ORF STATUS Function Best COG Functional category Pathways and functional systems
r_klactVI5740 check: MH R KOG4155 General function prediction only FOG: WD40 repeat
Only best alignment is shown:
BLASTP 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= r_klactVI5740 1998377 1996263 -705
(705 letters)
Database: KOG eukaryal database 04/03
60,738 sequences; 30,389,216 total letters
Searching..................................................done
Color Key for Alignment Scores: 
Score E
Sequences producing significant alignments: (bits) Value
YJL112w [R] KOG4155 FOG: WD40 repeat 542 e-154
YKR036c [R] KOG4155 FOG: WD40 repeat 360 4e-99
7292465 [R] KOG0274 Cdc4 and related F-box and WD-40 proteins 131 4e-30
Hs16117781 [R] KOG0274 Cdc4 and related F-box and WD-40 proteins 129 2e-29
Hs16117779 [R] KOG0274 Cdc4 and related F-box and WD-40 proteins 129 2e-29
SPAC57A10.05c [R] KOG0274 Cdc4 and related F-box and WD-40 proteins 112 2e-24
Hs18544419 [A] KOG0272 U4/U6 small nuclear ribonucleoprotein Prp... 111 4e-24
Hs16306498 [S] KOG0281 Beta-TrCP (transducin repeats containing)... 110 6e-24
Hs16306496 [S] KOG0281 Beta-TrCP (transducin repeats containing)... 110 6e-24
Hs16306494 [S] KOG0281 Beta-TrCP (transducin repeats containing)... 110 6e-24
7300706 [S] KOG0281 Beta-TrCP (transducin repeats containing)/Sl... 109 1e-23
SPAC4D7.03 [R] KOG0274 Cdc4 and related F-box and WD-40 proteins 108 4e-23
SPAC29E6.01 [S] KOG0281 Beta-TrCP (transducin repeats containing... 107 5e-23
Hs4502477 [S] KOG0281 Beta-TrCP (transducin repeats containing)/... 106 1e-22
Hs16117783 [S] KOG0281 Beta-TrCP (transducin repeats containing)... 106 1e-22
CE27762 [R] KOG0274 Cdc4 and related F-box and WD-40 proteins 106 1e-22
CE25007 [R] KOG0274 Cdc4 and related F-box and WD-40 proteins 106 1e-22
CE28600 [S] KOG0281 Beta-TrCP (transducin repeats containing)/Sl... 105 2e-22
SPBC2G2.18 [R] KOG0274 Cdc4 and related F-box and WD-40 proteins 97 6e-20
Hs22059543 [Z] KOG0244 Kinesin-like protein 96 2e-19
At5g50230 [R] KOG0288 WD40 repeat protein TipD 94 7e-19
At3g49660 [R] KOG0266 WD40 repeat-containing protein 92 3e-18
At5g23430 [D] KOG0267 Microtubule severing protein katanin p80 s... 89 3e-17
Hs21071067 [K] KOG0263 Transcription initiation factor TFIID sub... 88 4e-17
7302979 [S] KOG0295 WD40 repeat-containing protein 88 5e-17
At5g08390 [D] KOG0267 Microtubule severing protein katanin p80 s... 87 7e-17
SPAC18B11.10 [R] KOG0266 WD40 repeat-containing protein 87 9e-17
7292737 [A] KOG0285 Pleiotropic regulator 1 87 9e-17
YBR198c [K] KOG0263 Transcription initiation factor TFIID subuni... 86 2e-16
At1g49040 [T] KOG2127 Calmodulin-binding protein CRAG contains D... 86 2e-16
At1g61210 [D] KOG0267 Microtubule severing protein katanin p80 s... 85 3e-16
Hs5031817 [D] KOG0267 Microtubule severing protein katanin p80 s... 85 4e-16
7290331 [R] KOG0266 WD40 repeat-containing protein 85 4e-16
YCR084c [R] KOG0266 WD40 repeat-containing protein 84 7e-16
Hs9506645 [R] KOG0266 WD40 repeat-containing protein 84 7e-16
Hs4557741 [S] KOG0295 WD40 repeat-containing protein 84 1e-15
CE02043 [R] KOG0289 mRNA splicing factor 84 1e-15
Hs7657439 [K] KOG0263 Transcription initiation factor TFIID subu... 83 1e-15
Hs16554627 [R] KOG0266 WD40 repeat-containing protein 83 1e-15
YIL046w [R] KOG0274 Cdc4 and related F-box and WD-40 proteins 83 2e-15
At4g15900 [A] KOG0285 Pleiotropic regulator 1 82 3e-15
7303694 [A] KOG0291 WD40-repeat-containing subunit of the 18S rR... 80 8e-15
SPBC354.03 [R] KOG0266 WD40 repeat-containing protein 79 2e-14
At2g43770 [A] KOG0265 U5 snRNP-specific protein-like factor and ... 79 3e-14
Hs21071065 [K] KOG0263 Transcription initiation factor TFIID sub... 78 4e-14
SPBP22H7.07 [A] KOG0285 Pleiotropic regulator 1 78 5e-14
CE00901 [R] KOG0266 WD40 repeat-containing protein 78 5e-14
YCR072c [S] KOG0271 Notchless-like WD40 repeat-containing protein 77 9e-14
SPCC18.05c [S] KOG0271 Notchless-like WD40 repeat-containing pro... 77 1e-13
SPAC227.12 [A] KOG0272 U4/U6 small nuclear ribonucleoprotein Prp... 77 1e-13
7302600 [R] KOG4155 FOG: WD40 repeat 76 2e-13
CE29339 [S] KOG0295 WD40 repeat-containing protein 75 3e-13
At1g71840 [S] KOG0296 Angio-associated migratory cell protein (c... 75 4e-13
SPBC32H8.07 [R] KOG0286 G-protein beta subunit 74 6e-13
Hs4505895 [A] KOG0285 Pleiotropic regulator 1 74 6e-13
At1g11160 [D] KOG0267 Microtubule severing protein katanin p80 s... 74 6e-13
Hs20548461 [R] KOG0644 Uncharacterized conserved protein contain... 74 8e-13
CE29560 [S] KOG0300 WD40 repeat-containing protein 74 8e-13
CE26861 [S] KOG0300 WD40 repeat-containing protein 74 8e-13
At2g41500 [A] KOG0272 U4/U6 small nuclear ribonucleoprotein Prp4... 74 8e-13
7301796 [A] KOG0272 U4/U6 small nuclear ribonucleoprotein Prp4 (... 74 8e-13
YFL009w [R] KOG0274 Cdc4 and related F-box and WD-40 proteins 74 1e-12
At5g67320 [B] KOG0273 Beta-transducin family (WD-40 repeat) protein 74 1e-12
SPBC6B1.10 [S] KOG0282 mRNA splicing factor 73 1e-12
CE06574 [R] KOG0266 WD40 repeat-containing protein 73 1e-12
7293972 [A] KOG0272 U4/U6 small nuclear ribonucleoprotein Prp4 (... 73 1e-12
Hs13994164_1 [R] KOG0274 Cdc4 and related F-box and WD-40 proteins 73 1e-12
YPL151c [A] KOG0285 Pleiotropic regulator 1 73 2e-12
ECU01g1300 [R] KOG0274 Cdc4 and related F-box and WD-40 proteins 73 2e-12
Hs22064139 [R] KOG0288 WD40 repeat protein TipD 72 2e-12
Hs19913371 [B] KOG0273 Beta-transducin family (WD-40 repeat) pro... 72 2e-12
Hs16445438 [R] KOG0644 Uncharacterized conserved protein contain... 72 2e-12
Hs16445436 [R] KOG0644 Uncharacterized conserved protein contain... 72 2e-12
ECU02g1400 [A] KOG0284 Polyadenylation factor I complex subunit ... 72 2e-12
7302720 [R] KOG0266 WD40 repeat-containing protein 72 2e-12
At1g15440 [A] KOG0291 WD40-repeat-containing subunit of the 18S ... 72 3e-12
Hs4758560 [A] KOG0265 U5 snRNP-specific protein-like factor and ... 72 4e-12
Hs22047819 [R] KOG0274 Cdc4 and related F-box and WD-40 proteins 72 4e-12
CE05533 [A] KOG0285 Pleiotropic regulator 1 72 4e-12
Hs19913369 [A] KOG0319 WD40-repeat-containing subunit of the 18S... 71 5e-12
Hs13629793 [A] KOG0265 U5 snRNP-specific protein-like factor and... 71 5e-12
At3g05090 [S] KOG0308 Conserved WD40 repeat-containing protein 71 5e-12
At1g04510 [R] KOG0289 mRNA splicing factor 71 5e-12
7303687 [K] KOG0263 Transcription initiation factor TFIID subuni... 71 5e-12
7296209 [B] KOG0273 Beta-transducin family (WD-40 repeat) protein 71 5e-12
7293188 [D] KOG0267 Microtubule severing protein katanin p80 sub... 71 6e-12
Hs4758558 [A] KOG0272 U4/U6 small nuclear ribonucleoprotein Prp4... 70 8e-12
7290895 [R] KOG0286 G-protein beta subunit 70 8e-12
SPBC15D4.14 [K] KOG0263 Transcription initiation factor TFIID su... 70 1e-11
Hs13376751 [R] KOG0266 WD40 repeat-containing protein 70 1e-11
At3g18130 [T] KOG0279 G protein beta subunit-like protein 70 1e-11
Hs18874090 [S] KOG0308 Conserved WD40 repeat-containing protein 70 1e-11
At3g16650 [A] KOG0285 Pleiotropic regulator 1 70 1e-11
Hs8922679 [R] KOG0275 Conserved WD40 repeat-containing protein 69 2e-11
ECU03g0430 [S] KOG0271 Notchless-like WD40 repeat-containing pro... 69 2e-11
CE18408 [R] KOG4155 FOG: WD40 repeat 69 2e-11
SPBC1289.11 [A] KOG0265 U5 snRNP-specific protein-like factor an... 69 3e-11
7290219 [R] KOG0646 WD40 repeat protein 69 3e-11
YLR129w [A] KOG0306 WD40-repeat-containing subunit of the 18S rR... 68 4e-11
At1g48630 [T] KOG0279 G protein beta subunit-like protein 68 5e-11
At1g10580 [S] KOG0282 mRNA splicing factor 68 5e-11
7303631 [S] KOG0308 Conserved WD40 repeat-containing protein 67 7e-11
SPAC630.14c [R] KOG0266 WD40 repeat-containing protein 67 9e-11
Hs5729852 [R] KOG0286 G-protein beta subunit 67 9e-11
Hs5174447 [T] KOG0279 G protein beta subunit-like protein 67 9e-11
Hs20336270 [R] KOG0286 G-protein beta subunit 67 9e-11
Hs11055998 [R] KOG0286 G-protein beta subunit 67 1e-10
CE11748 [R] KOG0266 WD40 repeat-containing protein 67 1e-10
At5g40880 [R] KOG0274 Cdc4 and related F-box and WD-40 proteins 67 1e-10
Hs4758934 [I] KOG0301 Phospholipase A2-activating protein (conta... 66 2e-10
At3g49180 [R] KOG0646 WD40 repeat protein 66 2e-10
7296187 [S] KOG0271 Notchless-like WD40 repeat-containing protein 66 2e-10
SPBC713.04c [A] KOG0291 WD40-repeat-containing subunit of the 18... 66 2e-10
CE11192 [A] KOG0291 WD40-repeat-containing subunit of the 18S rR... 66 2e-10
At3g18860 [I] KOG0301 Phospholipase A2-activating protein (conta... 66 2e-10
Hs4557229 [S] KOG0296 Angio-associated migratory cell protein (c... 65 3e-10
Hs11321585 [R] KOG0286 G-protein beta subunit 65 3e-10
CE05372 [A] KOG0272 U4/U6 small nuclear ribonucleoprotein Prp4 (... 65 3e-10
7297305 [T] KOG0279 G protein beta subunit-like protein 65 3e-10
At4g25440_1 [R] KOG0274 Cdc4 and related F-box and WD-40 proteins 65 3e-10
Hs19705568 [R] KOG0288 WD40 repeat protein TipD 65 4e-10
CE06090 [T] KOG0279 G protein beta subunit-like protein 65 4e-10
At1g18080 [T] KOG0279 G protein beta subunit-like protein 65 4e-10
7296245 [A] KOG0265 U5 snRNP-specific protein-like factor and re... 65 4e-10
Hs4758032 [U] KOG0276 Vesicle coat complex COPI beta' subunit 65 5e-10
At4g02730 [R] KOG0266 WD40 repeat-containing protein 65 5e-10
At1g62020 [U] KOG0292 Vesicle coat complex COPI alpha subunit 65 5e-10
Hs8922428 [S] KOG0271 Notchless-like WD40 repeat-containing protein 64 6e-10
Hs7706657 [S] KOG0282 mRNA splicing factor 64 8e-10
CE18578 [A] KOG0265 U5 snRNP-specific protein-like factor and re... 64 8e-10
At2g46290 [JT] KOG0643 Translation initiation factor 3 subunit i... 64 8e-10
At1g73720 [R] KOG0275 Conserved WD40 repeat-containing protein 64 8e-10
7300980 [R] KOG4155 FOG: WD40 repeat 64 8e-10
SPBC3D6.12 [A] KOG0306 WD40-repeat-containing subunit of the 18S... 64 1e-09
ECU01g1290 [U] KOG0292 Vesicle coat complex COPI alpha subunit 64 1e-09
At5g49200 [R] KOG0274 Cdc4 and related F-box and WD-40 proteins 64 1e-09
At5g16750 [A] KOG0319 WD40-repeat-containing subunit of the 18S ... 64 1e-09
At2g46280 [JT] KOG0643 Translation initiation factor 3 subunit i... 64 1e-09
At1g79990 [U] KOG0276 Vesicle coat complex COPI beta' subunit 64 1e-09
At1g27840 [KL] KOG4283 Transcription-coupled repair protein CSA ... 64 1e-09
7299285 [R] KOG4155 FOG: WD40 repeat 64 1e-09
At2g21390 [U] KOG0292 Vesicle coat complex COPI alpha subunit 63 2e-09
SPCC1672.07 [R] KOG1539 WD repeat protein 62 2e-09
SPBPJ4664.04 [U] KOG0292 Vesicle coat complex COPI alpha subunit 62 2e-09
Hs13376840 [R] KOG4155 FOG: WD40 repeat 62 2e-09
CE02186 [R] KOG0286 G-protein beta subunit 62 2e-09
7297332 [D] KOG0642 Cell-cycle nuclear protein contains WD-40 re... 62 2e-09
Hs7662364 [R] KOG0641 WD40 repeat protein 62 3e-09
Hs20357529 [R] KOG0286 G-protein beta subunit 62 3e-09
At3g15980 [U] KOG0276 Vesicle coat complex COPI beta' subunit 62 3e-09
7300806 [S] KOG0282 mRNA splicing factor 62 3e-09
7298279 [S] KOG0316 Conserved WD40 repeat-containing protein 62 4e-09
Hs4826956 [A] KOG0291 WD40-repeat-containing subunit of the 18S ... 61 5e-09
CE21113 [A] KOG0284 Polyadenylation factor I complex subunit PFS2 61 5e-09
At1g19750 [KL] KOG4283 Transcription-coupled repair protein CSA ... 61 5e-09
7298053 [U] KOG0276 Vesicle coat complex COPI beta' subunit 61 5e-09
Hs4827030 [B] KOG0639 Transducin-like enhancer of split protein ... 61 7e-09
Hs20127645 [R] KOG0266 WD40 repeat-containing protein 61 7e-09
CE18673 [U] KOG0276 Vesicle coat complex COPI beta' subunit 61 7e-09
At1g52360 [U] KOG0276 Vesicle coat complex COPI beta' subunit 61 7e-09
SPCC5E4.03c [K] KOG0263 Transcription initiation factor TFIID su... 60 1e-08
SPAC144.13c [DO] KOG0305 Anaphase promoting complex Cdc20 Cdh1 a... 60 1e-08
SPAC13G7.08c [R] KOG0646 WD40 repeat protein 60 1e-08
Hs11128017 [D] KOG0642 Cell-cycle nuclear protein contains WD-40... 60 1e-08
CE15742 [R] KOG0275 Conserved WD40 repeat-containing protein 60 1e-08
At5g52820 [S] KOG0271 Notchless-like WD40 repeat-containing protein 60 1e-08
HsM4827028 [B] KOG0639 Transducin-like enhancer of split protein... 60 1e-08
Hs7657381 [R] KOG0289 mRNA splicing factor 60 1e-08
Hs4505731 [U] KOG0277 Peroxisomal targeting signal type 2 receptor 60 1e-08
Hs4504053 [R] KOG0286 G-protein beta subunit 60 1e-08
Hs21541824 [B] KOG0639 Transducin-like enhancer of split protein... 60 1e-08
CE07020 [R] KOG0288 WD40 repeat protein TipD 60 1e-08
At5g64730 [S] KOG0316 Conserved WD40 repeat-containing protein 60 1e-08
7301430 [B] KOG0639 Transducin-like enhancer of split protein (c... 60 1e-08
Hs7662430 [S] KOG0300 WD40 repeat-containing protein 59 2e-08
Hs5453581 [R] KOG0274 Cdc4 and related F-box and WD-40 proteins 59 2e-08
Hs22046076 [R] KOG0266 WD40 repeat-containing protein 59 2e-08
At5g51980 [R] KOG0274 Cdc4 and related F-box and WD-40 proteins 59 2e-08
Hs4557491 [A] KOG0640 mRNA cleavage stimulating factor complex; ... 59 3e-08
Hs22048015 [R] KOG0266 WD40 repeat-containing protein 59 3e-08
7302603 [R] KOG0289 mRNA splicing factor 59 3e-08
7301145 [R] KOG0644 Uncharacterized conserved protein contains W... 59 3e-08
YNL317w [A] KOG0284 Polyadenylation factor I complex subunit PFS2 59 3e-08
SPAC25H1.08c [S] KOG0296 Angio-associated migratory cell protein... 59 3e-08
Hs4758030 [U] KOG0292 Vesicle coat complex COPI alpha subunit 59 3e-08
Hs17462432 [I] KOG1933 Cholesterol transport protein (Niemann-Pi... 59 3e-08
Hs14150114 [S] KOG0316 Conserved WD40 repeat-containing protein 59 3e-08
At4g29830 [R] KOG4155 FOG: WD40 repeat 59 3e-08
CE20251_2 [U] KOG0276 Vesicle coat complex COPI beta' subunit 59 3e-08
YOR212w [R] KOG0286 G-protein beta subunit 58 4e-08
SPAC2E1P5.05 [A] KOG0299 U3 snoRNP-associated protein (contains ... 58 4e-08
At2g47990 [S] KOG0310 Conserved WD40 repeat-containing protein 58 4e-08
At1g24530 [R] KOG4155 FOG: WD40 repeat 58 4e-08
At2g26490 [R] KOG4155 FOG: WD40 repeat 57 7e-08
YGL137w [U] KOG0276 Vesicle coat complex COPI beta' subunit 57 1e-07
SPAC31A2.14 [S] KOG0308 Conserved WD40 repeat-containing protein 57 1e-07
Hs5803221 [A] KOG0306 WD40-repeat-containing subunit of the 18S ... 57 1e-07
CE17845 [R] KOG0286 G-protein beta subunit 57 1e-07
At2g22040 [R] KOG0315 G-protein beta subunit-like protein (conta... 57 1e-07
7293756 [R] KOG0286 G-protein beta subunit 57 1e-07
YGL003c [DO] KOG0305 Anaphase promoting complex Cdc20 Cdh1 and A... 57 1e-07
SPAC29A4.18 [B] KOG0264 Nucleosome remodeling factor subunit CAF... 57 1e-07
Hs5032159 [B] KOG0273 Beta-transducin family (WD-40 repeat) protein 57 1e-07
Hs18599374 [Z] KOG0313 Microtubule binding protein YTM1 (contain... 57 1e-07
Hs15150805 [B] KOG0273 Beta-transducin family (WD-40 repeat) pro... 56 2e-07
At3g18140 [R] KOG0315 G-protein beta subunit-like protein (conta... 56 2e-07
7303128 [A] KOG0299 U3 snoRNP-associated protein (contains WD40 ... 56 2e-07
SPBC31F10.13c [DK] KOG0973 Histone transcription regulator HIRA ... 56 2e-07
HsM4507523 [B] KOG0639 Transducin-like enhancer of split protein... 56 2e-07
Hs22043515 [S] KOG0295 WD40 repeat-containing protein 56 2e-07
Hs20149592 [I] KOG0278 Serine/threonine kinase receptor-associat... 56 2e-07
Hs16445424 [Z] KOG0313 Microtubule binding protein YTM1 (contain... 56 2e-07
CE17294 [S] KOG0271 Notchless-like WD40 repeat-containing protein 56 2e-07
CE14434 [B] KOG0639 Transducin-like enhancer of split protein (c... 56 2e-07
7290304 [S] KOG0310 Conserved WD40 repeat-containing protein 56 2e-07
Hs4557467 [KL] KOG4283 Transcription-coupled repair protein CSA ... 55 3e-07
CE27713 [A] KOG0265 U5 snRNP-specific protein-like factor and re... 55 3e-07
CE14894 [A] KOG0319 WD40-repeat-containing subunit of the 18S rR... 55 3e-07
At3g21540 [A] KOG0306 WD40-repeat-containing subunit of the 18S ... 55 3e-07
Hs14150011_2 [R] KOG0274 Cdc4 and related F-box and WD-40 proteins 55 3e-07
Hs21361151 [B] KOG0639 Transducin-like enhancer of split protein... 55 4e-07
Hs17402902 [R] KOG0322 G-protein beta subunit-like protein GNB1L... 55 4e-07
Hs13376099 [B] KOG0639 Transducin-like enhancer of split protein... 55 4e-07
YPR178w [A] KOG0272 U4/U6 small nuclear ribonucleoprotein Prp4 (... 55 5e-07
ECU11g1750 [K] KOG0263 Transcription initiation factor TFIID sub... 55 5e-07
ECU08g1250 [U] KOG0276 Vesicle coat complex COPI beta' subunit 55 5e-07
CE11196 [Z] KOG0313 Microtubule binding protein YTM1 (contains W... 55 5e-07
At4g05410 [A] KOG0299 U3 snoRNP-associated protein (contains WD4... 55 5e-07
7293146 [R] KOG0286 G-protein beta subunit 55 5e-07
SPCC16A11.02 [A] KOG0319 WD40-repeat-containing subunit of the 1... 54 6e-07
At1g15470 [I] KOG0278 Serine/threonine kinase receptor-associate... 54 6e-07
7302082 [A] KOG0640 mRNA cleavage stimulating factor complex; su... 54 6e-07
SPBC713.05 [S] KOG0316 Conserved WD40 repeat-containing protein 54 8e-07
SPBC428.19c [S] KOG0310 Conserved WD40 repeat-containing protein 54 8e-07
Hs8923881 [R] KOG0266 WD40 repeat-containing protein 54 8e-07
Hs8923577 [S] KOG0294 WD40 repeat-containing protein 54 8e-07
Hs4757880 [D] KOG1036 Mitotic spindle checkpoint protein BUB3 WD... 54 8e-07
Hs20556143 [S] KOG0294 WD40 repeat-containing protein 54 8e-07
At2g05720 [A] KOG0272 U4/U6 small nuclear ribonucleoprotein Prp4... 54 8e-07
YMR116c [T] KOG0279 G protein beta subunit-like protein 54 1e-06
YLR222c [A] KOG0319 WD40-repeat-containing subunit of the 18S rR... 54 1e-06
Hs4759276 [A] KOG0299 U3 snoRNP-associated protein (contains WD4... 54 1e-06
Hs4506439 [B] KOG0264 Nucleosome remodeling factor subunit CAF1/... 54 1e-06
Hs22048320 [B] KOG0264 Nucleosome remodeling factor subunit CAF1... 54 1e-06
CE02005 [R] KOG0288 WD40 repeat protein TipD 54 1e-06
At5g25150 [K] KOG0263 Transcription initiation factor TFIID subu... 54 1e-06
At4g04940 [R] KOG1539 WD repeat protein 54 1e-06
At3g20740 [K] KOG1034 Transcriptional repressor EED/ESC/FIE requ... 54 1e-06
Hs11968023 [R] KOG1721 FOG: Zn-finger 53 1e-06
YOR269w [S] KOG0295 WD40 repeat-containing protein 53 2e-06
YNL006w [R] KOG0315 G-protein beta subunit-like protein (contain... 53 2e-06
YBR175w [R] KOG0266 WD40 repeat-containing protein 53 2e-06
SPBC1198.12 [DO] KOG0305 Anaphase promoting complex Cdc20 Cdh1 a... 53 2e-06
Hs5032027 [B] KOG0264 Nucleosome remodeling factor subunit CAF1/... 53 2e-06
At3g15610 [I] KOG0278 Serine/threonine kinase receptor-associate... 53 2e-06
At2g47410 [R] KOG0644 Uncharacterized conserved protein contains... 53 2e-06
At2g19520 [B] KOG0264 Nucleosome remodeling factor subunit CAF1/... 53 2e-06
At1g47610 [R] KOG4155 FOG: WD40 repeat 53 2e-06
7296108 [I] KOG0301 Phospholipase A2-activating protein (contain... 53 2e-06
Hs4505465_2 [TU] KOG1786 Lysosomal trafficking regulator LYST an... 53 2e-06
YDL145c [U] KOG0292 Vesicle coat complex COPI alpha subunit 52 2e-06
SPBC1A4.07c [A] KOG0268 Sof1-like rRNA processing protein (conta... 52 2e-06
Hs7705377 [DO] KOG0305 Anaphase promoting complex Cdc20 Cdh1 and... 52 2e-06
At1g80710 [S] KOG4328 WD40 protein 52 2e-06
YLL011w [A] KOG0268 Sof1-like rRNA processing protein (contains ... 52 3e-06
YDR364c [S] KOG0282 mRNA splicing factor 52 3e-06
At1g49450 [R] KOG4155 FOG: WD40 repeat 52 3e-06
7299974 [B] KOG0264 Nucleosome remodeling factor subunit CAF1/NU... 52 3e-06
At5g15550 [Z] KOG0313 Microtubule binding protein YTM1 (contains... 52 4e-06
HsM6005894_2 [R] KOG4155 FOG: WD40 repeat 52 4e-06
Hs21536371_2 [R] KOG4155 FOG: WD40 repeat 52 4e-06
YGL116w [DO] KOG0305 Anaphase promoting complex Cdc20 Cdh1 and A... 51 5e-06
SPAC6B12.15 [T] KOG0279 G protein beta subunit-like protein 51 5e-06
At5g50120 [R] KOG4155 FOG: WD40 repeat 51 5e-06
7298293 [DO] KOG0305 Anaphase promoting complex Cdc20 Cdh1 and A... 51 5e-06
Hs20143910 [R] KOG0266 WD40 repeat-containing protein 51 7e-06
Hs18677720 [R] KOG0266 WD40 repeat-containing protein 51 7e-06
At1g49540 [BK] KOG1063 RNA polymerase II elongator complex subun... 51 7e-06
7294830 [K] KOG0263 Transcription initiation factor TFIID subuni... 51 7e-06
CE27127 [A] KOG0306 WD40-repeat-containing subunit of the 18S rR... 50 9e-06
CE16234 [B] KOG0264 Nucleosome remodeling factor subunit CAF1/NU... 50 9e-06
At5g13840 [DO] KOG0305 Anaphase promoting complex Cdc20 Cdh1 and... 50 9e-06
At4g29730 [B] KOG0264 Nucleosome remodeling factor subunit CAF1/... 50 9e-06
At3g44530 [DK] KOG0973 Histone transcription regulator HIRA WD r... 50 9e-06
7303841 [A] KOG0319 WD40-repeat-containing subunit of the 18S rR... 50 9e-06
>YJL112w [R] KOG4155 FOG: WD40 repeat
Length = 714
Score = 542 bits (1396), Expect = e-154
Identities = 307/732 (41%), Positives = 453/732 (60%), Gaps = 49/732 (6%)
Query: 4 NTGDQFANLGKALSTTASVLFSSQPMEDT---ILSYSSPYKKLLHETITNAGGGSSLVKV 60
+ DQ ++GK LSTTAS + Q +L+ + PYK LL T+ NA S K
Sbjct: 2 SVNDQITHIGKTLSTTASAFLNYQKSNSNTQDVLTNNGPYKNLLSNTVNNASSTSYFYKR 61
Query: 61 RHDVKLSKGKNTGFQDIYSNSK--EFFKNSYSDPKTTFKVLSYLSDDLLEDAP-RDTIPQ 117
+ K + F+DIYS ++ + F+N ++D KT F++L+Y+SDDLL + P ++ +
Sbjct: 62 TEHGRFVKNASNTFEDIYSKTRRGDVFRNKFTDNKTCFRMLTYISDDLLNEIPTKEGLKS 121
Query: 118 NKN--MITENGEKRSAK--SKKQEPTLFQGFEASLPVINETIELQQKLIMNSDMKPLT-- 171
+ + ++TE GE + + + K+E +LFQGF++ LP+ IE ++L +++ T
Sbjct: 122 DADGKLLTEGGENENLRKNASKKETSLFQGFKSYLPIAELAIENTERLNYDTNGTSGTVG 181
Query: 172 -------DSESIPVYAXXXXXXXXFSLPDHLKADKLLHSYSASFLKDASRSITDNLDLLE 224
+E ++ F +P ++ K+ SYS S LK S+++ ++L+ L
Sbjct: 182 AKDVMSKTNERDEIHTELPNFQDSFLIPPGVETKKISSSYSPSALKSFSQTLVNSLEFLN 241
Query: 225 IQKNLAASEIRELDIKLEKLKMMRELVFKRVAKIEQHELFLEKHLNNVKDRIDMIIEYNM 284
IQKN SEIR++++++E L+ +E + ++A IEQ++L LE +L + DR+D + EY +
Sbjct: 242 IQKNSTLSEIRDIEVEVENLRQKKEKLLGKIANIEQNQLLLEDNLKQIDDRLDFLEEYGL 301
Query: 285 DK-EYSSEDEENINGLSELSPKXXXXXXXXXXXXXXPLENKEEEHSPLLSKSIYQQLQDH 343
+ E +S++ +G+SE K + E + P + QQL+D
Sbjct: 302 EVIEANSDENAEDDGMSER--KALKNDAIRNEGVTTESISSEASNLPPRRR---QQLRDD 356
Query: 344 EKKSDISERKKHSTSKKIKDVGVSHRNRRRKTYPTLQQFYDSGSKITSLPKAHDEDITCL 403
+ + +S SKK R RK++PT QQ Y+ G+KI S+ HD+ +TCL
Sbjct: 357 NSLNRLGAF--YSKSKK----------RHRKSFPTFQQLYEPGTKIGSIMSTHDDFLTCL 404
Query: 404 DFDMPFGTMCSAGSLDHSVKVWDLSKKKQIATLHGHLASISCMQIDQ-YSTLITGGRDAV 462
DFD PFGT+C+AG LDH+VK+WDLSK+ +I L GHLA+I+CMQI++ Y TL+TGGRDA
Sbjct: 405 DFDAPFGTLCTAGYLDHTVKIWDLSKQNKIGELAGHLATINCMQINRDYGTLVTGGRDAA 464
Query: 463 LKLWDIDKA--MADEASN----SSEDNDACLYTFDSHVDEITAISFDGDNLVSGSQDRTV 516
LKLW+++ A + E N ++ + C++TF++H DE+TA+S D LVSGSQDRT+
Sbjct: 465 LKLWNLNLAQQLYQETQNLTSPTNHIDSPCVHTFEAHTDEVTALSLDPSFLVSGSQDRTI 524
Query: 517 RQWDLNSGKCTQTIDISFATGPMRSQRNIPLRNSVLLTK--EPPAIGALQCFDAALATGT 574
RQWDL SGKC QTID+SFA + + N+ L S LLT+ E P+IGALQ FDAALATGT
Sbjct: 525 RQWDLRSGKCLQTIDLSFAN-VLTTSTNVDLSKSTLLTQRNERPSIGALQSFDAALATGT 583
Query: 575 KDGIVRLWDLRSGKVVRMLEGHTDAITSLQFDSVNLVTGAMDRSIRIWDLRTGILSDVFA 634
KDG+VRLWDLRSGKV+R L+GHTDAITSL+FDS LVTG+ DR++RIWDLRTG+L+ A
Sbjct: 584 KDGVVRLWDLRSGKVIRTLKGHTDAITSLKFDSACLVTGSYDRTVRIWDLRTGLLNKFHA 643
Query: 635 YEQPITSLH-FDLDKIVISNNEPTVKIYNRKDGNHWFCGEDDPEQGNVDFVRYKHGYLVE 693
Y P+ SL F + V+ +EP+V+IY+ + W C E E +V V+YK Y+VE
Sbjct: 644 YSAPVLSLDLFQENAAVVVADEPSVQIYDSEKDESWSCVEQGNET-SVSTVKYKENYMVE 702
Query: 694 GRSNGDINTWAI 705
GR NGD+N WA+
Sbjct: 703 GRENGDVNIWAV 714
>YKR036c [R] KOG4155 FOG: WD40 repeat
Length = 659
Score = 360 bits (924), Expect = 4e-99
Identities = 234/641 (36%), Positives = 336/641 (51%), Gaps = 91/641 (14%)
Query: 85 FKNSYSDPKTTFKVLSYLSDDLLEDAPRDTIPQNKNMITENGEKRSAKSKKQEPTLFQGF 144
F+N+Y+D TTF++L++L + NG ++K P+LF+GF
Sbjct: 90 FQNNYADSATTFRILAHLDEH--------------GYPLPNGA-----AEKNLPSLFEGF 130
Query: 145 EASLPVINETIELQQKLIMNSDMKPLTDSESIPVYAXXXXXXXXFSLPDHLKADKLLHSY 204
+A++ +I Q+ L+ N D +D E LPD + + +Y
Sbjct: 131 KATVSIIQ-----QRLLLDNVDGATNSDKEKY------------VQLPD-INTGFVNKTY 172
Query: 205 SASFLKDASRSITDNLDLLEIQKNLAASEIRELDIKLEKLKMMRELVFKRVAKIEQHELF 264
S L + N++ L I K L E+ LD + +L+ + + +RV I+
Sbjct: 173 SRIDLTHLLEDVETNVENLSINKTLEMDELTRLDSMINELESRKLKILERVKHIDSKSTN 232
Query: 265 LEKHLNNVKDRIDMIIEYNM--DKEYSSEDEENINGLSELSPKXXXXXXXXXXXXXXPLE 322
LE + +KDRI+ I EYN+ D+E S + SE S +
Sbjct: 233 LENDVTLIKDRINFIEEYNLEADREQSLRKQMEEERSSEASSFT---------------Q 277
Query: 323 NKEEEHSPLLSKSIYQQLQDHEKKSDISERKKHSTSKKIKDVGVSHRNRRRKTYPTLQQF 382
N+E S +S +L+D K + K H +++I +S R T
Sbjct: 278 NEEAISSLCDVESKDTRLKDFYK---MPHEKSHDKNRQI----ISETYSRNTT------- 323
Query: 383 YDSGSKITSLPKAHDEDITCLDFDMPFGTMCSAGSLDHSVKVWDLSKKKQIATLHGHLAS 442
++T H IT LDFD P+GT+CS+ D VKVWDL+ Q+ L GHLA+
Sbjct: 324 ---AFRMTIPHGEHGNSITALDFDTPWGTLCSSSYQDRIVKVWDLNHGIQVGELPGHLAT 380
Query: 443 ISCMQIDQ--YSTLITGGRDAVLKLWDIDKAMADEASNS------SEDNDACLYTFDSHV 494
++CMQID+ Y+ LITG +DA LKLWD++ + +S E C++ F+ H
Sbjct: 381 VNCMQIDKKNYNMLITGSKDATLKLWDLNLSREIYLDHSPLKEKTEEIVTPCIHNFELHK 440
Query: 495 DEITAISFDGDNLVSGSQDRTVRQWDLNSGKCTQTIDISFATGPMRSQRNIPLRN----S 550
DEITA+SFD + LVSGS+D+ + WDL +GKC Q +D+ F P S +P R+ +
Sbjct: 441 DEITALSFDSEALVSGSRDKKIFHWDLTTGKCIQQLDLIFT--PTHSDIKMPARSLNNGA 498
Query: 551 VLLTKEPPAIGALQCFDAALATGTKDGIVRLWDLRSGKVVRMLEGHTDAITSLQFDSVNL 610
LL E P IGALQC+++ALATGTKDGIVRLWDLR GK VR+LEGHTD ITSL+FDS L
