQWESERDRIMFEYTQFSYYGRSAALMVFELAWK 224
Query: 267 IGETNLDYLWLCILGVSS---LDNSFPLVYNRLLPLLKDEVKRLT-PSEKTKTPDSLNLE 322
+ + N+D LW I+G++ L Y L ++ V RLT + T + +
Sbjct: 225 LSKDNMDLLWWAIVGITEQLLLGKIESGAYTLELEQIQSHVSRLTNKTNDQNTMSASKIT 284
Query: 323 IRPDYSLFLLRHTSLYDSFYYSNYVNAKLSLWNENGKKRLHKMFARMGIPLSVTQENWIY 382
D L L RH + +S YS Y + +L LW G+KRLH++ MG+PL ++ +
Sbjct: 285 FENDLHLVLYRHWPVTESMRYSRYSSCQLKLWTLRGEKRLHELLLEMGLPLVHARQTYGA 344
Query: 383 MDNNFKRDLGVLFDKNLDRYGLQDIVRDGFLRTFGYRGSISASEFVESITALLEVGNASN 442
MD +++ + ++ ++Y + DIV F ++GYR +A+++V ++ A++E
Sbjct: 345 MDLVLRKEFFSMVERLAEKYDIADIVYGTFTLSYGYRSRYAAADYVYALLAIMESVKKHK 404
Query: 443 ALENLTTANVSQKDDTNQGDXXXXXXXXXXXQKINRILKTRQKKWIANFWSSWDVLD-NN 501
E+ F + D L +
Sbjct: 405 TPEDC-------------------------------------------FLEASDALSRQH 421
Query: 502 MDILSQGIKHATFLQRSVFETGVAILEKRLVKHLRIYRLCVLQDGPDLHLYRNPLTLLRL 561
+LS GI A L +VF + LE R V + VLQ+ Y P L L
Sbjct: 422 KQLLSAGIDQAKLLHAAVFRQVQSSLEARQVHSAGSFFYYVLQEEHAFFSY--PYALGLL 479
Query: 562 GSWLIE-YYAENDEKQL--LPLVLA-TLDETSDTYLCAGIAPRYPRGLDILQQQQQKTLN 617
+L+ + A + +Q LPL+ + L+ + L GI P ++ N
Sbjct: 480 ARFLLRGHVATSRARQASDLPLIASCPLNASEGMCLLVGIVP----------VREDSPRN 529
Query: 618 NFTVAFQQIAAETGAKVRIDNFETSIIEIRKDDLQPFLERLTL 660
F AF+Q A ++G + D FE +++++R+ DL FL+ LT+
Sbjct: 530 FFGKAFEQAAQKSGVALLQDFFEPAVVQLRQSDLTRFLDSLTV 572
>At3g25100 [L] KOG2475 CDC45 (cell division cycle 45)-like protein
Length = 596
Score = 122 bits (307), Expect = 1e-27
Identities = 149/678 (21%), Positives = 258/678 (37%), Gaps = 125/678 (18%)
Query: 12 YDKILHRCSSHSSCQ-LVIFVSCLNIDALCASKMLSSLFKKQLVQSQLVPVFGYSELKDH 70
Y K+ +S SS L+IF S ++D+LCA K+++ + + +Q PV + E+ +
Sbjct: 11 YAKLRESATSLSSQNPLLIFPSTSDVDSLCALKVITHILESDSIQYSCFPVSSFLEIHKY 70
Query: 71 Y-------QRLDENINSVIFVGCGGMVDLESFLEIDPQENTQGPLDEIQLDKTDVVQKFK 123
L+ +++ + G DL+ L++ P
Sbjct: 71 AGPAGLCSTSLESPPVTILLINWGCHRDLKLVLKLGPSAR-------------------- 110
Query: 124 KEIFVLDCHRPWNLDNL--FGSQCITCFDDGTVEESLTEQKKAYYKLXXXXXXXXXXXXX 181
+FV+D HRP +L NL + Q + D + KL
Sbjct: 111 --VFVVDSHRPIHLHNLSDYNEQVVVLHTDDDERQGDLAYDFDVLKLANESFQLRVEDAG 168
Query: 182 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVVLGKRSSDELNPKKSHKQRKRE--FHNLE 239
+ D+ + + K+RK +
Sbjct: 169 EESDEEEEDEEED---------------------EEDDDDDDGDRPSKRRKMGDGVKVFK 207
Query: 240 KVLQEYYSQGSTVLNSLSVQIYSLLSGIGETNLDYLWLCILGVSS-------LDNSFPLV 292
K+ ++YY G+ ++ L + + + LWL + ++ D +
Sbjct: 208 KLKRDYYKMGTFHGKPSGCLLFELSHMLRKNTNELLWLACVSLTDQFVHERLTDERYQAA 267
Query: 293 YNRLLPLLK-----DEVKRLTPSEKTKT--PDSLNLEIRPDYSLFLLRHTSLYDSFYYSN 345