Sbjct: 499 CLLGTEAPMIGALQCYNSALATGTKDGIVRLWDLRVGKPVRLLEGHTDGITSLKFDSEKL 558
Query: 611 VTGAMDRSIRIWDLRTGILSDVFAYEQPITSLHFDLDKIVISNNEPTVKIYNRKDGNHWF 670
VTG+MD S+RIWDLRT + DV AY+ P++SL FD I + NE V ++N + HW
Sbjct: 559 VTGSMDNSVRIWDLRTSSILDVIAYDLPVSSLDFDGKLITVGANEGGVNVFNMERDEHWM 618
Query: 671 CGE------DDPEQGNVDFVRYKHGYLVEGRSNGDINTWAI 705
E D + V+YK G+L+ G ++GDIN W +
Sbjct: 619 TPEPPHSLDGDELSRRIAIVKYKDGFLINGHNDGDINVWTL 659
>7292465 [R] KOG0274 Cdc4 and related F-box and WD-40 proteins
Length = 1326
Score = 131 bits (329), Expect = 4e-30
Identities = 84/315 (26%), Positives = 143/315 (44%), Gaps = 43/315 (13%)
Query: 394 KAHDED-ITCLDFDMPFGTMCSAGSLDHSVKVWDLSKKKQIATLHGHLASISCMQIDQYS 452
K HD+ ITCL F G +GS D+++KVW K + TL GH + Q+ +
Sbjct: 991 KGHDDHVITCLQFS---GNRIVSGSDDNTLKVWSAVNGKCLRTLVGHTGGVWSSQMSG-N 1046
Query: 453 TLITGGRDAVLKLWDIDKAMADEASNSSEDNDACLYTFDSHVDEITAISFDGDNLVSGSQ 512
+I+G D LK+WD+D AC++T H + + G +VSGS+
Sbjct: 1047 IIISGSTDRTLKVWDMDSG-------------ACVHTLQGHTSTVRCMHLHGSKVVSGSR 1093
Query: 513 DRTVRQWDLNSGKCTQTIDISFATGPMRSQRNIPLRNSVLLTKEPPAIGALQCFDAALAT 572
D T+R WD+ G C +L A+ +Q + +
Sbjct: 1094 DATLRVWDIEQGSCLH-----------------------VLVGHLAAVRCVQYDGKLIVS 1130
Query: 573 GTKDGIVRLWDLRSGKVVRMLEGHTDAITSLQFDSVNLVTGAMDRSIRIWDLRTGILSDV 632
G D +V++W + + L+GHT+ + SLQFD +++V+G++D SIR+WD+ TG
Sbjct: 1131 GAYDYMVKIWHPERQECLHTLQGHTNRVYSLQFDGLHVVSGSLDTSIRVWDVETGNCKHT 1190
Query: 633 FAYEQPITS-LHFDLDKIVISNNEPTVKIYNRKDGN-HWFCGEDDPEQGNVDFVRYKHGY 690
Q +TS + + +V N + TVK+++ G + V +++ +
Sbjct: 1191 LMGHQSLTSGMELRQNILVSGNADSTVKVWDITTGQCLQTLSGPNKHHSAVTCLQFNSRF 1250
Query: 691 LVEGRSNGDINTWAI 705
+V +G + W +
Sbjct: 1251 VVTSSDDGTVKLWDV 1265
Score = 120 bits (301), Expect = 7e-27
Identities = 69/247 (27%), Positives = 128/247 (50%), Gaps = 44/247 (17%)
Query: 384 DSGSKITSLPKAHDEDITCLDFDMPFGTMCSAGSLDHSVKVWDLSKKKQIATLHGHLASI 443
DSG+ + +L + H + C+ G+ +GS D +++VWD+ + + L GHLA++
Sbjct: 1063 DSGACVHTL-QGHTSTVRCMHLH---GSKVVSGSRDATLRVWDIEQGSCLHVLVGHLAAV 1118
Query: 444 SCMQIDQYSTLITGGRDAVLKLWDIDKAMADEASNSSEDNDACLYTFDSHVDEITAISFD 503
C+Q D +++G D ++K+W ++ CL+T H + + ++ FD
Sbjct: 1119 RCVQYDG-KLIVSGAYDYMVKIWHPER-------------QECLHTLQGHTNRVYSLQFD 1164
Query: 504 GDNLVSGSQDRTVRQWDLNSGKCTQTIDISFATGPMRSQRNIPLRNSVLLTKEPPAIGAL 563
G ++VSGS D ++R WD+ +G C T+ G + LR ++L++
Sbjct: 1165 GLHVVSGSLDTSIRVWDVETGNCKHTL-----MGHQSLTSGMELRQNILVS--------- 1210
Query: 564 QCFDAALATGTKDGIVRLWDLRSGKVVRMLEG---HTDAITSLQFDSVNLVTGAMDRSIR 620
G D V++WD+ +G+ ++ L G H A+T LQF+S +VT + D +++
Sbjct: 1211 ---------GNADSTVKVWDITTGQCLQTLSGPNKHHSAVTCLQFNSRFVVTSSDDGTVK 1261
Query: 621 IWDLRTG 627
+WD++TG
Sbjct: 1262 LWDVKTG 1268
Score = 62.0 bits (149), Expect = 3e-09
Identities = 39/165 (23%), Positives = 80/165 (47%), Gaps = 8/165 (4%)
Query: 543 RNIPLRN-SVLLTKEPPAIGALQCFDAALATGTKDGIVRLWDLRSGKVVRMLEGHTDAIT 601
R+ P+R VL + I LQ + +G+ D +++W +GK +R L GHT +
Sbjct: 980 RSRPVRKPKVLKGHDDHVITCLQFSGNRIVSGSDDNTLKVWSAVNGKCLRTLVGHTGGVW 1039
Query: 602 SLQFDSVNLVTGAMDRSIRIWDLRTG-ILSDVFAYEQPITSLHFDLDKIVISNNEPTVKI 660
S Q +++G+ DR++++WD+ +G + + + + +H K+V + + T+++
Sbjct: 1040 SSQMSGNIIISGSTDRTLKVWDMDSGACVHTLQGHTSTVRCMHLHGSKVVSGSRDATLRV 1099
Query: 661 YNRKDGN--HWFCGEDDPEQGNVDFVRYKHGYLVEGRSNGDINTW 703
++ + G+ H G V V+Y +V G + + W
Sbjct: 1100 WDIEQGSCLHVLVG----HLAAVRCVQYDGKLIVSGAYDYMVKIW 1140
>Hs16117781 [R] KOG0274 Cdc4 and related F-box and WD-40 proteins
Length = 707
Score = 129 bits (323), Expect = 2e-29
Identities = 86/316 (27%), Positives = 147/316 (46%), Gaps = 49/316 (15%)
Query: 394 KAHDED-ITCLDFDMPFGTMCSAGSLDHSVKVWDLSKKKQIATLHGHLASISCMQIDQYS 452
K HD+ ITCL F G +GS D+++KVW K + TL GH + Q+ +
Sbjct: 377 KGHDDHVITCLQF---CGNRIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQMRD-N 432
Query: 453 TLITGGRDAVLKLWDIDKAMADEASNSSEDNDACLYTFDSHVDEITAISFDGDNLVSGSQ 512
+I+G D LK+W+ + C++T H + + +VSGS+
Sbjct: 433 IIISGSTDRTLKVWNAETG-------------ECIHTLYGHTSTVRCMHLHEKRVVSGSR 479
Query: 513 DRTVRQWDLNSGKCTQTIDISFATGPMRSQRNIPLRNSVLLTKEPPAIGALQCFDAALAT 572
D T+R WD+ +G+C +L A+ +Q + +
Sbjct: 480 DATLRVWDIETGQCLH-----------------------VLMGHVAAVRCVQYDGRRVVS 516
Query: 573 GTKDGIVRLWDLRSGKVVRMLEGHTDAITSLQFDSVNLVTGAMDRSIRIWDLRTGILSDV 632
G D +V++WD + + L+GHT+ + SLQFD +++V+G++D SIR+WD+ TG
Sbjct: 517 GAYDFMVKVWDPETETCLHTLQGHTNRVYSLQFDGIHVVSGSLDTSIRVWDVETGNCIHT 576
Query: 633 FAYEQPITSLHFDLDKIVISNN-EPTVKIYNRKDGNHWFCGE----DDPEQGNVDFVRYK 687
Q +TS D I++S N + TVKI++ K G C + + Q V +++
Sbjct: 577 LTGHQSLTSGMELKDNILVSGNADSTVKIWDIKTGQ---CLQTLQGPNKHQSAVTCLQFN 633
Query: 688 HGYLVEGRSNGDINTW 703
+++ +G + W
Sbjct: 634 KNFVITSSDDGTVKLW 649
Score = 120 bits (300), Expect = 9e-27
Identities = 61/216 (28%), Positives = 118/216 (54%), Gaps = 40/216 (18%)
Query: 415 AGSLDHSVKVWDLSKKKQIATLHGHLASISCMQIDQYSTLITGGRDAVLKLWDIDKAMAD 474
+GS D +++VWD+ + + L GH+A++ C+Q D +++G D ++K+WD
Sbjct: 476 SGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQYDG-RRVVSGAYDFMVKVWD------- 527
Query: 475 EASNSSEDNDACLYTFDSHVDEITAISFDGDNLVSGSQDRTVRQWDLNSGKCTQTIDISF 534
+ + CL+T H + + ++ FDG ++VSGS D ++R WD+ +G C T+
Sbjct: 528 ------PETETCLHTLQGHTNRVYSLQFDGIHVVSGSLDTSIRVWDVETGNCIHTL---- 577
Query: 535 ATGPMRSQRNIPLRNSVLLTKEPPAIGALQCFDAALATGTKDGIVRLWDLRSGKVVRMLE 594
TG + L++++L++ G D V++WD+++G+ ++ L+
Sbjct: 578 -TGHQSLTSGMELKDNILVS------------------GNADSTVKIWDIKTGQCLQTLQ 618
Query: 595 G---HTDAITSLQFDSVNLVTGAMDRSIRIWDLRTG 627
G H A+T LQF+ ++T + D ++++WDL+TG
Sbjct: 619 GPNKHQSAVTCLQFNKNFVITSSDDGTVKLWDLKTG 654
Score = 61.2 bits (147), Expect = 5e-09
Identities = 31/138 (22%), Positives = 71/138 (50%), Gaps = 8/138 (5%)
Query: 530 IDISFATGPMRSQRNIPLRNSVLLTKEPPAIGALQCFDAALATGTKDGIVRLWDLRSGKV 589
ID ++ G ++S + VL + I LQ + +G+ D +++W +GK
Sbjct: 361 IDTNWRRGELKSPK-------VLKGHDDHVITCLQFCGNRIVSGSDDNTLKVWSAVTGKC 413
Query: 590 VRMLEGHTDAITSLQFDSVNLVTGAMDRSIRIWDLRTG-ILSDVFAYEQPITSLHFDLDK 648
+R L GHT + S Q +++G+ DR++++W+ TG + ++ + + +H +
Sbjct: 414 LRTLVGHTGGVWSSQMRDNIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLHEKR 473
Query: 649 IVISNNEPTVKIYNRKDG 666
+V + + T+++++ + G
Sbjct: 474 VVSGSRDATLRVWDIETG 491
>Hs16117779 [R] KOG0274 Cdc4 and related F-box and WD-40 proteins
Length = 627
Score = 129 bits (323), Expect = 2e-29
Identities = 86/316 (27%), Positives = 147/316 (46%), Gaps = 49/316 (15%)
Query: 394 KAHDED-ITCLDFDMPFGTMCSAGSLDHSVKVWDLSKKKQIATLHGHLASISCMQIDQYS 452
K HD+ ITCL F G +GS D+++KVW K + TL GH + Q+ +
Sbjct: 297 KGHDDHVITCLQF---CGNRIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQMRD-N 352
Query: 453 TLITGGRDAVLKLWDIDKAMADEASNSSEDNDACLYTFDSHVDEITAISFDGDNLVSGSQ 512
+I+G D LK+W+ + C++T H + + +VSGS+
Sbjct: 353 IIISGSTDRTLKVWNAETG-------------ECIHTLYGHTSTVRCMHLHEKRVVSGSR 399
Query: 513 DRTVRQWDLNSGKCTQTIDISFATGPMRSQRNIPLRNSVLLTKEPPAIGALQCFDAALAT 572
D T+R WD+ +G+C +L A+ +Q + +
Sbjct: 400 DATLRVWDIETGQCLH-----------------------VLMGHVAAVRCVQYDGRRVVS 436
Query: 573 GTKDGIVRLWDLRSGKVVRMLEGHTDAITSLQFDSVNLVTGAMDRSIRIWDLRTGILSDV 632
G D +V++WD + + L+GHT+ + SLQFD +++V+G++D SIR+WD+ TG
Sbjct: 437 GAYDFMVKVWDPETETCLHTLQGHTNRVYSLQFDGIHVVSGSLDTSIRVWDVETGNCIHT 496
Query: 633 FAYEQPITSLHFDLDKIVISNN-EPTVKIYNRKDGNHWFCGE----DDPEQGNVDFVRYK 687
Q +TS D I++S N + TVKI++ K G C + + Q V +++
Sbjct: 497 LTGHQSLTSGMELKDNILVSGNADSTVKIWDIKTGQ---CLQTLQGPNKHQSAVTCLQFN 553
Query: 688 HGYLVEGRSNGDINTW 703
+++ +G + W
Sbjct: 554 KNFVITSSDDGTVKLW 569
Score = 120 bits (300), Expect = 9e-27
Identities = 61/216 (28%), Positives = 118/216 (54%), Gaps = 40/216 (18%)
Query: 415 AGSLDHSVKVWDLSKKKQIATLHGHLASISCMQIDQYSTLITGGRDAVLKLWDIDKAMAD 474
+GS D +++VWD+ + + L GH+A++ C+Q D +++G D ++K+WD
Sbjct: 396 SGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQYDG-RRVVSGAYDFMVKVWD------- 447
Query: 475 EASNSSEDNDACLYTFDSHVDEITAISFDGDNLVSGSQDRTVRQWDLNSGKCTQTIDISF 534
+ + CL+T H + + ++ FDG ++VSGS D ++R WD+ +G C T+
Sbjct: 448 ------PETETCLHTLQGHTNRVYSLQFDGIHVVSGSLDTSIRVWDVETGNCIHTL---- 497
Query: 535 ATGPMRSQRNIPLRNSVLLTKEPPAIGALQCFDAALATGTKDGIVRLWDLRSGKVVRMLE 594
TG + L++++L++ G D V++WD+++G+ ++ L+
Sbjct: 498 -TGHQSLTSGMELKDNILVS------------------GNADSTVKIWDIKTGQCLQTLQ 538
Query: 595 G---HTDAITSLQFDSVNLVTGAMDRSIRIWDLRTG 627
G H A+T LQF+ ++T + D ++++WDL+TG
Sbjct: 539 GPNKHQSAVTCLQFNKNFVITSSDDGTVKLWDLKTG 574
Score = 61.2 bits (147), Expect = 5e-09
Identities = 31/138 (22%), Positives = 71/138 (50%), Gaps = 8/138 (5%)
Query: 530 IDISFATGPMRSQRNIPLRNSVLLTKEPPAIGALQCFDAALATGTKDGIVRLWDLRSGKV 589
ID ++ G ++S + VL + I LQ + +G+ D +++W +GK
Sbjct: 281 IDTNWRRGELKSPK-------VLKGHDDHVITCLQFCGNRIVSGSDDNTLKVWSAVTGKC 333
Query: 590 VRMLEGHTDAITSLQFDSVNLVTGAMDRSIRIWDLRTG-ILSDVFAYEQPITSLHFDLDK 648
+R L GHT + S Q +++G+ DR++++W+ TG + ++ + + +H +
Sbjct: 334 LRTLVGHTGGVWSSQMRDNIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLHEKR 393
Query: 649 IVISNNEPTVKIYNRKDG 666
+V + + T+++++ + G
Sbjct: 394 VVSGSRDATLRVWDIETG 411
>SPAC57A10.05c [R] KOG0274 Cdc4 and related F-box and WD-40 proteins
Length = 605
Score = 112 bits (280), Expect = 2e-24
Identities = 79/287 (27%), Positives = 136/287 (46%), Gaps = 44/287 (15%)
Query: 396 HDEDITCLDFDMPFGTMCSAGSLDHSVKVWDLSKKKQIATLHGHLASISCMQIDQYSTLI 455
H + + CL + ++GS D ++++W+L+ +Q+A L GH + ++C+Q DQ LI
Sbjct: 272 HSDGVMCLQL---VRNILASGSYDATIRLWNLATFQQVALLEGHSSGVTCLQFDQCK-LI 327
Query: 456 TGGRDAVLKLWDIDKAMADEASNSSEDNDACLYTFDSHVDEITAISFDGDNLVSGSQDRT 515
+G D +++W+ +SE C+ H D + ++FD LVSGS D T
Sbjct: 328 SGSMDKTIRIWNY---------RTSE----CISILHGHTDSVLCLTFDSTLLVSGSADCT 374
Query: 516 VRQWDLNSGKCTQTIDISFATGPMRSQRNIPLRNSVLLTKEPPAIG-------------- 561
V+ W + GK I + TGP+ S R I R VL + I
Sbjct: 375 VKLWHFSGGK---RITLRGHTGPVNSVRIIRDRGLVLSGSDDSTIKIWSLETNTCLHTFS 431
Query: 562 -------ALQCFDAALATGTKDGIVRLWDLRSGKVVRMLEGHTDAITSLQFDSVNLVTGA 614
+L D+ L + + DG ++ WD+ K V L GH + + + D + L++GA
Sbjct: 432 AHIGPVQSLALADSRLFSCSLDGTIKQWDIEKKKCVHTLFGHIEGVWEIAADHLRLISGA 491
Query: 615 MDRSIRIWDLRTGILSDVFAYEQPITSLHFDLDKIVISNNEPTVKIY 661
D +++W+ + + + +P+TS+ D V+S +E KIY
Sbjct: 492 HDGVVKVWE-ACECVHTLKNHSEPVTSVALG-DCEVVSGSEDG-KIY 535
Score = 99.0 bits (245), Expect = 2e-20
Identities = 67/282 (23%), Positives = 120/282 (41%), Gaps = 58/282 (20%)
Query: 391 SLPKAHDEDITCLDFDMPFGTMCSAGSLDHSVKVWDLSKKKQIATLHGHLASISCMQIDQ 450
+L + H +TCL FD +GS+D ++++W+ + I+ LHGH S+ C+ D
Sbjct: 307 ALLEGHSSGVTCLQFDQ---CKLISGSMDKTIRIWNYRTSECISILHGHTDSVLCLTFDS 363
Query: 451 YSTLITGGRDAVLKLWDI----------------------DKAMADEASNSSE------D 482
+ L++G D +KLW D+ + S+ S +
Sbjct: 364 -TLLVSGSADCTVKLWHFSGGKRITLRGHTGPVNSVRIIRDRGLVLSGSDDSTIKIWSLE 422
Query: 483 NDACLYTFDSHVDEITAISFDGDNLVSGSQDRTVRQWDLNSGKCTQTIDISFATGPMRSQ 542
+ CL+TF +H+ + +++ L S S D T++QWD+ KC T
Sbjct: 423 TNTCLHTFSAHIGPVQSLALADSRLFSCSLDGTIKQWDIEKKKCVHT------------- 469
Query: 543 RNIPLRNSVLLTKEPPAIGALQCFDAALATGTKDGIVRLWDLRSGKVVRMLEGHTDAITS 602
L + + L +G DG+V++W+ + + V L+ H++ +TS
Sbjct: 470 ----------LFGHIEGVWEIAADHLRLISGAHDGVVKVWE--ACECVHTLKNHSEPVTS 517
Query: 603 LQFDSVNLVTGAMDRSIRIWDLRTG-ILSDVFAYEQPITSLH 643
+ +V+G+ D I +W S V PI+SL+
Sbjct: 518 VALGDCEVVSGSEDGKIYLWLFNNAPNESPVSTQSVPISSLN 559
Score = 82.8 bits (203), Expect = 2e-15
Identities = 47/156 (30%), Positives = 82/156 (52%), Gaps = 2/156 (1%)
Query: 551 VLLTKEPPAIGALQCFDAALATGTKDGIVRLWDLRSGKVVRMLEGHTDAITSLQFDSVNL 610
V+L+ + LQ LA+G+ D +RLW+L + + V +LEGH+ +T LQFD L
Sbjct: 267 VVLSGHSDGVMCLQLVRNILASGSYDATIRLWNLATFQQVALLEGHSSGVTCLQFDQCKL 326
Query: 611 VTGAMDRSIRIWDLRTG-ILSDVFAYEQPITSLHFDLDKIVISNNEPTVKIYNRKDGNHW 669
++G+MD++IRIW+ RT +S + + + L FD +V + + TVK+++ G
Sbjct: 327 ISGSMDKTIRIWNYRTSECISILHGHTDSVLCLTFDSTLLVSGSADCTVKLWHFSGGKRI 386
Query: 670 FCGEDDPEQGNVDFVRYKHGYLVEGRSNGDINTWAI 705
+V +R G ++ G + I W++
Sbjct: 387 TLRGHTGPVNSVRIIR-DRGLVLSGSDDSTIKIWSL 421
Score = 63.5 bits (153), Expect = 1e-09
Identities = 38/126 (30%), Positives = 64/126 (50%), Gaps = 21/126 (16%)
Query: 417 SLDHSVKVWDLSKKKQIATLHGHLASISCMQIDQYSTLITGGRDAVLKLWDIDKAMADEA 476
SLD ++K WD+ KKK + TL GH+ + + D + LI+G D V+K+W+ +
Sbjct: 451 SLDGTIKQWDIEKKKCVHTLFGHIEGVWEIAAD-HLRLISGAHDGVVKVWEACE------ 503
Query: 477 SNSSEDNDACLYTFDSHVDEITAISFDGDNLVSGSQDRTVRQWDLN-----SGKCTQTID 531
C++T +H + +T+++ +VSGS+D + W N S TQ++
Sbjct: 504 ---------CVHTLKNHSEPVTSVALGDCEVVSGSEDGKIYLWLFNNAPNESPVSTQSVP 554
Query: 532 ISFATG 537
IS G
Sbjct: 555 ISSLNG 560
>Hs18544419 [A] KOG0272 U4/U6 small nuclear ribonucleoprotein Prp4 (contains
WD40 repeats)
Length = 446
Score = 111 bits (277), Expect = 4e-24
Identities = 83/272 (30%), Positives = 127/272 (46%), Gaps = 46/272 (16%)
Query: 385 SGSKITSLPKAHDEDITCLDFDMPFGTMCSAGSLDHSVKVWDLSKKKQIATLHGHLASIS 444
SG ++ +L + H + + F+ P+G + GS D + K+W + K T GH A I
Sbjct: 40 SGEELNTL-EGHRNVVYAIAFNNPYGDKIATGSFDKTCKLWSVETGKCYHTFRGHTAEIV 98
Query: 445 CMQIDQYSTLI-TGGRDAVLKLWDIDKAMADEASNSSEDNDACLYTFDSHVDEITAISFD 503
C+ + STL+ TG D KLWDI N +YT H EI ++SF+
Sbjct: 99 CLSFNPQSTLVATGSMDTTAKLWDI-------------QNGEEVYTLRGHSAEIISLSFN 145
Query: 504 --GDNLVSGSQDRTVRQWDLNSGK--------CTQTIDISF-------ATGPMRSQRNIP 546
GD +++GS D TV WD ++G+ C + SF TG M +
Sbjct: 146 TSGDRIITGSFDHTVVVWDADTGRKVNILIGHCAEISSASFNWDCSLILTGSM--DKTCK 203
Query: 547 LRNS------VLLTKEPPAIGALQCFD---AALATGTKDGIVRLWDLRSGKVVRMLEGHT 597
L ++ LT I CFD +AT + DG R++ + K + LEGH
Sbjct: 204 LWDATNGKCVATLTGHDDEI-LDSCFDYTGKLIATASADGTARIFSAATRKCIAKLEGHE 262
Query: 598 DAITSLQFD--SVNLVTGAMDRSIRIWDLRTG 627
I+ + F+ +L+TG+ D++ RIWD +TG
Sbjct: 263 GEISKISFNPQGNHLLTGSSDKTARIWDAQTG 294
Score = 88.2 bits (217), Expect = 4e-17
Identities = 66/238 (27%), Positives = 111/238 (45%), Gaps = 42/238 (17%)
Query: 437 HGHLASISCMQIDQYSTLITGGRDAVLKLWDIDKAMADEASNSSEDNDACLYTFDSHVDE 496
HG L + S +D + ITG D KLWD + S E+ L T + H +
Sbjct: 7 HGELKTKSIDLLDLGPSFITGSYDRTCKLWD---------TASGEE----LNTLEGHRNV 53
Query: 497 ITAISFD---GDNLVSGSQDRTVRQWDLNSGKCTQTIDISFATGPMRSQRNIPLRNSVLL 553
+ AI+F+ GD + +GS D+T + W + +GKC T A V L
Sbjct: 54 VYAIAFNNPYGDKIATGSFDKTCKLWSVETGKCYHTFRGHTA-------------EIVCL 100
Query: 554 TKEPPAIGALQCFDAALATGTKDGIVRLWDLRSGKVVRMLEGHTDAITSLQFDSV--NLV 611
+ P + +ATG+ D +LWD+++G+ V L GH+ I SL F++ ++
Sbjct: 101 SFNPQS--------TLVATGSMDTTAKLWDIQNGEEVYTLRGHSAEIISLSFNTSGDRII 152
Query: 612 TGAMDRSIRIWDLRTGILSDVF---AYEQPITSLHFDLDKIVISNNEPTVKIYNRKDG 666
TG+ D ++ +WD TG ++ E S ++D I+ + + T K+++ +G
Sbjct: 153 TGSFDHTVVVWDADTGRKVNILIGHCAEISSASFNWDCSLILTGSMDKTCKLWDATNG 210
Score = 76.3 bits (186), Expect = 2e-13
Identities = 54/179 (30%), Positives = 83/179 (46%), Gaps = 34/179 (18%)
Query: 385 SGSKITSLPKAHDEDITCLDFDMPFGTMCSAGSLDHSVKVWDLSKKKQIATLHGHLASIS 444
+G ++ +L + H +I L F+ G GS DH+V VWD +++ L GH A IS
Sbjct: 125 NGEEVYTL-RGHSAEIISLSFNTS-GDRIITGSFDHTVVVWDADTGRKVNILIGHCAEIS 182
Query: 445 CMQID-QYSTLITGGRDAVLKLWDID--KAMADEASNSSEDNDACL-YT----------- 489
+ S ++TG D KLWD K +A + E D+C YT
Sbjct: 183 SASFNWDCSLILTGSMDKTCKLWDATNGKCVATLTGHDDEILDSCFDYTGKLIATASADG 242
Query: 490 ---------------FDSHVDEITAISFD--GDNLVSGSQDRTVRQWDLNSGKCTQTID 531
+ H EI+ ISF+ G++L++GS D+T R WD +G+C Q ++
Sbjct: 243 TARIFSAATRKCIAKLEGHEGEISKISFNPQGNHLLTGSSDKTARIWDAQTGQCLQVLE 301
Score = 65.9 bits (159), Expect = 2e-10
Identities = 47/170 (27%), Positives = 80/170 (46%), Gaps = 29/170 (17%)
Query: 504 GDNLVSGSQDRTVRQWDLNSGKCTQTIDISFATGPMRSQRNIPLRNSVLLTKEPPAIGAL 563
G + ++GS DRT + WD SG+ T++ RN+ AI
Sbjct: 21 GPSFITGSYDRTCKLWDTASGEELNTLE---------GHRNVVY-----------AIAFN 60
Query: 564 QCFDAALATGTKDGIVRLWDLRSGKVVRMLEGHTDAITSLQFD--SVNLVTGAMDRSIRI 621
+ +ATG+ D +LW + +GK GHT I L F+ S + TG+MD + ++
Sbjct: 61 NPYGDKIATGSFDKTCKLWSVETGKCYHTFRGHTAEIVCLSFNPQSTLVATGSMDTTAKL 120
Query: 622 WDLRTGILSDVF---AYEQPITSLHFDL--DKIVISNNEPTVKIYNRKDG 666
WD++ G +V+ + I SL F+ D+I+ + + TV +++ G
Sbjct: 121 WDIQNG--EEVYTLRGHSAEIISLSFNTSGDRIITGSFDHTVVVWDADTG 168
>Hs16306498 [S] KOG0281 Beta-TrCP (transducin repeats containing)/Slimb
proteins
Length = 508
Score = 110 bits (276), Expect = 6e-24
Identities = 75/307 (24%), Positives = 141/307 (45%), Gaps = 67/307 (21%)
Query: 396 HDEDITCLDFDMPFGTMCSAGSLDHSVKVWDLSKKKQIATLHGHLASISCMQIDQYSTLI 455
+ + + CL +D +G D+S+K+WD + + + L GH S+ C+Q D+ ++
Sbjct: 205 NSKGVYCLQYD---DEKIISGLRDNSIKIWDKTSLECLKVLTGHTGSVLCLQYDE-RVIV 260
Query: 456 TGGRDAVLKLWDIDKAMA-------DEA------SNS-----SEDNDACLYTFDSHVD-- 495
TG D+ +++WD++ +EA SN S+D ++ S D
Sbjct: 261 TGSSDSTVRVWDVNTGEVLNTLIHHNEAVLHLRFSNGLMVTCSKDRSIAVWDMASATDIT 320
Query: 496 ----------EITAISFDGDNLVSGSQDRTVRQWDLNSGKCTQTIDISFATGPMRSQRNI 545
+ + FD +VS S DRT++ W ++ + +T++ G R
Sbjct: 321 LRRVLVGHRAAVNVVDFDDKYIVSASGDRTIKVWSTSTCEFVRTLN-----GHKR----- 370
Query: 546 PLRNSVLLTKEPPAIGALQCFDAALATGTKDGIVRLWDLRSGKVVRMLEGHTDAITSLQF 605
I LQ D + +G+ D +RLWD+ G +R+LEGH + + ++F
Sbjct: 371 -------------GIACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRF 417
Query: 606 DSVNLVTGAMDRSIRIWDLRTGI----------LSDVFAYEQPITSLHFDLDKIVISNNE 655
D+ +V+GA D I++WDL+ + L + + + L FD +I+ S+++
Sbjct: 418 DNKRIVSGAYDGKIKVWDLQAALDPRAPASTLCLRTLVEHSGRVFRLQFDEFQIISSSHD 477
Query: 656 PTVKIYN 662
T+ I++
Sbjct: 478 DTILIWD 484
Score = 78.6 bits (192), Expect = 3e-14
Identities = 48/213 (22%), Positives = 100/213 (46%), Gaps = 29/213 (13%)
Query: 497 ITAISFDGDNLVSGSQDRTVRQWDLNSGKCTQTIDISFATGPMRSQRNIPLRNSVLLTKE 556
+ + +D + ++SG +D +++ WD S +C + +LT
Sbjct: 209 VYCLQYDDEKIISGLRDNSIKIWDKTSLECLK-----------------------VLTGH 245
Query: 557 PPAIGALQCFDAALATGTKDGIVRLWDLRSGKVVRMLEGHTDAITSLQFDSVNLVTGAMD 616
++ LQ + + TG+ D VR+WD+ +G+V+ L H +A+ L+F + +VT + D
Sbjct: 246 TGSVLCLQYDERVIVTGSSDSTVRVWDVNTGEVLNTLIHHNEAVLHLRFSNGLMVTCSKD 305
Query: 617 RSIRIWDLRTG----ILSDVFAYEQPITSLHFDLDKIVISNNEPTVKIYNRKDGNHWFCG 672
RSI +WD+ + + + + + + FD IV ++ + T+K+++ F
Sbjct: 306 RSIAVWDMASATDITLRRVLVGHRAAVNVVDFDDKYIVSASGDRTIKVWSTSTCE--FVR 363
Query: 673 EDDPEQGNVDFVRYKHGYLVEGRSNGDINTWAI 705
+ + + ++Y+ +V G S+ I W I
Sbjct: 364 TLNGHKRGIACLQYRDRLVVSGSSDNTIRLWDI 396
>Hs16306496 [S] KOG0281 Beta-TrCP (transducin repeats containing)/Slimb
proteins
Length = 529
Score = 110 bits (276), Expect = 6e-24
Identities = 75/307 (24%), Positives = 141/307 (45%), Gaps = 67/307 (21%)
Query: 396 HDEDITCLDFDMPFGTMCSAGSLDHSVKVWDLSKKKQIATLHGHLASISCMQIDQYSTLI 455
+ + + CL +D +G D+S+K+WD + + + L GH S+ C+Q D+ ++
Sbjct: 226 NSKGVYCLQYD---DEKIISGLRDNSIKIWDKTSLECLKVLTGHTGSVLCLQYDE-RVIV 281
Query: 456 TGGRDAVLKLWDIDKAMA-------DEA------SNS-----SEDNDACLYTFDSHVD-- 495
TG D+ +++WD++ +EA SN S+D ++ S D
Sbjct: 282 TGSSDSTVRVWDVNTGEVLNTLIHHNEAVLHLRFSNGLMVTCSKDRSIAVWDMASATDIT 341
Query: 496 ----------EITAISFDGDNLVSGSQDRTVRQWDLNSGKCTQTIDISFATGPMRSQRNI 545
+ + FD +VS S DRT++ W ++ + +T++ G R
Sbjct: 342 LRRVLVGHRAAVNVVDFDDKYIVSASGDRTIKVWSTSTCEFVRTLN-----GHKR----- 391
Query: 546 PLRNSVLLTKEPPAIGALQCFDAALATGTKDGIVRLWDLRSGKVVRMLEGHTDAITSLQF 605
I LQ D + +G+ D +RLWD+ G +R+LEGH + + ++F
Sbjct: 392 -------------GIACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRF 438
Query: 606 DSVNLVTGAMDRSIRIWDLRTGI----------LSDVFAYEQPITSLHFDLDKIVISNNE 655
D+ +V+GA D I++WDL+ + L + + + L FD +I+ S+++
Sbjct: 439 DNKRIVSGAYDGKIKVWDLQAALDPRAPASTLCLRTLVEHSGRVFRLQFDEFQIISSSHD 498
Query: 656 PTVKIYN 662
T+ I++
Sbjct: 499 DTILIWD 505
Score = 78.6 bits (192), Expect = 3e-14
Identities = 48/213 (22%), Positives = 100/213 (46%), Gaps = 29/213 (13%)
Query: 497 ITAISFDGDNLVSGSQDRTVRQWDLNSGKCTQTIDISFATGPMRSQRNIPLRNSVLLTKE 556
+ + +D + ++SG +D +++ WD S +C + +LT
Sbjct: 230 VYCLQYDDEKIISGLRDNSIKIWDKTSLECLK-----------------------VLTGH 266
Query: 557 PPAIGALQCFDAALATGTKDGIVRLWDLRSGKVVRMLEGHTDAITSLQFDSVNLVTGAMD 616
++ LQ + + TG+ D VR+WD+ +G+V+ L H +A+ L+F + +VT + D
Sbjct: 267 TGSVLCLQYDERVIVTGSSDSTVRVWDVNTGEVLNTLIHHNEAVLHLRFSNGLMVTCSKD 326
Query: 617 RSIRIWDLRTG----ILSDVFAYEQPITSLHFDLDKIVISNNEPTVKIYNRKDGNHWFCG 672
RSI +WD+ + + + + + + FD IV ++ + T+K+++ F
Sbjct: 327 RSIAVWDMASATDITLRRVLVGHRAAVNVVDFDDKYIVSASGDRTIKVWSTSTCE--FVR 384
Query: 673 EDDPEQGNVDFVRYKHGYLVEGRSNGDINTWAI 705
+ + + ++Y+ +V G S+ I W I
Sbjct: 385 TLNGHKRGIACLQYRDRLVVSGSSDNTIRLWDI 417
>Hs16306494 [S] KOG0281 Beta-TrCP (transducin repeats containing)/Slimb
proteins
Length = 542
Score = 110 bits (276), Expect = 6e-24
Identities = 75/307 (24%), Positives = 141/307 (45%), Gaps = 67/307 (21%)
Query: 396 HDEDITCLDFDMPFGTMCSAGSLDHSVKVWDLSKKKQIATLHGHLASISCMQIDQYSTLI 455
+ + + CL +D +G D+S+K+WD + + + L GH S+ C+Q D+ ++
Sbjct: 239 NSKGVYCLQYD---DEKIISGLRDNSIKIWDKTSLECLKVLTGHTGSVLCLQYDE-RVIV 294
Query: 456 TGGRDAVLKLWDIDKAMA-------DEA------SNS-----SEDNDACLYTFDSHVD-- 495
TG D+ +++WD++ +EA SN S+D ++ S D
Sbjct: 295 TGSSDSTVRVWDVNTGEVLNTLIHHNEAVLHLRFSNGLMVTCSKDRSIAVWDMASATDIT 354
Query: 496 ----------EITAISFDGDNLVSGSQDRTVRQWDLNSGKCTQTIDISFATGPMRSQRNI 545
+ + FD +VS S DRT++ W ++ + +T++ G R
Sbjct: 355 LRRVLVGHRAAVNVVDFDDKYIVSASGDRTIKVWSTSTCEFVRTLN-----GHKR----- 404
Query: 546 PLRNSVLLTKEPPAIGALQCFDAALATGTKDGIVRLWDLRSGKVVRMLEGHTDAITSLQF 605
I LQ D + +G+ D +RLWD+ G +R+LEGH + + ++F
Sbjct: 405 -------------GIACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRF 451
Query: 606 DSVNLVTGAMDRSIRIWDLRTGI----------LSDVFAYEQPITSLHFDLDKIVISNNE 655
D+ +V+GA D I++WDL+ + L + + + L FD +I+ S+++
Sbjct: 452 DNKRIVSGAYDGKIKVWDLQAALDPRAPASTLCLRTLVEHSGRVFRLQFDEFQIISSSHD 511
Query: 656 PTVKIYN 662
T+ I++
Sbjct: 512 DTILIWD 518
Score = 78.6 bits (192), Expect = 3e-14
Identities = 48/213 (22%), Positives = 100/213 (46%), Gaps = 29/213 (13%)
Query: 497 ITAISFDGDNLVSGSQDRTVRQWDLNSGKCTQTIDISFATGPMRSQRNIPLRNSVLLTKE 556
+ + +D + ++SG +D +++ WD S +C + +LT
Sbjct: 243 VYCLQYDDEKIISGLRDNSIKIWDKTSLECLK-----------------------VLTGH 279
Query: 557 PPAIGALQCFDAALATGTKDGIVRLWDLRSGKVVRMLEGHTDAITSLQFDSVNLVTGAMD 616
++ LQ + + TG+ D VR+WD+ +G+V+ L H +A+ L+F + +VT + D
Sbjct: 280 TGSVLCLQYDERVIVTGSSDSTVRVWDVNTGEVLNTLIHHNEAVLHLRFSNGLMVTCSKD 339
Query: 617 RSIRIWDLRTG----ILSDVFAYEQPITSLHFDLDKIVISNNEPTVKIYNRKDGNHWFCG 672
RSI +WD+ + + + + + + FD IV ++ + T+K+++ F
Sbjct: 340 RSIAVWDMASATDITLRRVLVGHRAAVNVVDFDDKYIVSASGDRTIKVWSTSTCE--FVR 397
Query: 673 EDDPEQGNVDFVRYKHGYLVEGRSNGDINTWAI 705
+ + + ++Y+ +V G S+ I W I
Sbjct: 398 TLNGHKRGIACLQYRDRLVVSGSSDNTIRLWDI 430
>7300706 [S] KOG0281 Beta-TrCP (transducin repeats containing)/Slimb
proteins
Length = 510
Score = 109 bits (273), Expect = 1e-23
Identities = 78/307 (25%), Positives = 143/307 (46%), Gaps = 67/307 (21%)
Query: 396 HDEDITCLDFDMPFGTMCSAGSLDHSVKVWDLSKKKQIATLHGHLASISCMQIDQYSTLI 455
+ + + CL +D G + S G D+++K+WD + + + TL GH S+ C+Q D +I
Sbjct: 209 NSKGVYCLQYDD--GKIVS-GLRDNTIKIWDRTDLQCVKTLMGHTGSVLCLQYDD-KVII 264
Query: 456 TGGRDAVLKLWDID------------KAMADEASNS------SEDNDACLYTFDS----- 492
+G D+ +++WD++ +A+ N+ S+D ++ S
Sbjct: 265 SGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFNNGMMVTCSKDRSIAVWDMTSPSEIT 324
Query: 493 -------HVDEITAISFDGDNLVSGSQDRTVRQWDLNSGKCTQTIDISFATGPMRSQRNI 545
H + + FD +VS S DRT++ W +S + +T++ G R
Sbjct: 325 LRRVLVGHRAAVNVVDFDEKYIVSASGDRTIKVWSTSSCEFVRTLN-----GHKRG---- 375
Query: 546 PLRNSVLLTKEPPAIGALQCFDAALATGTKDGIVRLWDLRSGKVVRMLEGHTDAITSLQF 605
I LQ D + +G+ D +RLWD+ G +R+LEGH + + ++F
Sbjct: 376 --------------IACLQYRDRLVVSGSSDNSIRLWDIECGACLRVLEGHEELVRCIRF 421
Query: 606 DSVNLVTGAMDRSIRIWDL----------RTGILSDVFAYEQPITSLHFDLDKIVISNNE 655
D+ +V+GA D I++WDL T L+ + + + L FD +IV S+++
Sbjct: 422 DTKRIVSGAYDGKIKVWDLVAALDPRAASNTLCLNTLVEHTGRVFRLQFDEFQIVSSSHD 481
Query: 656 PTVKIYN 662
T+ I++
Sbjct: 482 DTILIWD 488
Score = 62.4 bits (150), Expect = 2e-09
Identities = 31/133 (23%), Positives = 72/133 (53%), Gaps = 2/133 (1%)
Query: 531 DISFATGPMRSQRNIPLRNSVLLTKEPPAIGALQCFDAALATGTKDGIVRLWDLRSGKVV 590
DI R+ R++ LR ++ + LQ D + +G +D +++WD + V
Sbjct: 185 DIDSIENNWRTGRHM-LRRINCRSENSKGVYCLQYDDGKIVSGLRDNTIKIWDRTDLQCV 243
Query: 591 RMLEGHTDAITSLQFDSVNLVTGAMDRSIRIWDLRTG-ILSDVFAYEQPITSLHFDLDKI 649
+ L GHT ++ LQ+D +++G+ D ++R+WD+ TG +++ + + + + L F+ +
Sbjct: 244 KTLMGHTGSVLCLQYDDKVIISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFNNGMM 303
Query: 650 VISNNEPTVKIYN 662
V + + ++ +++
Sbjct: 304 VTCSKDRSIAVWD 316
>SPAC4D7.03 [R] KOG0274 Cdc4 and related F-box and WD-40 proteins
Length = 703
Score = 108 bits (269), Expect = 4e-23
Identities = 80/274 (29%), Positives = 127/274 (46%), Gaps = 43/274 (15%)
Query: 415 AGSLDHSVKVWDLSKKKQIATLHGHLASISCMQIDQYSTLI---------------TGGR 459
+GS+D +V+VW++ K K GH++ I C++I S LI +G R
Sbjct: 406 SGSIDKTVRVWNIEKAKCTHIFRGHISIIRCLEILVPSRLIRHGVEIVEPDQPYIVSGSR 465
Query: 460 DAVLKLWDI----DKAMADEASNSS---EDNDACLYTFDSHVDEITAISFDGDNLVSGSQ 512
D L++W + D + +NS E N ++T H D + IS GD LVSGS
Sbjct: 466 DHTLRVWKLPKNTDPPYLPDNTNSIDRWEKNPYFVHTLIGHTDSVRTISGYGDILVSGSY 525
Query: 513 DRTVRQWDLNSGKCTQTIDISFATGPMRSQRNIPLRNSVLLTKEPPAIGALQCFDAALAT 572
D ++R W +++G+C + R LR +L + I +
Sbjct: 526 DSSIRIWRVSTGECLYHL------------RGHSLRIYSVLYEPERNI---------CIS 564
Query: 573 GTKDGIVRLWDLRSGKVVRMLEGHTDAITSLQFDSVNLVTGAMDRSIRIWDLRTGILSDV 632
G+ D +R+WDL +G +LEGH +T L L++G+ D +IRIWDL TG V
Sbjct: 565 GSMDKSIRVWDLSTGTCKYVLEGHDAFVTLLNVFQNRLISGSADSTIRIWDLNTGKPLMV 624
Query: 633 FAYEQPITSLHFDLDKIVISNNEPTVKIYNRKDG 666
S + +IS N+ +VK+++ + G
Sbjct: 625 LPSNSGYISSFVSDEHKIISGNDGSVKLWDVRTG 658
Score = 77.8 bits (190), Expect = 5e-14
Identities = 60/252 (23%), Positives = 116/252 (45%), Gaps = 36/252 (14%)
Query: 434 ATLHGHLASISCMQIDQYSTLITGGRDAVLKLWDIDKAMADEASNSSEDNDACLYTFDSH 493
A L GH + ++I + +TL++G D +++W+I+KA C + F H
Sbjct: 385 ARLEGHKEGVWAVKIHE-NTLVSGSIDKTVRVWNIEKA-------------KCTHIFRGH 430
Query: 494 VDEITAISF----------------DGDNLVSGSQDRTVRQWDLNSGKCTQTIDISFATG 537
+ I + D +VSGS+D T+R W L K T + T
Sbjct: 431 ISIIRCLEILVPSRLIRHGVEIVEPDQPYIVSGSRDHTLRVWKL--PKNTDPPYLPDNTN 488
Query: 538 PMRSQRNIPLRNSVLLTKEPPAIGALQCFDAALATGTKDGIVRLWDLRSGKVVRMLEGHT 597
+ P L+ ++ + + L +G+ D +R+W + +G+ + L GH+
Sbjct: 489 SIDRWEKNPYFVHTLI-GHTDSVRTISGYGDILVSGSYDSSIRIWRVSTGECLYHLRGHS 547
Query: 598 DAITSLQFDSVN--LVTGAMDRSIRIWDLRTGILSDVF-AYEQPITSLHFDLDKIVISNN 654
I S+ ++ ++G+MD+SIR+WDL TG V ++ +T L+ ++++ +
Sbjct: 548 LRIYSVLYEPERNICISGSMDKSIRVWDLSTGTCKYVLEGHDAFVTLLNVFQNRLISGSA 607
Query: 655 EPTVKIYNRKDG 666
+ T++I++ G
Sbjct: 608 DSTIRIWDLNTG 619
Score = 77.0 bits (188), Expect = 9e-14
Identities = 54/204 (26%), Positives = 93/204 (45%), Gaps = 38/204 (18%)
Query: 409 FGTMCSAGSLDHSVKVWDLSKKKQIATLHGHLASI-SCMQIDQYSTLITGGRDAVLKLWD 467
+G + +GS D S+++W +S + + L GH I S + + + I+G D +++WD
Sbjct: 516 YGDILVSGSYDSSIRIWRVSTGECLYHLRGHSLRIYSVLYEPERNICISGSMDKSIRVWD 575
Query: 468 IDKAMADEASNSSEDNDACLYTFDSHVDEITAISFDGDNLVSGSQDRTVRQWDLNSGKCT 527
+ C Y + H +T ++ + L+SGS D T+R WDLN+GK
Sbjct: 576 LSTG-------------TCKYVLEGHDAFVTLLNVFQNRLISGSADSTIRIWDLNTGK-- 620
Query: 528 QTIDISFATGPMRSQRNIPLRNSVLLTKEPPAIGALQCFDAALATGTKDGIVRLWDLRSG 587
PL ++L I + + + +G DG V+LWD+R+G
Sbjct: 621 ------------------PL---MVLPSNSGYISSFVSDEHKIISGN-DGSVKLWDVRTG 658
Query: 588 KVVRMLEGHTDAITSLQFDSVNLV 611
K++R L I + FD++ V
Sbjct: 659 KLLRFLLTDLTKIWHVDFDAMRCV 682
Score = 57.8 bits (138), Expect = 6e-08
Identities = 34/118 (28%), Positives = 61/118 (50%), Gaps = 15/118 (12%)
Query: 408 PFGTMCSAGSLDHSVKVWDLSKKKQIATLHGHLASISCMQIDQYSTLITGGRDAVLKLWD 467
P +C +GS+D S++VWDLS L GH A ++ + + Q + LI+G D+ +++WD
Sbjct: 557 PERNICISGSMDKSIRVWDLSTGTCKYVLEGHDAFVTLLNVFQ-NRLISGSADSTIRIWD 615
Query: 468 IDKAMADEASNSSEDNDACLYTFDSHVDEITAISFDGDNLVSGSQDRTVRQWDLNSGK 525
++ L S+ I++ D ++SG+ D +V+ WD+ +GK
Sbjct: 616 LNTGKP-------------LMVLPSNSGYISSFVSDEHKIISGN-DGSVKLWDVRTGK 659
Score = 56.2 bits (134), Expect = 2e-07
Identities = 53/236 (22%), Positives = 103/236 (43%), Gaps = 32/236 (13%)
Query: 491 DSHVDEITAISFDGDNLVSGSQDRTVRQWDLNSGKCTQTIDISFATGPMRSQRNIPLRNS 550
+ H + + A+ + LVSGS D+TVR W++ KCT G + R + +
Sbjct: 388 EGHKEGVWAVKIHENTLVSGSIDKTVRVWNIEKAKCTHIF-----RGHISIIRCLEILVP 442
Query: 551 VLLTKEPPAIGALQCFDAALATGTKDGIVRLWDL--------------------RSGKVV 590
L + + ++ + +G++D +R+W L ++ V
Sbjct: 443 SRLIRH--GVEIVEPDQPYIVSGSRDHTLRVWKLPKNTDPPYLPDNTNSIDRWEKNPYFV 500
Query: 591 RMLEGHTDAITSLQFDSVNLVTGAMDRSIRIWDLRTG-ILSDVFAYEQPITSLHFDLDK- 648
L GHTD++ ++ LV+G+ D SIRIW + TG L + + I S+ ++ ++
Sbjct: 501 HTLIGHTDSVRTISGYGDILVSGSYDSSIRIWRVSTGECLYHLRGHSLRIYSVLYEPERN 560
Query: 649 IVISNN-EPTVKIYNRKDGNHWFCGEDDPEQGNVDFVRYKHGYLVEGRSNGDINTW 703
I IS + + ++++++ G + E V + L+ G ++ I W
Sbjct: 561 ICISGSMDKSIRVWDLSTGTCKYVLEG--HDAFVTLLNVFQNRLISGSADSTIRIW 614
>SPAC29E6.01 [S] KOG0281 Beta-TrCP (transducin repeats containing)/Slimb
proteins
Length = 506
Score = 107 bits (268), Expect = 5e-23
Identities = 66/275 (24%), Positives = 128/275 (46%), Gaps = 38/275 (13%)
Query: 396 HDEDITCLDFDMPFGTMCSAGSLDHSVKVWDLSKKKQIATLHGHLASISCMQIDQYSTLI 455
H + CLDF + S GS D ++ +WD ++ + GH ++ + + + + +I
Sbjct: 260 HSGSVLCLDFCRRRNLLVS-GSSDSTIIIWDWQNRRPLKVYFGHTDNVLGVVVSE-NYII 317
Query: 456 TGGRDAVLKLWDIDKAMADEASNSSEDNDACLYTFDSHVDEITAISFDGDN--LVSGSQD 513
+ RD ++W +D ++ +AC++ H+ + ++ + +V+ S D
Sbjct: 318 SSSRDHTARVWRLD---------ATSPAEACMHVLRGHLASVNSVQYSSKTGLIVTASSD 368
Query: 514 RTVRQWDLNSGKCTQTIDISFATGPMRSQRNIPLRNSVLLTKEPPAIGALQCFDAALATG 573
RT+R WD+ +G C + I QR I Q + +G
Sbjct: 369 RTLRTWDITTGHCIRIIHAH--------QRGI---------------ACAQYNGKFIVSG 405
Query: 574 TKDGIVRLWDLRSGKVVRMLEGHTDAITSLQFDSVNLVTGAMDRSIRIWDLRTGILSDVF 633
+ D +R+++ SGK++RML+GH D I +++F+ +V+G D ++RIW+ TG V
Sbjct: 406 SSDLTIRIFEASSGKLLRMLQGHEDLIRTVRFNDEKIVSGGYDGTVRIWNFNTGEQHCVL 465
Query: 634 --AYEQPITSLHFDLDKIVISNNEPTVKIYNRKDG 666
+ + L FD +I+ + + ++N DG
Sbjct: 466 HNSRNSRVFGLQFDHRRIIACTHSSEILVWNFDDG 500
>Hs4502477 [S] KOG0281 Beta-TrCP (transducin repeats containing)/Slimb
proteins
Length = 569
Score = 106 bits (265), Expect = 1e-22
Identities = 77/297 (25%), Positives = 137/297 (45%), Gaps = 55/297 (18%)
Query: 400 ITCLDFDMPFGTMCSAGSLDHSVKVWDLSKKKQIATLHGHLASISCMQIDQYSTLITGGR 459
+ CL +D +G D+++K+WD + + L GH S+ C+Q D+ +ITG
Sbjct: 270 VYCLQYD---DQKIVSGLRDNTIKIWDKNTLECKRILTGHTGSVLCLQYDE-RVIITGSS 325
Query: 460 DAVLKLWDIDKAMADEASNSSEDNDACLYTFDSHVDEITAISFDGDNLVSGSQDRTVRQW 519
D+ +++WD+ N+ E L T H + + + F+ +V+ S+DR++ W
Sbjct: 326 DSTVRVWDV---------NTGE----MLNTLIHHCEAVLHLRFNNGMMVTCSKDRSIAVW 372
Query: 520 DLNSGK-------------CTQTID-----ISFATGPMRSQRNIPLRNSVL------LTK 555
D+ S +D I A+G R I + N+ L
Sbjct: 373 DMASPTDITLRRVLVGHRAAVNVVDFDDKYIVSASG----DRTIKVWNTSTCEFVRTLNG 428
Query: 556 EPPAIGALQCFDAALATGTKDGIVRLWDLRSGKVVRMLEGHTDAITSLQFDSVNLVTGAM 615
I LQ D + +G+ D +RLWD+ G +R+LEGH + + ++FD+ +V+GA
Sbjct: 429 HKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDNKRIVSGAY 488
Query: 616 DRSIRIWDLRTGI----------LSDVFAYEQPITSLHFDLDKIVISNNEPTVKIYN 662
D I++WDL + L + + + L FD +IV S+++ T+ I++
Sbjct: 489 DGKIKVWDLVAALDPRAPAGTLCLRTLVEHSGRVFRLQFDEFQIVSSSHDDTILIWD 545
Score = 81.3 bits (199), Expect = 5e-15
Identities = 50/213 (23%), Positives = 101/213 (46%), Gaps = 29/213 (13%)
Query: 497 ITAISFDGDNLVSGSQDRTVRQWDLNSGKCTQTIDISFATGPMRSQRNIPLRNSVLLTKE 556
+ + +D +VSG +D T++ WD N+ +C + +LT
Sbjct: 270 VYCLQYDDQKIVSGLRDNTIKIWDKNTLECKR-----------------------ILTGH 306
Query: 557 PPAIGALQCFDAALATGTKDGIVRLWDLRSGKVVRMLEGHTDAITSLQFDSVNLVTGAMD 616
++ LQ + + TG+ D VR+WD+ +G+++ L H +A+ L+F++ +VT + D
Sbjct: 307 TGSVLCLQYDERVIITGSSDSTVRVWDVNTGEMLNTLIHHCEAVLHLRFNNGMMVTCSKD 366
Query: 617 RSIRIWDLRT----GILSDVFAYEQPITSLHFDLDKIVISNNEPTVKIYNRKDGNHWFCG 672
RSI +WD+ + + + + + + FD IV ++ + T+K++N F
Sbjct: 367 RSIAVWDMASPTDITLRRVLVGHRAAVNVVDFDDKYIVSASGDRTIKVWNTSTCE--FVR 424
Query: 673 EDDPEQGNVDFVRYKHGYLVEGRSNGDINTWAI 705
+ + + ++Y+ +V G S+ I W I
Sbjct: 425 TLNGHKRGIACLQYRDRLVVSGSSDNTIRLWDI 457
Score = 63.2 bits (152), Expect = 1e-09
Identities = 37/151 (24%), Positives = 67/151 (43%), Gaps = 8/151 (5%)
Query: 378 TLQQFYDSGSKITSLPKAHDEDITCLDFDMPFGTMCSAGSLDHSVKVWDLSKKKQIATLH 437
T++ + S + H I CL + + +GS D+++++WD+ + L
Sbjct: 411 TIKVWNTSTCEFVRTLNGHKRGIACLQYR---DRLVVSGSSDNTIRLWDIECGACLRVLE 467
Query: 438 GHLASISCMQIDQYSTLITGGRDAVLKLWDIDKAMADEASNSSEDNDACLYTFDSHVDEI 497
GH + C++ D +++G D +K+WD+ A+ A + CL T H +
Sbjct: 468 GHEELVRCIRFDN-KRIVSGAYDGKIKVWDLVAALDPRAPAGT----LCLRTLVEHSGRV 522
Query: 498 TAISFDGDNLVSGSQDRTVRQWDLNSGKCTQ 528
+ FD +VS S D T+ WD + Q
Sbjct: 523 FRLQFDEFQIVSSSHDDTILIWDFLNDPAAQ 553
>Hs16117783 [S] KOG0281 Beta-TrCP (transducin repeats containing)/Slimb
proteins
Length = 605
Score = 106 bits (265), Expect = 1e-22
Identities = 77/297 (25%), Positives = 137/297 (45%), Gaps = 55/297 (18%)
Query: 400 ITCLDFDMPFGTMCSAGSLDHSVKVWDLSKKKQIATLHGHLASISCMQIDQYSTLITGGR 459
+ CL +D +G D+++K+WD + + L GH S+ C+Q D+ +ITG
Sbjct: 306 VYCLQYD---DQKIVSGLRDNTIKIWDKNTLECKRILTGHTGSVLCLQYDE-RVIITGSS 361
Query: 460 DAVLKLWDIDKAMADEASNSSEDNDACLYTFDSHVDEITAISFDGDNLVSGSQDRTVRQW 519
D+ +++WD+ N+ E L T H + + + F+ +V+ S+DR++ W
Sbjct: 362 DSTVRVWDV---------NTGE----MLNTLIHHCEAVLHLRFNNGMMVTCSKDRSIAVW 408
Query: 520 DLNSGK-------------CTQTID-----ISFATGPMRSQRNIPLRNSVL------LTK 555
D+ S +D I A+G R I + N+ L
Sbjct: 409 DMASPTDITLRRVLVGHRAAVNVVDFDDKYIVSASG----DRTIKVWNTSTCEFVRTLNG 464
Query: 556 EPPAIGALQCFDAALATGTKDGIVRLWDLRSGKVVRMLEGHTDAITSLQFDSVNLVTGAM 615
I LQ D + +G+ D +RLWD+ G +R+LEGH + + ++FD+ +V+GA
Sbjct: 465 HKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDNKRIVSGAY 524
Query: 616 DRSIRIWDLRTGI----------LSDVFAYEQPITSLHFDLDKIVISNNEPTVKIYN 662
D I++WDL + L + + + L FD +IV S+++ T+ I++
Sbjct: 525 DGKIKVWDLVAALDPRAPAGTLCLRTLVEHSGRVFRLQFDEFQIVSSSHDDTILIWD 581
Score = 81.3 bits (199), Expect = 5e-15
Identities = 50/213 (23%), Positives = 101/213 (46%), Gaps = 29/213 (13%)
Query: 497 ITAISFDGDNLVSGSQDRTVRQWDLNSGKCTQTIDISFATGPMRSQRNIPLRNSVLLTKE 556
+ + +D +VSG +D T++ WD N+ +C + +LT
Sbjct: 306 VYCLQYDDQKIVSGLRDNTIKIWDKNTLECKR-----------------------ILTGH 342
Query: 557 PPAIGALQCFDAALATGTKDGIVRLWDLRSGKVVRMLEGHTDAITSLQFDSVNLVTGAMD 616
++ LQ + + TG+ D VR+WD+ +G+++ L H +A+ L+F++ +VT + D
Sbjct: 343 TGSVLCLQYDERVIITGSSDSTVRVWDVNTGEMLNTLIHHCEAVLHLRFNNGMMVTCSKD 402
Query: 617 RSIRIWDLRT----GILSDVFAYEQPITSLHFDLDKIVISNNEPTVKIYNRKDGNHWFCG 672
RSI +WD+ + + + + + + FD IV ++ + T+K++N F
Sbjct: 403 RSIAVWDMASPTDITLRRVLVGHRAAVNVVDFDDKYIVSASGDRTIKVWNTSTCE--FVR 460
Query: 673 EDDPEQGNVDFVRYKHGYLVEGRSNGDINTWAI 705
+ + + ++Y+ +V G S+ I W I
Sbjct: 461 TLNGHKRGIACLQYRDRLVVSGSSDNTIRLWDI 493
Score = 63.2 bits (152), Expect = 1e-09
Identities = 37/151 (24%), Positives = 67/151 (43%), Gaps = 8/151 (5%)
Query: 378 TLQQFYDSGSKITSLPKAHDEDITCLDFDMPFGTMCSAGSLDHSVKVWDLSKKKQIATLH 437
T++ + S + H I CL + + +GS D+++++WD+ + L
Sbjct: 447 TIKVWNTSTCEFVRTLNGHKRGIACLQYR---DRLVVSGSSDNTIRLWDIECGACLRVLE 503
Query: 438 GHLASISCMQIDQYSTLITGGRDAVLKLWDIDKAMADEASNSSEDNDACLYTFDSHVDEI 497
GH + C++ D +++G D +K+WD+ A+ A + CL T H +
Sbjct: 504 GHEELVRCIRFDN-KRIVSGAYDGKIKVWDLVAALDPRAPAGT----LCLRTLVEHSGRV 558
Query: 498 TAISFDGDNLVSGSQDRTVRQWDLNSGKCTQ 528
+ FD +VS S D T+ WD + Q
Sbjct: 559 FRLQFDEFQIVSSSHDDTILIWDFLNDPAAQ 589
>CE27762 [R] KOG0274 Cdc4 and related F-box and WD-40 proteins
Length = 585
Score = 106 bits (265), Expect = 1e-22
Identities = 69/247 (27%), Positives = 121/247 (48%), Gaps = 41/247 (16%)
Query: 386 GSKITSLPKAHDEDITCLDFDMPFGTMCSAGSLDHSVKVWDLSKKKQIATLHGHLASISC 445
GS + +L + H + C+ G++ GS D +++VWD+ + +ATLHGH A++ C
Sbjct: 326 GSLLHTL-QGHTSTVRCMAMA---GSILVTGSRDTTLRVWDVESGRHLATLHGHHAAVRC 381
Query: 446 MQIDQYSTLITGGRDAVLKLWDIDKAMADEASNSSEDNDACLYTFDSHVDEITAISFDGD 505
+Q D +T+++GG D +K+W + C+ T H + + ++ F+ +
Sbjct: 382 VQFDG-TTVVSGGYDFTVKIW-------------NAHTGRCIRTLTGHNNRVYSLLFESE 427
Query: 506 NLV--SGSQDRTVRQWDLNSGKCTQTIDISFATGPMRSQRNIPLRNSVLLTKEPPAIGAL 563
+ SGS D ++R WD + + ++ G + LR ++L++
Sbjct: 428 RSIVCSGSLDTSIRVWDFTRPEGQEC--VALLQGHTSLTSGMQLRGNILVS--------- 476
Query: 564 QCFDAALATGTKDGIVRLWDLRSGKVVRMLEGHTDAITSLQFDSVNLV-TGAMDRSIRIW 622
C D VR+WD+ G V ML GH AITSLQ+ N+V T + D ++++W
Sbjct: 477 -C--------NADSHVRVWDIHEGTCVHMLSGHRSAITSLQWFGRNMVATSSDDGTVKLW 527
Query: 623 DLRTGIL 629
D+ G L
Sbjct: 528 DIERGAL 534
Score = 95.5 bits (236), Expect = 2e-19
Identities = 71/277 (25%), Positives = 125/277 (44%), Gaps = 46/277 (16%)
Query: 397 DEDITCLDFDMPFGTMCSAGSLDHSVKVWDLSKKKQIATLHGHLASISCMQIDQYST-LI 455
D ITC+ + GS D+++KVW + K + + TL GH + QI Q ++
Sbjct: 254 DHVITCMQIH---DDVLVTGSDDNTLKVWCIDKGEVMYTLVGHTGGVWTSQISQCGRYIV 310
Query: 456 TGGRDAVLKLWDIDKAMADEASNSSEDNDACLYTFDSHVDEITAISFDGDNLVSGSQDRT 515
+G D +K+W S + + L+T H + ++ G LV+GS+D T
Sbjct: 311 SGSTDRTVKVW-------------STVDGSLLHTLQGHTSTVRCMAMAGSILVTGSRDTT 357
Query: 516 VRQWDLNSGKCTQTIDISFATGPMRSQRNIPLRNSVLLTKEPPAIGALQCFDAALATGTK 575
+R WD+ SG+ T+ A A+ +Q + +G
Sbjct: 358 LRVWDVESGRHLATLHGHHA-----------------------AVRCVQFDGTTVVSGGY 394
Query: 576 DGIVRLWDLRSGKVVRMLEGHTDAITSLQFDSVNLV--TGAMDRSIRIWDLRTGILSDVF 633
D V++W+ +G+ +R L GH + + SL F+S + +G++D SIR+WD +
Sbjct: 395 DFTVKIWNAHTGRCIRTLTGHNNRVYSLLFESERSIVCSGSLDTSIRVWDFTRPEGQECV 454
Query: 634 AYEQPITSLHFDL----DKIVISNNEPTVKIYNRKDG 666
A Q TSL + + +V N + V++++ +G
Sbjct: 455 ALLQGHTSLTSGMQLRGNILVSCNADSHVRVWDIHEG 491
Score = 92.8 bits (229), Expect = 2e-18
Identities = 68/237 (28%), Positives = 108/237 (44%), Gaps = 41/237 (17%)
Query: 419 DHSVKVWDLSKKKQIATLHGHLAS-ISCMQIDQYSTLITGGRDAVLKLWDIDKAMADEAS 477
D K W+ + A L GH I+CMQI L+TG D LK+W IDK
Sbjct: 232 DKIEKNWNANPIMGSAVLRGHEDHVITCMQIHD-DVLVTGSDDNTLKVWCIDKGEV---- 286
Query: 478 NSSEDNDACLYTFDSHVDEI--TAISFDGDNLVSGSQDRTVRQWDLNSGKCTQTIDISFA 535
+YT H + + IS G +VSGS DRTV+ W G T+
Sbjct: 287 ---------MYTLVGHTGGVWTSQISQCGRYIVSGSTDRTVKVWSTVDGSLLHTLQ---- 333
Query: 536 TGPMRSQRNIPLRNSVLLTKEPPAIGALQCFDAALATGTKDGIVRLWDLRSGKVVRMLEG 595
G + R + + S+L+T G++D +R+WD+ SG+ + L G
Sbjct: 334 -GHTSTVRCMAMAGSILVT------------------GSRDTTLRVWDVESGRHLATLHG 374
Query: 596 HTDAITSLQFDSVNLVTGAMDRSIRIWDLRTG-ILSDVFAYEQPITSLHFDLDKIVI 651
H A+ +QFD +V+G D +++IW+ TG + + + + SL F+ ++ ++
Sbjct: 375 HHAAVRCVQFDGTTVVSGGYDFTVKIWNAHTGRCIRTLTGHNNRVYSLLFESERSIV 431
>CE25007 [R] KOG0274 Cdc4 and related F-box and WD-40 proteins
Length = 587
Score = 106 bits (265), Expect = 1e-22
Identities = 69/247 (27%), Positives = 121/247 (48%), Gaps = 41/247 (16%)
Query: 386 GSKITSLPKAHDEDITCLDFDMPFGTMCSAGSLDHSVKVWDLSKKKQIATLHGHLASISC 445
GS + +L + H + C+ G++ GS D +++VWD+ + +ATLHGH A++ C
Sbjct: 328 GSLLHTL-QGHTSTVRCMAMA---GSILVTGSRDTTLRVWDVESGRHLATLHGHHAAVRC 383
Query: 446 MQIDQYSTLITGGRDAVLKLWDIDKAMADEASNSSEDNDACLYTFDSHVDEITAISFDGD 505
+Q D +T+++GG D +K+W + C+ T H + + ++ F+ +
Sbjct: 384 VQFDG-TTVVSGGYDFTVKIW-------------NAHTGRCIRTLTGHNNRVYSLLFESE 429
Query: 506 NLV--SGSQDRTVRQWDLNSGKCTQTIDISFATGPMRSQRNIPLRNSVLLTKEPPAIGAL 563
+ SGS D ++R WD + + ++ G + LR ++L++
Sbjct: 430 RSIVCSGSLDTSIRVWDFTRPEGQEC--VALLQGHTSLTSGMQLRGNILVS--------- 478
Query: 564 QCFDAALATGTKDGIVRLWDLRSGKVVRMLEGHTDAITSLQFDSVNLV-TGAMDRSIRIW 622
C D VR+WD+ G V ML GH AITSLQ+ N+V T + D ++++W
Sbjct: 479 -C--------NADSHVRVWDIHEGTCVHMLSGHRSAITSLQWFGRNMVATSSDDGTVKLW 529
Query: 623 DLRTGIL 629
D+ G L
Sbjct: 530 DIERGAL 536
Score = 95.5 bits (236), Expect = 2e-19
Identities = 71/277 (25%), Positives = 125/277 (44%), Gaps = 46/277 (16%)
Query: 397 DEDITCLDFDMPFGTMCSAGSLDHSVKVWDLSKKKQIATLHGHLASISCMQIDQYST-LI 455
D ITC+ + GS D+++KVW + K + + TL GH + QI Q ++
Sbjct: 256 DHVITCMQIH---DDVLVTGSDDNTLKVWCIDKGEVMYTLVGHTGGVWTSQISQCGRYIV 312
Query: 456 TGGRDAVLKLWDIDKAMADEASNSSEDNDACLYTFDSHVDEITAISFDGDNLVSGSQDRT 515
+G D +K+W S + + L+T H + ++ G LV+GS+D T
Sbjct: 313 SGSTDRTVKVW-------------STVDGSLLHTLQGHTSTVRCMAMAGSILVTGSRDTT 359
Query: 516 VRQWDLNSGKCTQTIDISFATGPMRSQRNIPLRNSVLLTKEPPAIGALQCFDAALATGTK 575
+R WD+ SG+ T+ A A+ +Q + +G
Sbjct: 360 LRVWDVESGRHLATLHGHHA-----------------------AVRCVQFDGTTVVSGGY 396
Query: 576 DGIVRLWDLRSGKVVRMLEGHTDAITSLQFDSVNLV--TGAMDRSIRIWDLRTGILSDVF 633
D V++W+ +G+ +R L GH + + SL F+S + +G++D SIR+WD +
Sbjct: 397 DFTVKIWNAHTGRCIRTLTGHNNRVYSLLFESERSIVCSGSLDTSIRVWDFTRPEGQECV 456
Query: 634 AYEQPITSLHFDL----DKIVISNNEPTVKIYNRKDG 666
A Q TSL + + +V N + V++++ +G
Sbjct: 457 ALLQGHTSLTSGMQLRGNILVSCNADSHVRVWDIHEG 493
Score = 92.8 bits (229), Expect = 2e-18
Identities = 68/237 (28%), Positives = 108/237 (44%), Gaps = 41/237 (17%)
Query: 419 DHSVKVWDLSKKKQIATLHGHLAS-ISCMQIDQYSTLITGGRDAVLKLWDIDKAMADEAS 477
D K W+ + A L GH I+CMQI L+TG D LK+W IDK
Sbjct: 234 DKIEKNWNANPIMGSAVLRGHEDHVITCMQIHD-DVLVTGSDDNTLKVWCIDKGEV---- 288
Query: 478 NSSEDNDACLYTFDSHVDEI--TAISFDGDNLVSGSQDRTVRQWDLNSGKCTQTIDISFA 535
+YT H + + IS G +VSGS DRTV+ W G T+
Sbjct: 289 ---------MYTLVGHTGGVWTSQISQCGRYIVSGSTDRTVKVWSTVDGSLLHTLQ---- 335
Query: 536 TGPMRSQRNIPLRNSVLLTKEPPAIGALQCFDAALATGTKDGIVRLWDLRSGKVVRMLEG 595
G + R + + S+L+T G++D +R+WD+ SG+ + L G
Sbjct: 336 -GHTSTVRCMAMAGSILVT------------------GSRDTTLRVWDVESGRHLATLHG 376
Query: 596 HTDAITSLQFDSVNLVTGAMDRSIRIWDLRTG-ILSDVFAYEQPITSLHFDLDKIVI 651
H A+ +QFD +V+G D +++IW+ TG + + + + SL F+ ++ ++
Sbjct: 377 HHAAVRCVQFDGTTVVSGGYDFTVKIWNAHTGRCIRTLTGHNNRVYSLLFESERSIV 433
>CE28600 [S] KOG0281 Beta-TrCP (transducin repeats containing)/Slimb
proteins
Length = 665
Score = 105 bits (262), Expect = 2e-22
Identities = 74/300 (24%), Positives = 134/300 (44%), Gaps = 47/300 (15%)
Query: 396 HDEDITCLDFDMPFGTMCSAGSLDHSVKVWDLSKKKQIATLHGHLASISCMQIDQYSTLI 455
+ + + CL +D +G D+++K+WD L GH S+ C+Q D +I
Sbjct: 221 NSKGVYCLQYD---DDKIVSGLRDNTIKIWDRKDYSCSRILSGHTGSVLCLQYDN-RVII 276
Query: 456 TGGRDAVLKLWDIDKAMADEASNSSEDNDACLYTFDSHVDEITAISFDGDNLVSGSQDRT 515
+G DA +++WD+ + C+ T H + + + F +V+ S+DR+
Sbjct: 277 SGSSDATVRVWDV-------------ETGECIKTLIHHCEAVLHLRFANGIMVTCSKDRS 323
Query: 516 VRQWDLNSGK-------------CTQTID-----ISFATG--PMRSQRNIPLRNSVLLTK 555
+ WD+ S + +D I A+G ++ L L
Sbjct: 324 IAVWDMVSPRDITIRRVLVGHRAAVNVVDFDDRYIVSASGDRTIKVWSMDTLEFVRTLAG 383
Query: 556 EPPAIGALQCFDAALATGTKDGIVRLWDLRSGKVVRMLEGHTDAITSLQFDSVNLVTGAM 615
I LQ + +G+ D +RLWD+ SG +R+LEGH + + ++FD +V+GA
Sbjct: 384 HRRGIACLQYRGRLVVSGSSDNTIRLWDIHSGVCLRVLEGHEELVRCIRFDEKRIVSGAY 443
Query: 616 DRSIRIWDLRTGI----------LSDVFAYEQPITSLHFDLDKIVISNNEPTVKIYNRKD 665
D I++WDL+ + L + + + L FD +IV S+++ T+ I++ D
Sbjct: 444 DGKIKVWDLQAALDPRALSSEICLCSLVQHTGRVFRLQFDDFQIVSSSHDDTILIWDFLD 503
Score = 72.8 bits (177), Expect = 2e-12
Identities = 48/213 (22%), Positives = 98/213 (45%), Gaps = 29/213 (13%)
Query: 497 ITAISFDGDNLVSGSQDRTVRQWDLNSGKCTQTIDISFATGPMRSQRNIPLRNSVLLTKE 556
+ + +D D +VSG +D T++ WD C++ +L+
Sbjct: 225 VYCLQYDDDKIVSGLRDNTIKIWDRKDYSCSR-----------------------ILSGH 261
Query: 557 PPAIGALQCFDAALATGTKDGIVRLWDLRSGKVVRMLEGHTDAITSLQFDSVNLVTGAMD 616
++ LQ + + +G+ D VR+WD+ +G+ ++ L H +A+ L+F + +VT + D
Sbjct: 262 TGSVLCLQYDNRVIISGSSDATVRVWDVETGECIKTLIHHCEAVLHLRFANGIMVTCSKD 321
Query: 617 RSIRIWDLRT----GILSDVFAYEQPITSLHFDLDKIVISNNEPTVKIYNRKDGNHWFCG 672
RSI +WD+ + I + + + + FD IV ++ + T+K+++ F
Sbjct: 322 RSIAVWDMVSPRDITIRRVLVGHRAAVNVVDFDDRYIVSASGDRTIKVWSMDTLE--FVR 379
Query: 673 EDDPEQGNVDFVRYKHGYLVEGRSNGDINTWAI 705
+ + ++Y+ +V G S+ I W I
Sbjct: 380 TLAGHRRGIACLQYRGRLVVSGSSDNTIRLWDI 412
>SPBC2G2.18 [R] KOG0274 Cdc4 and related F-box and WD-40 proteins
Length = 775
Score = 97.4 bits (241), Expect = 6e-20
Identities = 81/322 (25%), Positives = 144/322 (44%), Gaps = 67/322 (20%)
Query: 385 SGSKITSLPKAHDEDITCLDFDMPFGTMCSAGSLDHSVKVWDLSKKKQIATLHGHLASIS 444
+G I SL + H+ D+ ++ G GS D +V+VWDL + +GH ++I
Sbjct: 435 TGVLIRSLEE-HEGDVWTFEY---VGDTLVTGSTDRTVRVWDLRTGECKQVFYGHTSTIR 490
Query: 445 CMQIDQYST-------------------------LITGGRDAVLKLWDI----DKAMADE 475
C++I Q + +I+ RD ++LW + D +
Sbjct: 491 CIKIVQGNQSTTDTDDVEKENRPASNDANSMPPYIISSSRDCTIRLWSLPCLDDPPFVNV 550
Query: 476 ASNSSEDNDAC--------LYTFDSHVDEITAISFDGDNLVSGSQDRTVRQWDLNSGKCT 527
N ++ND + T H D + ++ GD +VS S D T+R W ++G C
Sbjct: 551 NENPDQNNDFTSATTNPFYIRTLRGHTDSVREVACLGDLIVSASYDGTLRVWKASTGVCL 610
Query: 528 QTIDISFATGPMRSQRNIPLRNSVLLTKEPPAIGALQCFDAALATGTKDGIVRLWDLRSG 587
+ G + S P R QC A GT D +R+W+L SG
Sbjct: 611 HV--LRGHVGRVYSVTINPSRQ--------------QCISA----GT-DAKIRIWNLESG 649
Query: 588 KVVRMLEGHTDAITSLQFDSVNLVTGAM--DRSIRIWDLRTGILSDVFAYEQPITSLHFD 645
++++ L GH++ ++ + F+ LV+ + D S+R+WDL TG D+ + P+ + F
Sbjct: 650 ELLQTLHGHSNLVSQVTFNQNILVSASAPPDTSLRVWDLNTGSCRDIL--KCPLGHIFFQ 707
Query: 646 LDKI-VISNNEPTVKIYNRKDG 666
D+ V+S + T+++++ + G
Sbjct: 708 HDESKVVSGSHSTLQLWDIRSG 729
Score = 55.5 bits (132), Expect = 3e-07
Identities = 29/90 (32%), Positives = 48/90 (53%), Gaps = 7/90 (7%)
Query: 544 NIPLRNSVLLTKEPPAIGALQCFDAALATGTKDGIVRLWDLRSGKVVRMLEGHTDAITSL 603
+ P+ L+TK LQ D + T + ++D ++G ++R LE H + +
Sbjct: 400 SFPIHGVRLITK-------LQFDDDKIIVSTCSPRINIYDTKTGVLIRSLEEHEGDVWTF 452
Query: 604 QFDSVNLVTGAMDRSIRIWDLRTGILSDVF 633
++ LVTG+ DR++R+WDLRTG VF
Sbjct: 453 EYVGDTLVTGSTDRTVRVWDLRTGECKQVF 482
>Hs22059543 [Z] KOG0244 Kinesin-like protein
Length = 911
Score = 95.5 bits (236), Expect = 2e-19
Identities = 66/242 (27%), Positives = 117/242 (48%), Gaps = 37/242 (15%)
Query: 408 PFGTMCSAGSLDHSVKVWDLSKKKQIATLHGHLASISCMQIDQYST----LITGGRDAVL 463
P GT A S ++V++WDL + + L GHL + C+ +DQ S+ +ITG +D +
Sbjct: 698 PTGTFLYAAS-GNAVRMWDLKRFQSTGKLTGHLGPVMCLTVDQISSGQDLIITGSKDHYI 756
Query: 464 KLWDIDKAMADEASNSSEDNDACLYTFDS-HVDEITAISFDGDNLVSGSQDRTVRQWDLN 522
K++D+ + S + + F+ H D I A++ GDNL SGS+D +++WDL
Sbjct: 757 KMFDVTEGALGTVSPT--------HNFEPPHYDGIEALTIQGDNLFSGSRDNGIKKWDLT 808
Query: 523 SGKCTQTIDISFATGPMRSQRNIPLRNSVLLTKEPPAIGALQCFDAALATGTKDGIVRLW 582
Q + + A+G + L +G + GI+++W
Sbjct: 809 QKDLLQQVPNAHKDWVC-------------------ALGVVP-DHPVLLSGCRGGILKVW 848
Query: 583 DLRSGKVVRMLEGHTDAITSLQFDSVNLVTGAMDRSIRIW---DLRTGILSDVFAYEQPI 639
++ + V ++GH I ++ +S ++ T A DR++RIW +L+ G +SD + I
Sbjct: 849 NMDTFMPVGEMKGHDSPINAICVNSTHIFTAADDRTVRIWKARNLQDGQISDTGDLGEDI 908
Query: 640 TS 641
S
Sbjct: 909 AS 910
Score = 67.0 bits (162), Expect = 9e-11
Identities = 67/309 (21%), Positives = 132/309 (42%), Gaps = 42/309 (13%)
Query: 335 SIYQQLQDHEKKSDISERKKHSTSKKIKDVGVSHRNRRRKTYPTLQQFYDSGSKITSLPK 394
+++ +L + + + + K + + +V S R +P + + + +
Sbjct: 522 NVFNRLTVSQGNTSVQQDKSDESDSSLSEVHRSSRRGIINPFPASKGIRAFPLQCIHIAE 581
Query: 395 AHDEDITCLDFDMPFGTMCSAGSLDHSVKVWDLSKKKQIATLHGHLASISCMQIDQYSTL 454
H + + C+D + GS D + KVW+L ++I +L GH ++ ++ Y++L
Sbjct: 582 GHTKAVLCVDST---DDLLFTGSKDRTCKVWNLVTGQEIMSLGGHPNNVVSVKYCNYTSL 638
Query: 455 ITGGRDAVLKLWDI-DKAMADEASNSSED---NDAC---------LYTFDSHVDEITAIS 501
+ + +K+WDI D A SS DAC + + ++ +++I A++
Sbjct: 639 VFTVSTSYIKVWDIRDSAKCIRTLTSSGQVTLGDACSASTSRTVAIPSGENQINQI-ALN 697
Query: 502 FDGDNLVSGSQDRTVRQWDLNSGKCTQTIDISFATGPMRSQRNIPLRNSVLLTKEPPAIG 561
G L + S VR WDL + T ++ GP+ + LT + + G
Sbjct: 698 PTGTFLYAAS-GNAVRMWDLK--RFQSTGKLTGHLGPV-----------MCLTVDQISSG 743
Query: 562 ALQCFDAALATGTKDGIVRLWDLRSGKVVRMLEGHT------DAITSLQFDSVNLVTGAM 615
+ TG+KD ++++D+ G + + H D I +L NL +G+
Sbjct: 744 -----QDLIITGSKDHYIKMFDVTEGALGTVSPTHNFEPPHYDGIEALTIQGDNLFSGSR 798
Query: 616 DRSIRIWDL 624
D I+ WDL
Sbjct: 799 DNGIKKWDL 807
>At5g50230 [R] KOG0288 WD40 repeat protein TipD
Length = 515
Score = 94.0 bits (232), Expect = 7e-19
Identities = 79/320 (24%), Positives = 144/320 (44%), Gaps = 51/320 (15%)
Query: 321 LENKEEEHSPLLSKSIYQQLQDHEKKSDISERKKHSTSKKIKDVGVSHRNRR------RK 374
++ E E+ L+ + + Q++QD E+ ++ ++ + +K +K G+ R+ R+
Sbjct: 148 VQKAETENKMLIDRWMLQKMQDAERLNEANDLYEEMLAK-LKANGLETLARQQVDGIVRR 206
Query: 375 TYPTLQQFYDSGSKITSLPKAHDEDITC--LDFDMPFGTMCSAGSLDHSVKVWDLSKKKQ 432
F +S T + H + C + F+ GT+ + G D +VK+WD +
Sbjct: 207 NEDGTDHFVESTIPSTCANRIHAHEGGCGSIVFEYNSGTLFTGGQ-DRAVKMWDTNSGTL 265
Query: 433 IATLHGHLASISCMQIDQYS-TLITGGRDAVLKLWDIDKAMADEASNSSEDNDACLYTFD 491
I +L+G L +I M + + ++I L +WD+ +T
Sbjct: 266 IKSLYGSLGNILDMAVTHDNKSVIAATSSNNLFVWDVSSGRVR-------------HTLT 312
Query: 492 SHVDEITAIS---FDGDNLVSGSQDRTVRQWDLNSGKCTQTIDISFATGPMRSQRNIPLR 548
H D++ A+ F ++VS + DRT++ WDL+ G CT
Sbjct: 313 GHTDKVCAVDVSKFSSRHVVSAAYDRTIKLWDLHKGYCT--------------------- 351
Query: 549 NSVLLTKEPPAIGALQCFDAALATGTKDGIVRLWDLRSGKVVRMLEGHTDAIT--SLQFD 606
N+VL T AI L + +G DG +RLWD+++GK++ + GH+ A+T SL +
Sbjct: 352 NTVLFTSNCNAI-CLSIDGLTVFSGHMDGNLRLWDIQTGKLLSEVAGHSSAVTSVSLSRN 410
Query: 607 SVNLVTGAMDRSIRIWDLRT 626
++T D ++D RT
Sbjct: 411 GNRILTSGRDNVHNVFDTRT 430
Score = 65.5 bits (158), Expect = 3e-10
Identities = 56/280 (20%), Positives = 118/280 (42%), Gaps = 42/280 (15%)
Query: 436 LHGHLASISCMQIDQYS-TLITGGRDAVLKLWDIDKAMADEASNSSEDNDACLYTFDSHV 494
+H H + + S TL TGG+D +K+WD + ++ S N +
Sbjct: 227 IHAHEGGCGSIVFEYNSGTLFTGGQDRAVKMWDTNSGTLIKSLYGSLGNILDM------- 279
Query: 495 DEITAISFDGDNLVSGSQDRTVRQWDLNSGKCTQTIDISFATGPMRSQRNIPLRNSVLLT 554
A++ D ++++ + + WD++SG+ T+ TG T
Sbjct: 280 ----AVTHDNKSVIAATSSNNLFVWDVSSGRVRHTL-----TGH---------------T 315
Query: 555 KEPPAIGALQCFDAALATGTKDGIVRLWDLRSGKVVR--MLEGHTDAITSLQFDSVNLVT 612
+ A+ + + + D ++LWDL G + + +AI L D + + +
Sbjct: 316 DKVCAVDVSKFSSRHVVSAAYDRTIKLWDLHKGYCTNTVLFTSNCNAIC-LSIDGLTVFS 374
Query: 613 GAMDRSIRIWDLRTG-ILSDVFAYEQPITSLHFDL--DKIVISNNEPTVKIYNRKD---- 665
G MD ++R+WD++TG +LS+V + +TS+ ++I+ S + +++ +
Sbjct: 375 GHMDGNLRLWDIQTGKLLSEVAGHSSAVTSVSLSRNGNRILTSGRDNVHNVFDTRTLEIC 434
Query: 666 GNHWFCGEDDPEQGNVDFVRYKHGYLVEGRSNGDINTWAI 705
G G + + Y+ G ++G ++ W++
Sbjct: 435 GTLRASGNRLASNWSRSCISPDDDYVAAGSADGSVHVWSL 474
>At3g49660 [R] KOG0266 WD40 repeat-containing protein
Length = 317
Score = 92.0 bits (227), Expect = 3e-18
Identities = 70/258 (27%), Positives = 118/258 (45%), Gaps = 46/258 (17%)
Query: 396 HDEDITCLDFDMPFGTMCSAGSLDHSVKVWDLSKKKQIATLHGHLASISCMQIDQYSTLI 455
H+ I+ + F + SA D ++K+WD+ I TL GH C+ + S +I
Sbjct: 70 HENGISDVAFSSDARFIVSASD-DKTLKLWDVETGSLIKTLIGHTNYAFCVNFNPQSNMI 128
Query: 456 TGGR-DAVLKLWDIDKAMADEASNSSEDNDACLYTFDSHVDEITAISF--DGDNLVSGSQ 512
G D +++WD+ CL +H D +TA+ F DG +VS S
Sbjct: 129 VSGSFDETVRIWDVTTGK-------------CLKVLPAHSDPVTAVDFNRDGSLIVSSSY 175
Query: 513 DRTVRQWDLNSGKCTQTIDISFATGPMRSQRNIP---------LRNSVLLTKEPPA---- 559
D R WD +G C +T+ I P+ R P L N++ L A
Sbjct: 176 DGLCRIWDSGTGHCVKTL-IDDENPPVSFVRFSPNGKFILVGTLDNTLRLWNISSAKFLK 234
Query: 560 -----IGALQCFDAA--------LATGTKDGIVRLWDLRSGKVVRMLEGHTDAITSLQ-F 605
+ A C +A + +G++D V +W+L S K+++ LEGHT+ + ++
Sbjct: 235 TYTGHVNAQYCISSAFSVTNGKRIVSGSEDNCVHMWELNSKKLLQKLEGHTETVMNVACH 294
Query: 606 DSVNLV-TGAMDRSIRIW 622
+ NL+ +G++D+++RIW
Sbjct: 295 PTENLIASGSLDKTVRIW 312
>At5g23430 [D] KOG0267 Microtubule severing protein katanin p80 subunit B
(contains WD40 repeats)
Length = 922
Score = 88.6 bits (218), Expect = 3e-17
Identities = 71/275 (25%), Positives = 114/275 (40%), Gaps = 41/275 (14%)
Query: 395 AHDEDITCLDFDMPFGTMCSAGSLDHSVKVWDLSKKKQIATLHGHLASISCMQIDQYSTL 454
AH + CL + G DH V +W + K I +L+GH + I + D L
Sbjct: 14 AHSAAVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLYGHSSGIDSVTFDASEVL 73
Query: 455 ITGGR-DAVLKLWDIDKAMADEASNSSEDNDACLYTFDSHVDEITAISFD--GDNLVSGS 511
+ G +KLWD+++A + T H ++ F G+ SGS
Sbjct: 74 VAAGAASGTIKLWDLEEAKI-------------VRTLTGHRSNCISVDFHPFGEFFASGS 120
Query: 512 QDRTVRQWDLNSGKCTQTIDISFATGPMRSQRNIPLRNSVLLTKEPPAIGALQCFDAALA 571
D ++ WD+ C T G R N + T + +
Sbjct: 121 LDTNLKIWDIRKKGCIHTYK-----GHTRGV------NVLRFTPDGRWV----------V 159