L + D++ +T + TK PD + + L LLR +L+DS S+
Sbjct: 268 VMELEQHINSSGNIDKITSVTLKDGTKVRAPDCSRISYEEEPRLMLLREWTLFDSMLCSS 327
Query: 346 YVNAKLSLWNENGKKRLHKMFARMGIPLSVTQENWIYMDNNFKRDLGVLFDKNLDRYGLQ 405
Y+ KL W++NG K+L + ARMG L Q+ + YM KR + FD+ L YGL
Sbjct: 328 YIATKLKTWSDNGIKKLKLLLARMGFALIECQQKFPYMSLEVKRKMKQEFDRFLPEYGLN 387
Query: 406 DIVRDGFLRTFGYRGSISASEFVESITALLE--VGNASNALENLTTANVSQKDDTNQGDX 463
D FLR GY +SA++ V ITALLE +G+ ++
Sbjct: 388 DFYYRSFLRLHGYSSRVSAADVVYGITALLESFLGSGGSSASK----------------- 430
Query: 464 XXXXXXXXXXQKINRILKTRQKKWIANFWSSWDVLD-NNMDILSQGIKHATFLQRSVFET 522
F ++D L NN+D L G++ A +QR++
Sbjct: 431 --------------------------QFGEAYDALSLNNLDKLRSGMQQAIKVQRAILRQ 464
Query: 523 G-VAILEKRLVKHLRIYRLCVLQDGPDLHLYRNPLTLLRLGSWLIEYYAENDEKQLLPLV 581
G AI + ++ R +R ++D D P L + +L++ E + + P++
Sbjct: 465 GSAAITKSGCIRSGRKFRWVKIEDSMDAKYLGYPQALTKFCYFLMDALREKGAR-MKPML 523
Query: 582 LATLDETSDTYLCAGIAPRYPRGLDILQQQQQKTLNNFTVAFQQIAAETGAKVRIDNFET 641
A + L G+ + PR L ++ N F AF++ A E+ A + FE+
Sbjct: 524 CACASQQPGKILVVGVCGK-PR-LGAVRG------NAFGNAFRKAAQESRADYFHELFES 575
Query: 642 SIIEIRKDDLQPFLERLT 659
S I + + F+ RLT
Sbjct: 576 SWIVLDASAVNSFMIRLT 593
>Hs4502713 [L] KOG2475 CDC45 (cell division cycle 45)-like protein
Length = 566
Score = 111 bits (278), Expect = 3e-24
Identities = 108/455 (23%), Positives = 200/455 (43%), Gaps = 65/455 (14%)
Query: 217 RSSDELNPKKSHKQRKREFHNLEKVLQEYYSQGSTVLNSLSVQIYSLLSGIGETNLDYLW 276
R +E+ + ++++RE+ + + Y Q S ++ ++ L + + D LW
Sbjct: 159 RLEEEIVEQTMRRRQRREWEARRRDILFDYEQYEYHGTSSAMVMFELAWMLSKDLNDMLW 218
Query: 277 LCILGVSSL---DNSFPLVYNRLLPLLKDEVKRLT----PSEKTKTPDSLNLEIRPDYSL 329
I+G++ D + Y + +L+ V R E T + D + D L
Sbjct: 219 WAIVGLTDQWVQDKITQMKYVTDVGVLQRHVSRHNHRNEDEENTLSVDCTRISFEYDLRL 278
Query: 330 FLLRHTSLYDSFYYSNYVNAKLSLWNENGKKRLHKMFARMGIPLSVTQENWIYMDNNFKR 389
L +H SL+DS ++Y A+ LW+ +G+KRL + A MG+PL ++ + MD + K
Sbjct: 279 VLYQHWSLHDSLCNTSYTAARFKLWSVHGQKRLQEFLADMGLPLKQVKQKFQAMDISLKE 338
Query: 390 DLGVLFDKNLDRYGLQDIVRDGFLRTFGYRGSISASEFVESITALLEVGNASNALENLTT 449
+L + +++ +++G++D+ F FG++ AS+ V + +L+E
Sbjct: 339 NLREMIEESANKFGMKDMRVQTFSIHFGFKHKFLASDVVFATMSLME------------- 385
Query: 450 ANVSQKDDTNQGDXXXXXXXXXXXQKINRILKTRQKKWIANFWSSWDVLD-NNMDILSQG 508
S + D + D +F + D L +N+D L G
Sbjct: 386 ---SPEKDGSGTD---------------------------HFIQALDSLSRSNLDKLYHG 415
Query: 509 IKHATFLQRSVFETGVAILEKRLVKHLRIYRLCVLQDG-PDLHLYRNPLTLLRLGSWLIE 567
++ A R+ +T + L LV + C L +G PD+ L+ P +L L L++
Sbjct: 416 LELAKKQLRATQQTIASCLCTNLVISQGPFLYCSLMEGTPDVMLFSRPASLSLLSKHLLK 475