Query: 572 TGTKDGIVRLWDLRSGKVVRMLEGHTDAITSLQFDSVN--LVTGAMDRSIRIWDLRTGIL 629
+G +D IV++WDL +GK++ + H I SL F L TG+ DR+++ WDL T L
Sbjct: 160 SGGEDNIVKVWDLTAGKLLTEFKSHEGQIQSLDFHPHEFLLATGSADRTVKFWDLETFEL 219
Query: 630 SDVFAYEQP-ITSLHFDLD-KIVISNNEPTVKIYN 662
E + L F+ D K V+ + ++KI++
Sbjct: 220 IGSGGPETAGVRCLSFNPDGKTVLCGLQESLKIFS 254
Score = 53.1 bits (126), Expect = 1e-06
Identities = 34/109 (31%), Positives = 56/109 (51%), Gaps = 8/109 (7%)
Query: 566 FDAA---LATGTKDGIVRLWDLRSGKVVRMLEGHTDAITSLQFDSVN--LVTGAMDRSIR 620
FDA+ +A G G ++LWDL K+VR L GH S+ F +G++D +++
Sbjct: 67 FDASEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLK 126
Query: 621 IWDLR-TGILSDVFAYEQPITSLHFDLD-KIVISNNEPT-VKIYNRKDG 666
IWD+R G + + + + L F D + V+S E VK+++ G
Sbjct: 127 IWDIRKKGCIHTYKGHTRGVNVLRFTPDGRWVVSGGEDNIVKVWDLTAG 175
>Hs21071067 [K] KOG0263 Transcription initiation factor TFIID subunit TAF5
(also component of histone acetyltransferase SAGA)
Length = 800
Score = 88.2 bits (217), Expect = 4e-17
Identities = 65/214 (30%), Positives = 98/214 (45%), Gaps = 39/214 (18%)
Query: 415 AGSLDHSVKVWDLSKKKQIATLHGHLASISCMQIDQYST-LITGGRDAVLKLWDIDKAMA 473
+ S D +V++W L + GH + Q Y ++GG D V +LW
Sbjct: 560 SSSEDGTVRLWSLQTFTCLVGYKGHNYPVWDTQFSPYGYYFVSGGHDRVARLW------- 612
Query: 474 DEASNSSEDNDACLYTFDSHVDEITAISF--DGDNLVSGSQDRTVRQWDLNSGKCTQTID 531
+ D+ L F H+ ++ F + + + +GS DRTVR WD+ +G C +
Sbjct: 613 ------ATDHYQPLRIFAGHLADVNCTRFHPNSNYVATGSADRTVRLWDVLNGNCVRIF- 665
Query: 532 ISFATGPMRSQRNIPLRNSVLLTKEPPAIGALQCFDAALATGTKDGIVRLWDLRSGKVVR 591
+ GP+ S LT P LATG DG V LWD+ G +V
Sbjct: 666 -TGHKGPIHS-----------LTFSPNG--------RFLATGATDGRVLLWDIGHGLMVG 705
Query: 592 MLEGHTDAITSLQF--DSVNLVTGAMDRSIRIWD 623
L+GHTD + SL+F D L +G+MD ++R+WD
Sbjct: 706 ELKGHTDTVCSLRFSRDGEILASGSMDNTVRLWD 739
Score = 60.5 bits (145), Expect = 9e-09
Identities = 65/267 (24%), Positives = 111/267 (41%), Gaps = 47/267 (17%)
Query: 443 ISCMQIDQYSTLITGG-RDAVLKLWDI------------DKAMADEASNS------SEDN 483
++ + + S+LI GG D+ +++W + D ++ D+ S+ E
Sbjct: 473 LTAVDVTDDSSLIAGGFADSTVRVWSVTPKKLRSVKQASDLSLIDKESDDVLERIMDEKT 532
Query: 484 DACLYTFDSHVDEITAISFDGDN--LVSGSQDRTVRQWDLNSGKCT--------QTIDIS 533
+ L H + SF D L+S S+D TVR W L + C D
Sbjct: 533 ASELKILYGHSGPVYGASFSPDRNYLLSSSEDGTVRLWSLQTFTCLVGYKGHNYPVWDTQ 592
Query: 534 FAT--------GPMRSQRNIPLRNSVLLTKEPPAIGALQCF-----DAALATGTKDGIVR 580
F+ G R R + L + + C +ATG+ D VR
Sbjct: 593 FSPYGYYFVSGGHDRVARLWATDHYQPLRIFAGHLADVNCTRFHPNSNYVATGSADRTVR 652
Query: 581 LWDLRSGKVVRMLEGHTDAITSLQFDSVN--LVTGAMDRSIRIWDLRTGIL-SDVFAYEQ 637
LWD+ +G VR+ GH I SL F L TGA D + +WD+ G++ ++ +
Sbjct: 653 LWDVLNGNCVRIFTGHKGPIHSLTFSPNGRFLATGATDGRVLLWDIGHGLMVGELKGHTD 712
Query: 638 PITSLHFDLDKIVISNN--EPTVKIYN 662
+ SL F D ++++ + TV++++
Sbjct: 713 TVCSLRFSRDGEILASGSMDNTVRLWD 739
Score = 57.4 bits (137), Expect = 7e-08
Identities = 57/262 (21%), Positives = 98/262 (36%), Gaps = 53/262 (20%)
Query: 394 KAHDEDITCLDFDMPFGTMCSAGSLDHSVKVWDLSKKKQIATLHGHLASISCMQIDQYST 453
K H+ + F P+G +G D ++W + + GHLA ++C + S
Sbjct: 582 KGHNYPVWDTQFS-PYGYYFVSGGHDRVARLWATDHYQPLRIFAGHLADVNCTRFHPNSN 640
Query: 454 LI-TGGRDAVLKLWDIDKAMADEASNSSEDNDACLYTFDSHVDEITAISF--DGDNLVSG 510
+ TG D ++LWD+ N C+ F H I +++F +G L +G
Sbjct: 641 YVATGSADRTVRLWDV-------------LNGNCVRIFTGHKGPIHSLTFSPNGRFLATG 687
Query: 511 SQDRTVRQWDLNSGKCTQTIDISFATGPMRSQRNIPLRNSVLLTKEPPAIGALQCFDAAL 570
+ D V WD+ G G ++ + S+ +++ L
Sbjct: 688 ATDGRVLLWDIGHG---------LMVGELKGHTDTVC--SLRFSRD----------GEIL 726
Query: 571 ATGTKDGIVRLWDLRSGKVVRMLEGHTDAITSLQFDSVNLVTGAMDRSIRIWDLRTGILS 630
A+G+ D VRLWD A L+ D TG ++ +L +L
Sbjct: 727 ASGSMDNTVRLWDA------------IKAFEDLETDDFTTATGHINLPENSQEL---LLG 771
Query: 631 DVFAYEQPITSLHFDLDKIVIS 652
P+ LHF +V++
Sbjct: 772 TYMTKSTPVVHLHFTRRNLVLA 793
>7302979 [S] KOG0295 WD40 repeat-containing protein
Length = 411
Score = 87.8 bits (216), Expect = 5e-17
Identities = 82/315 (26%), Positives = 137/315 (43%), Gaps = 62/315 (19%)
Query: 396 HDEDITCLDFDMPFGTMCSAGSLDHSVKVWDLSKKKQIATLHGHLASISCMQIDQYSTLI 455
H IT + F F M SA S D ++++WD + +L GH S+ + D L+
Sbjct: 107 HRASITRVIFHPIFALMVSA-SEDATIRIWDFETGEYERSLKGHTDSVQDVAFDAQGKLL 165
Query: 456 TG-GRDAVLKLWDIDKAMADEASNSSEDNDACLYTFDSHVDEITAISF--DGDNLVSGSQ 512
D +KLWD ++ C+ T H +++++F GD ++S S+
Sbjct: 166 ASCSADLSIKLWDFQQSYE------------CIKTMHGHDHNVSSVAFVPAGDYVLSASR 213
Query: 513 DRTVRQWDLNSGKCTQT------------IDIS---FATGPMRSQRNIPLRNS------- 550
DRT++ W++ +G C +T + I FAT + L NS
Sbjct: 214 DRTIKMWEVATGYCVKTYTGHREWVRMVRVHIEGSIFATCSNDQTIRVWLTNSKDCKVEL 273
Query: 551 ------VLLTKEPPAIGALQCFDAA-------------LATGTKDGIVRLWDLRSGKVVR 591
V P A +AA LA+G++D +R+WD+ G +
Sbjct: 274 RDHEHTVECIAWAPEAAASAINEAAGADNKKGHHQGPFLASGSRDKTIRIWDVSVGLCLL 333
Query: 592 MLEGHTDAITSLQF--DSVNLVTGAMDRSIRIWDLRT-GILSDVFAYEQPITSLHF-DLD 647
L GH + + L F LV+ + D++IR+WDLR + ++A++ TS+ F
Sbjct: 334 TLSGHDNWVRGLAFHPGGKYLVSASDDKTIRVWDLRNKRCMKTLYAHQHFCTSIDFHKAH 393
Query: 648 KIVISNN-EPTVKIY 661
VIS + + TVK++
Sbjct: 394 PYVISGSVDQTVKVW 408
Score = 52.0 bits (123), Expect = 3e-06
Identities = 26/105 (24%), Positives = 59/105 (55%), Gaps = 6/105 (5%)
Query: 568 AALATGTKDGIVRLWDLRSGKVVRMLEGHTDAITSLQFDSVN--LVTGAMDRSIRIWDLR 625
A + + ++D +R+WD +G+ R L+GHTD++ + FD+ L + + D SI++WD +
Sbjct: 121 ALMVSASEDATIRIWDFETGEYERSLKGHTDSVQDVAFDAQGKLLASCSADLSIKLWDFQ 180
Query: 626 TG--ILSDVFAYEQPITSLHF--DLDKIVISNNEPTVKIYNRKDG 666
+ + ++ ++S+ F D ++ ++ + T+K++ G
Sbjct: 181 QSYECIKTMHGHDHNVSSVAFVPAGDYVLSASRDRTIKMWEVATG 225
>At5g08390 [D] KOG0267 Microtubule severing protein katanin p80 subunit B
(contains WD40 repeats)
Length = 823
Score = 87.4 bits (215), Expect = 7e-17
Identities = 61/237 (25%), Positives = 98/237 (40%), Gaps = 39/237 (16%)
Query: 395 AHDEDITCLDFDMPFGTMCSAGSLDHSVKVWDLSKKKQIATLHGHLASISCMQIDQYSTL 454
AH + CL + G DH V +W + K I +L+GH + I + D L
Sbjct: 107 AHSAAVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLYGHSSGIDSVTFDASEGL 166
Query: 455 I-TGGRDAVLKLWDIDKAMADEASNSSEDNDACLYTFDSHVDEITAISFD--GDNLVSGS 511
+ G +KLWD+++A + T H +++F G+ SGS
Sbjct: 167 VAAGAASGTIKLWDLEEAKV-------------VRTLTGHRSNCVSVNFHPFGEFFASGS 213
Query: 512 QDRTVRQWDLNSGKCTQTIDISFATGPMRSQRNIPLRNSVLLTKEPPAIGALQCFDAALA 571
D ++ WD+ C T G R N + T + I
Sbjct: 214 LDTNLKIWDIRKKGCIHTY-----KGHTRGV------NVLRFTPDGRWI----------V 252
Query: 572 TGTKDGIVRLWDLRSGKVVRMLEGHTDAITSLQF--DSVNLVTGAMDRSIRIWDLRT 626
+G +D +V++WDL +GK++ + H I SL F L TG+ D++++ WDL T
Sbjct: 253 SGGEDNVVKVWDLTAGKLLHEFKSHEGKIQSLDFHPHEFLLATGSADKTVKFWDLET 309
Score = 74.7 bits (182), Expect = 4e-13
Identities = 55/214 (25%), Positives = 90/214 (41%), Gaps = 38/214 (17%)
Query: 396 HDEDITCLDFDMPFGTMCSAGSLDHSVKVWDLSKKKQIATLHGHLASISCMQIDQYSTLI 455
H I + FD G + +AG+ ++K+WDL + K + TL GH ++ + +
Sbjct: 151 HSSGIDSVTFDASEG-LVAAGAASGTIKLWDLEEAKVVRTLTGHRSNCVSVNFHPFGEFF 209
Query: 456 TGGR-DAVLKLWDIDKAMADEASNSSEDNDACLYTFDSHVDEITAISF--DGDNLVSGSQ 512
G D LK+WDI K C++T+ H + + F DG +VSG +
Sbjct: 210 ASGSLDTNLKIWDIRKK-------------GCIHTYKGHTRGVNVLRFTPDGRWIVSGGE 256
Query: 513 DRTVRQWDLNSGKCTQTIDISFATGPMRSQRNIPLRNSVLLTKEPPAIGALQCFDAALAT 572
D V+ WDL +GK + G ++S P + LAT
Sbjct: 257 DNVVKVWDLTAGKLLH--EFKSHEGKIQSLDFHP-------------------HEFLLAT 295
Query: 573 GTKDGIVRLWDLRSGKVVRMLEGHTDAITSLQFD 606
G+ D V+ WDL + +++ T + L F+
Sbjct: 296 GSADKTVKFWDLETFELIGSGGTETTGVRCLTFN 329
Score = 69.3 bits (168), Expect = 2e-11
Identities = 41/140 (29%), Positives = 70/140 (49%), Gaps = 17/140 (12%)
Query: 387 SKITSLPKAHDEDITCLDFDMPFGTMCSAGSLDHSVKVWDLSKKKQIATLHGHLASISCM 446
+K+ H + ++F PFG ++GSLD ++K+WD+ KK I T GH ++ +
Sbjct: 184 AKVVRTLTGHRSNCVSVNFH-PFGEFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNVL 242
Query: 447 QIDQYST-LITGGRDAVLKLWDIDKAMADEASNSSEDNDACLYTFDSHVDEITAISFDGD 505
+ +++GG D V+K+WD+ L+ F SH +I ++ F
Sbjct: 243 RFTPDGRWIVSGGEDNVVKVWDLTAG-------------KLLHEFKSHEGKIQSLDFHPH 289
Query: 506 N--LVSGSQDRTVRQWDLNS 523
L +GS D+TV+ WDL +
Sbjct: 290 EFLLATGSADKTVKFWDLET 309
Score = 55.8 bits (133), Expect = 2e-07
Identities = 43/149 (28%), Positives = 72/149 (47%), Gaps = 14/149 (9%)
Query: 566 FDAA---LATGTKDGIVRLWDLRSGKVVRMLEGHTDAITSLQFDSVN--LVTGAMDRSIR 620
FDA+ +A G G ++LWDL KVVR L GH S+ F +G++D +++
Sbjct: 160 FDASEGLVAAGAASGTIKLWDLEEAKVVRTLTGHRSNCVSVNFHPFGEFFASGSLDTNLK 219
Query: 621 IWDLR-TGILSDVFAYEQPITSLHFDLDK--IVISNNEPTVKIYNRKDGN--HWFCGEDD 675
IWD+R G + + + + L F D IV + VK+++ G H F +
Sbjct: 220 IWDIRKKGCIHTYKGHTRGVNVLRFTPDGRWIVSGGEDNVVKVWDLTAGKLLHEFKSHEG 279
Query: 676 PEQGNVDFVRYKHGYLV-EGRSNGDINTW 703
Q ++DF + H +L+ G ++ + W
Sbjct: 280 KIQ-SLDF--HPHEFLLATGSADKTVKFW 305
>SPAC18B11.10 [R] KOG0266 WD40 repeat-containing protein
Length = 614
Score = 87.0 bits (214), Expect = 9e-17
Identities = 67/243 (27%), Positives = 115/243 (46%), Gaps = 53/243 (21%)
Query: 396 HDEDITCLDFDMPFGTMCSAGSLDHSVKVWDLSKKKQIATLHG---------HLASISCM 446
H + C+ F G + G + + V+D+ K++ TLH ++ +I+
Sbjct: 312 HPSVVCCVKFSNN-GKYLATGC-NQAANVFDVQTGKKLFTLHEESPDPSRDLYVRTIAFS 369
Query: 447 QIDQYSTLITGGRDAVLKLWDIDKAMADEASNSSEDNDACLYTFDSHVDEITAISF--DG 504
+Y L+TG D +KLWD+ Y F H +I ++ F +G
Sbjct: 370 PDGKY--LVTGTEDRQIKLWDLS-------------TQKVRYVFSGHEQDIYSLDFSHNG 414
Query: 505 DNLVSGSQDRTVRQWDLNSGKCTQTIDISFATGPMRSQRNIPLRNSVLLTKEPPAIGALQ 564
+VSGS DRT R WD+ +G+C ++I N V A+
Sbjct: 415 RFIVSGSGDRTARLWDVETGQCILKLEI---------------ENGVTAI-------AIS 452
Query: 565 CFDAALATGTKDGIVRLWDLRSGKVVRMLEGHTDAITSLQF--DSVNLVTGAMDRSIRIW 622
D +A G+ D I+R+W + SG +V LEGH +++ S+ F DS L++G++D++I++W
Sbjct: 453 PNDQFIAVGSLDQIIRVWSV-SGTLVERLEGHKESVYSIAFSPDSSILLSGSLDKTIKVW 511
Query: 623 DLR 625
+L+
Sbjct: 512 ELQ 514
Score = 57.0 bits (136), Expect = 1e-07
Identities = 33/121 (27%), Positives = 64/121 (52%), Gaps = 5/121 (4%)
Query: 408 PFGTMCSAGSLDHSVKVWDLSKKKQIATLHGHLASISCMQIDQYST-LITGGRDAVLKLW 466
P + GSLD ++VW +S + L GH S+ + S+ L++G D +K+W
Sbjct: 453 PNDQFIAVGSLDQIIRVWSVSGTL-VERLEGHKESVYSIAFSPDSSILLSGSLDKTIKVW 511
Query: 467 DIDKAMADEASNSSEDNDACLYTFDSHVDEITAISFDGDNL--VSGSQDRTVRQWDLNSG 524
++ +A ++ + C T+ H D + +++ D+ +SGS+DR+++ WDL +G
Sbjct: 512 EL-QATRSVGLSAIKPEGICKATYTGHTDFVLSVAVSPDSRWGLSGSKDRSMQFWDLQTG 570
Query: 525 K 525
+
Sbjct: 571 Q 571
Score = 52.0 bits (123), Expect = 3e-06
Identities = 26/60 (43%), Positives = 37/60 (61%), Gaps = 2/60 (3%)
Query: 570 LATGTKDGIVRLWDLRSGKVVRMLEGHTDAITSLQFDSVN--LVTGAMDRSIRIWDLRTG 627
L TGT+D ++LWDL + KV + GH I SL F +V+G+ DR+ R+WD+ TG
Sbjct: 375 LVTGTEDRQIKLWDLSTQKVRYVFSGHEQDIYSLDFSHNGRFIVSGSGDRTARLWDVETG 434
>7292737 [A] KOG0285 Pleiotropic regulator 1
Length = 482
Score = 87.0 bits (214), Expect = 9e-17
Identities = 71/262 (27%), Positives = 116/262 (44%), Gaps = 50/262 (19%)
Query: 419 DHSVKVWDLSKKKQIATLHGHLASISCMQI-DQYSTLITGGRDAVLKLWDIDKAMADEAS 477
D VK WDL K I HGHL+++ + + L T GRD+ ++WD+
Sbjct: 235 DRQVKCWDLEYNKVIRHYHGHLSAVYSLALHPTIDVLATSGRDSTARIWDM--------- 285
Query: 478 NSSEDNDACLYTFDSHVDEITAISFDGDN--LVSGSQDRTVRQWDLNSGKCTQTIDISFA 535
A ++T H + + ++ N +++GS D TVR WDL +GK T+
Sbjct: 286 ----RTKANVHTLTGHTNTVASVVAQATNPQIITGSHDSTVRLWDLAAGKSVCTL----- 336
Query: 536 TGPMRSQRNIPLRNSVLLTKEPPAIGALQCFDAALATGTKDGIVRLWDLRSGKVVRMLEG 595
T +S R+I L S+ + A+ + D I + W GK V+ + G
Sbjct: 337 TNHKKSVRSIVLHPSLYM----------------FASASPDNI-KQWRCPEGKFVQNISG 379
Query: 596 HTDAITSLQFDSVN-LVTGAMDRSIRIWDLRTGILSDVF-AYEQP--------ITSLHFD 645
HT + + +S LV+G + ++ WD RTG F A QP I ++ FD
Sbjct: 380 HTSIVNCMAANSEGVLVSGGDNGTMFFWDWRTGYNFQRFQAPVQPGSMDSEAGIFAMCFD 439
Query: 646 L--DKIVISNNEPTVKIYNRKD 665
+++ + + T+K+Y D
Sbjct: 440 QSGSRLITAEADKTIKVYKEDD 461
Score = 70.5 bits (171), Expect = 8e-12
Identities = 70/292 (23%), Positives = 119/292 (39%), Gaps = 59/292 (20%)
Query: 425 WDLSKKKQIATLHGHLASISCMQIDQYST-LITGGRDAVLKLWDIDKAMADEASNSSEDN 483
W LS+ + GHL + C+ ++ + TG D V+K+WD+ AS +
Sbjct: 162 WKLSR-----VISGHLGWVRCIAVEPGNEWFATGAGDRVIKIWDL-------ASGKLK-- 207
Query: 484 DACLYTFDSHVDEI--TAISFDGDNLVSGSQDRTVRQWDLNSGKCTQTIDISFATGPMRS 541
+ HV + A+S L S +DR V+ WDL K I G + +
Sbjct: 208 ----LSLTGHVSTVRGVAVSTKHPYLFSCGEDRQVKCWDLEYNKV-----IRHYHGHLSA 258
Query: 542 QRNIPLRNSVLLTKEPPAIGALQCFDAALATGTKDGIVRLWDLRSGKVVRMLEGHTDAIT 601
++ L ++ LAT +D R+WD+R+ V L GHT+ +
Sbjct: 259 VYSLALHPTI----------------DVLATSGRDSTARIWDMRTKANVHTLTGHTNTVA 302
Query: 602 SLQFDSVN--LVTGAMDRSIRIWDLRTG-ILSDVFAYEQPITSLHFDLDKIVISNNEPTV 658
S+ + N ++TG+ D ++R+WDL G + + +++ + S+ + ++ P
Sbjct: 303 SVVAQATNPQIITGSHDSTVRLWDLAAGKSVCTLTNHKKSVRSIVLHPSLYMFASASP-- 360
Query: 659 KIYNRKDGNHWFCGEDDPEQ---GNVDFVR----YKHGYLVEGRSNGDINTW 703
+ W C E Q G+ V G LV G NG + W
Sbjct: 361 -----DNIKQWRCPEGKFVQNISGHTSIVNCMAANSEGVLVSGGDNGTMFFW 407
>YBR198c [K] KOG0263 Transcription initiation factor TFIID subunit TAF5
(also component of histone acetyltransferase SAGA)
Length = 798
Score = 85.9 bits (211), Expect = 2e-16
Identities = 71/288 (24%), Positives = 121/288 (41%), Gaps = 61/288 (21%)
Query: 397 DEDITCLDFDMPFGTMCS-----------AGSLDHSVKVWDLSKKKQIATLHGH---LAS 442
DED TC GT+ S +GS D +V++W + + + GH +
Sbjct: 513 DEDPTCKTLVGHSGTVYSTSFSPDNKYLLSGSEDKTVRLWSMDTHTALVSYKGHNHPVWD 572
Query: 443 ISCMQIDQYSTLITGGRDAVLKLWDIDKAMADEASNSSEDNDACLYTFDSHVDEITAISF 502
+S + Y T D +LW D L F H++++ +SF
Sbjct: 573 VSFSPLGHY--FATASHDQTARLWSCDHIYP-------------LRIFAGHLNDVDCVSF 617
Query: 503 --DGDNLVSGSQDRTVRQWDLNSGKCTQTIDISFATGPMRSQRNIPLRNSVLLTKEPPAI 560
+G + +GS D+T R WD+++G + + L P I
Sbjct: 618 HPNGCYVFTGSSDKTCRMWDVSTGDSVR----------------------LFLGHTAPVI 655
Query: 561 GALQCFDAA-LATGTKDGIVRLWDLRSGKVVRMLEGH-TDAITSLQFDSVN--LVTGAMD 616
C D L+TG++DGI+ +WD+ +GK ++ + GH +AI SL + L++G D
Sbjct: 656 SIAVCPDGRWLSTGSEDGIINVWDIGTGKRLKQMRGHGKNAIYSLSYSKEGNVLISGGAD 715
Query: 617 RSIRIWDLRTGILSDVFAYEQPITSLHFDLDKIVISNNEPTVKIYNRK 664
++R+WDL+ ++P L + S N+ +K Y R+
Sbjct: 716 HTVRVWDLKKATTEPSAEPDEPFIGY---LGDVTASINQ-DIKEYGRR 759
>At1g49040 [T] KOG2127 Calmodulin-binding protein CRAG contains DENN domain
Length = 1264
Score = 85.9 bits (211), Expect = 2e-16
Identities = 71/289 (24%), Positives = 127/289 (43%), Gaps = 42/289 (14%)
Query: 372 RRKTYPTLQQFYDSGSKITSLPKAHDEDITCLDFDMPFGTMCSAGSLDHSVKVWDLSKK- 430
++K ++ G +T+L ++ L D +GS D VK+WD S +
Sbjct: 906 QKKIQTNVRVLKGHGGAVTALHSVTRREVCDLVGDREDAGFFISGSTDCLVKIWDPSLRG 965
Query: 431 -KQIATLHGHLASISCMQIDQYSTLITGGRDAVLKLWDIDKAMADEASNSSEDNDACLYT 489
+ ATL GH ++ + D+ +++G D + +WD E L
Sbjct: 966 SELRATLKGHTGTVRAISSDR-GKIVSGSDDLSVIVWDKQTTQLLEE----------LKG 1014
Query: 490 FDSHVDEITAISFDGDNLVSGSQDRTVRQWDLNSGKCTQTIDISFATGPMRSQRNIPLRN 549
DS V + +S G+ +++ + D TV+ WD+ + C T+
Sbjct: 1015 HDSQVSCVKMLS--GERVLTAAHDGTVKMWDVRTDMCVATVG------------------ 1054
Query: 550 SVLLTKEPPAIGALQCFDAA--LATGTKDGIVRLWDLRSGKVVRMLEGHTDAITSLQFDS 607
+ AI +L+ D+ LA +D + +WD+RSGK + L+GHT I S++
Sbjct: 1055 -----RCSSAILSLEYDDSTGILAAAGRDTVANIWDIRSGKQMHKLKGHTKWIRSIRMVE 1109
Query: 608 VNLVTGAMDRSIRIWDLRTGILSDVFA-YEQPITSLHFD-LDKIVISNN 654
L+TG+ D + R+W + G V A + P+ S+ + DK +I+ +
Sbjct: 1110 DTLITGSDDWTARVWSVSRGSCDAVLACHAGPVQSVEYSPFDKGIITGS 1158
Score = 77.4 bits (189), Expect = 7e-14
Identities = 66/268 (24%), Positives = 110/268 (40%), Gaps = 55/268 (20%)
Query: 386 GSKITSLPKAHDEDITCLDFDMPFGTMCSAGSLDHSVKVWDLSKKKQIATLHGHLASISC 445
GS++ + K H + + D G + S GS D SV VWD + + L GH + +SC
Sbjct: 965 GSELRATLKGHTGTVRAISSDR--GKIVS-GSDDLSVIVWDKQTTQLLEELKGHDSQVSC 1021
Query: 446 MQIDQYSTLITGGRDAVLKLWDIDKAMA-------DEASNSSEDNDAC------------ 486
+++ ++T D +K+WD+ M A S E +D+
Sbjct: 1022 VKMLSGERVLTAAHDGTVKMWDVRTDMCVATVGRCSSAILSLEYDDSTGILAAAGRDTVA 1081
Query: 487 ----------LYTFDSHVDEITAISFDGDNLVSGSQDRTVRQWDLNSGKCTQTIDISFAT 536
++ H I +I D L++GS D T R W ++ G C + +
Sbjct: 1082 NIWDIRSGKQMHKLKGHTKWIRSIRMVEDTLITGSDDWTARVWSVSRGSCDAVL--ACHA 1139
Query: 537 GPMRSQRNIPLRNSVLLTKEPPAIGALQCFDAALATGTKDGIVRLWDLRSG--KVVRMLE 594
GP++S P FD + TG+ DG++R W+ G K V+ +
Sbjct: 1140 GPVQSVEYSP-------------------FDKGIITGSADGLLRFWENDEGGIKCVKNIT 1180
Query: 595 GHTDAITSLQFDSVNLVTGAMDRSIRIW 622
H+ +I S+ L GA D S+ ++
Sbjct: 1181 LHSSSILSINAGENWLGIGAADNSMSLF 1208
>At1g61210 [D] KOG0267 Microtubule severing protein katanin p80 subunit B
(contains WD40 repeats)
Length = 282
Score = 85.1 bits (209), Expect = 3e-16
Identities = 62/247 (25%), Positives = 104/247 (42%), Gaps = 49/247 (19%)
Query: 395 AHDEDITCLDFDMPFGTMCSAGSLDHSVKVWDLSKKKQIA----------TLHGHLASIS 444
AH ++ CL + G D+ V +W + K + +L GH +++
Sbjct: 33 AHSANVNCLSIGKKTSRLFITGGDDYKVNLWAIGKPTSLMKNDAIAFYWQSLCGHTSAVD 92
Query: 445 CMQIDQYSTLITGGRDA-VLKLWDIDKAMADEASNSSEDNDACLYTFDSHVDEITAISFD 503
+ D L+ G + V+KLWD+++A A F H +A+ F
Sbjct: 93 SVAFDSAEVLVLAGASSGVIKLWDVEEAKMVRA-------------FTGHRSNCSAVEFH 139
Query: 504 --GDNLVSGSQDRTVRQWDLNSGKCTQTIDISFATGPMRSQRNIPLRNSVLLTKEPPAIG 561
G+ L SGS D ++ WD+ C QT R I +++ T +
Sbjct: 140 PFGEFLASGSSDANLKIWDIRKKGCIQTY--------KGHSRGI---STIRFTPD----- 183
Query: 562 ALQCFDAALATGTKDGIVRLWDLRSGKVVRMLEGHTDAITSLQFDSVN--LVTGAMDRSI 619
+ +G D +V++WDL +GK++ + H I SL F + L TG+ DR++
Sbjct: 184 -----GRWVVSGGLDNVVKVWDLTAGKLLHEFKFHEGPIRSLDFHPLEFLLATGSADRTV 238
Query: 620 RIWDLRT 626
+ WDL T
Sbjct: 239 KFWDLET 245
Score = 77.0 bits (188), Expect = 9e-14
Identities = 53/179 (29%), Positives = 81/179 (44%), Gaps = 37/179 (20%)
Query: 415 AGSLDHSVKVWDLSKKKQIATLHGHLASISCMQIDQYST-LITGGRDAVLKLWDIDKAMA 473
AG+ +K+WD+ + K + GH ++ S ++ + L +G DA LK+WDI K
Sbjct: 105 AGASSGVIKLWDVEEAKMVRAFTGHRSNCSAVEFHPFGEFLASGSSDANLKIWDIRK--- 161
Query: 474 DEASNSSEDNDACLYTFDSHVDEITAISF--DGDNLVSGSQDRTVRQWDLNSGKCTQTID 531
C+ T+ H I+ I F DG +VSG D V+ WDL +GK +
Sbjct: 162 ----------KGCIQTYKGHSRGISTIRFTPDGRWVVSGGLDNVVKVWDLTAGKLLH--E 209
Query: 532 ISFATGPMRSQRNIPLRNSVLLTKEPPAIGALQCFDAALATGTKDGIVRLWDLRSGKVV 590
F GP+RS PL + LATG+ D V+ WDL + +++
Sbjct: 210 FKFHEGPIRSLDFHPL-------------------EFLLATGSADRTVKFWDLETFELI 249
Score = 76.3 bits (186), Expect = 2e-13
Identities = 60/236 (25%), Positives = 113/236 (47%), Gaps = 39/236 (16%)
Query: 439 HLASISCMQIDQYST--LITGGRDAVLKLWDIDKAMADEASNSSEDNDACLYTFDS---H 493
H A+++C+ I + ++ ITGG D + LW I K S NDA + + S H
Sbjct: 34 HSANVNCLSIGKKTSRLFITGGDDYKVNLWAIGKP------TSLMKNDAIAFYWQSLCGH 87
Query: 494 VDEITAISFDGDNLV--SGSQDRTVRQWDLNSGKCTQTIDISFATGPMRSQRNIPLRNSV 551
+ +++FD ++ +G+ ++ WD+ K + TG R++
Sbjct: 88 TSAVDSVAFDSAEVLVLAGASSGVIKLWDVEEAKMVRAF-----TGH---------RSNC 133
Query: 552 LLTKEPPAIGALQCFDAALATGTKDGIVRLWDLRSGKVVRMLEGHTDAITSLQF--DSVN 609
+ P F LA+G+ D +++WD+R ++ +GH+ I++++F D
Sbjct: 134 SAVEFHP-------FGEFLASGSSDANLKIWDIRKKGCIQTYKGHSRGISTIRFTPDGRW 186
Query: 610 LVTGAMDRSIRIWDLRTGILSDVFAY-EQPITSLHFDLDKIVISNN--EPTVKIYN 662
+V+G +D +++WDL G L F + E PI SL F + +++ + TVK ++
Sbjct: 187 VVSGGLDNVVKVWDLTAGKLLHEFKFHEGPIRSLDFHPLEFLLATGSADRTVKFWD 242
Score = 51.2 bits (121), Expect = 5e-06
Identities = 29/109 (26%), Positives = 57/109 (51%), Gaps = 8/109 (7%)
Query: 566 FDAA---LATGTKDGIVRLWDLRSGKVVRMLEGHTDAITSLQFDSVN--LVTGAMDRSIR 620
FD+A + G G+++LWD+ K+VR GH ++++F L +G+ D +++
Sbjct: 96 FDSAEVLVLAGASSGVIKLWDVEEAKMVRAFTGHRSNCSAVEFHPFGEFLASGSSDANLK 155
Query: 621 IWDLR-TGILSDVFAYEQPITSLHFDLDK--IVISNNEPTVKIYNRKDG 666
IWD+R G + + + I+++ F D +V + VK+++ G
Sbjct: 156 IWDIRKKGCIQTYKGHSRGISTIRFTPDGRWVVSGGLDNVVKVWDLTAG 204
>Hs5031817 [D] KOG0267 Microtubule severing protein katanin p80 subunit B
(contains WD40 repeats)
Length = 655
Score = 84.7 bits (208), Expect = 4e-16
Identities = 64/213 (30%), Positives = 95/213 (44%), Gaps = 40/213 (18%)
Query: 415 AGSLDHSVKVWDLSKKKQIATLHGHLASISCMQIDQYSTLI-TGGRDAVLKLWDIDKAMA 473
AGS S++VWDL K + TL G A+I + Y + +G +D +KLWDI +
Sbjct: 80 AGSQSGSIRVWDLEAAKILRTLMGLKANICSLDFHPYGEFVASGSQDTNIKLWDIRRK-- 137
Query: 474 DEASNSSEDNDACLYTFDSHVDEITAISF--DGDNLVSGSQDRTVRQWDLNSGKCTQTID 531
C++ + H + + F DG L S + D TV+ WDL +GK +
Sbjct: 138 -----------GCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMS--E 184
Query: 532 ISFATGPMRSQRNIPLRNSVLLTKEPPAIGALQCFDAALATGTKDGIVRLWDLRSGKVVR 591
TGP+ P N LL A+G+ DG +R WDL +VV
Sbjct: 185 FPGHTGPVNVVEFHP--NEYLL-----------------ASGSSDGTIRFWDLEKFQVVS 225
Query: 592 MLEGHTDAITSLQF--DSVNLVTGAMDRSIRIW 622
+EG + S+ F D L +G D S+R++
Sbjct: 226 RIEGEPGPVRSVLFNPDGCCLYSGCQD-SLRVY 257
Score = 62.4 bits (150), Expect = 2e-09
Identities = 54/219 (24%), Positives = 91/219 (40%), Gaps = 30/219 (13%)
Query: 492 SHVDEITAISFDGDNLVSGSQDRTVRQWDLNSGKCTQTIDISFATGPMRSQRNIPLRNSV 551
S+V + G L +G D V W +N C ++ + T P+ S R
Sbjct: 21 SNVSSLVLGKASGRLLATGGDDCRVNLWSINKPNCIMSL--TGHTSPVESVR-------- 70
Query: 552 LLTKEPPAIGALQCFDAALATGTKDGIVRLWDLRSGKVVRMLEGHTDAITSLQFDSVN-- 609
L + + G++ G +R+WDL + K++R L G I SL F
Sbjct: 71 -----------LNTPEELIVAGSQSGSIRVWDLEAAKILRTLMGLKANICSLDFHPYGEF 119
Query: 610 LVTGAMDRSIRIWDL-RTGILSDVFAYEQPITSLHFDLDK--IVISNNEPTVKIYNRKDG 666
+ +G+ D +I++WD+ R G + + Q + L F D + + ++ TVK+++ G
Sbjct: 120 VASGSQDTNIKLWDIRRKGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAG 179
Query: 667 NHWFCGEDDPEQGNVDFVRY--KHGYLVEGRSNGDINTW 703
E G V+ V + L G S+G I W
Sbjct: 180 K--MMSEFPGHTGPVNVVEFHPNEYLLASGSSDGTIRFW 216
Score = 61.2 bits (147), Expect = 5e-09
Identities = 42/148 (28%), Positives = 68/148 (45%), Gaps = 23/148 (15%)
Query: 399 DITCLDFDMPFGTMCSAGSLDHSVKVWDLSKKKQIATLHGHLASISCMQID-QYSTLITG 457
+I LDF P+G ++GS D ++K+WD+ +K + GH ++ C++ L +
Sbjct: 107 NICSLDFH-PYGEFVASGSQDTNIKLWDIRRKGCVFRYRGHSQAVRCLRFSPDGKWLASA 165
Query: 458 GRDAVLKLWDI--DKAMADEASNSSEDNDACLYTFDSHVDEITAISFDGDN--LVSGSQD 513
D +KLWD+ K M++ F H + + F + L SGS D
Sbjct: 166 ADDHTVKLWDLTAGKMMSE---------------FPGHTGPVNVVEFHPNEYLLASGSSD 210
Query: 514 RTVRQWDLNSGKCTQTIDISFATGPMRS 541
T+R WDL + I+ GP+RS
Sbjct: 211 GTIRFWDLEKFQVVSRIE--GEPGPVRS 236
>7290331 [R] KOG0266 WD40 repeat-containing protein
Length = 361
Score = 84.7 bits (208), Expect = 4e-16
Identities = 65/241 (26%), Positives = 108/241 (43%), Gaps = 47/241 (19%)
Query: 415 AGSLDHSVKVWDLSKKKQIATLHGHLASISCMQIDQYSTLITGGR-DAVLKLWDIDKAMA 473
+GS D ++KVW+LS K + TL GH + C + S LI G D +++WD+
Sbjct: 131 SGSDDKTLKVWELSTGKSLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGK- 189
Query: 474 DEASNSSEDNDACLYTFDSHVDEITAISF--DGDNLVSGSQDRTVRQWDLNSGKCTQTID 531
CL T +H D ++A+ F DG +VS S D R WD SG+C +T+
Sbjct: 190 ------------CLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTL- 236
Query: 532 ISFATGPMRSQRNIPLRNSVLLTKEPPAI------------------GALQCFDAA---- 569
I P+ + P +L + C A
Sbjct: 237 IDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVT 296
Query: 570 ----LATGTKDGIVRLWDLRSGKVVRMLEGHTDAI-TSLQFDSVNLVTGAM---DRSIRI 621
+ +G++D +V +W+L+S +VV+ L+GHTD + + + N++ A D++I++
Sbjct: 297 GGKWIVSGSEDNMVYIWNLQSKEVVQKLQGHTDTVLCTACHPTENIIASAALENDKTIKL 356
Query: 622 W 622
W
Sbjct: 357 W 357
Score = 78.6 bits (192), Expect = 3e-14
Identities = 64/251 (25%), Positives = 119/251 (46%), Gaps = 44/251 (17%)
Query: 473 ADEASNSSEDNDACL---------YTFDSHVDEITAISF--DGDNLVSGSQDRTVRQWDL 521
A +SNSS N + L +T H ++A+ F +G+ L S S D+ ++ W
Sbjct: 42 ATTSSNSSASNKSSLSVKPNYTLKFTLAGHTKAVSAVKFSPNGEWLASSSADKLIKIWGA 101
Query: 522 NSGKCTQTIDISFATGPMRSQRNIPLRNSVLLTKEPPAIGALQCFDAALATGTKDGIVRL 581
GK +TI +G ++ + L L +G+ D +++
Sbjct: 102 YDGKFEKTI-----SGHKLGISDVAWSSDSRL----------------LVSGSDDKTLKV 140
Query: 582 WDLRSGKVVRMLEGHTDAITSLQFD--SVNLVTGAMDRSIRIWDLRTG-ILSDVFAYEQP 638
W+L +GK ++ L+GH++ + F+ S +V+G+ D S+RIWD+RTG L + A+ P
Sbjct: 141 WELSTGKSLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKTLPAHSDP 200
Query: 639 ITSLHFDLD--KIVISNNEPTVKIYNRKDGN--HWFCGEDDPEQGNVDFVRYKHG--YLV 692
++++HF+ D IV S+ + +I++ G +D+P V FV++ Y++
Sbjct: 201 VSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPP---VSFVKFSPNGKYIL 257
Query: 693 EGRSNGDINTW 703
+ + W
Sbjct: 258 AATLDNTLKLW 268
Score = 70.5 bits (171), Expect = 8e-12
Identities = 53/238 (22%), Positives = 106/238 (44%), Gaps = 41/238 (17%)
Query: 396 HDEDITCLDFDMPFGTMCSAGSLDHSVKVWDLSKKKQIATLHGHLASISCMQIDQYS-TL 454
H + ++ + F P G ++ S D +K+W K T+ GH IS + S L
Sbjct: 71 HTKAVSAVKFS-PNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSRLL 129
Query: 455 ITGGRDAVLKLWDIDKAMADEASNSSEDNDACLYTFDSHVDEITAISFDGDN--LVSGSQ 512
++G D LK+W++ + L T H + + +F+ + +VSGS
Sbjct: 130 VSGSDDKTLKVWELSTGKS-------------LKTLKGHSNYVFCCNFNPQSNLIVSGSF 176
Query: 513 DRTVRQWDLNSGKCTQTIDISFATGPMRSQRNIPLRNSVLLTKEPPAIGALQCFDAALAT 572
D +VR WD+ +GKC +T+ P S +P + + + +
Sbjct: 177 DESVRIWDVRTGKCLKTL-------PAHS--------------DPVSAVHFNRDGSLIVS 215
Query: 573 GTKDGIVRLWDLRSGKVVR-MLEGHTDAITSLQF--DSVNLVTGAMDRSIRIWDLRTG 627
+ DG+ R+WD SG+ ++ +++ ++ ++F + ++ +D ++++WD G
Sbjct: 216 SSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKG 273
>YCR084c [R] KOG0266 WD40 repeat-containing protein
Length = 713
Score = 84.0 bits (206), Expect = 7e-16
Identities = 55/183 (30%), Positives = 89/183 (48%), Gaps = 45/183 (24%)
Query: 454 LITGGRDAVLKLWDIDKAMADEASNSSEDNDACLYTFDSHVDEITAISF--DGDNLVSGS 511
L TG D ++++WDI+ N + H +I ++ + GD LVSGS
Sbjct: 458 LATGAEDRLIRIWDIE-------------NRKIVMILQGHEQDIYSLDYFPSGDKLVSGS 504
Query: 512 QDRTVRQWDLNSGKCTQTIDISFATGPMRSQRNIPLRNSVLLTKEPPAIGALQCFDAALA 571
DRTVR WDL +G+C+ T+ I + V P G +A
Sbjct: 505 GDRTVRIWDLRTGQCSLTLSI---------------EDGVTTVAVSPGDGKY------IA 543
Query: 572 TGTKDGIVRLWDLRSGKVVRMLE-------GHTDAITSLQF--DSVNLVTGAMDRSIRIW 622
G+ D VR+WD +G +V L+ GH D++ S+ F D ++V+G++DRS+++W
Sbjct: 544 AGSLDRAVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTRDGQSVVSGSLDRSVKLW 603
Query: 623 DLR 625
+L+
Sbjct: 604 NLQ 606
Score = 75.9 bits (185), Expect = 2e-13
Identities = 65/250 (26%), Positives = 115/250 (46%), Gaps = 35/250 (14%)
Query: 388 KITSLPKAHDEDITCLDFDMPFGTMCSAGSLDHSVKVWDLSKKKQIATL--HGHLASISC 445
KI + + H++DI LD+ P G +GS D +V++WDL + TL + +++
Sbjct: 476 KIVMILQGHEQDIYSLDY-FPSGDKLVSGSGDRTVRIWDLRTGQCSLTLSIEDGVTTVAV 534
Query: 446 MQIDQYSTLITGGRDAVLKLWDIDKAMADEASNSSEDNDACLYTFDSHVDEITAISF--D 503
D + G D +++WD + E +S ++ H D + ++ F D
Sbjct: 535 SPGDG-KYIAAGSLDRAVRVWDSETGFLVERLDSENESGT------GHKDSVYSVVFTRD 587
Query: 504 GDNLVSGSQDRTVRQWDL---NSGKCTQTIDISFATGPMRSQRNIPLRNSVLLTKEPPAI 560
G ++VSGS DR+V+ W+L N+ ++T + ++ L SV T+
Sbjct: 588 GQSVVSGSLDRSVKLWNLQNANNKSDSKTPNSGTCEVTYIGHKDFVL--SVATTQN---- 641
Query: 561 GALQCFDAALATGTKDGIVRLWDLRSGKVVRMLEGHTDAITSLQFDSVN--------LVT 612
D + +G+KD V WD +SG + ML+GH +++ S+ + + T
Sbjct: 642 ------DEYILSGSKDRGVLFWDKKSGNPLLMLQGHRNSVISVAVANGSPLGPEYNVFAT 695
Query: 613 GAMDRSIRIW 622
G+ D RIW
Sbjct: 696 GSGDCKARIW 705
Score = 67.8 bits (164), Expect = 5e-11
Identities = 52/235 (22%), Positives = 96/235 (40%), Gaps = 40/235 (17%)
Query: 408 PFGTMCSAGSLDHSVKVWDLSKKKQIATLHGHLASI-SCMQIDQYSTLITGGRDAVLKLW 466
P G + G+ D +++WD+ +K + L GH I S L++G D +++W
Sbjct: 453 PDGKFLATGAEDRLIRIWDIENRKIVMILQGHEQDIYSLDYFPSGDKLVSGSGDRTVRIW 512
Query: 467 DIDKAMADEASNSSEDNDACLYTFDSHVDEITAISFDGDNLVSGSQDRTVRQWDLNSGKC 526
D+ + + + V + DG + +GS DR VR WD +G
Sbjct: 513 DLRTGQC-----------SLTLSIEDGVTTVAVSPGDGKYIAAGSLDRAVRVWDSETGFL 561
Query: 527 TQTIDISFATGPMRSQRNIPLRNSVLLTKEPPAIGALQCFDAALATGTKDGIVRLWDLR- 585
+ +D +G SV+ T++ ++ +G+ D V+LW+L+
Sbjct: 562 VERLDSENESGTGHKDSVY----SVVFTRDGQSV----------VSGSLDRSVKLWNLQN 607
Query: 586 -----------SGKVVRMLEGHTDAITSLQF--DSVNLVTGAMDRSIRIWDLRTG 627
SG GH D + S+ + +++G+ DR + WD ++G
Sbjct: 608 ANNKSDSKTPNSGTCEVTYIGHKDFVLSVATTQNDEYILSGSKDRGVLFWDKKSG 662
Score = 67.4 bits (163), Expect = 7e-11
Identities = 32/75 (42%), Positives = 50/75 (66%), Gaps = 2/75 (2%)
Query: 570 LATGTKDGIVRLWDLRSGKVVRMLEGHTDAITSLQF--DSVNLVTGAMDRSIRIWDLRTG 627
LATG +D ++R+WD+ + K+V +L+GH I SL + LV+G+ DR++RIWDLRTG
Sbjct: 458 LATGAEDRLIRIWDIENRKIVMILQGHEQDIYSLDYFPSGDKLVSGSGDRTVRIWDLRTG 517
Query: 628 ILSDVFAYEQPITSL 642
S + E +T++
Sbjct: 518 QCSLTLSIEDGVTTV 532
Score = 57.8 bits (138), Expect = 6e-08
Identities = 43/180 (23%), Positives = 81/180 (44%), Gaps = 37/180 (20%)
Query: 503 DGDNLVSGSQDRTVRQWDLNSGKCTQTIDISFATGPMRSQRNIPLRNSVLLTKEPPAIGA 562
DG L +G++DR +R WD+ + K ++L I +
Sbjct: 454 DGKFLATGAEDRLIRIWDIENRKIV-----------------------MILQGHEQDIYS 490
Query: 563 LQCFDAA--LATGTKDGIVRLWDLRSGK--VVRMLEGHTDAITSLQFDSVNLVTGAMDRS 618
L F + L +G+ D VR+WDLR+G+ + +E + D + G++DR+
Sbjct: 491 LDYFPSGDKLVSGSGDRTVRIWDLRTGQCSLTLSIEDGVTTVAVSPGDGKYIAAGSLDRA 550
Query: 619 IRIWDLRTGILSDVF--------AYEQPITSLHFDLD--KIVISNNEPTVKIYNRKDGNH 668
+R+WD TG L + ++ + S+ F D +V + + +VK++N ++ N+
Sbjct: 551 VRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTRDGQSVVSGSLDRSVKLWNLQNANN 610
>Hs9506645 [R] KOG0266 WD40 repeat-containing protein
Length = 330
Score = 84.0 bits (206), Expect = 7e-16
Identities = 68/280 (24%), Positives = 130/280 (46%), Gaps = 37/280 (13%)
Query: 351 ERKKHSTSKKIKDVGVSHRNRRRKTYP---TLQQFYDSGSKITSLPKAHDEDITCLDFDM 407
E+ + + +I DV S + R + TL+ + K K H + C +F+
Sbjct: 76 EKTLYGHNLEISDVAWSSDSSRLVSASDDKTLKLWDVRSGKCLKTLKGHSNYVFCCNFNP 135
Query: 408 PFGTMCSAGSLDHSVKVWDLSKKKQIATLHGHLASISCMQID-QYSTLITGGRDAVLKLW 466
P + S GS D +VK+W++ K + TL H +S + + S +++G D + ++W
Sbjct: 136 PSNLIIS-GSFDETVKIWEVKTGKCLKTLSAHSDPVSAVHFNCSGSLIVSGSYDGLCRIW 194
Query: 467 DIDKAMADEASNSSEDNDACLYTFDSHVDEITAISFDGDNLVSGSQDRTVRQWDLNSGKC 526
D A + + + D+D +F S +G +++ + D T++ WD + G+C
Sbjct: 195 D---AASGQCLKTLVDDDNPPVSF-------VKFSPNGKYILTATLDNTLKLWDYSRGRC 244
Query: 527 TQTIDISFATGPMRSQRNIPLRNSVLLTKEPPAIGALQCFDAALATGTKDGIVRLWDLRS 586
+T TG + I SV K + +G++D +V +W+L++
Sbjct: 245 LKTY-----TGQKNEKYCIFANFSVTGGKW-------------IVSGSEDNLVYIWNLQT 286
Query: 587 GKVVRMLEGHTDAITSLQ-FDSVNLVTGAM---DRSIRIW 622
++V+ L+GHTD + S + NL+ A D++I++W
Sbjct: 287 KEIVQKLQGHTDVVISAACHPTENLIASAALENDKTIKLW 326
Score = 82.8 bits (203), Expect = 2e-15
Identities = 58/238 (24%), Positives = 103/238 (42%), Gaps = 41/238 (17%)
Query: 396 HDEDITCLDFDMPFGTMCSAGSLDHSVKVWDLSKKKQIATLHGHLASISCMQ-IDQYSTL 454
H E ++ + F P G ++ S D + +W K TL+GH IS + S L
Sbjct: 40 HTEAVSSVKFS-PNGEWLASSSADRLIIIWGAYDGKYEKTLYGHNLEISDVAWSSDSSRL 98
Query: 455 ITGGRDAVLKLWDIDKAMADEASNSSEDNDACLYTFDSHVDEITAISFD--GDNLVSGSQ 512
++ D LKLWD+ + CL T H + + +F+ + ++SGS
Sbjct: 99 VSASDDKTLKLWDV-------------RSGKCLKTLKGHSNYVFCCNFNPPSNLIISGSF 145
Query: 513 DRTVRQWDLNSGKCTQTIDISFATGPMRSQRNIPLRNSVLLTKEPPAIGALQCFDAALAT 572
D TV+ W++ +GKC +T+ +P + C + + +
Sbjct: 146 DETVKIWEVKTGKCLKTLSAH---------------------SDPVSAVHFNCSGSLIVS 184
Query: 573 GTKDGIVRLWDLRSGKVVRMLEGHTDAITSLQFDSVN---LVTGAMDRSIRIWDLRTG 627
G+ DG+ R+WD SG+ ++ L + S S N ++T +D ++++WD G
Sbjct: 185 GSYDGLCRIWDAASGQCLKTLVDDDNPPVSFVKFSPNGKYILTATLDNTLKLWDYSRG 242
>Hs4557741 [S] KOG0295 WD40 repeat-containing protein
Length = 410
Score = 83.6 bits (205), Expect = 1e-15
Identities = 76/320 (23%), Positives = 135/320 (41%), Gaps = 73/320 (22%)
Query: 396 HDEDITCLDFDMPFGTMCSAGSLDHSVKVWDLSKKKQIATLHGHLASISCMQIDQYSTLI 455
H +T + F F M SA S D ++KVWD TL GH S+ + D L+
Sbjct: 107 HRSPVTRVIFHPVFSVMVSA-SEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLL 165
Query: 456 TG-GRDAVLKLWDIDKAMADEASNSSEDNDACLYTFDSHVDEITAISF--DGDNLVSGSQ 512
D +KLWD C+ T H +++++ +GD++VS S+
Sbjct: 166 ASCSADMTIKLWDFQ-------------GFECIRTMHGHDHNVSSVAIMPNGDHIVSASR 212
Query: 513 DRTVRQWDLNSGKCTQTIDISFATGPMRSQRNI----------------PLRNSVLLTKE 556
D+T++ W++ +G C +T TG R + +R V+ TKE
Sbjct: 213 DKTIKMWEVQTGYCVKTF-----TGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKE 267
Query: 557 PPA-----IGALQCFDAA-------------------------LATGTKDGIVRLWDLRS 586
A ++C A L +G++D +++WD+ +
Sbjct: 268 CKAELREHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVST 327
Query: 587 GKVVRMLEGHTDAITSLQFDSVN--LVTGAMDRSIRIWDLRT-GILSDVFAYEQPITSL- 642
G + L GH + + + F S +++ A D+++R+WD + + + A+E +TSL
Sbjct: 328 GMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLD 387
Query: 643 -HFDLDKIVISNNEPTVKIY 661
H +V + + TVK++
Sbjct: 388 FHKTAPYVVTGSVDQTVKVW 407
Score = 74.3 bits (181), Expect = 6e-13
Identities = 62/290 (21%), Positives = 122/290 (41%), Gaps = 37/290 (12%)
Query: 351 ERKKHSTSKKIKDVGVSHRNRRRKTYP---TLQQFYDSGSKITSLPKAHDEDITCLDFDM 407
ER + ++D+ H + + T++ + G + HD +++ + M
Sbjct: 143 ERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAI-M 201
Query: 408 PFGTMCSAGSLDHSVKVWDLSKKKQIATLHGHLASISCMQIDQYSTLITG-GRDAVLKLW 466
P G + S D ++K+W++ + T GH + ++ +Q TLI D +++W
Sbjct: 202 PNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVW 261
Query: 467 DIDKAMADEASNSSEDNDACLY----TFDSHVDEITAISFD-----GDNLVSGSQDRTVR 517
+ E C+ + S + E T G L+SGS+D+T++
Sbjct: 262 VVATKECKAELREHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIK 321
Query: 518 QWDLNSGKCTQTIDISFATGPMRSQRNIPLRNSVLLTKEPPAIGALQCFDAALATGTKDG 577
WD+++G C T+ G R + + L C D D
Sbjct: 322 MWDVSTGMCLMTL-----VGHDNWVRGVLFHSGGKF--------ILSCAD--------DK 360
Query: 578 IVRLWDLRSGKVVRMLEGHTDAITSLQFDSV--NLVTGAMDRSIRIWDLR 625
+R+WD ++ + ++ L H +TSL F +VTG++D+++++W+ R
Sbjct: 361 TLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWECR 410
Score = 53.9 bits (128), Expect = 8e-07
Identities = 40/181 (22%), Positives = 87/181 (47%), Gaps = 28/181 (15%)
Query: 488 YTFDSHVDEITAISFDG--DNLVSGSQDRTVRQWDLNSGKCTQTIDISFATGPMRSQRNI 545
Y H +T + F +VS S+D T++ WD +G +T+ G S ++I
Sbjct: 102 YALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLK-----GHTDSVQDI 156
Query: 546 PLRNSVLLTKEPPAIGALQCFDAALATGTKDGIVRLWDLRSGKVVRMLEGHTDAITSLQF 605
+S L LA+ + D ++LWD + + +R + GH ++S+
Sbjct: 157 SFDHSGKL----------------LASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAI 200
Query: 606 --DSVNLVTGAMDRSIRIWDLRTGILSDVF-AYEQPITSLHFDLDKIVIS--NNEPTVKI 660
+ ++V+ + D++I++W+++TG F + + + + + D +I+ +N+ TV++
Sbjct: 201 MPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRV 260
Query: 661 Y 661
+
Sbjct: 261 W 261
>CE02043 [R] KOG0289 mRNA splicing factor
Length = 509
Score = 83.6 bits (205), Expect = 1e-15
Identities = 82/321 (25%), Positives = 136/321 (41%), Gaps = 50/321 (15%)
Query: 340 LQDHEKKSDISERKKHSTSKKIKDVGVSHRNRRRKTYPT-------LQQFYDSGSKITSL 392
+ + E + +SE +K K + + R +R K P L + + S T +
Sbjct: 166 IDESEDQQGLSEAILAKLEEKSKSL-TAERKQRGKNLPEGLAKTEELAELKQTASH-TGI 223
Query: 393 PKAHDEDITCLDFDMPFGTMCSAGSLDHSVKVWDLSKKKQIATLHGHLASISCMQIDQYS 452
IT LD G + G +D +V ++D K++ + T GH I+ + + +
Sbjct: 224 HSTGTPGITALDIK---GNLSLTGGIDKTVVLYDYEKEQVMQTFKGHNKKINAVVLHPDN 280
Query: 453 -TLITGGRDAVLKLWDIDKAMADEASNSSEDNDACLYTFDSHVDEITAISFD--GDNLVS 509
T I+ D+ +++W A ++S+ + D H +T IS + GD ++S
Sbjct: 281 ITAISASADSHIRVWS-----ATDSSSKA--------IIDVHQAPVTDISLNASGDYILS 327
Query: 510 GSQDRTVRQWDLNSGKCTQTIDISFATGPMRSQRNIPLRNSVLLTKEPPAIGALQCFDAA 569
S D D+ SGK +S G + +I L+
Sbjct: 328 ASDDSYWAFSDIRSGK--SLCKVSVEPGSQIAVHSIEFHPDGLI---------------- 369
Query: 570 LATGTKDGIVRLWDLRSGKVVRMLEGHTDAITSLQF--DSVNLVTGAMDRSIRIWDLRTG 627
TG D +V++WDL++ V GHT A+ S+ F + L TG+ D +++WDLR
Sbjct: 370 FGTGAADAVVKIWDLKNQTVAAAFPGHTAAVRSIAFSENGYYLATGSEDGEVKLWDLRKL 429
Query: 628 ILSDVFAYE--QPITSLHFDL 646
FA E QPI SL FD+
Sbjct: 430 KNLKTFANEEKQPINSLSFDM 450
>Hs7657439 [K] KOG0263 Transcription initiation factor TFIID subunit TAF5
(also component of histone acetyltransferase SAGA)
Length = 589
Score = 83.2 bits (204), Expect = 1e-15
Identities = 62/214 (28%), Positives = 91/214 (41%), Gaps = 39/214 (18%)
Query: 417 SLDHSVKVWDLSKKKQIATLHGHLASISCMQIDQYST-LITGGRDAVLKLWDIDKAMADE 475
S D S++ WDL GH + + I YS +G D +LW D+
Sbjct: 361 SEDMSIRYWDLGSFTNTVLYQGHAYPVWDLDISPYSLYFASGSHDRTARLWSFDRTYP-- 418
Query: 476 ASNSSEDNDACLYTFDSHVDEITAISF--DGDNLVSGSQDRTVRQWDLNSGKCTQTIDIS 533
L + H+ ++ + F + + L +GS D+TVR W G +
Sbjct: 419 -----------LRIYAGHLADVDCVKFHPNSNYLATGSTDKTVRLWSAQQGN-----SVR 462
Query: 534 FATGPMRSQRNIPLRNSVLLTKEPPAIGALQCFDAALATGTKDGIVRLWDLRSGKVVRML 593
TG R VL P LA+ +D ++LWDL SG + + L
Sbjct: 463 LFTGH---------RGPVLSLAFSPN-------GKYLASAGEDQRLKLWDLASGTLYKEL 506
Query: 594 EGHTDAITSLQF--DSVNLVTGAMDRSIRIWDLR 625
GHTD ITSL F DS + + +MD S+R+WD+R
Sbjct: 507 RGHTDNITSLTFSPDSGLIASASMDNSVRVWDIR 540
Score = 65.5 bits (158), Expect = 3e-10
Identities = 61/250 (24%), Positives = 107/250 (42%), Gaps = 52/250 (20%)
Query: 381 QFYDSGSKI-TSLPKAHDEDITCLDFDMPFGTMCSAGSLDHSVKVWDLSKKKQIATLHGH 439
+++D GS T L + H + LD P+ ++GS D + ++W + + GH
Sbjct: 367 RYWDLGSFTNTVLYQGHAYPVWDLDIS-PYSLYFASGSHDRTARLWSFDRTYPLRIYAGH 425
Query: 440 LASISCMQIDQYST-LITGGRDAVLKLWDIDKAMADEASNSSEDNDACLYTFDSHVDEIT 498
LA + C++ S L TG D ++LW ++ + N L+T H +
Sbjct: 426 LADVDCVKFHPNSNYLATGSTDKTVRLW-----------SAQQGNSVRLFT--GHRGPVL 472
Query: 499 AISF--DGDNLVSGSQDRTVRQWDLNSGKCTQTIDISFATGPMRSQRNIPLRNSVLLTKE 556
+++F +G L S +D+ ++ WDL A+G + + N LT
Sbjct: 473 SLAFSPNGKYLASAGEDQRLKLWDL-------------ASGTLYKELRGHTDNITSLTFS 519
Query: 557 PPAIGALQCFDAALATGTKDGIVRLWDLR-----------SGKVVRMLEGHTDAITSLQF 605
P + +A+ + D VR+WD+R S ++V + G + S+QF
Sbjct: 520 PDS--------GLIASASMDNSVRVWDIRNTYCSAPADGSSSELVGVYTGQMSNVLSVQF 571
Query: 606 DSVN--LVTG 613
+ N LVTG
Sbjct: 572 MACNLLLVTG 581
Score = 61.6 bits (148), Expect = 4e-09
Identities = 71/274 (25%), Positives = 112/274 (39%), Gaps = 52/274 (18%)
Query: 408 PFGTMCSAGSLDHSVKVWDLSKKKQIATLHGHLASISCMQIDQYSTLITGGRDAVLKLWD 467
P + +AG + +K+W L KK + H Q+D + D
Sbjct: 278 PDSKLLAAGFDNSCIKLWSLRSKKLKSEPH---------QVDV---------SRIHLACD 319
Query: 468 IDKAMADEASNSSEDNDACLYTFDSHVDEITAISF--DGDNLVSGSQDRTVRQWDLNSGK 525
I + DE N+ + + H + + F D L+S S+D ++R WDL G
Sbjct: 320 ILEEEDDEDDNAGTE----MKILRGHCGPVYSTRFLADSSGLLSCSEDMSIRYWDL--GS 373
Query: 526 CTQTI------------DIS-----FATGPM-RSQRNIPLRNSVLLTKEPPAIGALQCF- 566
T T+ DIS FA+G R+ R + L + + C
Sbjct: 374 FTNTVLYQGHAYPVWDLDISPYSLYFASGSHDRTARLWSFDRTYPLRIYAGHLADVDCVK 433
Query: 567 ----DAALATGTKDGIVRLWDLRSGKVVRMLEGHTDAITSLQF--DSVNLVTGAMDRSIR 620
LATG+ D VRLW + G VR+ GH + SL F + L + D+ ++
Sbjct: 434 FHPNSNYLATGSTDKTVRLWSAQQGNSVRLFTGHRGPVLSLAFSPNGKYLASAGEDQRLK 493
Query: 621 IWDLRTGIL-SDVFAYEQPITSLHFDLDKIVISN 653
+WDL +G L ++ + ITSL F D +I++
Sbjct: 494 LWDLASGTLYKELRGHTDNITSLTFSPDSGLIAS 527
>Hs16554627 [R] KOG0266 WD40 repeat-containing protein
Length = 334
Score = 83.2 bits (204), Expect = 1e-15
Identities = 63/253 (24%), Positives = 116/253 (44%), Gaps = 40/253 (15%)
Query: 378 TLQQFYDSGSKITSLPKAHDEDITCLDFDMPFGTMCSAGSLDHSVKVWDLSKKKQIATLH 437
TL+ + S K K H + C +F+ P + +GS D SV++WD+ K + TL
Sbjct: 110 TLKIWDVSSGKCLKTLKGHSNYVFCCNFN-PQSNLIVSGSFDESVRIWDVKTGKCLKTLP 168
Query: 438 GHLASISCMQIDQYSTLITGGR-DAVLKLWDIDKAMADEASNSSEDNDACLYTF-DSHVD 495
H +S + ++ +LI D + ++WD CL T D
Sbjct: 169 AHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQ-------------CLKTLIDDDNP 215
Query: 496 EITAISF--DGDNLVSGSQDRTVRQWDLNSGKCTQTIDISFATGPMRSQRNIPLRNSVLL 553
++ + F +G +++ + D T++ WD + GKC +T TG + I SV
Sbjct: 216 PVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTY-----TGHKNEKYCIFANFSVTG 270
Query: 554 TKEPPAIGALQCFDAALATGTKDGIVRLWDLRSGKVVRMLEGHTDAITSLQ-FDSVNLVT 612
K + +G++D +V +W+L++ ++V+ L+GHTD + S + N++
Sbjct: 271 GKW-------------IVSGSEDNLVYIWNLQTKEIVQKLQGHTDVVISTACHPTENIIA 317
Query: 613 GAM---DRSIRIW 622
A D++I++W
Sbjct: 318 SAALENDKTIKLW 330
Score = 75.1 bits (183), Expect = 3e-13
Identities = 57/235 (24%), Positives = 110/235 (46%), Gaps = 41/235 (17%)
Query: 483 NDACLYTFDSHVDEITAISF--DGDNLVSGSQDRTVRQWDLNSGKCTQTID---ISFATG 537
N A +T H ++++ F +G+ L S S D+ ++ W GK +TI + +
Sbjct: 34 NYALKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDV 93
Query: 538 PMRSQRNIPLRNSVLLTKEPPAIGALQCFDAALATGTKDGIVRLWDLRSGKVVRMLEGHT 597
S N+ L + + D +++WD+ SGK ++ L+GH+
Sbjct: 94 AWSSDSNL------------------------LVSASDDKTLKIWDVSSGKCLKTLKGHS 129
Query: 598 DAITSLQFD--SVNLVTGAMDRSIRIWDLRTG-ILSDVFAYEQPITSLHFDLD--KIVIS 652
+ + F+ S +V+G+ D S+RIWD++TG L + A+ P++++HF+ D IV S
Sbjct: 130 NYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSS 189
Query: 653 NNEPTVKIYNRKDGN--HWFCGEDDPEQGNVDFVRYKHG--YLVEGRSNGDINTW 703
+ + +I++ G +D+P V FV++ Y++ + + W
Sbjct: 190 SYDGLCRIWDTASGQCLKTLIDDDNPP---VSFVKFSPNGKYILAATLDNTLKLW 241
Score = 73.9 bits (180), Expect = 8e-13
Identities = 54/238 (22%), Positives = 106/238 (43%), Gaps = 41/238 (17%)
Query: 396 HDEDITCLDFDMPFGTMCSAGSLDHSVKVWDLSKKKQIATLHGHLASISCMQIDQYST-L 454
H + ++ + F P G ++ S D +K+W K T+ GH IS + S L
Sbjct: 44 HTKAVSSVKFS-PNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSNLL 102
Query: 455 ITGGRDAVLKLWDIDKAMADEASNSSEDNDACLYTFDSHVDEITAISFDGDN--LVSGSQ 512
++ D LK+WD+ + CL T H + + +F+ + +VSGS
Sbjct: 103 VSASDDKTLKIWDV-------------SSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSF 149
Query: 513 DRTVRQWDLNSGKCTQTIDISFATGPMRSQRNIPLRNSVLLTKEPPAIGALQCFDAALAT 572
D +VR WD+ +GKC +T+ P S +P + + + +
Sbjct: 150 DESVRIWDVKTGKCLKTL-------PAHS--------------DPVSAVHFNRDGSLIVS 188
Query: 573 GTKDGIVRLWDLRSGKVVR-MLEGHTDAITSLQF--DSVNLVTGAMDRSIRIWDLRTG 627
+ DG+ R+WD SG+ ++ +++ ++ ++F + ++ +D ++++WD G
Sbjct: 189 SSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKG 246
>YIL046w [R] KOG0274 Cdc4 and related F-box and WD-40 proteins
Length = 640
Score = 82.8 bits (203), Expect = 2e-15
Identities = 60/265 (22%), Positives = 111/265 (41%), Gaps = 56/265 (21%)
Query: 396 HDEDITCLDFDMPFGTMCSAGSLDHSVKVWDLSKKKQIATLHGHLASISCMQIDQYS-TL 454
H + + L FD GSLD +++VW+ + I+T GH S S + +D Y +
Sbjct: 341 HSDGVKTLYFD---DRKLITGSLDKTIRVWNYITGECISTYRGH--SDSVLSVDSYQKVI 395
Query: 455 ITGGRDAVLKLWDIDKAMADEASNSSEDNDACLYTFDSHVDEITAISFDGDNL--VSGSQ 512
++G D +K+W ++ YT H + + + + S S
Sbjct: 396 VSGSADKTVKVWHVESRTC--------------YTLRGHTEWVNCVKLHPKSFSCFSCSD 441
Query: 513 DRTVRQWDLNSGKCTQTIDISFATGPMRSQRNIPL--RNSVLLTKEPPAIGALQCFDAAL 570
D T+R WD+ + C + F + Q+ IPL ++ L + + G+ D +
Sbjct: 442 DTTIRMWDIRTNSCLKV----FRGHVGQVQKIIPLTIKDVENLATDNTSDGSSPQDDPTM 497
Query: 571 ATGTK----------------------------DGIVRLWDLRSGKVVRMLEGHTDAITS 602
G D ++LWD+++GK +R GH + +
Sbjct: 498 TDGADESDTPSNEQETVLDENIPYPTHLLSCGLDNTIKLWDVKTGKCIRTQFGHVEGVWD 557
Query: 603 LQFDSVNLVTGAMDRSIRIWDLRTG 627
+ D+ +++G+ D SI++WDL++G
Sbjct: 558 IAADNFRIISGSHDGSIKVWDLQSG 582
Score = 71.6 bits (174), Expect = 4e-12
Identities = 67/331 (20%), Positives = 126/331 (37%), Gaps = 91/331 (27%)
Query: 394 KAHDEDITCLDFDMPFGTMCSAGSLDHSVKVWDLSKKKQIATLHGHLASISCMQIDQYST 453
K H + + L F+ + GS D ++ +WDL K I L GH + + D
Sbjct: 299 KGHMDGVLTLQFNY---RLLFTGSYDSTIGIWDLFTGKLIRRLSGHSDGVKTLYFDD-RK 354
Query: 454 LITGGRDAVLKLWDIDKAMADEASNSSEDNDACLYTFDSHVDEITAISFDGDNLVSGSQD 513
LITG D +++W+ C+ T+ H D + ++ +VSGS D
Sbjct: 355 LITGSLDKTIRVWNY-------------ITGECISTYRGHSDSVLSVDSYQKVIVSGSAD 401
Query: 514 RTVRQWDLNSGKCTQTIDISFATGPMRSQRNIPLRNSVLLTKEPPAIGALQCFDAALATG 573
+TV+ W + S C + + N V L P + C D
Sbjct: 402 KTVKVWHVESRTC------------YTLRGHTEWVNCVKL--HPKSFSCFSCSD------ 441
Query: 574 TKDGIVRLWDLRSGKVVRMLEGHTDAI----------------------TSLQFD----- 606
D +R+WD+R+ +++ GH + +S Q D
Sbjct: 442 --DTTIRMWDIRTNSCLKVFRGHVGQVQKIIPLTIKDVENLATDNTSDGSSPQDDPTMTD 499
Query: 607 ----------------------SVNLVTGAMDRSIRIWDLRTG-ILSDVFAYEQPITSLH 643
+L++ +D +I++WD++TG + F + + + +
Sbjct: 500 GADESDTPSNEQETVLDENIPYPTHLLSCGLDNTIKLWDVKTGKCIRTQFGHVEGVWDIA 559
Query: 644 FDLDKIVISNNEPTVKIYNRKDGN--HWFCG 672
D +I+ +++ ++K+++ + G H F G
Sbjct: 560 ADNFRIISGSHDGSIKVWDLQSGKCMHTFNG 590
Score = 70.1 bits (170), Expect = 1e-11
Identities = 33/94 (35%), Positives = 58/94 (61%), Gaps = 1/94 (1%)
Query: 570 LATGTKDGIVRLWDLRSGKVVRMLEGHTDAITSLQFDSVNLVTGAMDRSIRIWDLRTG-I 628
L TG+ D + +WDL +GK++R L GH+D + +L FD L+TG++D++IR+W+ TG
Sbjct: 315 LFTGSYDSTIGIWDLFTGKLIRRLSGHSDGVKTLYFDDRKLITGSLDKTIRVWNYITGEC 374
Query: 629 LSDVFAYEQPITSLHFDLDKIVISNNEPTVKIYN 662
+S + + S+ IV + + TVK+++
Sbjct: 375 ISTYRGHSDSVLSVDSYQKVIVSGSADKTVKVWH 408
Score = 63.9 bits (154), Expect = 8e-10
Identities = 44/204 (21%), Positives = 85/204 (41%), Gaps = 40/204 (19%)
Query: 432 QIATLHGHLASISCMQIDQYSTLITGGRDAVLKLWDIDKAMADEASNSSEDNDACLYTFD 491
+I GH+ + +Q + Y L TG D+ + +WD+ +
Sbjct: 294 RIQEFKGHMDGVLTLQFN-YRLLFTGSYDSTIGIWDLFTGKL-------------IRRLS 339
Query: 492 SHVDEITAISFDGDNLVSGSQDRTVRQWDLNSGKCTQTIDISFATGPMRSQRNIPLRNSV 551
H D + + FD L++GS D+T+R W+ +G+C T
Sbjct: 340 GHSDGVKTLYFDDRKLITGSLDKTIRVWNYITGECISTY--------------------- 378
Query: 552 LLTKEPPAIGALQCFDAALATGTKDGIVRLWDLRSGKVVRMLEGHTDAITSLQFD--SVN 609
++ ++ + + +G+ D V++W + S + L GHT+ + ++ S +
Sbjct: 379 --RGHSDSVLSVDSYQKVIVSGSADKTVKVWHVES-RTCYTLRGHTEWVNCVKLHPKSFS 435
Query: 610 LVTGAMDRSIRIWDLRTGILSDVF 633
+ + D +IR+WD+RT VF
Sbjct: 436 CFSCSDDTTIRMWDIRTNSCLKVF 459
Score = 51.6 bits (122), Expect = 4e-06
Identities = 32/121 (26%), Positives = 63/121 (51%), Gaps = 11/121 (9%)
Query: 590 VRMLEGHTDAITSLQFDSVNLVTGAMDRSIRIWDLRTG-ILSDVFAYEQPITSLHFDLDK 648
++ +GH D + +LQF+ L TG+ D +I IWDL TG ++ + + + +L+FD K
Sbjct: 295 IQEFKGHMDGVLTLQFNYRLLFTGSYDSTIGIWDLFTGKLIRRLSGHSDGVKTLYFDDRK 354
Query: 649 IVISNNEPTVKIYNRKDGNHWFCGE-DDPEQGNVDFVRYKHGY---LVEGRSNGDINTWA 704
++ + + T++++N + GE +G+ D V Y +V G ++ + W
Sbjct: 355 LITGSLDKTIRVWN------YITGECISTYRGHSDSVLSVDSYQKVIVSGSADKTVKVWH 408
Query: 705 I 705
+
Sbjct: 409 V 409
Score = 50.8 bits (120), Expect = 7e-06
Identities = 34/129 (26%), Positives = 57/129 (43%), Gaps = 19/129 (14%)
Query: 454 LITGGRDAVLKLWDIDKAMADEASNSSEDNDACLYTFDSHVDEITAISFDGDNLVSGSQD 513
L++ G D +KLWD+ C+ T HV+ + I+ D ++SGS D
Sbjct: 525 LLSCGLDNTIKLWDVKTGK-------------CIRTQFGHVEGVWDIAADNFRIISGSHD 571
Query: 514 RTVRQWDLNSGKCTQTIDISFATGPMRSQRNIPLRNSVLLTKEPPAIGALQCFDAALATG 573
+++ WDL SGKC T + R QR + L + I + D+ +G
Sbjct: 572 GSIKVWDLQSGKCMHTFN------GRRLQRETQHTQTQSLGDKVAPIACVCIGDSECFSG 625
Query: 574 TKDGIVRLW 582
+ G V+++
Sbjct: 626 DEFGCVKMY 634
>At4g15900 [A] KOG0285 Pleiotropic regulator 1
Length = 486
Score = 82.0 bits (201), Expect = 3e-15
Identities = 73/258 (28%), Positives = 113/258 (43%), Gaps = 43/258 (16%)
Query: 396 HDEDITCLDFDMPFGTMCSAGSLDHSVKVWDLSKKKQIATLHGHLASISCMQI-DQYSTL 454
H E + L M SAG D VK WDL + K I + HGHL+ + C+ + L
Sbjct: 217 HIEQVRGLAVSNRHTYMFSAGD-DKQVKCWDLEQNKVIRSYHGHLSGVYCLALHPTLDVL 275
Query: 455 ITGGRDAVLKLWDIDKAMADEASNSSEDNDACLYTFDSHVDEITAISFDGDNLVSGSQDR 514
+TGGRD+V ++WDI M A S DN C F D +V+GS D
Sbjct: 276 LTGGRDSVCRVWDIRTKMQIFAL-SGHDNTVC-SVFTRPTD---------PQVVTGSHDT 324
Query: 515 TVRQWDLNSGKCTQTI---------------DISFATGPMRSQRNIPLRNSV----LLTK 555
T++ WDL GK T+ + +FA+ + + L +L++
Sbjct: 325 TIKFWDLRYGKTMSTLTHHKKSVRAMTLHPKENAFASASADNTKKFSLPKGEFCHNMLSQ 384
Query: 556 EPPAIGALQC-FDAALATGTKDGIVRLWDLRSGKVVRMLE-----GHTDA---ITSLQFD 606
+ I A+ D + TG +G + WD +SG + E G ++ I + +D
Sbjct: 385 QKTIINAMAVNEDGVMVTGGDNGSIWFWDWKSGHSFQQSETIVQPGSLESEAGIYAACYD 444
Query: 607 SV--NLVTGAMDRSIRIW 622
+ LVT D++I++W
Sbjct: 445 NTGSRLVTCEADKTIKMW 462
Score = 60.5 bits (145), Expect = 9e-09
Identities = 58/282 (20%), Positives = 112/282 (39%), Gaps = 45/282 (15%)
Query: 431 KQIATLHGHLASISCMQIDQYST-LITGGRDAVLKLWDIDKAMADEASNSSEDNDACLYT 489
K + GHL + + D + TG D +K+WD+ + T
Sbjct: 167 KNYRVIQGHLGWVRSVAFDPSNEWFCTGSADRTIKIWDVATGVLK-------------LT 213
Query: 490 FDSHVDEITAISFDGDN--LVSGSQDRTVRQWDLNSGKCTQTIDISFATGPMRSQRNIPL 547
H++++ ++ + + S D+ V+ WDL K ++ G + + L
Sbjct: 214 LTGHIEQVRGLAVSNRHTYMFSAGDDKQVKCWDLEQNKVIRSYH-----GHLSGVYCLAL 268
Query: 548 RNSVLLTKEPPAIGALQCFDAALATGTKDGIVRLWDLRSGKVVRMLEGHTDAITSL--QF 605
++ L TG +D + R+WD+R+ + L GH + + S+ +
Sbjct: 269 HPTL----------------DVLLTGGRDSVCRVWDIRTKMQIFALSGHDNTVCSVFTRP 312
Query: 606 DSVNLVTGAMDRSIRIWDLRTG-ILSDVFAYEQPITSLHF-DLDKIVISNNEPTVKIYNR 663
+VTG+ D +I+ WDLR G +S + +++ + ++ + S + K ++
Sbjct: 313 TDPQVVTGSHDTTIKFWDLRYGKTMSTLTHHKKSVRAMTLHPKENAFASASADNTKKFSL 372
Query: 664 KDGNHWFCGEDDPEQGNV--DFVRYKHGYLVEGRSNGDINTW 703
G FC +Q + + G +V G NG I W
Sbjct: 373 PKGE--FCHNMLSQQKTIINAMAVNEDGVMVTGGDNGSIWFW 412
>7303694 [A] KOG0291 WD40-repeat-containing subunit of the 18S rRNA
processing complex
Length = 949
Score = 80.5 bits (197), Expect = 8e-15
Identities = 80/369 (21%), Positives = 145/369 (38%), Gaps = 80/369 (21%)
Query: 270 NNVKDRIDMIIEYNMDKEYSSEDEENINGLSELSPKXXXXXXXXXXXXXXPLENKEEEHS 329
N +D ++ ++E + KE S+++ E++N + E++ + H
Sbjct: 248 NESEDDVENVVEKDALKEESTKEAEDVNHIKN--------------------EDETKSHP 287
Query: 330 PLLSKSIYQQLQDHEKKSDISERKKHSTSKKIKDVGVSHRNRRRKTYPTLQQFYDSGSKI 389
K L D +K +DV ++ N +T + F +
Sbjct: 288 FFYKKITRHYLADEPRKEQ-------------RDVQLTAANYNTRTKVLVVAFSSGAFYL 334
Query: 390 TSLPKAH--------DEDITCLDFDMPFGTMCSAGSLDHSVKVWDLSKKKQIATLHGHLA 441
LP + D I+ F+ + A + VW+ ++ I GH +
Sbjct: 335 YELPDVNMIHSLSISDYPISAALFNCTGDWVALASREIGQLLVWEWQSEQYIMKQQGHSS 394
Query: 442 SISCMQIDQYSTLI-TGGRDAVLKLWDIDKAMADEASNSSEDNDACLYTFDSHVDEITAI 500
++C+ I TGG D+ +KLW+ + C TF H +T I
Sbjct: 395 EMTCIAYSSDGQFIATGGEDSKVKLWNTQSSF-------------CFVTFSEHTSGVTGI 441
Query: 501 SFDGDN--LVSGSQDRTVRQWDLNSGKCTQTIDISFATGPMRSQRNIPLRNSVLLTKEPP 558
F + LVS S D TVR +D+N + +T T P +Q + +V + E
Sbjct: 442 QFSRNKKFLVSSSLDGTVRAFDVNRYRNFRTF-----TSPNPAQFSCV---AVDYSGELV 493
Query: 559 AIGALQCFDAALATGTKDGIVRLWDLRSGKVVRMLEGHTDAITSLQFDSV----NLVTGA 614
G FD + LW +++GK++ ++ GH + S+ F V LV+G+
Sbjct: 494 VAGGQDVFD-----------IFLWSVKTGKLLEIISGHEGPVVSIAFSPVATSSTLVSGS 542
Query: 615 MDRSIRIWD 623
D++++IW+
Sbjct: 543 WDKTVKIWN 551
>SPBC354.03 [R] KOG0266 WD40 repeat-containing protein
Length = 380
Score = 79.0 bits (193), Expect = 2e-14
Identities = 64/244 (26%), Positives = 111/244 (45%), Gaps = 41/244 (16%)
Query: 396 HDEDITCLDFDMPFGTMCSAGSLDHSVKVWDLSKKKQIATLHGHLASISCMQIDQYST-L 454
H++ +TC+ P + S D ++K+W + TL GH IS ++ S L
Sbjct: 53 HEKSVTCVSVS-PNKRWIATSSSDGTIKIWSALTFRLECTLFGHYRGISQVKWATGSKYL 111
Query: 455 ITGGRDAVLKLWDIDKAMADEASNSSEDNDACLYTFDSHVDEITAISFD--GDNLVSGSQ 512
+ D +++WD +K + CL H + +++I F+ G LVSGS
Sbjct: 112 ASASDDKTIRIWDFEKRCSVR----------CL---KGHTNYVSSIDFNPLGTLLVSGSW 158
Query: 513 DRTVRQWDLNSGKCTQTIDISFATGPMRSQRNIPLRNSVLLTKEPPAIGALQCFDAALAT 572
D TVR W+L G C R +P + +++ A G L AT
Sbjct: 159 DETVRIWNLQDGTCL---------------RMLPAHSEPIISVSISADGTL------CAT 197
Query: 573 GTKDGIVRLWDLRSGKVVR-MLEGHTDAITSLQF--DSVNLVTGAMDRSIRIWDLRTGIL 629
+ DG+ R+WD+ SG+ ++ ++E +++LQF + L+ ++ IR+WD R +
Sbjct: 198 ASYDGMARIWDVLSGQCLKTLVEPINVPLSNLQFTENRKYLLVSNLNSQIRLWDYRRNRV 257
Query: 630 SDVF 633
+F
Sbjct: 258 VRIF 261
Score = 69.3 bits (168), Expect = 2e-11
Identities = 48/196 (24%), Positives = 85/196 (42%), Gaps = 36/196 (18%)
Query: 414 SAGSLDHSVKVWDLSKKKQIATLHGHLASISCMQIDQYST-LITGGRDAVLKLWDIDKAM 472
++ S D ++++WD K+ + L GH +S + + T L++G D +++W++
Sbjct: 112 ASASDDKTIRIWDFEKRCSVRCLKGHTNYVSSIDFNPLGTLLVSGSWDETVRIWNL---- 167
Query: 473 ADEASNSSEDNDACLYTFDSHVDEI--TAISFDGDNLVSGSQDRTVRQWDLNSGKCTQTI 530
+ CL +H + I +IS DG + S D R WD+ SG+C +T+
Sbjct: 168 ---------QDGTCLRMLPAHSEPIISVSISADGTLCATASYDGMARIWDVLSGQCLKTL 218
Query: 531 DISFATGPMRSQRNIPLRNSVLLTKEPPAIGALQCFDAALATGTKDGIVRLWDLRSGKVV 590
P+ N+PL N L + +RLWD R +VV
Sbjct: 219 -----VEPI----NVPLSNLQFTENR-----------KYLLVSNLNSQIRLWDYRRNRVV 258
Query: 591 RMLEGHTDAITSLQFD 606
R+ + H + S+ +D
Sbjct: 259 RIFDSHVNTRYSMSWD 274
Score = 56.2 bits (134), Expect = 2e-07
Identities = 29/81 (35%), Positives = 50/81 (60%), Gaps = 3/81 (3%)