Query: 568 YY---AENDEKQLLPLVLAT-LDETSDTYLCAGIAPRYPRGLDILQQQQQKTLNNFTVAF 623
+ +N +LLPLV+A L T GI P + N F AF
Sbjct: 476 SFVCSTKNRRCKLLPLVMAAPLSMEHGTVTVVGIPP---------ETDSSDRKNFFGRAF 526
Query: 624 QQIAAETGAKVRIDNFETSIIEIRKDDLQPFLERL 658
++ A T +++ ++F+ S+IE++ +D FL+ L
Sbjct: 527 EKAAESTSSRMLHNHFDLSVIELKAEDRSKFLDAL 561
Score = 59.3 bits (142), Expect = 2e-08
Identities = 39/116 (33%), Positives = 56/116 (47%), Gaps = 22/116 (18%)
Query: 26 QLVIFVSCLNIDALCASKMLSSLFKKQLVQSQLVPVFGYSELKDHYQRLDENINSVIFVG 85
Q V+ ++DALCA K+L +LF+ VQ LVPV G+ EL+ + E + I +
Sbjct: 17 QRVLLFVASDVDALCACKILQALFQCDHVQYTLVPVSGWQELETAFLEHKEQFHYFILIN 76
Query: 86 CGGMVDLESFLEIDPQENTQGPLDEIQLDKTDVVQKFKKEIFVLDCHRPWNLDNLF 141
CG VDL LD +Q D+ + FV D HRP N+ N++
Sbjct: 77 CGANVDL---------------LDILQPDEDTI-------FFVCDTHRPVNVVNVY 110
>CE01570 [L] KOG2475 CDC45 (cell division cycle 45)-like protein
Length = 999
Score = 50.8 bits (120), Expect = 6e-06
Identities = 45/205 (21%), Positives = 90/205 (42%), Gaps = 16/205 (7%)
Query: 241 VLQEYYSQGSTVLNSLS-VQIYSLLSGIGETNLDYLWLCILGVSSL--DNSFPL-VYNRL 296
+L YY ST +S S V + + + + + + +W +G++S D + +Y ++
Sbjct: 186 ILWRYYE--STWFSSPSCVTLLEMAAEMNRVSAETMWFTAVGLNSAMADKLISIEMYTQI 243
Query: 297 -LPLLKDEVKRLTPSE---KTKTPDSLNLEIRPDYSLFLLRHTSLYDSFYYSNYVNAKLS 352
+ ++ V R P + K D L++ + L L H L+ + S Y + K
Sbjct: 244 CVDRMRPFVHRFMPKNIVNQGKVDDLLHITFGRELPLALYSHWDLFSAMMVSEYFSIKTK 303
Query: 353 LWNENGKKRLHKMFARMGIPLSVTQENWIYMDNNFKRDLGVLFDKNLDRYGLQDIVRDGF 412
W + G + + A++GI L T++ + + + + + +K +D F
Sbjct: 304 NWTQKGDVNIRHLLAQLGITLHETKQKFEALPTEQRNLVVDVLEKEMDSSFAT------F 357
Query: 413 LRTFGYRGSISASEFVESITALLEV 437
T GY G +SA + ++T LE+
Sbjct: 358 FGTLGYCGKLSACDVARAVTLRLEM 382
Database: KOG eukaryal database 04/03
Posted date: Apr 14, 2003 1:07 PM
Number of letters in database: 30,389,216
Number of sequences in database: 60,738
Lambda K H
0.320 0.138 0.402
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 37,368,861
Number of Sequences: 60738
Number of extensions: 1572711
Number of successful extensions: 3870
Number of sequences better than 1.0e-05: 6
Number of HSP's better than 0.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 3836
Number of HSP's gapped (non-prelim): 15
length of query: 664
length of database: 30,389,216
effective HSP length: 113
effective length of query: 551
effective length of database: 23,525,822
effective search space: 12962727922
effective search space used: 12962727922
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)