Query: 570 LATGTKDGIVRLWDLRSGKVVRMLEGHTDAITSLQFDSVN--LVTGAMDRSIRIWDLRTG 627
LA+ + D +R+WD VR L+GHT+ ++S+ F+ + LV+G+ D ++RIW+L+ G
Sbjct: 111 LASASDDKTIRIWDFEKRCSVRCLKGHTNYVSSIDFNPLGTLLVSGSWDETVRIWNLQDG 170
Query: 628 -ILSDVFAYEQPITSLHFDLD 647
L + A+ +PI S+ D
Sbjct: 171 TCLRMLPAHSEPIISVSISAD 191
Score = 53.5 bits (127), Expect = 1e-06
Identities = 53/244 (21%), Positives = 99/244 (39%), Gaps = 29/244 (11%)
Query: 394 KAHDEDITCLDFDMPFGTMCSAGSLDHSVKVWDLSKKKQIATLHGHLASISCMQIDQYST 453
K H ++ +DF+ P GT+ +GS D +V++W+L + L H I + I T
Sbjct: 135 KGHTNYVSSIDFN-PLGTLLVSGSWDETVRIWNLQDGTCLRMLPAHSEPIISVSISADGT 193
Query: 454 L-ITGGRDAVLKLWDIDKAMADEASNSSEDNDACLYTFDSHVD-EITAISFDGDN--LVS 509
L T D + ++WD+ CL T ++ ++ + F + L+
Sbjct: 194 LCATASYDGMARIWDVLSGQ-------------CLKTLVEPINVPLSNLQFTENRKYLLV 240
Query: 510 GSQDRTVRQWDLNSGKCTQTIDISFAT-----GPMRSQRNIPLRNSVLLTKEPPAIGALQ 564
+ + +R WD + + D T S +NIP L + +
Sbjct: 241 SNLNSQIRLWDYRRNRVVRIFDSHVNTRYSMSWDCYSSKNIPKNTEALPNNDSSYPDDAE 300
Query: 565 CF--DAALATGTKDGIVRLWDLRSGKVVRMLEGHTD--AITSLQFDSVN--LVTGAMDRS 618
F DA L ++DG +++ D + ++ H+D + L S+ ++T D
Sbjct: 301 SFMHDAYLLIPSEDGTIQITDPSTKIIIDDSIRHSDDPETSLLNVTSLGPFIITSGTDPY 360
Query: 619 IRIW 622
+R+W
Sbjct: 361 VRVW 364
>At2g43770 [A] KOG0265 U5 snRNP-specific protein-like factor and related
proteins
Length = 343
Score = 78.6 bits (192), Expect = 3e-14
Identities = 66/224 (29%), Positives = 99/224 (43%), Gaps = 38/224 (16%)
Query: 428 SKKKQIATLHGHLASISCMQIDQYSTLI-TGGRDAVLKLWDIDKAMADEASNSSEDNDAC 486
S + I L GH +++ M+ + TLI +G D + LW + + N
Sbjct: 41 SLEAPIMLLSGHPSAVYTMKFNPAGTLIASGSHDREIFLWRVH----GDCKN-------- 88
Query: 487 LYTFDSHVDEITAISF--DGDNLVSGSQDRTVRQWDLNSGKCTQTI--DISFATGPMRSQ 542
H + I + + DG +VS S D+TVR WD+ +GK + + SF ++
Sbjct: 89 FMVLKGHKNAILDLHWTSDGSQIVSASPDKTVRAWDVETGKQIKKMAEHSSFVNSCCPTR 148
Query: 543 RNIPL-----------------RNSVLLTKEPPAIGALQCFDAA--LATGTKDGIVRLWD 583
R PL R ++ + I A+ DAA + TG D V++WD
Sbjct: 149 RGPPLIISGSDDGTAKLWDMRQRGAIQTFPDKYQITAVSFSDAADKIFTGGVDNDVKVWD 208
Query: 584 LRSGKVVRMLEGHTDAIT--SLQFDSVNLVTGAMDRSIRIWDLR 625
LR G+ LEGH D IT SL D L+T MD + +WD+R
Sbjct: 209 LRKGEATMTLEGHQDTITGMSLSPDGSYLLTNGMDNKLCVWDMR 252
Score = 61.2 bits (147), Expect = 5e-09
Identities = 56/228 (24%), Positives = 88/228 (38%), Gaps = 49/228 (21%)
Query: 410 GTMCSAGSLDHSVKVWDLSKKKQIATL--HGHLASISCMQIDQYSTLITGGRDAVLKLWD 467
G+ + S D +V+ WD+ KQI + H + C +I+G D KLWD
Sbjct: 108 GSQIVSASPDKTVRAWDVETGKQIKKMAEHSSFVNSCCPTRRGPPLIISGSDDGTAKLWD 167
Query: 468 IDKAMADEASNSSEDNDACLYTFDSHVDEITAISFD--GDNLVSGSQDRTVRQWDLNSGK 525
+ + A + TF +ITA+SF D + +G D V+ WDL G+
Sbjct: 168 MRQRGA-------------IQTFPDKY-QITAVSFSDAADKIFTGGVDNDVKVWDLRKGE 213
Query: 526 CTQTIDISFATGPMRSQRNIPLRNSVLLTKEPPAIGALQCFDAALATGTKDGIVRLWDLR 585
T T++ G + + L + L T D + +WD+R
Sbjct: 214 ATMTLE-----GHQDTITGMSLSPD----------------GSYLLTNGMDNKLCVWDMR 252
Query: 586 ----SGKVVRMLEGHTDAI------TSLQFDSVNLVTGAMDRSIRIWD 623
+ V++ EGH S D + G+ DR + IWD
Sbjct: 253 PYAPQNRCVKIFEGHQHNFEKNLLKCSWSPDGTKVTAGSSDRMVHIWD 300
Score = 58.9 bits (141), Expect = 3e-08
Identities = 48/214 (22%), Positives = 82/214 (37%), Gaps = 36/214 (16%)
Query: 415 AGSLDHSVKVWDLSKKKQIATLHGHLASISCMQIDQYSTLITGGRDAVLKLWDIDKAMAD 474
+GS D + K+WD+ ++ I T + D + TGG D +K+WD+ K A
Sbjct: 156 SGSDDGTAKLWDMRQRGAIQTFPDKYQITAVSFSDAADKIFTGGVDNDVKVWDLRKGEA- 214
Query: 475 EASNSSEDNDACLYTFDSHVDEITAISF--DGDNLVSGSQDRTVRQWDLN----SGKCTQ 528
T + H D IT +S DG L++ D + WD+ +C +
Sbjct: 215 ------------TMTLEGHQDTITGMSLSPDGSYLLTNGMDNKLCVWDMRPYAPQNRCVK 262
Query: 529 TIDISFATGPMRSQRNIPLRNSVLLTKEPPAIGALQCFDAALATGTKDGIVRLWDLRSGK 588
+ Q N +N + + P + G+ D +V +WD S +
Sbjct: 263 IFE--------GHQHNFE-KNLLKCSWSPDG--------TKVTAGSSDRMVHIWDTTSRR 305
Query: 589 VVRMLEGHTDAITSLQFDSVNLVTGAMDRSIRIW 622
+ L GHT ++ F + G+ I+
Sbjct: 306 TIYKLPGHTGSVNECVFHPTEPIIGSCSSDKNIY 339
>Hs21071065 [K] KOG0263 Transcription initiation factor TFIID subunit TAF5
(also component of histone acetyltransferase SAGA)
Length = 745
Score = 78.2 bits (191), Expect = 4e-14
Identities = 66/223 (29%), Positives = 102/223 (45%), Gaps = 31/223 (13%)
Query: 411 TMCSAGSLDHSVKVWDLSKKKQIATLHGHLASISCMQIDQYSTLITGGRDAV-LKLWDID 469
++ + G D +V+VW ++ KK + S+ + D I + A LK+
Sbjct: 483 SLIAGGFADSTVRVWSVTPKKLRSVKQASDLSLIDKESDDVLERIMDEKTASELKILYGH 542
Query: 470 KAMADEASNSSE-----DNDACLYTFDSHVDEITAISF--DGDNLVSGSQDRTVRQWDLN 522
AS S + D+ L F H+ ++ F + + + +GS DRTVR WD+
Sbjct: 543 SGPVYGASFSPDRLWATDHYQPLRIFAGHLADVNCTRFHPNSNYVATGSADRTVRLWDVL 602
Query: 523 SGKCTQTIDISFATGPMRSQRNIPLRNSVLLTKEPPAIGALQCFDAALATGTKDGIVRLW 582
+G C + + GP+ S LT P LATG DG V LW
Sbjct: 603 NGNCVRIF--TGHKGPIHS-----------LTFSPNG--------RFLATGATDGRVLLW 641
Query: 583 DLRSGKVVRMLEGHTDAITSLQF--DSVNLVTGAMDRSIRIWD 623
D+ G +V L+GHTD + SL+F D L +G+MD ++R+WD
Sbjct: 642 DIGHGLMVGELKGHTDTVCSLRFSRDGEILASGSMDNTVRLWD 684
Score = 60.5 bits (145), Expect = 9e-09
Identities = 47/170 (27%), Positives = 70/170 (40%), Gaps = 19/170 (11%)
Query: 396 HDEDITCLDFDMPFGTMCSAGSLDHSVKVWDLSKKKQIATLHGHLASISCMQIDQYST-L 454
H D+ C F P + GS D +V++WD+ + GH I + L
Sbjct: 571 HLADVNCTRFH-PNSNYVATGSADRTVRLWDVLNGNCVRIFTGHKGPIHSLTFSPNGRFL 629
Query: 455 ITGGRDAVLKLWDIDKAMADEASNSSEDNDACLYTFDSHVDEITAISF--DGDNLVSGSQ 512
TG D + LWDI + + H D + ++ F DG+ L SGS
Sbjct: 630 ATGATDGRVLLWDIGHGL-------------MVGELKGHTDTVCSLRFSRDGEILASGSM 676
Query: 513 DRTVRQWD-LNSGKCTQTIDISFATGPMRSQRNI-PLRNSVLLTKEPPAI 560
D TVR WD + + + +T D + ATG + N L +TK P +
Sbjct: 677 DNTVRLWDAIKAFEDLETDDFTTATGHINLPENSQELLLGTYMTKSTPVV 726
>SPBP22H7.07 [A] KOG0285 Pleiotropic regulator 1
Length = 473
Score = 77.8 bits (190), Expect = 5e-14
Identities = 61/259 (23%), Positives = 114/259 (43%), Gaps = 42/259 (16%)
Query: 400 ITCLDFDMPFGTMCSAGSLDHSVKVWDLSKKKQIATLHGHLASISCMQID-QYSTLITGG 458
+ C+D + C+ G+ D ++K+WDL+ TL GH+A++ + + ++ L + G
Sbjct: 166 VRCVDVEPGNQWFCT-GAGDRTIKIWDLASGVLKLTLTGHIATVRGLAVSPRHPYLFSCG 224
Query: 459 RDAVLKLWDIDKAMADEASNSSEDNDACLYTFDSHVDEITAISFDG--DNLVSGSQDRTV 516
D ++K WD++ + + + H+ + A+ D LV+ +D
Sbjct: 225 EDKMVKCWDLE-------------TNKVIRHYHGHLSGVYALKLHPTLDVLVTAGRDAVA 271
Query: 517 RQWDLNSGKCTQTIDISFATGPMRSQRNIPLRNSVLLTKEPPAIGALQCFDAALATGTKD 576
R WD MR+++N+ + + K A A+Q FD + TG+ D
Sbjct: 272 RVWD------------------MRTRQNVHVLSG---HKSTVASLAVQEFDPQVVTGSMD 310
Query: 577 GIVRLWDLRSGKVVRMLEGHTDAITSLQF--DSVNLVTGAMDRSIRIWDLRTGILSDVF- 633
+RLWDL +GK + L H + +L D +G+ D +I+ W G F
Sbjct: 311 STIRLWDLAAGKTLTTLTHHKKTVRALSLHPDEFTFASGSSD-NIKHWKFPEGAFMGNFE 369
Query: 634 AYEQPITSLHFDLDKIVIS 652
+ + +L + D ++ S
Sbjct: 370 GHNAIVNTLSINSDNVMFS 388
>CE00901 [R] KOG0266 WD40 repeat-containing protein
Length = 376
Score = 77.8 bits (190), Expect = 5e-14
Identities = 64/253 (25%), Positives = 117/253 (45%), Gaps = 40/253 (15%)
Query: 378 TLQQFYDSGSKITSLPKAHDEDITCLDFDMPFGTMCSAGSLDHSVKVWDLSKKKQIATLH 437
TL+ F S++T K H+ + C +F+ P ++ +GS D SV++WD+ I TL
Sbjct: 152 TLKIFEIVTSRMTKTLKGHNNYVFCCNFN-PQSSLVVSGSFDESVRIWDVKTGMCIKTLP 210
Query: 438 GHLASISCMQIDQYSTLI-TGGRDAVLKLWDIDKAMADEASNSSEDNDACLYTF-DSHVD 495
H +S + ++ +LI +G D ++++WD N C+ T D
Sbjct: 211 AHSDPVSAVSFNRDGSLIASGSYDGLVRIWD-------------TANGQCIKTLVDDENP 257
Query: 496 EITAISF--DGDNLVSGSQDRTVRQWDLNSGKCTQTIDISFATGPMRSQRNIPLRNSVLL 553
+ + F +G +++ + D T++ WD + GK + TG S+ I SV
Sbjct: 258 PVAFVKFSPNGKYILASNLDSTLKLWDFSKGKTLKQY-----TGHENSKYCIFANFSVTG 312
Query: 554 TKEPPAIGALQCFDAALATGTKDGIVRLWDLRSGKVVRMLEGHTDAITSLQFDSVN--LV 611
K + +G++D + +W+L++ ++V+ LEGHT + + V +
Sbjct: 313 GK-------------WIISGSEDCKIYIWNLQTREIVQCLEGHTQPVLASDCHPVQNIIA 359
Query: 612 TGAM--DRSIRIW 622
+GA+ D I IW
Sbjct: 360 SGALEPDNKIHIW 372
Score = 68.9 bits (167), Expect = 2e-11
Identities = 71/327 (21%), Positives = 126/327 (37%), Gaps = 87/327 (26%)
Query: 388 KITSLPKAHDEDITCLDFDMPFGTMCSAGSLDHSVKVWDLS------------------- 428
K+ + H + I+ F P G S D +VK+W++
Sbjct: 78 KLMCTLEGHTKSISSAKFS-PCGKYLGTSSADKTVKIWNMDHMICERTLTGHKLGVNDIA 136
Query: 429 -----------------------KKKQIATLHGHLASISCMQIDQYSTLITGGR-DAVLK 464
+ TL GH + C + S+L+ G D ++
Sbjct: 137 WSSDSRCVVSASDDKTLKIFEIVTSRMTKTLKGHNNYVFCCNFNPQSSLVVSGSFDESVR 196
Query: 465 LWDIDKAMADEASNSSEDNDACLYTFDSHVDEITAISF--DGDNLVSGSQDRTVRQWDLN 522
+WD+ M C+ T +H D ++A+SF DG + SGS D VR WD
Sbjct: 197 IWDVKTGM-------------CIKTLPAHSDPVSAVSFNRDGSLIASGSYDGLVRIWDTA 243
Query: 523 SGKCTQTIDISFATGPMRSQRNIPLRNSVLLTKEPPAIGALQCFDAALATGTKDGIVRLW 582
+G+C +T+ + P+ + P +L D ++LW
Sbjct: 244 NGQCIKTL-VDDENPPVAFVKFSPNGKYIL-------------------ASNLDSTLKLW 283
Query: 583 DLRSGKVVRMLEGHTDAITSLQFD-SVN----LVTGAMDRSIRIWDLRT-GILSDVFAYE 636
D GK ++ GH ++ + + SV +++G+ D I IW+L+T I+ + +
Sbjct: 284 DFSKGKTLKQYTGHENSKYCIFANFSVTGGKWIISGSEDCKIYIWNLQTREIVQCLEGHT 343
Query: 637 QPITSLHFDLDKIVISNN--EPTVKIY 661
QP+ + + +I++ EP KI+
Sbjct: 344 QPVLASDCHPVQNIIASGALEPDNKIH 370
Score = 63.9 bits (154), Expect = 8e-10
Identities = 53/237 (22%), Positives = 112/237 (46%), Gaps = 31/237 (13%)
Query: 476 ASNSSEDNDACLYTFDSHVDEITAISFD--GDNLVSGSQDRTVRQWDLNSGKCTQTIDIS 533
AS S N + T + H I++ F G L + S D+TV+ W+++ C +T+
Sbjct: 69 ASASGSANYKLMCTLEGHTKSISSAKFSPCGKYLGTSSADKTVKIWNMDHMICERTL--- 125
Query: 534 FATGPMRSQRNIPLRNSVLLTKEPPAIGALQCFDAALATGTKDGIVRLWDLRSGKVVRML 593
TG +I A + + + D ++++++ + ++ + L
Sbjct: 126 --TGHKLGVNDI----------------AWSSDSRCVVSASDDKTLKIFEIVTSRMTKTL 167
Query: 594 EGHTDAITSLQFD--SVNLVTGAMDRSIRIWDLRTGI-LSDVFAYEQPITSLHFDLDKIV 650
+GH + + F+ S +V+G+ D S+RIWD++TG+ + + A+ P++++ F+ D +
Sbjct: 168 KGHNNYVFCCNFNPQSSLVVSGSFDESVRIWDVKTGMCIKTLPAHSDPVSAVSFNRDGSL 227
Query: 651 ISNN--EPTVKIYNRKDGNHWFCGEDDPEQGNVDFVRYKHG--YLVEGRSNGDINTW 703
I++ + V+I++ +G DD E V FV++ Y++ + + W
Sbjct: 228 IASGSYDGLVRIWDTANGQCIKTLVDD-ENPPVAFVKFSPNGKYILASNLDSTLKLW 283
>YCR072c [S] KOG0271 Notchless-like WD40 repeat-containing protein
Length = 515
Score = 77.0 bits (188), Expect = 9e-14
Identities = 65/272 (23%), Positives = 114/272 (41%), Gaps = 46/272 (16%)
Query: 394 KAHDEDITCLDFDMPFGTMCSAGSLDHSVKVWDLSKKKQIA-TLHGHLASISCMQIDQYS 452
K H + C+ + P G + + GS+D+++++WD + + L GH I+ + +
Sbjct: 183 KGHYNWVLCVSWS-PDGEVIATGSMDNTIRLWDPKSGQCLGDALRGHSKWITSLSWEPIH 241
Query: 453 T--------LITGGRDAVLKLWDIDKAMADEASNSSEDNDACLYTFDSHVDEITAISFDG 504
L + +D +K+WD + C YT H + ++ + + G
Sbjct: 242 LVKPGSKPRLASSSKDGTIKIWDTVSRV-------------CQYTMSGHTNSVSCVKWGG 288
Query: 505 DNLV-SGSQDRTVRQWDLNS-GKCTQTI--------DISFATGPMRSQRNIPLRNSVLLT 554
L+ SGS DRTVR WD+NS G+C + +S +T T
Sbjct: 289 QGLLYSGSHDRTVRVWDINSQGRCINILKSHAHWVNHLSLSTDYALRIGAFDHTGKKPST 348
Query: 555 KEPPAIGALQCF----------DAALATGTKDGIVRLWD-LRSGKVVRMLEGHTDAITSL 603
E AL+ + + + T + D + LW+ L+S K + + GH + +
Sbjct: 349 PEEAQKKALENYEKICKKNGNSEEMMVTASDDYTMFLWNPLKSTKPIARMTGHQKLVNHV 408
Query: 604 QF--DSVNLVTGAMDRSIRIWDLRTGILSDVF 633
F D +V+ + D SI++WD R G F
Sbjct: 409 AFSPDGRYIVSASFDNSIKLWDGRDGKFISTF 440
Score = 52.8 bits (125), Expect = 2e-06
Identities = 35/115 (30%), Positives = 52/115 (44%), Gaps = 16/115 (13%)
Query: 408 PFGTMCSAGSLDHSVKVWDLSKKKQIATLHGHLASI-SCMQIDQYSTLITGGRDAVLKLW 466
P G + S D+S+K+WD K I+T GH+AS+ L++ +D LK+W
Sbjct: 412 PDGRYIVSASFDNSIKLWDGRDGKFISTFRGHVASVYQVAWSSDCRLLVSCSKDTTLKVW 471
Query: 467 DIDKAMADEASNSSEDNDACLYTFDSHVDEITAI--SFDGDNLVSGSQDRTVRQW 519
D+ S D H DE+ + S DG + SG +D+ VR W
Sbjct: 472 DV------RTRKLSVD-------LPGHKDEVYTVDWSVDGKRVCSGGKDKMVRLW 513
>SPCC18.05c [S] KOG0271 Notchless-like WD40 repeat-containing protein
Length = 502
Score = 76.6 bits (187), Expect = 1e-13
Identities = 76/341 (22%), Positives = 135/341 (39%), Gaps = 70/341 (20%)
Query: 387 SKITSLPKAHDEDITCLDFDMPFGTMCSAGSLDHSVKVWDLSKKKQIATLHGHLASISCM 446
++ T+ HD I F + GS D + ++WD + IAT+ GH +SC+
Sbjct: 124 TRCTASMNGHDGTIISAQFSPSTSSRLVTGSGDFTARLWDCDTQTPIATMKGHTNWVSCV 183
Query: 447 Q-IDQYSTLITGGRDAVLKLWDIDKA-----------------------MADEA-----S 477
S + TG D ++ WD K +A ++ +
Sbjct: 184 AWAPDASIIATGSMDNTIRFWDPKKGSPIGDALRRHTKPIMALCWQPLHLAPDSGPYLLA 243
Query: 478 NSSEDNDA---------CLYTFDSHVDEITAISFDGDNLV-SGSQDRTVRQWDLNSGKCT 527
+ S+DN L+T H IT + + G N + S S D+T+R WD GKC
Sbjct: 244 SGSKDNTVRIWNVKLRTLLFTLSGHTAPITCVRWGGQNWIYSSSYDKTIRIWDAKDGKC- 302
Query: 528 QTIDISFATGPMRSQRNIPLRNSVLLTK--------EPPAIG-----ALQCFDAA----- 569
+ G ++ L +L +P + A + ++A
Sbjct: 303 ----LHILKGHAARVNHLSLSTEHVLRSGAYDHTDFKPKSFSDERRKAKERYEACLKQSG 358
Query: 570 --LATGTKDGIVRLWD-LRSGKVVRMLEGHTDAITSLQF--DSVNLVTGAMDRSIRIWDL 624
L + + D + LWD +S K + + GH + F D + T + D S+R+WD
Sbjct: 359 ERLVSASDDLQLILWDPQKSTKPITKMHGHQKVVNHASFSPDGRCIATASFDSSVRLWDG 418
Query: 625 RTG-ILSDVFAYEQPITSLHFDLDK--IVISNNEPTVKIYN 662
+TG L+ + + + + D +V S+ + T+K+++
Sbjct: 419 KTGKFLATLRGHVAAVYQCAWSTDSRLLVSSSQDTTLKVWD 459
Score = 58.2 bits (139), Expect = 4e-08
Identities = 35/116 (30%), Positives = 54/116 (46%), Gaps = 18/116 (15%)
Query: 408 PFGTMCSAGSLDHSVKVWDLSKKKQIATLHGHLASI-SCMQIDQYSTLITGGRDAVLKLW 466
P G + S D SV++WD K +ATL GH+A++ C L++ +D LK+W
Sbjct: 399 PDGRCIATASFDSSVRLWDGKTGKFLATLRGHVAAVYQCAWSTDSRLLVSSSQDTTLKVW 458
Query: 467 DI-DKAMADEASNSSEDNDACLYTFDSHVDEITAISF--DGDNLVSGSQDRTVRQW 519
D+ K M + H D++ A+ + DG + SG D+ VR W
Sbjct: 459 DVRSKKMK--------------FDLPGHEDQVFAVDWSPDGQRVASGGADKAVRIW 500
>SPAC227.12 [A] KOG0272 U4/U6 small nuclear ribonucleoprotein Prp4 (contains
WD40 repeats)
Length = 462
Score = 76.6 bits (187), Expect = 1e-13
Identities = 73/278 (26%), Positives = 117/278 (41%), Gaps = 65/278 (23%)
Query: 410 GTMCSAGSLDHSVKVWDLSKKKQIATLHGHLASIS-------CMQIDQYS---TLITGGR 459
G ++GS VKVW+ ++ GH +S C D S TL TG
Sbjct: 184 GNHFASGSWGGQVKVWNSDNLSEVQLFRGHTDRVSGLDWYPLCQAWDADSEQLTLATGAA 243
Query: 460 DAVLKLWDIDKAMADEASNSSEDNDACLYTFDSHVDEITAISF--DGDNLVSGSQDRTVR 517
D + LW +AS S+ L + H+ + ++F GD LVS S D T R
Sbjct: 244 DNTVCLW--------KASQSTP-----LLRLEGHLARVGRVAFHPSGDYLVSASFDTTWR 290
Query: 518 QWDLNSGKCTQTIDISFATGPMRSQRNIPLRNSVLLTKEPPAIGALQCFDAALATGTKDG 577
WD+++G +++ G +I A Q + +++G D
Sbjct: 291 LWDVHTG-----VELLMQEGHSEGIFSI----------------ACQPDGSLVSSGGNDA 329
Query: 578 IVRLWDLRSGKVVRMLEGHTDAITSLQF--DSVNLVTGAMDRSIRIWDLR---------- 625
I R+WDLRSGK + +L+ H I ++ + + L T + D +++IWDLR
Sbjct: 330 IGRIWDLRSGKSIMVLDEHIRQIVAMAWSPNGYQLATSSADDTVKIWDLRKVSLAHTIPA 389
Query: 626 -TGILSDVFAYEQPITSLHFDLDKIVISNNEPTVKIYN 662
+ ++SDV E + I S + VK++N
Sbjct: 390 HSSLVSDVRYIESGVNRF------IATSGYDGCVKLWN 421
Score = 72.8 bits (177), Expect = 2e-12
Identities = 57/256 (22%), Positives = 108/256 (41%), Gaps = 42/256 (16%)
Query: 414 SAGSLDHSVKVWDLSKKKQIATLHGHLASISCMQIDQYST-LITGGRDAVLKLWDIDKAM 472
+ G+ D++V +W S+ + L GHLA + + L++ D +LWD+ +
Sbjct: 239 ATGAADNTVCLWKASQSTPLLRLEGHLARVGRVAFHPSGDYLVSASFDTTWRLWDVHTGV 298
Query: 473 ADEASNSSEDNDACLYTFDSHVDEITAISF--DGDNLVSGSQDRTVRQWDLNSGKCTQTI 530
L + H + I +I+ DG + SG D R WDL SGK +
Sbjct: 299 E-------------LLMQEGHSEGIFSIACQPDGSLVSSGGNDAIGRIWDLRSGKSIMVL 345
Query: 531 DISFATGPMRSQRNIPLRNSVLLTKEPPAIGALQCFDAALATGTKDGIVRLWDLRSGKVV 590
D +R V + P LAT + D V++WDLR +
Sbjct: 346 DEH-------------IRQIVAMAWSPNGY--------QLATSSADDTVKIWDLRKVSLA 384
Query: 591 RMLEGHTDAITSLQF--DSVN--LVTGAMDRSIRIWD-LRTGILSDVFAYEQPITSLHFD 645
+ H+ ++ +++ VN + T D +++W+ L ++ + +E+ + S+
Sbjct: 385 HTIPAHSSLVSDVRYIESGVNRFIATSGYDGCVKLWNPLNCSLIKSMVGHEEKVMSVDGY 444
Query: 646 LDKIVISNNEPTVKIY 661
D+ + S + T+K++
Sbjct: 445 GDRFISSGYDRTIKLW 460
Score = 67.0 bits (162), Expect = 9e-11
Identities = 48/218 (22%), Positives = 93/218 (42%), Gaps = 35/218 (16%)
Query: 408 PFGTMCSAGSLDHSVKVWDLSKKKQIATLHGHLASISCMQIDQYSTLIT-GGRDAVLKLW 466
P G + S D + ++WD+ ++ GH I + +L++ GG DA+ ++W
Sbjct: 275 PSGDYLVSASFDTTWRLWDVHTGVELLMQEGHSEGIFSIACQPDGSLVSSGGNDAIGRIW 334
Query: 467 DIDKAMADEASNSSEDNDACLYTFDSHVDEITAISF--DGDNLVSGSQDRTVRQWDLNSG 524
D+ + + D H+ +I A+++ +G L + S D TV+ WDL
Sbjct: 335 DLRSGKS-------------IMVLDEHIRQIVAMAWSPNGYQLATSSADDTVKIWDLRKV 381
Query: 525 KCTQTIDISFATGPMRSQRNIPLRNSVLLTKEPPAIGALQCFDAALATGTKDGIVRLWDL 584
TI P +S++ G + +AT DG V+LW+
Sbjct: 382 SLAHTI---------------PAHSSLVSDVRYIESGV----NRFIATSGYDGCVKLWNP 422
Query: 585 RSGKVVRMLEGHTDAITSLQFDSVNLVTGAMDRSIRIW 622
+ +++ + GH + + S+ ++ DR+I++W
Sbjct: 423 LNCSLIKSMVGHEEKVMSVDGYGDRFISSGYDRTIKLW 460
>7302600 [R] KOG4155 FOG: WD40 repeat
Length = 1240
Score = 75.9 bits (185), Expect = 2e-13
Identities = 71/307 (23%), Positives = 132/307 (42%), Gaps = 61/307 (19%)
Query: 394 KAHDEDITCLDFDMPFGTMCSAGSLDHSVKVWDLSKKKQIATLHGHLASISCMQIDQYST 453
+ H ++CL F P G + GS D V +W+L+ + + GH A + + + S
Sbjct: 781 EGHTAGVSCLKF-APNGEFLATGSEDRLVHIWNLALGEICNSFKGHTAPVVKVVVLMDSL 839
Query: 454 -LITGGRDAVLKLWDIDKAMADE-----------------ASNSSEDNDACLYTFD---- 491
+I+ RD++L +W + A +++ DN +++
Sbjct: 840 RVISTDRDSMLLVWMAHSGNLLQTIQGPYKSLSVTNNMRFAVSTNGDNTLKIWSLTQEDE 899
Query: 492 ----SHVDEITA--ISFDGDNLVSGSQDRTVRQWDLNSGKCTQTIDISFATGPMRSQRNI 545
SH DEIT IS D +++SGS+D +++ W GK +Q + + + ++
Sbjct: 900 KYSVSHSDEITCFEISADSVHIISGSRDMSLKVWQATGGKLSQVL-VGHSDAVTCVAVSV 958
Query: 546 PLRNSVLLTKEPPAIGALQCFDAALATGTKDGIVRLWDLRSGKVVRMLEGHTDAITSLQF 605
+ VL +G+KD + LWDL +G+ V L GH + ++
Sbjct: 959 TNKTQVL-------------------SGSKDMNLILWDLLTGEEVHTLAGHLGPVIGVKV 999
Query: 606 --DSVNLVTGAMDRSIRIWDLRTGILSDVFAYEQPITSLHFDLD--------KIVISNNE 655
D V+G+ D+++ +W+ + G+ P T HFD+ ++V S N
Sbjct: 1000 SADGSTAVSGSDDKTLIVWETKRGLALTSLQMHVPFT--HFDISLEVSRVLVQLVDSYNL 1057
Query: 656 PTVKIYN 662
P + ++N
Sbjct: 1058 PVICLHN 1064
Score = 70.9 bits (172), Expect = 6e-12
Identities = 71/282 (25%), Positives = 124/282 (43%), Gaps = 41/282 (14%)
Query: 367 SHRNRRRKTYPTLQQFYDSGSKITSLPKAHDEDITCLDFDMPFGTMCSAGSLDHSVKVWD 426
S RR+++ Q S S T+LP ITC D M A V +
Sbjct: 720 SRHPRRKRSLKRHAQAQRSPS--TTLPP-----ITCFDLSRDSQQMAIASG--RHVHLMR 770
Query: 427 LSKKKQIATLHGHLASISCMQIDQYST-LITGGRDAVLKLWDIDKAMADEASNSSEDNDA 485
++ + TL GH A +SC++ L TG D ++ +W++ E NS + + A
Sbjct: 771 INTPEYQCTLEGHTAGVSCLKFAPNGEFLATGSEDRLVHIWNL---ALGEICNSFKGHTA 827
Query: 486 CLYTFDSHVDEITAISFDGDNLVSGSQDRTVRQWDLNSGKCTQTIDISF----ATGPMRS 541
+ +D + IS D D+++ W +SG QTI + T MR
Sbjct: 828 PVVKVVVLMDSLRVISTDRDSMLL--------VWMAHSGNLLQTIQGPYKSLSVTNNMRF 879
Query: 542 QRNIPLRNSVL---LTKEPPAIGA-----LQCFDAA-----LATGTKDGIVRLWDLRSGK 588
+ N++ LT+E + CF+ + + +G++D +++W GK
Sbjct: 880 AVSTNGDNTLKIWSLTQEDEKYSVSHSDEITCFEISADSVHIISGSRDMSLKVWQATGGK 939
Query: 589 VVRMLEGHTDAITSLQFDSVN---LVTGAMDRSIRIWDLRTG 627
+ ++L GH+DA+T + N +++G+ D ++ +WDL TG
Sbjct: 940 LSQVLVGHSDAVTCVAVSVTNKTQVLSGSKDMNLILWDLLTG 981
Score = 55.8 bits (133), Expect = 2e-07
Identities = 72/292 (24%), Positives = 119/292 (40%), Gaps = 42/292 (14%)
Query: 379 LQQFYDSGSKITSLPKAHDEDITCLDF-DMPFGTMCSAGSLDHSVKVWDLSKKKQIATL- 436
+QQ++ + + + K H +TCL + GS D +V VW + +++ A +
Sbjct: 451 VQQWHIMSNSLDHIFKGHTAAVTCLLVAPQSDSELLLTGSEDATVLVWHVGLRERRAHIK 510
Query: 437 HGHLASISCMQIDQYSTLITGGRDAVLKLWDIDKAMADEASNSSEDNDACLYTFDSHVDE 496
+ H A I+ + +TLI + D A+ D AS + H
Sbjct: 511 NAHTAPITGVAAGANNTLIISSSE------DASIAITDLASGKLR------HRITHHRGP 558
Query: 497 ITAISFDG--DNLVSGSQDRTVRQWDLNSGKCTQTIDISFATGPMRSQRNIPLRNSVLLT 554
++ I G D L+SG DRT+ WDL++ T+ ++ A R NSV L
Sbjct: 559 VSGIVVAGACDVLISGGLDRTICVWDLDNFTLLNTMQMTSAV-----LRIDISWNSVFL- 612
Query: 555 KEPPAIGALQCFDAALATGTKDGIVRLWDLRSGKVVRMLEGHTDAITSLQF--DSVNLVT 612
C D AL T L +GK + L+GH I S+ DS V
Sbjct: 613 -------LALCEDNALYVRT---------LATGKELHTLKGHKSKIRSISIGKDSQRCVV 656
Query: 613 GAMDRSIRIWDLRTG-ILSDVFAYEQPITSLH-FDLDKIVISNNEPTVKIYN 662
G D I+D+ G ++ + P+T++H D D +++ + Y+
Sbjct: 657 GCDDTRALIYDMHAGKLVRSLPPNPGPVTAVHAMDNDDFLVTVGGNKITFYS 708
Score = 50.8 bits (120), Expect = 7e-06
Identities = 25/97 (25%), Positives = 53/97 (53%), Gaps = 1/97 (1%)
Query: 378 TLQQFYDSGSKITSLPKAHDEDITCLDFDMPFGTMCSAGSLDHSVKVWDLSKKKQIATLH 437
+L+ + +G K++ + H + +TC+ + T +GS D ++ +WDL +++ TL
Sbjct: 929 SLKVWQATGGKLSQVLVGHSDAVTCVAVSVTNKTQVLSGSKDMNLILWDLLTGEEVHTLA 988
Query: 438 GHLASISCMQID-QYSTLITGGRDAVLKLWDIDKAMA 473
GHL + +++ ST ++G D L +W+ + +A
Sbjct: 989 GHLGPVIGVKVSADGSTAVSGSDDKTLIVWETKRGLA 1025
>CE29339 [S] KOG0295 WD40 repeat-containing protein
Length = 404
Score = 75.5 bits (184), Expect = 3e-13
Identities = 62/258 (24%), Positives = 110/258 (42%), Gaps = 54/258 (20%)
Query: 408 PFGTMCSAGSLDHSVKVWDLSKKKQIATLHGHLASISCMQIDQYST-LITGGRDAVLKLW 466
P T+ ++ S D ++KVWD + TL GH +++ + ID L++ D +KLW
Sbjct: 116 PLWTIMASCSEDATIKVWDYETGQLERTLKGHTDAVNDIAIDAAGKQLVSCSSDLSIKLW 175
Query: 467 DIDKAMADEASNSSEDNDACLYTFDSHVDEITAISF--DGDNLVSGSQDRTVRQWDLNSG 524
D + CL + H +++++F GD ++S S+D T++QWD+++G
Sbjct: 176 DFGQTYD------------CLKSLKGHEHTVSSVTFLPTGDFVLSASRDHTIKQWDISTG 223
Query: 525 KCTQTIDISFATGPMRSQRNIPLRNSVLLTKEPPAIGALQCFDAALATGTKDGIVRLWDL 584
C T G R I + N L A+ + D V +W
Sbjct: 224 YCVYTF-----RGHNDWVRMIRISNDGTL----------------FASASLDQTVTVWSF 262
Query: 585 RSGKVVRMLEGHTDAITSLQF-----------------DSVNLVTGAMDRSIRIWDLRTG 627
+ +L H A+ +++ + L +G+ DRSI+ W++ TG
Sbjct: 263 ATKSAKLVLRDHEHAVECVEWAPDTAYTNVTGQQPEGNSTHILFSGSRDRSIKAWNINTG 322
Query: 628 -ILSDVFAYEQPITSLHF 644
+L + A+E + L F
Sbjct: 323 DVLFTLLAHENWVRGLAF 340
Score = 73.6 bits (179), Expect = 1e-12
Identities = 56/240 (23%), Positives = 108/240 (44%), Gaps = 31/240 (12%)
Query: 394 KAHDEDITCLDFDMPFGTMCSAGSLDHSVKVWDLSKKKQIATLHGHLASISCMQIDQYST 453
K H+ ++ + F +P G + S DH++K WD+S + T GH + ++I T
Sbjct: 188 KGHEHTVSSVTF-LPTGDFVLSASRDHTIKQWDISTGYCVYTFRGHNDWVRMIRISNDGT 246
Query: 454 LI-TGGRDAVLKLWDIDKAMADEASNSSEDNDACL-YTFDSHVDEITAISFDGDN---LV 508
L + D + +W A E C+ + D+ +T +G++ L
Sbjct: 247 LFASASLDQTVTVWSFATKSAKLVLRDHEHAVECVEWAPDTAYTNVTGQQPEGNSTHILF 306
Query: 509 SGSQDRTVRQWDLNSGKCTQTIDISFATGPMRSQRNIPLRNSVLLTKEPPAIG-ALQCFD 567
SGS+DR+++ W++N+G D+ F LL E G A
Sbjct: 307 SGSRDRSIKAWNINTG------DVLF----------------TLLAHENWVRGLAFHPKG 344
Query: 568 AALATGTKDGIVRLWDLRSGKVVRMLEGHTDAITSLQFDSVN--LVTGAMDRSIRIWDLR 625
L + D +R+W+L + + ++ +E H ++++ F + ++TG++D S ++W+ R
Sbjct: 345 KYLISVADDKTLRVWELSAQRCMKAIEAHEHFVSTVAFHQTSPFVITGSVDMSCKVWECR 404
Score = 52.0 bits (123), Expect = 3e-06
Identities = 31/114 (27%), Positives = 64/114 (55%), Gaps = 8/114 (7%)
Query: 570 LATGTKDGIVRLWDLRSGKVVRMLEGHTDAITSLQFDSV--NLVTGAMDRSIRIWDL--R 625
+A+ ++D +++WD +G++ R L+GHTDA+ + D+ LV+ + D SI++WD
Sbjct: 121 MASCSEDATIKVWDYETGQLERTLKGHTDAVNDIAIDAAGKQLVSCSSDLSIKLWDFGQT 180
Query: 626 TGILSDVFAYEQPITSLHF--DLDKIVISNNEPTVKIYNRKDGN--HWFCGEDD 675
L + +E ++S+ F D ++ ++ + T+K ++ G + F G +D
Sbjct: 181 YDCLKSLKGHEHTVSSVTFLPTGDFVLSASRDHTIKQWDISTGYCVYTFRGHND 234
>At1g71840 [S] KOG0296 Angio-associated migratory cell protein (contains WD40
repeats)
Length = 390
Score = 74.7 bits (182), Expect = 4e-13
Identities = 81/322 (25%), Positives = 131/322 (40%), Gaps = 68/322 (21%)
Query: 385 SGSKITSLPKAHDEDITCLDFDMPFGTMCSAGSLDHSVKVWDLSKKKQIATLHGHLASIS 444
+G LP H + ++CL F G + ++G LD V+++D S L G A I
Sbjct: 93 NGDWAAELP-GHKDSVSCLAFSYD-GQLLASGGLDGVVQIFDASSGTLKCVLDGPGAGIE 150
Query: 445 CMQIDQYSTLI-TGGRDAVLKLWDIDKAMADEASNSSEDNDACLYTFDSHVDEITAISF- 502
++ ++ G D L +W+ DK +A L F H +T F
Sbjct: 151 WVRWHPRGHIVLAGSEDCSLWMWNADK-------------EAYLNMFSGHNLNVTCGDFT 197
Query: 503 -DGDNLVSGSQDRTVRQWDLNSGKCTQTIDISFATGPMRSQRNIPLRNSVLLTKEPPAIG 561
DG + +GS D ++ W+ T P
Sbjct: 198 PDGKLICTGSDDASLIVWNPK-------------------------------TCHPYHTE 226
Query: 562 ALQCFD----AALA-TGTKDGIVRLWDLRSGKVVRMLEGHTDAITSLQFDSVN-----LV 611
L C D ++LA +G+KDG V + ++ +GKVV L HTD++ ++F +
Sbjct: 227 GLTCLDINSNSSLAISGSKDGSVHIVNIVTGKVVSSLNSHTDSVECVKFSPSSATIPLAA 286
Query: 612 TGAMDRSIRIWDLRTGILSDVFAYEQPITSLHFDLDKIVISNN--EPTVKIYNRKDGN-- 667
TG MD+ + IWDL+ + +E+ +TSL + ++ TV I++ GN
Sbjct: 287 TGGMDKKLIIWDLQHSTPRFICEHEEGVTSLTWIGTSKYLATGCANGTVSIWDSLLGNCV 346
Query: 668 HWFCGEDDPEQG-----NVDFV 684
H + G D Q N DF+
Sbjct: 347 HTYHGHQDAVQAISVSTNTDFI 368
Score = 52.8 bits (125), Expect = 2e-06
Identities = 56/244 (22%), Positives = 106/244 (42%), Gaps = 46/244 (18%)
Query: 408 PFGTMCSAGSLDHSVKVWDLSKKKQIATLHGHLASISCMQIDQYSTLI-TGGRDAVLKLW 466
P G + AGS D S+ +W+ K+ + GH +++C LI TG DA L +W
Sbjct: 156 PRGHIVLAGSEDCSLWMWNADKEAYLNMFSGHNLNVTCGDFTPDGKLICTGSDDASLIVW 215
Query: 467 DIDKAMADEASNSSEDNDACLYTFDSHVDEITAISFDGDN--LVSGSQDRTVRQWDLNSG 524
N + + H + +T + + ++ +SGS+D +V ++ +G
Sbjct: 216 ----------------NPKTCHPY--HTEGLTCLDINSNSSLAISGSKDGSVHIVNIVTG 257
Query: 525 KCTQTID--------ISF----------ATGPMRSQRNI-PLRNSV--LLTKEPPAIGAL 563
K +++ + F ATG M + I L++S + + + +L
Sbjct: 258 KVVSSLNSHTDSVECVKFSPSSATIPLAATGGMDKKLIIWDLQHSTPRFICEHEEGVTSL 317
Query: 564 QCFDAA--LATGTKDGIVRLWDLRSGKVVRMLEGHTDAITSLQFDSVN--LVTGAMDRSI 619
+ LATG +G V +WD G V GH DA+ ++ + +V+ ++D +
Sbjct: 318 TWIGTSKYLATGCANGTVSIWDSLLGNCVHTYHGHQDAVQAISVSTNTDFIVSVSVDNTA 377
Query: 620 RIWD 623
R+++
Sbjct: 378 RVFE 381
>SPBC32H8.07 [R] KOG0286 G-protein beta subunit
Length = 305
Score = 74.3 bits (181), Expect = 6e-13
Identities = 62/213 (29%), Positives = 92/213 (43%), Gaps = 40/213 (18%)
Query: 416 GSLDHSVKVWDLSKKKQIATLHGHLASISCMQI--DQYSTLITGGRDAVLKLWDIDKAMA 473
GS D + WD+ + K I+ L GH I + + +TGG D + KLWD+ A
Sbjct: 123 GSGDKTCMFWDIEQAKAISVLKGHEMDIVSLDFLPSNPNLFVTGGCDKLAKLWDLRAAY- 181
Query: 474 DEASNSSEDNDACLYTFDSHVDEITAISFDGDN--LVSGSQDRTVRQWDLNSGKCTQTID 531
C TF + +I +ISF N V+G++D R +D+ + + +
Sbjct: 182 ------------CCATFPGNTSDINSISFFPSNADFVTGAEDGIARCFDIRA-----SAE 224
Query: 532 ISFATGPMRSQRNIPLRNSVLLTKEPPAIGALQCFDAALATGTKDGIVRLWDLRSGKVVR 591
I + P S P+ NSVL +K L KD +WD S K +
Sbjct: 225 IFQYSSPSSS----PI-NSVLFSKS-----------GKLLFIAKDKTCEVWDSISSKTIT 268
Query: 592 MLEGHTDAITSLQF--DSVNLVTGAMDRSIRIW 622
L GH + I+SL D L TG+ D +R+W
Sbjct: 269 SLTGHENRISSLALTSDGTMLATGSWDECVRLW 301
>Hs4505895 [A] KOG0285 Pleiotropic regulator 1
Length = 514
Score = 74.3 bits (181), Expect = 6e-13
Identities = 71/294 (24%), Positives = 120/294 (40%), Gaps = 66/294 (22%)
Query: 416 GSLDHSVKVWDLSKKKQIATLHGHLASISCMQIDQYST-LITGGRDAVLKLWDID----- 469
GS D ++K+WDL+ K +L GH++++ + + S L + G D +K WD++
Sbjct: 222 GSADRTIKIWDLASGKLKLSLTGHISTVRGVIVSTRSPYLFSCGEDKQVKCWDLEYNKVI 281
Query: 470 ---------------KAMADEASNSSEDN---------DACLYTFDSHVDEITAISFDG- 504
D S D+ A ++T H + + +
Sbjct: 282 RHYHGHLSAVYGLDLHPTIDVLVTCSRDSTARIWDVRTKASVHTLSGHTNAVATVRCQAA 341
Query: 505 -DNLVSGSQDRTVRQWDLNSGKCTQTIDISFATGPMRSQRNIPLRNSVLLTKEPPAIGAL 563
+++GS D T+R WDL +GK T+ T +S R + L
Sbjct: 342 EPQIITGSHDTTIRLWDLVAGKTRVTL-----TNHKKSVRAVVLHPR------------- 383
Query: 564 QCFDAALATGTKDGIVRLWDLRSGKVVRMLEGHTDAITSLQFDSVN-LVTGAMDRSIRIW 622
A+G+ D I + W G ++ L GH I +L +S LV+GA + ++ +W
Sbjct: 384 ---HYTFASGSPDNI-KQWKFPDGSFIQNLSGHNAIINTLTVNSDGVLVSGADNGTMHLW 439
Query: 623 DLRTGI-LSDVFAYEQP--------ITSLHFDL--DKIVISNNEPTVKIYNRKD 665
D RTG V A QP I + FD +++ + + T+K+Y D
Sbjct: 440 DWRTGYNFQRVHAAVQPGSLDSESGIFACAFDQSESRLLTAEADKTIKVYREDD 493
Score = 63.5 bits (153), Expect = 1e-09
Identities = 48/202 (23%), Positives = 87/202 (42%), Gaps = 39/202 (19%)
Query: 431 KQIATLHGHLASISCMQIDQYST-LITGGRDAVLKLWDIDKAMADEASNSSEDNDACLYT 489
K + GHL + C+ ++ + +TG D +K+WD+ AS + +
Sbjct: 195 KLYRVISGHLGWVRCIAVEPGNQWFVTGSADRTIKIWDL-------ASGKLK------LS 241
Query: 490 FDSHVDEI--TAISFDGDNLVSGSQDRTVRQWDLNSGKCTQTIDISFATGPMRSQRNIPL 547
H+ + +S L S +D+ V+ WDL K I G + + + L
Sbjct: 242 LTGHISTVRGVIVSTRSPYLFSCGEDKQVKCWDLEYNKV-----IRHYHGHLSAVYGLDL 296
Query: 548 RNSVLLTKEPPAIGALQCFDAALATGTKDGIVRLWDLRSGKVVRMLEGHTDAITSLQFDS 607
++ L T ++D R+WD+R+ V L GHT+A+ +++ +
Sbjct: 297 HPTI----------------DVLVTCSRDSTARIWDVRTKASVHTLSGHTNAVATVRCQA 340
Query: 608 V--NLVTGAMDRSIRIWDLRTG 627
++TG+ D +IR+WDL G
Sbjct: 341 AEPQIITGSHDTTIRLWDLVAG 362
>At1g11160 [D] KOG0267 Microtubule severing protein katanin p80 subunit B
(contains WD40 repeats)
Length = 974
Score = 74.3 bits (181), Expect = 6e-13
Identities = 57/222 (25%), Positives = 93/222 (41%), Gaps = 40/222 (18%)
Query: 415 AGSLDHSVKVWDLSKKKQIATLHGHLASISCMQIDQYST-LITGGRDAVLKLWDIDKAMA 473
AG+ +K+WDL + K + GH ++ S ++ + L +G D L++WD K
Sbjct: 24 AGASSGVIKLWDLEESKMVRAFTGHRSNCSAVEFHPFGEFLASGSSDTNLRVWDTRK--- 80
Query: 474 DEASNSSEDNDACLYTFDSHVDEITAISF--DGDNLVSGSQDRTVRQWDLNSGKCTQTID 531
C+ T+ H I+ I F DG +VSG D V+ WDL +GK +
Sbjct: 81 ----------KGCIQTYKGHTRGISTIEFSPDGRWVVSGGLDNVVKVWDLTAGKLLH--E 128
Query: 532 ISFATGPMRSQRNIPLRNSVLLTKEPPAIGALQCFDAALATGTKDGIVRLWDLRSGKVVR 591
GP+RS PL + LATG+ D V+ WDL + +++
Sbjct: 129 FKCHEGPIRSLDFHPL-------------------EFLLATGSADRTVKFWDLETFELIG 169
Query: 592 MLEGHTDAITSLQF--DSVNLVTGAMDRSIRIWDLRTGILSD 631
+ ++ F D L G +D ++++ I D
Sbjct: 170 TTRPEATGVRAIAFHPDGQTLFCG-LDDGLKVYSWEPVICRD 210
Score = 70.5 bits (171), Expect = 8e-12
Identities = 62/246 (25%), Positives = 93/246 (37%), Gaps = 56/246 (22%)
Query: 435 TLHGHLASISCMQIDQYSTLITGGRDA-VLKLWDIDKAMADEASNSSEDNDACLYTFDSH 493
+L GH + + + + L+ G + V+KLWD++++ A F H
Sbjct: 2 SLCGHTSPVDSVAFNSEEVLVLAGASSGVIKLWDLEESKMVRA-------------FTGH 48
Query: 494 VDEITAISFD--GDNLVSGSQDRTVRQWDLNSGKCTQTIDISFATGPMRSQRNIPLRNSV 551
+A+ F G+ L SGS D +R WD C QT G R I
Sbjct: 49 RSNCSAVEFHPFGEFLASGSSDTNLRVWDTRKKGCIQTY-----KGHTRGISTIEFSPD- 102
Query: 552 LLTKEPPAIGALQCFDAALATGTKDGIVRLWDLRSGKVVRMLEGHTDAITSLQFDSVN-- 609
+ +G D +V++WDL +GK++ + H I SL F +
Sbjct: 103 ---------------GRWVVSGGLDNVVKVWDLTAGKLLHEFKCHEGPIRSLDFHPLEFL 147
Query: 610 LVTGAMDRSIRIWDLRTGILSDVFAYEQPITSLHFDLDKIVISNNEPTVKIYNRKDGNHW 669
L TG+ DR+++ WDL T F+L I DG
Sbjct: 148 LATGSADRTVKFWDLET-----------------FELIGTTRPEATGVRAIAFHPDGQTL 190
Query: 670 FCGEDD 675
FCG DD
Sbjct: 191 FCGLDD 196
Score = 65.1 bits (157), Expect = 4e-10
Identities = 43/140 (30%), Positives = 67/140 (47%), Gaps = 17/140 (12%)
Query: 387 SKITSLPKAHDEDITCLDFDMPFGTMCSAGSLDHSVKVWDLSKKKQIATLHGHLASISCM 446
SK+ H + + ++F PFG ++GS D +++VWD KK I T GH IS +
Sbjct: 39 SKMVRAFTGHRSNCSAVEFH-PFGEFLASGSSDTNLRVWDTRKKGCIQTYKGHTRGISTI 97
Query: 447 QIDQYST-LITGGRDAVLKLWDIDKAMADEASNSSEDNDACLYTFDSHVDEITAISFDGD 505
+ +++GG D V+K+WD+ L+ F H I ++ F
Sbjct: 98 EFSPDGRWVVSGGLDNVVKVWDLTAG-------------KLLHEFKCHEGPIRSLDFHPL 144
Query: 506 N--LVSGSQDRTVRQWDLNS 523
L +GS DRTV+ WDL +
Sbjct: 145 EFLLATGSADRTVKFWDLET 164
>Hs20548461 [R] KOG0644 Uncharacterized conserved protein contains WD40 repeat
and BROMO domains
Length = 736
Score = 73.9 bits (180), Expect = 8e-13
Identities = 69/255 (27%), Positives = 113/255 (44%), Gaps = 29/255 (11%)
Query: 396 HDEDITCLDFDMPFGTMCSAGSLDHSVKVWDLSKKKQIATLHGHLASISCMQIDQYSTLI 455
H + C+ FD G GS D VK+W + +ATL GH A IS M ++ +TLI
Sbjct: 210 HLSSVYCVAFDRS-GRRIFTGSDDCLVKIWATDDGRLLATLRGHSAEISDMAVNYENTLI 268
Query: 456 TGGR-DAVLKLWDIDK----AMADEASNSSEDNDACLYTFDSHVDEITAISFDGD----- 505
G D V+++W + A+ S S C T ++ +T+ DG
Sbjct: 269 AAGSCDKVVRVWCLRTCAPVAVLQGHSASITSIQFCPSTKGTN-RYLTSTGADGTICFWQ 327
Query: 506 ----------NLVSGSQDRTVRQWDLNSGKCTQTIDISFATGPMRSQRNIPLRNSVLLTK 555
VSGS+D T R W + ++I + AT + N+P + TK
Sbjct: 328 WHVKTMKFSLRFVSGSRDGTARIWQYQQQEW-KSIVLDMAT--KMTGNNLPSGEDKI-TK 383
Query: 556 EPPAIGALQCFDAALATGTKDGIVRLWDLRSGKVVRMLEGHTDAITSLQ---FDSVNLVT 612
+ A +D + T + ++++W+ +G+++ L GH D + L+ FD +++
Sbjct: 384 LKVTMVAWDRYDTTVITAVNNFLLKVWNSITGQLLHTLSGHDDEVFVLEAHPFDQRIILS 443
Query: 613 GAMDRSIRIWDLRTG 627
D +I IWDL G
Sbjct: 444 AGHDGNIFIWDLDRG 458
>CE29560 [S] KOG0300 WD40 repeat-containing protein
Length = 486
Score = 73.9 bits (180), Expect = 8e-13
Identities = 59/239 (24%), Positives = 101/239 (41%), Gaps = 42/239 (17%)
Query: 396 HDEDITCLDFDMPFGTMCSAGSLDHSVKVWDLSKKKQIATLHGHLASIS-CMQIDQYSTL 454
H ++C ++ + G S D + VWD+ K + + L GH + ++ C +
Sbjct: 279 HRAPVSCCEW-LAGGQQMVTASWDRTANVWDVEKGEVVNILSGHESELNHCSTHSNQKLV 337
Query: 455 ITGGRDAVLKLWDIDKAMADEASNSSEDNDACLYTFDSHVDEITAISFDGD-NLVSGSQD 513
+T +D+ +LWD +A+ A F H D +T++SF+ D +VS S D
Sbjct: 338 LTSSKDSTFRLWDFREAIQSVA------------VFQGHQDSVTSVSFNTDYRIVSSSDD 385
Query: 514 RTVRQWDLNSGKCTQTIDISFATGPMRSQRNIPLRNSVLLTKEPPAIGALQCFDAALATG 573
TV+ WDL + + P+ + R N V ++K P I A
Sbjct: 386 ATVKIWDLRNMRT-----------PLATIRLSSPANRVAISKSHPVI----------AIP 424
Query: 574 TKDGIVRLWDLRSGKVVRM--LEGHTDAITSL----QFDSVNLVTGAMDRSIRIWDLRT 626
+ VR++DL ++ RM H +T + + NL+T DR + W + T
Sbjct: 425 MDNRHVRIYDLNGNRLPRMPNRRCHERMVTCCAWLDEHPANNLLTAGFDRMVAAWKVNT 483
Score = 63.2 bits (152), Expect = 1e-09
Identities = 59/263 (22%), Positives = 107/263 (40%), Gaps = 30/263 (11%)
Query: 412 MCSAGSLDHSVKVWDLSKKKQIATLHGHLASISCMQIDQYSTLITGGRDAVLKLWDIDKA 471
+C++ S D + ++W L +AT GH S++C+ I +
Sbjct: 154 ICASASADQTARIWSLESGACLATYTGHTGSVNCVAIS-------------------NNC 194
Query: 472 MADEASNSSEDNDACLYTFDSHVDEITAI-SFDGDNLVSGSQDRTVRQWDLNSGKCTQTI 530
D S + L T DE T I +N S + + +
Sbjct: 195 AVDSTEGSGPASGLLLATASG--DESTHIWKVPSNNAPSDHSSEEEEEHHRDPNNLLGVV 252
Query: 531 DISFATGPMRSQRNIPLRNSVL-LTKEPPAIGALQCFDAA--LATGTKDGIVRLWDLRSG 587
+ + T +R V+ LT + + + T + D +WD+ G
Sbjct: 253 EHNRFTSSSEKSDGHRIRVPVMRLTGHRAPVSCCEWLAGGQQMVTASWDRTANVWDVEKG 312
Query: 588 KVVRMLEGHTDAIT--SLQFDSVNLVTGAMDRSIRIWDLRTGILS-DVF-AYEQPITSLH 643
+VV +L GH + S + ++T + D + R+WD R I S VF ++ +TS+
Sbjct: 313 EVVNILSGHESELNHCSTHSNQKLVLTSSKDSTFRLWDFREAIQSVAVFQGHQDSVTSVS 372
Query: 644 FDLD-KIVISNNEPTVKIYNRKD 665
F+ D +IV S+++ TVKI++ ++
Sbjct: 373 FNTDYRIVSSSDDATVKIWDLRN 395
>CE26861 [S] KOG0300 WD40 repeat-containing protein
Length = 484
Score = 73.9 bits (180), Expect = 8e-13
Identities = 59/239 (24%), Positives = 101/239 (41%), Gaps = 42/239 (17%)
Query: 396 HDEDITCLDFDMPFGTMCSAGSLDHSVKVWDLSKKKQIATLHGHLASIS-CMQIDQYSTL 454
H ++C ++ + G S D + VWD+ K + + L GH + ++ C +
Sbjct: 277 HRAPVSCCEW-LAGGQQMVTASWDRTANVWDVEKGEVVNILSGHESELNHCSTHSNQKLV 335
Query: 455 ITGGRDAVLKLWDIDKAMADEASNSSEDNDACLYTFDSHVDEITAISFDGD-NLVSGSQD 513
+T +D+ +LWD +A+ A F H D +T++SF+ D +VS S D
Sbjct: 336 LTSSKDSTFRLWDFREAIQSVA------------VFQGHQDSVTSVSFNTDYRIVSSSDD 383
Query: 514 RTVRQWDLNSGKCTQTIDISFATGPMRSQRNIPLRNSVLLTKEPPAIGALQCFDAALATG 573
TV+ WDL + + P+ + R N V ++K P I A
Sbjct: 384 ATVKIWDLRNMRT-----------PLATIRLSSPANRVAISKSHPVI----------AIP 422
Query: 574 TKDGIVRLWDLRSGKVVRM--LEGHTDAITSL----QFDSVNLVTGAMDRSIRIWDLRT 626
+ VR++DL ++ RM H +T + + NL+T DR + W + T
Sbjct: 423 MDNRHVRIYDLNGNRLPRMPNRRCHERMVTCCAWLDEHPANNLLTAGFDRMVAAWKVNT 481
Score = 63.2 bits (152), Expect = 1e-09
Identities = 59/263 (22%), Positives = 107/263 (40%), Gaps = 30/263 (11%)
Query: 412 MCSAGSLDHSVKVWDLSKKKQIATLHGHLASISCMQIDQYSTLITGGRDAVLKLWDIDKA 471
+C++ S D + ++W L +AT GH S++C+ I +
Sbjct: 152 ICASASADQTARIWSLESGACLATYTGHTGSVNCVAIS-------------------NNC 192
Query: 472 MADEASNSSEDNDACLYTFDSHVDEITAI-SFDGDNLVSGSQDRTVRQWDLNSGKCTQTI 530
D S + L T DE T I +N S + + +
Sbjct: 193 AVDSTEGSGPASGLLLATASG--DESTHIWKVPSNNAPSDHSSEEEEEHHRDPNNLLGVV 250
Query: 531 DISFATGPMRSQRNIPLRNSVL-LTKEPPAIGALQCFDAA--LATGTKDGIVRLWDLRSG 587
+ + T +R V+ LT + + + T + D +WD+ G
Sbjct: 251 EHNRFTSSSEKSDGHRIRVPVMRLTGHRAPVSCCEWLAGGQQMVTASWDRTANVWDVEKG 310
Query: 588 KVVRMLEGHTDAIT--SLQFDSVNLVTGAMDRSIRIWDLRTGILS-DVF-AYEQPITSLH 643
+VV +L GH + S + ++T + D + R+WD R I S VF ++ +TS+
Sbjct: 311 EVVNILSGHESELNHCSTHSNQKLVLTSSKDSTFRLWDFREAIQSVAVFQGHQDSVTSVS 370
Query: 644 FDLD-KIVISNNEPTVKIYNRKD 665
F+ D +IV S+++ TVKI++ ++
Sbjct: 371 FNTDYRIVSSSDDATVKIWDLRN 393
>At2g41500 [A] KOG0272 U4/U6 small nuclear ribonucleoprotein Prp4 (contains
WD40 repeats)
Length = 554
Score = 73.9 bits (180), Expect = 8e-13
Identities = 60/223 (26%), Positives = 93/223 (40%), Gaps = 43/223 (19%)
Query: 410 GTMCSAGSLDHSVKVWDLSK-KKQIATLHGHLASISCMQIDQYST-LITGGRDAVLKLWD 467
G + + SL K+W++ + IA L H + + L T D KLW
Sbjct: 267 GKILATCSLSGVTKLWEMPQVTNTIAVLKDHKERATDVVFSPVDDCLATASADRTAKLWK 326
Query: 468 IDKAMADEASNSSEDNDACLYTFDSHVDEITAISF--DGDNLVSGSQDRTVRQWDLNSGK 525
D + L TF+ H+D + ++F G L + S D+T R WD+N+G
Sbjct: 327 TDGTL--------------LQTFEGHLDRLARVAFHPSGKYLGTTSYDKTWRLWDINTGA 372
Query: 526 CTQTIDISFATGPMRSQRNIPLRNSVLLTKEPPAIGALQCFDAALATGTK-DGIVRLWDL 584
++ G RS I + D ALA D + R+WDL
Sbjct: 373 -----ELLLQEGHSRSVYGIAFQQ-----------------DGALAASCGLDSLARVWDL 410
Query: 585 RSGKVVRMLEGHTDAITSLQF--DSVNLVTGAMDRSIRIWDLR 625
R+G+ + + +GH + S+ F + +L +G D RIWDLR
Sbjct: 411 RTGRSILVFQGHIKPVFSVNFSPNGYHLASGGEDNQCRIWDLR 453
Score = 66.2 bits (160), Expect = 2e-10
Identities = 54/220 (24%), Positives = 88/220 (39%), Gaps = 38/220 (17%)
Query: 408 PFGTMCSAGSLDHSVKVWDLSKKKQIATLHGHLASISCMQIDQYSTLITG-GRDAVLKLW 466
P G S D + ++WD++ ++ GH S+ + Q L G D++ ++W
Sbjct: 349 PSGKYLGTTSYDKTWRLWDINTGAELLLQEGHSRSVYGIAFQQDGALAASCGLDSLARVW 408
Query: 467 DIDKAMADEASNSSEDNDACLYTFDSHVDEITAISF--DGDNLVSGSQDRTVRQWDLNSG 524
D+ + + F H+ + +++F +G +L SG +D R WDL
Sbjct: 409 DLRTGRS-------------ILVFQGHIKPVFSVNFSPNGYHLASGGEDNQCRIWDLRMR 455
Query: 525 KCTQTIDISFATGPMRSQRNIPLRNSVLLTKEPPAIGALQCFDAALATGTKDGIVRLWDL 584
K I N V K P G LAT + D V +W
Sbjct: 456 KSLYIIPAH--------------ANLVSQVKYEPQEGYF------LATASYDMKVNIWSG 495
Query: 585 RSGKVVRMLEGHTDAITSLQF--DSVNLVTGAMDRSIRIW 622
R +V+ L GH + SL DS + T + DR+I++W
Sbjct: 496 RDFSLVKSLAGHESKVASLDITADSSCIATVSHDRTIKLW 535
>7301796 [A] KOG0272 U4/U6 small nuclear ribonucleoprotein Prp4 (contains
WD40 repeats)
Length = 436
Score = 73.9 bits (180), Expect = 8e-13
Identities = 71/273 (26%), Positives = 100/273 (36%), Gaps = 62/273 (22%)
Query: 358 SKKIKDVGVSHRNRRRKTYPTLQQFYDSGSKITSLPKAHDEDITCLDFDMPFGTMCSAGS 417
S +I DV SH LQQ G+++ + D G M GS
Sbjct: 217 SARIYDVETSHE---------LQQLTHHGAEVIAARFNRD------------GQMLLTGS 255
Query: 418 LDHSVKVWDLSKKKQIATLHGHLASIS-CMQIDQYSTLITGGRDAVLKLWDIDKAMADEA 476
DHS +WD+ K L GH A +S C+ S + TG D ++WD K
Sbjct: 256 FDHSAAIWDVRSKSLGHQLRGHSAELSNCVWNFSGSLIATGSLDNTARIWDTRKL----- 310
Query: 477 SNSSEDNDACLYTFDSHVDEITAISFD--GDNLVSGSQDRTVRQWDLNSGKCTQTIDISF 534
D LY H DE+ +SFD G L + S D T R W L + + +
Sbjct: 311 -------DQELYLAARHSDEVLDVSFDAAGQLLATCSSDCTARVWRLEGSSELEMLSLMA 363
Query: 535 ATGPMRSQRNIPLRNSVLLTKEPPAIGALQCFDAA---LATGTKDGIVRLWDLRSGKVVR 591
S+ CF + L T + D RLW SG+ +
Sbjct: 364 GHSDEVSK---------------------VCFSPSGCMLLTASADNTARLWLTESGQCSQ 402
Query: 592 MLEGHTDAITSLQFDSVN--LVTGAMDRSIRIW 622
+L GH + S + ++T + D S R W
Sbjct: 403 VLAGHEGEVFSCAYSYAGDAILTASKDNSCRFW 435
Score = 65.5 bits (158), Expect = 3e-10
Identities = 58/249 (23%), Positives = 100/249 (39%), Gaps = 45/249 (18%)
Query: 396 HDEDITCLDFDMPFGTMCSAGSLDHSVKVWDLSKKKQIATLHGHLASISCMQIDQ-YSTL 454
H ++ +F G + SLD S +++D+ ++ L H A + + ++ L
Sbjct: 192 HTAELVAAEFHPVDGKSIATASLDGSARIYDVETSHELQQLTHHGAEVIAARFNRDGQML 251
Query: 455 ITGGRDAVLKLWDI-DKAMADEASNSSEDNDACLYTFDSHVDEITAISFDGDNLVSGSQD 513
+TG D +WD+ K++ + S + C++ +F G + +GS D
Sbjct: 252 LTGSFDHSAAIWDVRSKSLGHQLRGHSAELSNCVW------------NFSGSLIATGSLD 299
Query: 514 RTVRQWDLNSGKCTQTIDISFATGPMRSQRNIPLRNSVLLTKEPPAIGALQCFDAA---L 570
T R WD T+ +D S + + FDAA L
Sbjct: 300 NTARIWD------TRKLDQELYLAARHSDEVLDV-----------------SFDAAGQLL 336
Query: 571 ATGTKDGIVRLWDLRSGKVVRMLE---GHTDAITSLQF--DSVNLVTGAMDRSIRIWDLR 625
AT + D R+W L + ML GH+D ++ + F L+T + D + R+W
Sbjct: 337 ATCSSDCTARVWRLEGSSELEMLSLMAGHSDEVSKVCFSPSGCMLLTASADNTARLWLTE 396
Query: 626 TGILSDVFA 634
+G S V A
Sbjct: 397 SGQCSQVLA 405
>YFL009w [R] KOG0274 Cdc4 and related F-box and WD-40 proteins
Length = 779
Score = 73.6 bits (179), Expect = 1e-12
Identities = 63/239 (26%), Positives = 102/239 (42%), Gaps = 38/239 (15%)
Query: 400 ITCLDFDMPFGTMCSAGSLDHSVKVWDLSKKKQIATLHGHLASISCMQIDQYSTLITGGR 459
ITCL F+ + G+ D ++V+D KK + L GH + ++ L++G
Sbjct: 385 ITCLQFEDNY---VITGADDKMIRVYDSINKKFLLQLSGHDGGVWALKYAHGGILVSGST 441
Query: 460 DAVLKLWDIDKAMADEASNSSEDNDACLYTFDSHVDEITAISFDGDNLVSGSQDRTVRQW 519
D +++WDI K CL + E I + +V+GS+D T+ W
Sbjct: 442 DRTVRVWDIKKGCCTHVFKGHNSTVRCL-----DIVEYKNIKY----IVTGSRDNTLHVW 492
Query: 520 DLNSGKCTQTIDISFATGPMRSQRNIPLRNSVLLTKE--PPAIGALQCFDAALAT----- 572
L + + + PL V T E P +G L+ A++ T
Sbjct: 493 KLPK---------ESSVPDHGEEHDYPL---VFHTPEENPYFVGVLRGHMASVRTVSGHG 540
Query: 573 -----GTKDGIVRLWDLRSGKVVRMLEGHTDAITSLQFD--SVNLVTGAMDRSIRIWDL 624
G+ D + +WD+ K + +L GHTD I S +D ++ +MD +IRIWDL
Sbjct: 541 NIVVSGSYDNTLIVWDVAQMKCLYILSGHTDRIYSTIYDHERKRCISASMDTTIRIWDL 599
Score = 72.4 bits (176), Expect = 2e-12
Identities = 76/308 (24%), Positives = 116/308 (36%), Gaps = 71/308 (23%)
Query: 383 YDSGSKITSLP-KAHDEDITCLDFDMPFGTMCSAGSLDHSVKVWDLSKKKQIATLHGHLA 441
YDS +K L HD + L + G + +GS D +V+VWD+ K GH +
Sbjct: 407 YDSINKKFLLQLSGHDGGVWALKY--AHGGILVSGSTDRTVRVWDIKKGCCTHVFKGHNS 464
Query: 442 SISCMQIDQYSTL---ITGGRDAVLKLWDIDKA--------------------------- 471
++ C+ I +Y + +TG RD L +W + K
Sbjct: 465 TVRCLDIVEYKNIKYIVTGSRDNTLHVWKLPKESSVPDHGEEHDYPLVFHTPEENPYFVG 524
Query: 472 -----MADEASNSSEDNDA------------------CLYTFDSHVDEITAISFDGDN-- 506
MA + S N CLY H D I + +D +
Sbjct: 525 VLRGHMASVRTVSGHGNIVVSGSYDNTLIVWDVAQMKCLYILSGHTDRIYSTIYDHERKR 584
Query: 507 LVSGSQDRTVRQWDL----NSGKCTQTIDISFATGPMRSQRNIPLRNSVLLTKEPPAIGA 562
+S S D T+R WDL N+G+C S+AT I L L +G
Sbjct: 585 CISASMDTTIRIWDLENIWNNGEC------SYATNSASPCAKI-LGAMYTLQGHTALVGL 637
Query: 563 LQCFDAALATGTKDGIVRLWDLRS-GKVVRMLEGHTDAITSLQFDSVNLVTGAMDRSIRI 621
L+ D L + DG +R WD + + AIT+ + S N++ + I
Sbjct: 638 LRLSDKFLVSAAADGSIRGWDANDYSRKFSYHHTNLSAITTF-YVSDNILVSGSENQFNI 696
Query: 622 WDLRTGIL 629
++LR+G L
Sbjct: 697 YNLRSGKL 704
>At5g67320 [B] KOG0273 Beta-transducin family (WD-40 repeat) protein
Length = 613
Score = 73.6 bits (179), Expect = 1e-12
Identities = 66/263 (25%), Positives = 113/263 (42%), Gaps = 47/263 (17%)
Query: 398 EDITCLDFDMPFGTMCSAGSLDHSVKVWDLSKKKQIATLHGHLASISCMQIDQYST-LIT 456
+D+T LD++ GT+ + GS D ++W L+ + I+TL H I ++ ++ L+T
Sbjct: 325 KDVTTLDWNGE-GTLLATGSCDGQARIWTLNGEL-ISTLSKHKGPIFSLKWNKKGDYLLT 382
Query: 457 GGRDAVLKLWDI-----------------DKAMADEASNSSEDNDACLY----------- 488
G D +WD+ D + S ++ D+ +Y
Sbjct: 383 GSVDRTAVVWDVKAEEWKQQFEFHSGPTLDVDWRNNVSFATSSTDSMIYLCKIGETRPAK 442
Query: 489 TFDSHVDEITAISFD--GDNLVSGSQDRTVRQWDLNSGKCTQTIDISFATGPMRSQRNIP 546
TF H E+ + +D G L S S D T + W++ T D+ T + + R P
Sbjct: 443 TFTGHQGEVNCVKWDPTGSLLASCSDDSTAKIWNIKQS--TFVHDLREHTKEIYTIRWSP 500
Query: 547 LRNSVLLTKEPPAIGALQCFDAALATGTKDGIVRLWDLRSGKVVRMLEGHTDAITSLQF- 605
T P LA+ + D V+LWD GK++ GH + + SL F
Sbjct: 501 TGPG---TNNPNK-------QLTLASASFDSTVKLWDAELGKMLCSFNGHREPVYSLAFS 550
Query: 606 -DSVNLVTGAMDRSIRIWDLRTG 627
+ + +G++D+SI IW ++ G
Sbjct: 551 PNGEYIASGSLDKSIHIWSIKEG 573
Score = 52.4 bits (124), Expect = 2e-06
Identities = 32/146 (21%), Positives = 69/146 (46%), Gaps = 26/146 (17%)
Query: 396 HDEDITCLDFDMPFGTMCSAGSLDHSVKVWDLSKKKQIATLHGHLASISCMQI------- 448
H ++ C+ +D P G++ ++ S D + K+W++ + + L H I ++
Sbjct: 447 HQGEVNCVKWD-PTGSLLASCSDDSTAKIWNIKQSTFVHDLREHTKEIYTIRWSPTGPGT 505
Query: 449 ---DQYSTLITGGRDAVLKLWDIDKAMADEASNSSEDNDACLYTFDSHVDEITAISF--D 503
++ TL + D+ +KLWD + L +F+ H + + +++F +
Sbjct: 506 NNPNKQLTLASASFDSTVKLWDAELGKM-------------LCSFNGHREPVYSLAFSPN 552
Query: 504 GDNLVSGSQDRTVRQWDLNSGKCTQT 529
G+ + SGS D+++ W + GK +T
Sbjct: 553 GEYIASGSLDKSIHIWSIKEGKIVKT 578
Score = 50.4 bits (119), Expect = 9e-06
Identities = 49/192 (25%), Positives = 85/192 (43%), Gaps = 28/192 (14%)
Query: 446 MQIDQYSTLITGGRDAVLKLWDIDKAMADEASNSSEDNDACLYTFDSHVDEITAISFD-- 503
M IDQ I G + DI + S +S ++ + + H E+ A ++
Sbjct: 220 MVIDQTDKEIAGDGSTGAEPMDI---VMTPTSQTSHIPNSDVRILEGHTSEVCACAWSPS 276
Query: 504 GDNLVSGSQDRTVRQWDL--------NSGKCTQTIDISFATGPMRSQRNIPLRNSVLLTK 555
L SGS D T R W + ++G+ + + A G ++ + T
Sbjct: 277 ASLLASGSGDATARIWSIPEGSFKAVHTGRNINALILKHAKGKSNE------KSKDVTTL 330
Query: 556 EPPAIGALQCFDAALATGTKDGIVRLWDLRSGKVVRMLEGHTDAITSLQFDSVN--LVTG 613
+ G L LATG+ DG R+W L +G+++ L H I SL+++ L+TG
Sbjct: 331 DWNGEGTL------LATGSCDGQARIWTL-NGELISTLSKHKGPIFSLKWNKKGDYLLTG 383
Query: 614 AMDRSIRIWDLR 625
++DR+ +WD++
Sbjct: 384 SVDRTAVVWDVK 395
>SPBC6B1.10 [S] KOG0282 mRNA splicing factor
Length = 558
Score = 73.2 bits (178), Expect = 1e-12
Identities = 60/243 (24%), Positives = 103/243 (41%), Gaps = 41/243 (16%)
Query: 430 KKQIATLHGHLASISCMQIDQYS--TLITGGRDAVLKLWDIDKAMADEASNSSEDNDACL 487
KK I T GH ISC++ S L++G D +K+W++ + + L
Sbjct: 256 KKHIFTWKGHTKGISCLRFFPISGHLLLSGSMDNQIKIWEV------------YHDRSLL 303
Query: 488 YTFDSHVDEITAISF--DGDNLVSGSQDRTVRQWDLNSGKCTQTIDISFATGPMRSQRNI 545
TF H I +SF DG + +S S D+T++ WD GKC + T ++ Q +
Sbjct: 304 RTFQGHARPIRDLSFSQDGRSFLSTSFDKTIKLWDTELGKCLNCFNSDRLTNCVKFQVDP 363
Query: 546 PLRNSVLLTKEPPAIGALQCFDAALATGTKDGIVRLWDLRSGKVVRMLEGHTDAITSLQF 605
N L GT D + +D+RS +V+ + H I S+ F
Sbjct: 364 DKPNEFL-------------------AGTADKRILQFDIRSPDIVQAYDHHLGGINSITF 404
Query: 606 --DSVNLVTGAMDRSIRIWDLRTGI----LSDVFAYEQPITSLHFDLDKIVISNNEPTVK 659
+ VT + D S+R W+ T + ++D+ + P +L + I + + +
Sbjct: 405 LENGKRFVTTSDDSSMRFWEYGTPVPIKFVADIAMHSMPRVALRPNGKSIACQSLDNCIY 464
Query: 660 IYN 662
+Y+
Sbjct: 465 VYS 467
>CE06574 [R] KOG0266 WD40 repeat-containing protein
Length = 501
Score = 73.2 bits (178), Expect = 1e-12
Identities = 55/241 (22%), Positives = 110/241 (44%), Gaps = 45/241 (18%)
Query: 414 SAGSLDHSVKVWDLSKKKQIATLHGHLASISCMQIDQYSTLI-TGGRDAVLKLWDIDKAM 472
++ S D +VK++D+ + T+ GH + C + S+LI + G D +++WD +
Sbjct: 271 ASASDDTTVKIFDVISGACLRTMRGHTNYVFCCSFNPQSSLIASAGFDETVRVWDFKTGL 330
Query: 473 ADEASNSSEDNDACLYTFDSHVDEITAISF--DGDNLVSGSQDRTVRQWDLNSGKCTQTI 530
C+ +H D IT+IS+ DG+ + + S D +R WD SG C +T+
Sbjct: 331 -------------CVKCIPAHSDPITSISYNHDGNTMATSSYDGCIRVWDAASGSCLKTL 377
Query: 531 ------DISFATGPMRSQRNIPLR-NSVLLTKEPPAIGALQCFDAA-------------- 569
++F + + + +S L +P L+ ++
Sbjct: 378 VDTDHAPVTFVCFSPNGKYLLSAQLDSSLKLWDPKKAKPLKYYNGHKNKKYCLFANMSVP 437
Query: 570 ----LATGTKDGIVRLWDLRSGKVVRMLEGHTDAITSL-QFDSVNLVTGA---MDRSIRI 621
+ +G++DG + +W +++ ++V++LEGHT + + ++N++ D IRI
Sbjct: 438 LGKHIISGSEDGRILVWSIQTKQIVQILEGHTTPVLATDSHPTLNIIASGGLEPDNVIRI 497
Query: 622 W 622
W
Sbjct: 498 W 498
Score = 64.7 bits (156), Expect = 5e-10
Identities = 70/288 (24%), Positives = 125/288 (43%), Gaps = 52/288 (18%)
Query: 433 IATLHGHLASISCMQIDQYSTLI-TGGRDAVLKLWD-IDKAMADEASNSSEDNDACLYTF 490
+ T+ GH S+S ++ + TG D +K+W+ +D L T
Sbjct: 206 VKTISGHTKSVSVIKFSYCGKYLGTGSADKQIKVWNTVDMTY--------------LQTL 251
Query: 491 DSHVDEITAISFDGDN--LVSGSQDRTVRQWDLNSGKCTQTIDISFATGPMRSQRNIPLR 548
SH I S+ ++ + S S D TV+ +D+ SG C +T MR N
Sbjct: 252 ASHQLGINDFSWSSNSQFIASASDDTTVKIFDVISGACLRT---------MRGHTNY--- 299
Query: 549 NSVLLTKEPPAIGALQCFDAALATGTKDGIVRLWDLRSGKVVRMLEGHTDAITSLQF--D 606
V P + +A+ D VR+WD ++G V+ + H+D ITS+ + D
Sbjct: 300 --VFCCSFNPQ-------SSLIASAGFDETVRVWDFKTGLCVKCIPAHSDPITSISYNHD 350
Query: 607 SVNLVTGAMDRSIRIWDLRTG--ILSDVFAYEQPITSLHFDLD-KIVISNN-EPTVKIYN 662
+ T + D IR+WD +G + + V P+T + F + K ++S + ++K+++
Sbjct: 351 GNTMATSSYDGCIRVWDAASGSCLKTLVDTDHAPVTFVCFSPNGKYLLSAQLDSSLKLWD 410
Query: 663 RKDGN--HWFCGEDDPEQ---GNVDFVRYKHGYLVEGRSNGDINTWAI 705
K ++ G + + N+ KH ++ G +G I W+I
Sbjct: 411 PKKAKPLKYYNGHKNKKYCLFANMSVPLGKH--IISGSEDGRILVWSI 456
>7293972 [A] KOG0272 U4/U6 small nuclear ribonucleoprotein Prp4 (contains
WD40 repeats)
Length = 553
Score = 73.2 bits (178), Expect = 1e-12
Identities = 50/220 (22%), Positives = 93/220 (41%), Gaps = 38/220 (17%)
Query: 408 PFGTMCSAGSLDHSVKVWDLSKKKQIATLHGHLASISCMQI-DQYSTLITGGRDAVLKLW 466
P G + D S ++WDL +K ++ GH + C+ S L+TGG DA ++W
Sbjct: 363 PSGRFLATACYDSSWRLWDLEQKTEVLHQEGHAKPVHCLSYHSDGSVLVTGGLDAFGRVW 422
Query: 467 DIDKAMADEASNSSEDNDACLYTFDSHVDEITAISF--DGDNLVSGSQDRTVRQWDLNSG 524
D+ C+ + H+ + + F +G ++ +GSQD T + WDL
Sbjct: 423 DLRTGR-------------CIMFLEGHLGAVFGVDFSPNGFHIATGSQDNTCKIWDLRRR 469
Query: 525 KCTQTIDISFATGPMRSQRNIPLRNSVLLTKEPPAIGALQCFDAALATGTKDGIVRLWDL 584
+ TI N + K G+ L T + D ++W
Sbjct: 470 QPVYTIPAH--------------TNLISDVKYQQECGSF------LVTCSYDSTTKIWSN 509
Query: 585 RSGKVVRMLEGHTDAITSLQF--DSVNLVTGAMDRSIRIW 622
++ + ++ L+GH + + S+ +S + T + DR+ ++W
Sbjct: 510 KTWQPLKTLQGHDNKVISVDIAPNSQYIATTSFDRTFKLW 549
Score = 66.2 bits (160), Expect = 2e-10
Identities = 61/263 (23%), Positives = 105/263 (39%), Gaps = 59/263 (22%)
Query: 423 KVWDLSKKKQIATLHGHLASISCMQI--------DQYSTLITGGRDAVLKLWDIDKAMAD 474
K+W + + TL GH + + + + + + +GG D +KLW +
Sbjct: 286 KLWSVPDCELKQTLRGHASYVGGVALRPGVKADEENVVAMASGGHDGAVKLWGFN----- 340
Query: 475 EASNSSEDNDACLYTFDSHVDEITAISFDGDNLVSGSQDRTVRQWDLNSGKCTQTIDISF 534
+E++ A + H A G L + D + R WDL Q ++
Sbjct: 341 -----NEESIADITGHMPHRVSKVAFHPSGRFLATACYDSSWRLWDLE-----QKTEVLH 390
Query: 535 ATGPMRSQRNIPLRNSVLLTKEPPAIGALQCFDAALATGTKDGIVRLWDLRSGKVVRMLE 594
G + + + + L TG D R+WDLR+G+ + LE
Sbjct: 391 QEGHAKPVHCLSYHSD----------------GSVLVTGGLDAFGRVWDLRTGRCIMFLE 434
Query: 595 GHTDAITSLQF--DSVNLVTGAMDRSIRIWDLR-----------TGILSDVFAYEQPITS 641
GH A+ + F + ++ TG+ D + +IWDLR T ++SDV Y+Q S
Sbjct: 435 GHLGAVFGVDFSPNGFHIATGSQDNTCKIWDLRRRQPVYTIPAHTNLISDV-KYQQECGS 493
Query: 642 LHFDLDKIVISNNEPTVKIYNRK 664
+V + + T KI++ K
Sbjct: 494 F------LVTCSYDSTTKIWSNK 510
>Hs13994164_1 [R] KOG0274 Cdc4 and related F-box and WD-40 proteins
Length = 756
Score = 73.2 bits (178), Expect = 1e-12
Identities = 52/226 (23%), Positives = 99/226 (43%), Gaps = 39/226 (17%)
Query: 415 AGSLDHSVKVWDLSKKKQIAT-LHGHLASISCMQI-DQYSTLITGGRDAVLKLWDIDKAM 472
A S + + + D+ + K I GH S+ + + ++ + L++G D ++ WD+ +
Sbjct: 427 AVSSNRKIHLLDIIQVKAIPVEFRGHAGSVRALFLCEEENFLLSGSYDLSIRYWDLKSGV 486
Query: 473 ADEASNSSEDNDACLYTFDSHVDEITAISFDGDNLVSGSQDRTVRQWDLNSGKCTQTIDI 532
C F H IT + + LVSG +D V+ WD+++GKC +T
Sbjct: 487 -------------CTRIFGGHQGTITCMDLCKNRLVSGGRDCQVKVWDVDTGKCLKTFR- 532
Query: 533 SFATGPMRSQRNIPLRNSVLLTKEPPAIGALQCFDAALATGTKDGIVRLWDLRSGKVVRM 592
K+P I A + D + + + G+V++W + ++V+
Sbjct: 533 ---------------------HKDP--ILATRINDTYIVSSCERGLVKVWHIAMAQLVKT 569
Query: 593 LEGHTDAITSLQFDSVNLVTGAMDRSIRIWDLRTGILSDVFAYEQP 638
L GH A+ L FD +L++G+ D + W + + A++ P
Sbjct: 570 LSGHEGAVKCLFFDQWHLLSGSTDGLVMAWSMVGKYERCLMAFKHP 615
Score = 61.2 bits (147), Expect = 5e-09
Identities = 36/136 (26%), Positives = 64/136 (46%), Gaps = 2/136 (1%)
Query: 570 LATGTKDGIVRLWDLRSGKVVRMLEGHTDAITSLQFDSVNLVTGAMDRSIRIWDLRTGIL 629
L +G+ D +R WDL+SG R+ GH IT + LV+G D +++WD+ TG
Sbjct: 468 LLSGSYDLSIRYWDLKSGVCTRIFGGHQGTITCMDLCKNRLVSGGRDCQVKVWDVDTGKC 527
Query: 630 SDVFAYEQPITSLHFDLDKIVISNNEPTVKIYNRKDGNHWFCGEDDPEQGNVDFVRYKHG 689
F ++ PI + + IV S VK+++ +G V + +
Sbjct: 528 LKTFRHKDPILATRINDTYIVSSCERGLVKVWHIAMAQ--LVKTLSGHEGAVKCLFFDQW 585
Query: 690 YLVEGRSNGDINTWAI 705
+L+ G ++G + W++
Sbjct: 586 HLLSGSTDGLVMAWSM 601
>YPL151c [A] KOG0285 Pleiotropic regulator 1
Length = 451
Score = 72.8 bits (177), Expect = 2e-12
Identities = 65/292 (22%), Positives = 124/292 (42%), Gaps = 47/292 (16%)
Query: 388 KITSLPKAHDEDITCLDFDMPFGTMCSAGSLDHSVKVWDLSKKKQIATLHGHLASISCMQ 447
K++ + H + C+ D GS D ++KVWDL+ K TL GH+ ++ +
Sbjct: 130 KLSRVINGHLGWVRCVAIDPVDNEWFITGSNDTTMKVWDLATGKLKTTLAGHVMTVRDVA 189
Query: 448 I-DQYSTLITGGRDAVLKLWDIDKAMADEASNSSEDNDACLYTFDSHVDEITAISFDG-- 504
+ D++ L + D +K WD++K + + + H+ + +S
Sbjct: 190 VSDRHPYLFSVSEDKTVKCWDLEK-------------NQIIRDYYGHLSGVRTVSIHPTL 236
Query: 505 DNLVSGSQDRTVRQWDLNSGKCTQTIDISFATGPMRSQRNIPLRNSVLLTKEPPAIGALQ 564
D + + +D ++ WD+ + IP+ + L I +Q
Sbjct: 237 DLIATAGRDSVIKLWDMRT--------------------RIPV---ITLVGHKGPINQVQ 273
Query: 565 C--FDAALATGTKDGIVRLWDLRSGKVVRMLEGHTDAI--TSLQFDSVNLVTGAMDRSIR 620
C D + + + D VRLWD+ +GK +++L H ++ T+L ++ + D IR
Sbjct: 274 CTPVDPQVVSSSTDATVRLWDVVAGKTMKVLTHHKRSVRATALHPKEFSVASACTD-DIR 332
Query: 621 IWDLRTGILSDVFAYEQP--ITSLHFDLDKIVISNNEPTV-KIYNRKDGNHW 669
W L G L F E+ I +L + D ++ + + V Y+ K G+ +
Sbjct: 333 SWGLAEGSLLTNFESEKTGIINTLSINQDDVLFAGGDNGVLSFYDYKSGHKY 384
>ECU01g1300 [R] KOG0274 Cdc4 and related F-box and WD-40 proteins
Length = 423
Score = 72.8 bits (177), Expect = 2e-12
Identities = 52/202 (25%), Positives = 92/202 (44%), Gaps = 39/202 (19%)
Query: 428 SKKKQIATLHGHLASISCMQIDQYSTLITGGRDAVLKLWDIDKAMADEASNSSEDNDACL 487
S+ ++ + + I+ MQID+ + D +K++ +D + +
Sbjct: 103 SRNERSVDFETNQSDITFMQIDK-DKVACSSDDQTIKIFGMDGRL--------------I 147
Query: 488 YTFDSHVDEITAISFDGDNLVSGSQDRTVRQWDLNSGKCTQTIDISFATGPMRSQRNIPL 547
TF H + F+ LVSGS D+T R WDL +G CT + I +
Sbjct: 148 RTFVGHKGGVWTFMFNDKYLVSGSTDKTARIWDLWTG-CTLCVLIGHKS----------- 195
Query: 548 RNSVLLTKEPPAIGALQCFDAALATGTKDGIVRLWDLRSGKVVRMLEGHTDAITSLQFDS 607
+ +L+ +D +ATG++D +R+W+ R G + +L+GHT ++ +
Sbjct: 196 -----------VVRSLKIYDDYIATGSRDAEIRIWNFR-GTCLNVLKGHTMSVRCMDMGE 243
Query: 608 VNLVTGAMDRSIRIWDLRTGIL 629
LV+G+ D S+ +WD R G L
Sbjct: 244 SYLVSGSYDGSVALWDYRRGKL 265
Score = 58.5 bits (140), Expect = 3e-08
Identities = 65/258 (25%), Positives = 107/258 (41%), Gaps = 48/258 (18%)
Query: 415 AGSLDHSVKVWDLSKKKQIATLHGHLASISCMQI-DQYSTLITGGRDAVLKLWDIDKAMA 473
+GS D + ++WDL + L GH + + ++I D Y + TG RDA +++W+
Sbjct: 169 SGSTDKTARIWDLWTGCTLCVLIGHKSVVRSLKIYDDY--IATGSRDAEIRIWNF----- 221
Query: 474 DEASNSSEDNDACLYTFDSHVDEITAISFDGDNLVSGSQDRTVRQWDLNSGKCTQTIDIS 533
CL H + + LVSGS D +V WD GK
Sbjct: 222 ---------RGTCLNVLKGHTMSVRCMDMGESYLVSGSYDGSVALWDYRRGKL------- 265
Query: 534 FATGPMRSQRNIPLR-NSVLLTKEPPAIGALQCFDAALATGTKDGIVRLWDLRSGKVVRM 592
+R + LR SV L+ A G+L D+++ T DG ++ S ++ R
Sbjct: 266 -----LRYLKPHSLRVYSVSLSSSYVASGSL---DSSVHVSTLDGKLQC----SYRIHRS 313
Query: 593 LEGHTDAITSLQFDSVNLVTGAMDRSIRIWDLRTGILSDVFAY---EQPITSLHFDLDKI 649
L + S +F L++ D + WD +L + Y E + ++ +
Sbjct: 314 LVIWLKFVGSGRF----LLSSGADGILCKWD----VLENALVYKIEESGHITAQAVIEDL 365
Query: 650 VISNNEPTVKIYNRKDGN 667
+I + VKIYN DG+
Sbjct: 366 LIVGTKREVKIYNLSDGS 383
>Hs22064139 [R] KOG0288 WD40 repeat protein TipD
Length = 619
Score = 72.4 bits (176), Expect = 2e-12
Identities = 61/247 (24%), Positives = 110/247 (43%), Gaps = 48/247 (19%)
Query: 395 AHDEDITCLDFDMPFGTMCSAGSLDHSVKVWDL--SKKKQIATLHGHLASISCMQIDQ-- 450
AH ++ + F P ++ + G D + +W++ S+ + TL G SI+ + D
Sbjct: 334 AHLSEVNAVRFG-PNSSLLATGGADRLIHLWNVVGSRLEANQTLEGAGGSITSVDFDPSG 392
Query: 451 YSTLITGGRDAVLKLWDIDKAMADEASNSSEDNDACLYTFDSHVDEITAISFD--GDNLV 508
Y L A +LW + +A + E T H D++TA F V
Sbjct: 393 YQVLAATYNQAA-QLWKVGEAQSKE-------------TLSGHKDKVTAAKFKLTRHQAV 438
Query: 509 SGSQDRTVRQWDLNSGKCTQTIDISFATGPMRSQRNIPLRNSVLLTKEPPAIGALQCFDA 568
+GS+DRTV++WDL C++TI++ + N V+ C D
Sbjct: 439 TGSRDRTVKEWDLGRAYCSRTINV------------LSYCNDVV------------CGDH 474
Query: 569 ALATGTKDGIVRLWDLRSGKVVRML--EGHTDAITSLQFDSVNLVTGAMDRSIRIWDLRT 626
+ +G D +R WD R +++ +G ++ SL D ++L++ + D ++++ DLR
Sbjct: 475 IIISGHNDQKIRFWDSRGPHCTQVIPVQGRVTSL-SLSHDQLHLLSCSRDNTLKVIDLRV 533
Query: 627 GILSDVF 633
+ VF
Sbjct: 534 SNIRQVF 540
>Hs19913371 [B] KOG0273 Beta-transducin family (WD-40 repeat) protein
Length = 514
Score = 72.4 bits (176), Expect = 2e-12
Identities = 70/267 (26%), Positives = 115/267 (42%), Gaps = 49/267 (18%)
Query: 397 DEDITCLDFDMPFGTMCSAGSLDHSVKVWDLSKKKQIA-TLHGHLASISCMQIDQYSTLI 455
++D+T LD++ GT+ + GS D ++W +K +A TL H I ++ ++ I
Sbjct: 225 NKDVTSLDWNSE-GTLLATGSYDGFARIW--TKDGNLASTLGQHKGPIFALKWNKKGNFI 281
Query: 456 -TGGRDAVLKLWDIDKAMA--------------DEASNS---SEDNDACLY--------- 488
+ G D +WD A D SN+ S D C++
Sbjct: 282 LSAGVDKTTIIWDAHTGEAKQQFPFHSAPALDVDWQSNNTFASCSTDMCIHVCKLGQDRP 341
Query: 489 --TFDSHVDEITAISFD--GDNLVSGSQDRTVRQWDLNSGKCTQTIDISFATGPMRSQRN 544
TF H +E+ AI +D G+ L S S D T++ W + C D+ + + +
Sbjct: 342 IKTFQGHTNEVNAIKWDPTGNLLASCSDDMTLKIWSMKQDNCVH--DLQAHNKEIYTIKW 399
Query: 545 IPLRNSVLLTKEPPAIGALQCFDAALATGTKDGIVRLWDLRSGKVVRMLEGHTDAITSLQ 604
P T P A + LA+ + D VRLWD+ G + L H + + S+
Sbjct: 400 SPTGPG---TNNPNA-------NLMLASASFDSTVRLWDVDRGICIHTLTKHQEPVYSVA 449
Query: 605 F--DSVNLVTGAMDRSIRIWDLRTGIL 629
F D L +G+ D+ + IW+ +TG L
Sbjct: 450 FSPDGRYLASGSFDKCVHIWNTQTGAL 476
Score = 56.2 bits (134), Expect = 2e-07
Identities = 61/239 (25%), Positives = 93/239 (38%), Gaps = 53/239 (22%)
Query: 403 LDFDMPFGTMCSAGSLDHSVKVWDLSKKKQIATLHGHLASISCMQIDQYSTLITG-GRDA 461
LD D ++ S D + V L + + I T GH ++ ++ D L+ D
Sbjct: 312 LDVDWQSNNTFASCSTDMCIHVCKLGQDRPIKTFQGHTNEVNAIKWDPTGNLLASCSDDM 371
Query: 462 VLKLWDIDKAMADEASNSSEDNDACLYTFDSHVDEITAISFD----GDN-------LVSG 510
LK+W + + D C++ +H EI I + G N L S
Sbjct: 372 TLKIWSMKQ-------------DNCVHDLQAHNKEIYTIKWSPTGPGTNNPNANLMLASA 418
Query: 511 SQDRTVRQWDLNSGKCTQTIDISFATGPMRSQRNIPLRNSVLLTK--EPPAIGALQCFDA 568
S D TVR WD++ G C T LTK EP A
Sbjct: 419 SFDSTVRLWDVDRGICIHT-----------------------LTKHQEPVYSVAFSPDGR 455
Query: 569 ALATGTKDGIVRLWDLRSGKVVRMLEGHTDAITSLQFDSVNLVTG--AMDRSIRIWDLR 625
LA+G+ D V +W+ ++G +V G T I + +++ G A D S+ + DLR
Sbjct: 456 YLASGSFDKCVHIWNTQTGALVHSYRG-TGGIFEVCWNAAGDKVGASASDGSVCVLDLR 513
>Hs16445438 [R] KOG0644 Uncharacterized conserved protein contains WD40 repeat
and BROMO domains
Length = 2269
Score = 72.4 bits (176), Expect = 2e-12
Identities = 78/303 (25%), Positives = 134/303 (43%), Gaps = 61/303 (20%)
Query: 396 HDEDITCLDFDMPFGTMCSAGSLDHSVKVWDLSKKKQIATLHGHLASISCMQIDQYSTLI 455
H + C+ FD G GS D VK+W + ++TL GH A IS M ++ +T+I
Sbjct: 185 HLSAVYCVAFDRT-GHRIFTGSDDCLVKIWSTHNGRLLSTLRGHSAEISDMAVNYENTMI 243
Query: 456 TGGR-DAVLKLWDIDKAMADEASNSSEDNDACLYTFDSHVDEITAISFD----GDN--LV 508
G D ++++W + A + H IT++ F G +V
Sbjct: 244 AAGSCDKIIRVWCLRTC-------------APVAVLQGHTGSITSLQFSPMAKGSQRYMV 290
Query: 509 SGSQDRTV--RQWDLNSGKCTQTIDISFATGPMRSQRNIPLRNSVLLTKEPPAIGALQCF 566
S D TV QWDL S + F+ P++ R V + ++G +
Sbjct: 291 STGADGTVCFWQWDLES--------LKFSPRPLKFTEK--PRPGVQMLCSSFSVGGM--- 337
Query: 567 DAALATGTKDGIVRLWDL--RSGKVVRMLEGHTDAITSLQF--DSVNLVTGAMDRSIRIW 622
LATG+ D ++R++ L + + + LE HTD + S+QF + ++G+ D + RIW
Sbjct: 338 --FLATGSTDHVIRMYFLGFEAPEKIAELESHTDKVDSIQFCNNGDRFLSGSRDGTARIW 395
Query: 623 ------------DLRTGILSDVFAYEQ-----PITSLHFDL-DKIVISN-NEPTVKIYNR 663
D+ T I D+ + E+ +T + ++ D IV++ N+ +K++N
Sbjct: 396 RFEQLEWRSILLDMATRISGDLSSEEERFMKPKVTMIAWNQNDSIVVTAVNDHVLKVWNS 455
Query: 664 KDG 666
G
Sbjct: 456 YTG 458
Score = 71.2 bits (173), Expect = 5e-12
Identities = 67/292 (22%), Positives = 122/292 (40%), Gaps = 61/292 (20%)
Query: 388 KITSLPKAHDEDITCLDFDMPFGTMCSAGSLDHSVKVWDLSKKKQIATLHGHLASISCMQ 447
++ S + H +I+ + + TM +AGS D ++VW L +A L GH SI+ +Q
Sbjct: 219 RLLSTLRGHSAEISDMAVNYE-NTMIAAGSCDKIIRVWCLRTCAPVAVLQGHTGSITSLQ 277
Query: 448 IDQYST-----LITGGRDAVLKLWDIDKAMADEA-------------------------- 476
+ +++ G D + W D +
Sbjct: 278 FSPMAKGSQRYMVSTGADGTVCFWQWDLESLKFSPRPLKFTEKPRPGVQMLCSSFSVGGM 337
Query: 477 --SNSSEDNDACLY-----------TFDSHVDEITAISF--DGDNLVSGSQDRTVRQWDL 521
+ S D+ +Y +SH D++ +I F +GD +SGS+D T R W
Sbjct: 338 FLATGSTDHVIRMYFLGFEAPEKIAELESHTDKVDSIQFCNNGDRFLSGSRDGTARIWRF 397
Query: 522 NSGKCTQTIDISFAT---GPMRSQRNIPLRNSVLLTKEPPAIGALQCFDAALATGTKDGI 578
+ ++I + AT G + S+ ++ V + A D+ + T D +
Sbjct: 398 EQLEW-RSILLDMATRISGDLSSEEERFMKPKVTMI-------AWNQNDSIVVTAVNDHV 449
Query: 579 VRLWDLRSGKVVRMLEGHTDAITSLQ---FDSVNLVTGAMDRSIRIWDLRTG 627
+++W+ +G+++ L GH D + L+ FDS +++ D SI IWD+ G
Sbjct: 450 LKVWNSYTGQLLHNLMGHADEVFVLETHPFDSRIMLSAGHDGSIFIWDITKG 501
>Hs16445436 [R] KOG0644 Uncharacterized conserved protein contains WD40 repeat
and BROMO domains
Length = 2320
Score = 72.4 bits (176), Expect = 2e-12
Identities = 78/303 (25%), Positives = 134/303 (43%), Gaps = 61/303 (20%)
Query: 396 HDEDITCLDFDMPFGTMCSAGSLDHSVKVWDLSKKKQIATLHGHLASISCMQIDQYSTLI 455
H + C+ FD G GS D VK+W + ++TL GH A IS M ++ +T+I
Sbjct: 185 HLSAVYCVAFDRT-GHRIFTGSDDCLVKIWSTHNGRLLSTLRGHSAEISDMAVNYENTMI 243
Query: 456 TGGR-DAVLKLWDIDKAMADEASNSSEDNDACLYTFDSHVDEITAISFD----GDN--LV 508
G D ++++W + A + H IT++ F G +V
Sbjct: 244 AAGSCDKIIRVWCLRTC-------------APVAVLQGHTGSITSLQFSPMAKGSQRYMV 290
Query: 509 SGSQDRTV--RQWDLNSGKCTQTIDISFATGPMRSQRNIPLRNSVLLTKEPPAIGALQCF 566
S D TV QWDL S + F+ P++ R V + ++G +
Sbjct: 291 STGADGTVCFWQWDLES--------LKFSPRPLKFTEK--PRPGVQMLCSSFSVGGM--- 337
Query: 567 DAALATGTKDGIVRLWDL--RSGKVVRMLEGHTDAITSLQF--DSVNLVTGAMDRSIRIW 622
LATG+ D ++R++ L + + + LE HTD + S+QF + ++G+ D + RIW
Sbjct: 338 --FLATGSTDHVIRMYFLGFEAPEKIAELESHTDKVDSIQFCNNGDRFLSGSRDGTARIW 395
Query: 623 ------------DLRTGILSDVFAYEQ-----PITSLHFDL-DKIVISN-NEPTVKIYNR 663
D+ T I D+ + E+ +T + ++ D IV++ N+ +K++N
Sbjct: 396 RFEQLEWRSILLDMATRISGDLSSEEERFMKPKVTMIAWNQNDSIVVTAVNDHVLKVWNS 455
Query: 664 KDG 666
G
Sbjct: 456 YTG 458
Score = 71.2 bits (173), Expect = 5e-12
Identities = 67/292 (22%), Positives = 122/292 (40%), Gaps = 61/292 (20%)
Query: 388 KITSLPKAHDEDITCLDFDMPFGTMCSAGSLDHSVKVWDLSKKKQIATLHGHLASISCMQ 447
++ S + H +I+ + + TM +AGS D ++VW L +A L GH SI+ +Q
Sbjct: 219 RLLSTLRGHSAEISDMAVNYE-NTMIAAGSCDKIIRVWCLRTCAPVAVLQGHTGSITSLQ 277
Query: 448 IDQYST-----LITGGRDAVLKLWDIDKAMADEA-------------------------- 476
+ +++ G D + W D +
Sbjct: 278 FSPMAKGSQRYMVSTGADGTVCFWQWDLESLKFSPRPLKFTEKPRPGVQMLCSSFSVGGM 337
Query: 477 --SNSSEDNDACLY-----------TFDSHVDEITAISF--DGDNLVSGSQDRTVRQWDL 521
+ S D+ +Y +SH D++ +I F +GD +SGS+D T R W
Sbjct: 338 FLATGSTDHVIRMYFLGFEAPEKIAELESHTDKVDSIQFCNNGDRFLSGSRDGTARIWRF 397
Query: 522 NSGKCTQTIDISFAT---GPMRSQRNIPLRNSVLLTKEPPAIGALQCFDAALATGTKDGI 578
+ ++I + AT G + S+ ++ V + A D+ + T D +
Sbjct: 398 EQLEW-RSILLDMATRISGDLSSEEERFMKPKVTMI-------AWNQNDSIVVTAVNDHV 449
Query: 579 VRLWDLRSGKVVRMLEGHTDAITSLQ---FDSVNLVTGAMDRSIRIWDLRTG 627
+++W+ +G+++ L GH D + L+ FDS +++ D SI IWD+ G
Sbjct: 450 LKVWNSYTGQLLHNLMGHADEVFVLETHPFDSRIMLSAGHDGSIFIWDITKG 501
>ECU02g1400 [A] KOG0284 Polyadenylation factor I complex subunit PFS2
Length = 408
Score = 72.4 bits (176), Expect = 2e-12
Identities = 58/235 (24%), Positives = 104/235 (43%), Gaps = 40/235 (17%)
Query: 394 KAHDEDITCLDFDMPFGTMCSAGSLDHSVKVWDLSKKKQIATLHGHLASISCMQIDQYST 453
+ H E + L F CSA D ++K+WD + K+ + L GH + Q +Y +
Sbjct: 177 QGHTEAVRDLSFSHNDSKFCSASD-DSTIKIWDSIEAKEESVLRGHNWDVRAAQWHKYKS 235
Query: 454 LI-TGGRDAVLKLWDIDKAMADEASNSSEDNDACLYTFDSHVDEITAISFDGDN--LVSG 510
LI + G+D ++K+WD ++E+ L T H + I A+ + GD L++G
Sbjct: 236 LIASAGKDNLVKMWD---------PRTAEE----LCTLHHHKNTILALKWMGDENYLLTG 282
Query: 511 SQDRTVRQWDLNSGKCTQTIDISFATGPMRSQRNIPLRNSVLLTKEPPAIGALQCFDAAL 570
+D+ ++ D+ T T ++ KE +IG C
Sbjct: 283 GKDQVIKMVDIR----TMTDVFTYKNHK----------------KEVTSIGTHPCIPDIF 322
Query: 571 ATGTKDGIVRLWDLRSGKVVRMLE-GHTDAITSLQFDSVN--LVTGAMDRSIRIW 622
+G +G + W + + ++E GH + SL + V L +G++D+S+R W
Sbjct: 323 VSGGTEGGIYFWQAYTQVPLEVIEEGHEGTVWSLDYHPVGHILASGSVDQSVRFW 377
>7302720 [R] KOG0266 WD40 repeat-containing protein
Length = 307
Score = 72.4 bits (176), Expect = 2e-12
Identities = 49/174 (28%), Positives = 87/174 (49%), Gaps = 24/174 (13%)
Query: 478 NSSEDNDACLYTFDSHVDEITAISF--DGDNLVSGSQDRTVRQWDLNSGKCTQTI----- 530
NS A ++ H +T + F +G+NLVS S DR ++ WDL++ +C Q++
Sbjct: 40 NSMSPGYAIKHSLLGHSGCVTGLKFSSNGENLVSSSGDRLLKLWDLSATRCIQSLAGHGD 99
Query: 531 ---DISFATGPMRSQRNIPLRNSVLLTKEPPAIGALQ---------CFDAA---LATGTK 575
D++++ + + + + + + + L+ CF+ LA+ +
Sbjct: 100 GVNDVAWSAAGLIASCSDDMTVRLWDARSKLCVKVLEGHSRYSFSCCFNPQANLLASTSF 159
Query: 576 DGIVRLWDLRSGKVVRMLEGHTDAITSLQF--DSVNLVTGAMDRSIRIWDLRTG 627
D VRLWD+R+GK ++++ H D ITS+ F D VT + D +R+WD TG
Sbjct: 160 DETVRLWDVRTGKTLKIVHAHQDPITSVDFHRDGNIFVTSSYDGLVRLWDSSTG 213
Score = 63.5 bits (153), Expect = 1e-09
Identities = 57/217 (26%), Positives = 94/217 (43%), Gaps = 43/217 (19%)
Query: 419 DHSVKVWDLSKKKQIATLHGHLA-SISCMQIDQYSTLITGGRDAVLKLWDIDKAMADEAS 477
D +V++WD K + L GH S SC Q + L + D ++LWD+
Sbjct: 118 DMTVRLWDARSKLCVKVLEGHSRYSFSCCFNPQANLLASTSFDETVRLWDVRTGKT---- 173
Query: 478 NSSEDNDACLYTFDSHVDEITAISF--DGDNLVSGSQDRTVRQWDLNSGKCTQT-IDISF 534
L +H D IT++ F DG+ V+ S D VR WD ++G +T +D+
Sbjct: 174 ---------LKIVHAHQDPITSVDFHRDGNIFVTSSYDGLVRLWDSSTGHVLKTLVDVD- 223
Query: 535 ATGPMRSQRNIPLRNSVLLTKEPPAIGALQCFDAALATGTKDGIVRLWDLRSGKVVRMLE 594
NIP V K P + + T + +RLW+ + K +R
Sbjct: 224 ---------NIP----VGYVKFSPN-------GRYILSSTLNNTLRLWNYKKPKCMRTYR 263
Query: 595 GHTDAI--TSLQFDSVN---LVTGAMDRSIRIWDLRT 626
GH + ++ F + +V+G+ D ++ IW+L+T
Sbjct: 264 GHLNEFYCSNSNFSTTGGIWIVSGSEDNTLCIWNLQT 300
>At1g15440 [A] KOG0291 WD40-repeat-containing subunit of the 18S rRNA
processing complex
Length = 900
Score = 72.0 bits (175), Expect = 3e-12
Identities = 71/278 (25%), Positives = 110/278 (39%), Gaps = 56/278 (20%)
Query: 424 VWDLSKKKQIATLHGHLASISCMQIDQYSTLI-TGGRDAVLKLWDIDKAMADEASNSSED 482
VWD + I GH ++C+ S L+ TG D +K+W++
Sbjct: 373 VWDWRTETYILKQQGHYFDVNCVTYSPDSQLLATGADDNKVKVWNVMSG----------- 421
Query: 483 NDACLYTFDSHVDEITAISFDGDN--LVSGSQDRTVRQWDLNSGKCTQTIDISFATGPMR 540
C TF H + +TA+ F DN L+S S D TVR WD K +T T P
Sbjct: 422 --TCFITFTEHTNAVTALHFMADNHSLLSASLDGTVRAWDFKRYKNYKTY-----TTPTP 474
Query: 541 SQRNIPLRNSVLLTKEPPAIGALQCFDAALATGTKDGI-VRLWDLRSGKVVRMLEGHTDA 599
R V LT +P G + C GT D + +W ++G++ +L GH
Sbjct: 475 -------RQFVSLTADPS--GDVVC------AGTLDSFEIFVWSKKTGQIKDILSGHEAP 519
Query: 600 ITSLQFDSVN--LVTGAMDRSIRIWDLRTGILSDVFAYEQPITSLHFDLDKIVISNNEPT 657
+ L F + L + + D ++R+W DVFA + + + +N
Sbjct: 520 VHGLMFSPLTQLLASSSWDYTVRLW--------DVFASKGTVETFR---------HNHDV 562
Query: 658 VKIYNRKDGNHWFCGEDDPEQGNVDFVRYKHGYLVEGR 695
+ + R DG D + D + Y +EGR
Sbjct: 563 LTVAFRPDGKQLASSTLDGQINFWDTIEGVLMYTIEGR 600
>Hs4758560 [A] KOG0265 U5 snRNP-specific protein-like factor and related
proteins
Length = 357
Score = 71.6 bits (174), Expect = 4e-12
Identities = 61/254 (24%), Positives = 104/254 (40%), Gaps = 55/254 (21%)
Query: 410 GTMCSAGSLDHSVKVWDLSKKKQIATLHGHLASI-SCMQIDQYSTLI-TGGRDAVLKLWD 467
G+M + S D +V VWD +++ L GH + + SC + L+ TG D +KLWD
Sbjct: 121 GSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARKSPQLVCTGSDDGTVKLWD 180
Query: 468 IDKAMA-------------------DEASNSSEDND---------ACLYTFDSHVDEITA 499
I K A D+ + DND YT H D +T
Sbjct: 181 IRKKAAIQTFQNTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMRGHADSVTG 240
Query: 500 ISF--DGDNLVSGSQDRTVRQWDLNSGKCTQTIDISFATGPMRSQRNIPLRNSVLLTKEP 557
+S +G L+S + D TVR WD+ + F ++N+
Sbjct: 241 LSLSSEGSYLLSNAMDNTVRVWDVRPFAPKERCVKIFQGNVHNFEKNL------------ 288
Query: 558 PAIGALQCF----DAALATGTKDGIVRLWDLRSGKVVRMLEGHTDAITSLQF--DSVNLV 611
L+C + +A G+ D V +WD S +++ L GH +I + F D ++
Sbjct: 289 -----LRCSWSPDGSKIAAGSADRFVYVWDTTSRRILYKLPGHAGSINEVAFHPDEPIII 343
Query: 612 TGAMDRSIRIWDLR 625
+ + D+ + + +++
Sbjct: 344 SASSDKRLYMGEIQ 357
Score = 67.0 bits (162), Expect = 9e-11
Identities = 61/222 (27%), Positives = 94/222 (41%), Gaps = 34/222 (15%)
Query: 428 SKKKQIATLHGHLASISCMQIDQY-STLITGGRDAVLKLWDIDKAMADEASNSSEDNDAC 486
S + I L GH + C + STL + G D ++ LW++ DN A
Sbjct: 54 SLQAPIMLLSGHEGEVYCCKFHPNGSTLASAGFDRLILLWNV---------YGDCDNYAT 104
Query: 487 LYTFDSHVDEITAISFDGDNLVSGSQDRTVRQWDLNSGKCTQTI--DISFATG--PMRSQ 542
L V E+ + DG L S S D+TV WD +G+ + + SF P R
Sbjct: 105 LKGHSGAVMELH-YNTDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARKS 163
Query: 543 RNIPLRNS------VLLTKEPPAIGALQCFDAALA-----------TGTKDGIVRLWDLR 585
+ S + ++ AI Q LA +G D +++WDLR
Sbjct: 164 PQLVCTGSDDGTVKLWDIRKKAAIQTFQNTYQVLAVTFNDTSDQIISGGIDNDIKVWDLR 223
Query: 586 SGKVVRMLEGHTDAITSLQFDSVN--LVTGAMDRSIRIWDLR 625
K+ + GH D++T L S L++ AMD ++R+WD+R
Sbjct: 224 QNKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWDVR 265
>Hs22047819 [R] KOG0274 Cdc4 and related F-box and WD-40 proteins
Length = 880
Score = 71.6 bits (174), Expect = 4e-12
Identities = 55/213 (25%), Positives = 89/213 (40%), Gaps = 33/213 (15%)
Query: 428 SKKKQIATLHGHLASISCMQIDQYSTLITGGRDAVLKLWDIDKAMADEASNSSEDNDACL 487
S++ I + GH + ++ Q++ + T D ++ WD+ CL
Sbjct: 236 SREAGIVPIPGHESYVTFCQLEDEAAF-TCSADCTIRRWDVLTGQ-------------CL 281
Query: 488 YTFDSHVDEITAISFDGDNLVSGSQDRTVRQWDLNSGKCTQTIDISFATGPMRSQRNIPL 547
+ H + I + L S S DRT R W ++ G+ ++ R RN L
Sbjct: 282 QVYRGHTSIVNRILVANNQLFSSSYDRTARVWSVDKGQMSREF---------RGHRNCVL 332
Query: 548 RNSVLLTKEPPAIGALQCFDAA-----LATGTKDGIVRLWDLRSGKVVRMLEGHTDAITS 602
L P + + C + A L TG+ DG ++W + SG + L GHT A+
Sbjct: 333 ---TLAYSAPWDLPSTPCAEEAAAGGLLVTGSTDGTAKVWQVASGCCHQTLRGHTGAVLC 389
Query: 603 LQFDSV--NLVTGAMDRSIRIWDLRTGILSDVF 633
L D+ TG+ D +IR WD+ +G VF
Sbjct: 390 LVLDTPGHTAFTGSTDATIRAWDILSGEQLRVF 422
Score = 69.3 bits (168), Expect = 2e-11
Identities = 57/252 (22%), Positives = 104/252 (40%), Gaps = 56/252 (22%)
Query: 394 KAHDEDITCLDFDMPFGTMCSAGSLDHSVKVWDLSKKKQIATLHGHLASISCMQI----- 448
+ H + CL D P G GS D +++ WD+ +Q+ H S+ C+++
Sbjct: 381 RGHTGAVLCLVLDTP-GHTAFTGSTDATIRAWDILSGEQLRVFREHRGSVICLELGSTLP 439
Query: 449 --DQYSTLITGGRDAVLK-------------LWDIDKAMADEASNSSEDNDACLYTFDSH 493
++ L G + +L+ +W + + A+ ++ + +H
Sbjct: 440 CPERLKGLAEGRQHTLLQKEQLALKAAKRLMVWGSAQVVTKGATGRAKHS--------AH 491
Query: 494 VDEITAISFDGDNLVSGSQDRTVRQWDLNSGKCTQTIDISFATGPMRSQRNIPLRNSVLL 553
+ + SGS DRTV+ W ++G+C +T +RN+
Sbjct: 492 RPCVLVNRL----VYSGSADRTVKCWLADTGECVRTFTAH--------RRNV-------- 531
Query: 554 TKEPPAIGALQCFDAALATGTKDGIVRLWDLRSGKVVRMLEGHTDAITSLQFDSVNLVTG 613
AL+ L TG+ D R +D +SG++ R+ GHT I +Q L T
Sbjct: 532 -------SALKYHAGTLFTGSGDACARAFDAQSGELRRVFRGHTFIINCIQVHGQVLYTA 584
Query: 614 AMDRSIRIWDLR 625
+ D ++R+WD+R
Sbjct: 585 SHDGALRLWDVR 596
Score = 54.7 bits (130), Expect = 5e-07
Identities = 49/218 (22%), Positives = 89/218 (40%), Gaps = 34/218 (15%)
Query: 396 HDEDITCLDFDMPFGTMCSAGSLDHSVKVWDLSKKKQIATLHGHLASISCMQIDQYSTLI 455
H+ +T + CSA D +++ WD+ + + GH + ++ + + + L
Sbjct: 247 HESYVTFCQLEDEAAFTCSA---DCTIRRWDVLTGQCLQVYRGHTSIVNRILVAN-NQLF 302
Query: 456 TGGRDAVLKLWDIDKAMADEASNSSEDNDACLYT------FDSHVDEITAISFDGDNLVS 509
+ D ++W +DK + S + C+ T +D + G LV+
Sbjct: 303 SSSYDRTARVWSVDKG---QMSREFRGHRNCVLTLAYSAPWDLPSTPCAEEAAAGGLLVT 359
Query: 510 GSQDRTVRQWDLNSGKCTQTIDISFATGPMRSQRNIPLRNSVLLTKEPPAIGALQCFDAA 569
GS D T + W + SG C QT+ TG + + L + P A
Sbjct: 360 GSTDGTAKVWQVASGCCHQTL--RGHTGAV-----------LCLVLDTPGHTAF------ 400
Query: 570 LATGTKDGIVRLWDLRSGKVVRMLEGHTDAITSLQFDS 607
TG+ D +R WD+ SG+ +R+ H ++ L+ S
Sbjct: 401 --TGSTDATIRAWDILSGEQLRVFREHRGSVICLELGS 436
>CE05533 [A] KOG0285 Pleiotropic regulator 1
Length = 494
Score = 71.6 bits (174), Expect = 4e-12
Identities = 58/270 (21%), Positives = 117/270 (42%), Gaps = 40/270 (14%)
Query: 388 KITSLPKAHDEDITCLDFDMPFGTMCSAGSLDHSVKVWDLSKKKQIATLHGHLASISCMQ 447
K+ + H + +D + P ++G D +K+WDL+ + +L GH++S+ ++
Sbjct: 175 KLYRVASGHTGWVRAVDVE-PGNQWFASGGADRIIKIWDLASGQLKLSLTGHISSVRAVK 233
Query: 448 ID-QYSTLITGGRDAVLKLWDIDKAMADEASNSSEDNDACLYTFDSHVDEITAISFDG-- 504
+ ++ L +GG D +K WD+ + + + + H+ + A+S
Sbjct: 234 VSPRHPFLFSGGEDKQVKCWDL-------------EYNKVIRHYHGHLSAVQALSVHPSL 280
Query: 505 DNLVSGSQDRTVRQWDLNSGKCTQTIDISFATGPMRSQRNIPLRNSVLLTKEPPAIGALQ 564
D LV+ ++D T R WD+ + + G + ++ Q
Sbjct: 281 DVLVTCARDSTARVWDMRT-----KAQVHCFAGHTNTVADV----------------VCQ 319
Query: 565 CFDAALATGTKDGIVRLWDLRSGKVVRMLEGHTDAITSLQF-DSVNLVTGAMDRSIRIWD 623
D + T + D VRLWDL +G+ + L H ++ +L +N+ A +I+ W
Sbjct: 320 SVDPQVITASHDATVRLWDLAAGRSMCTLTHHKKSVRALTIHPRLNMFASASPDNIKQWK 379
Query: 624 LRTG-ILSDVFAYEQPITSLHFDLDKIVIS 652
L G + ++ + I +L + D +V+S
Sbjct: 380 LPKGEFMQNLSGHNAIINTLSSNDDGVVVS 409
Score = 71.2 bits (173), Expect = 5e-12
Identities = 65/264 (24%), Positives = 113/264 (42%), Gaps = 46/264 (17%)
Query: 415 AGSLDHSVKVWDLSKKKQIATLHGHLASISCMQI-DQYSTLITGGRDAVLKLWDIDKAMA 473
+G D VK WDL K I HGHL+++ + + L+T RD+ ++WD+
Sbjct: 243 SGGEDKQVKCWDLEYNKVIRHYHGHLSAVQALSVHPSLDVLVTCARDSTARVWDM----- 297
Query: 474 DEASNSSEDNDACLYTFDSHVDEITAISFDGDNLVSGSQDRTVRQWDLNSGKCTQTIDIS 533
++ C + V ++ S D +++ S D TVR WDL +G+ T+
Sbjct: 298 -----RTKAQVHCFAGHTNTVADVVCQSVD-PQVITASHDATVRLWDLAAGRSMCTL--- 348
Query: 534 FATGPMRSQRNIPLRNSVLLTKEPPAIGALQCFDAALATGTKDGIVRLWDLRSGKVVRML 593
T +S R + + + + A+ + D I + W L G+ ++ L
Sbjct: 349 --THHKKSVRALTIHPRLNM----------------FASASPDNI-KQWKLPKGEFMQNL 389
Query: 594 EGHTDAITSLQF-DSVNLVTGAMDRSIRIWDLRTGI-LSDVFAYEQP--------ITSLH 643
GH I +L D +V+GA + S+ WD R+G + QP I +
Sbjct: 390 SGHNAIINTLSSNDDGVVVSGADNGSLCFWDWRSGFCFQKIQTKPQPGSIESEAGIYASC 449
Query: 644 FDLD--KIVISNNEPTVKIYNRKD 665
FD +++ + + T+K+Y D
Sbjct: 450 FDKTGLRLITAEADKTIKMYKEDD 473
Score = 54.7 bits (130), Expect = 5e-07
Identities = 45/146 (30%), Positives = 68/146 (45%), Gaps = 25/146 (17%)
Query: 493 HVDEITAISFDGDN--LVSGSQDRTVRQWDLNSGKCTQTIDISFATGPMRSQRNIPLRNS 550
H + A+ + N SG DR ++ WDL SG+ ++ TG + S R +
Sbjct: 183 HTGWVRAVDVEPGNQWFASGGADRIIKIWDLASGQLKLSL-----TGHISSVR------A 231
Query: 551 VLLTKEPPAIGALQCFDAALATGTKDGIVRLWDLRSGKVVRMLEGHTDAITSLQ-FDSVN 609
V ++ P L +G +D V+ WDL KV+R GH A+ +L S++
Sbjct: 232 VKVSPRHPF----------LFSGGEDKQVKCWDLEYNKVIRHYHGHLSAVQALSVHPSLD 281
Query: 610 -LVTGAMDRSIRIWDLRTGILSDVFA 634
LVT A D + R+WD+RT FA
Sbjct: 282 VLVTCARDSTARVWDMRTKAQVHCFA 307
>Hs19913369 [A] KOG0319 WD40-repeat-containing subunit of the 18S rRNA
processing complex
Length = 808
Score = 71.2 bits (173), Expect = 5e-12
Identities = 66/297 (22%), Positives = 131/297 (43%), Gaps = 41/297 (13%)
Query: 380 QQFYDSGSKITSLPKA-HDEDITCLDFDMPFGTMCSAGSLDHSVKVWDLSKKKQIATLHG 438
Q + GS +T L KA H + + FD P T+ + G D +V+VWD+ + G
Sbjct: 92 QWAWQEGS-VTRLWKAIHTAPVATMAFD-PTSTLLATGGCDGAVRVWDIVRHYGTHHFRG 149
Query: 439 HLASISCMQIDQYST---LITGGRDAVLKLWDIDKAMADEASNSSEDNDACLYTFDSHVD 495
+ + T L + DA +++W + + +CL +H
Sbjct: 150 SPGVVHLVAFHPDPTRLLLFSSATDAAIRVWSLQ-------------DRSCLAVLTAHYS 196
Query: 496 EITAISF--DGDNLVSGSQDRTVRQWDLNSGKCTQTIDISFATGPMRSQRNIPLRNSVLL 553
+T+++F DG ++S +D+ WDL S + T+T+ + + + +VLL
Sbjct: 197 AVTSLAFSADGHTMLSSGRDKICIIWDLQSCQATRTVPVFES-----------VEAAVLL 245
Query: 554 TKEPPAIGALQCFDAALATGTKDGIVRLWDLRSGKVV---RMLEGHTDAIT--SLQFDSV 608
+EP + ++ T G +R+W+ SG+ V G +T +L +
Sbjct: 246 PEEPVSQLGVKSPGLYFLTAGDQGTLRVWEAASGQCVYTQAQPPGPGQELTHCTLAHTAG 305
Query: 609 NLVTGAMDRSIRIWDLRTGILSDVFA-YEQPITSLHF---DLDKIVISNNEPTVKIY 661
++T D ++ +++ R+ L FA Y + + + F + +V+++N P +K++
Sbjct: 306 VVLTATADHNLLLYEARSLRLQKQFAGYSEEVLDVRFLGPEDSHVVVASNSPCLKVF 362
Score = 62.0 bits (149), Expect = 3e-09
Identities = 36/141 (25%), Positives = 63/141 (44%), Gaps = 17/141 (12%)
Query: 394 KAHDEDITCLDFDMPFGTMCSAGSLDHSVKVWDLSKKKQIATLHGHLASISCMQIDQYS- 452
+ HD+DI + P + + GS D + K+W L + + + GH + C+Q
Sbjct: 476 RCHDKDINSVAI-APNDKLLATGSQDRTAKLWALPQCQLLGVFSGHRRGLWCVQFSPMDQ 534
Query: 453 TLITGGRDAVLKLWDIDKAMADEASNSSEDNDACLYTFDSHVDEITAISF--DGDNLVSG 510
L T D +KLW + + +CL TF+ H + ++F G L+S
Sbjct: 535 VLATASADGTIKLWALQ-------------DFSCLKTFEGHDASVLKVAFVSRGTQLLSS 581
Query: 511 SQDRTVRQWDLNSGKCTQTID 531
D V+ W + + +C +T+D
Sbjct: 582 GSDGLVKLWTIKNNECVRTLD 602
Score = 53.1 bits (126), Expect = 1e-06
Identities = 55/242 (22%), Positives = 100/242 (40%), Gaps = 35/242 (14%)
Query: 396 HDEDITCLDFDMPFGTMCSAGSLDHSVKVWDLSKKKQIATLHGHLASISCMQIDQYSTLI 455
+ E++ + F P + S +KV++L + LHGH + + + + L
Sbjct: 333 YSEEVLDVRFLGPEDSHVVVASNSPCLKVFEL-QTSACQILHGHTDIVLALDVFRKGWLF 391
Query: 456 TG-GRDAVLKLWDIDKAMADEASNSSEDNDACLYTFDSHVDEITAIS---FDGDNLVSGS 511
+D +++W ++KA C+ H + + LV+GS
Sbjct: 392 ASCAKDQSVRIWRMNKA----------GQVMCVAQGSGHTHSVGTVCCSRLKESFLVTGS 441
Query: 512 QDRTVRQWDLNSGKCTQTIDISFATGPMRSQRNIPLR------NSVLLTKEPPAIGALQC 565
QD TV+ W L K + + + GP+ Q R NSV +
Sbjct: 442 QDCTVKLWPLP--KALLSKNTAPDNGPILLQAQTTQRCHDKDINSVAIAPN--------- 490
Query: 566 FDAALATGTKDGIVRLWDLRSGKVVRMLEGHTDAITSLQFDSVN--LVTGAMDRSIRIWD 623
D LATG++D +LW L +++ + GH + +QF ++ L T + D +I++W
Sbjct: 491 -DKLLATGSQDRTAKLWALPQCQLLGVFSGHRRGLWCVQFSPMDQVLATASADGTIKLWA 549
Query: 624 LR 625
L+
Sbjct: 550 LQ 551
Score = 52.4 bits (124), Expect = 2e-06
Identities = 37/147 (25%), Positives = 68/147 (46%), Gaps = 25/147 (17%)
Query: 384 DSGSKITSLPKA--------HDEDITCLDFDMPFGTMCSAGSLDHSVKVWDLSKKKQIAT 435
D +K+ +LP+ H + C+ F P + + S D ++K+W L + T
Sbjct: 500 DRTAKLWALPQCQLLGVFSGHRRGLWCVQFS-PMDQVLATASADGTIKLWALQDFSCLKT 558
Query: 436 LHGHLASISCMQ-IDQYSTLITGGRDAVLKLWDIDKAMADEASNSSEDNDACLYTFDSHV 494
GH AS+ + + + + L++ G D ++KLW I N+ C+ T D+H
Sbjct: 559 FEGHDASVLKVAFVSRGTQLLSSGSDGLVKLWTI-------------KNNECVRTLDAHE 605
Query: 495 DEITAI--SFDGDNLVSGSQDRTVRQW 519
D++ + S D+ ++G+ D V W
Sbjct: 606 DKVWGLHCSRLDDHALTGASDSRVILW 632
>Hs13629793 [A] KOG0265 U5 snRNP-specific protein-like factor and related
proteins
Length = 357
Score = 71.2 bits (173), Expect = 5e-12
Identities = 61/254 (24%), Positives = 104/254 (40%), Gaps = 55/254 (21%)
Query: 410 GTMCSAGSLDHSVKVWDLSKKKQIATLHGHLASI-SCMQIDQYSTLI-TGGRDAVLKLWD 467
G+M + S D +V VWD +++ L GH + + SC + L+ TG D +KLWD
Sbjct: 121 GSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLWD 180
Query: 468 IDKAMA-------------------DEASNSSEDND---------ACLYTFDSHVDEITA 499
I K A D+ + DND YT H D +T
Sbjct: 181 IRKKAAIQTFQNTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMRGHADSVTG 240
Query: 500 ISF--DGDNLVSGSQDRTVRQWDLNSGKCTQTIDISFATGPMRSQRNIPLRNSVLLTKEP 557
+S +G L+S + D TVR WD+ + F ++N+
Sbjct: 241 LSLSSEGSYLLSNAMDNTVRVWDVRPFAPKERCVKIFQGNVHNFEKNL------------ 288
Query: 558 PAIGALQCF----DAALATGTKDGIVRLWDLRSGKVVRMLEGHTDAITSLQF--DSVNLV 611
L+C + +A G+ D V +WD S +++ L GH +I + F D ++
Sbjct: 289 -----LRCSWSPDGSKIAAGSADRFVYVWDTTSRRILYKLPGHAGSINEVAFHPDEPIII 343
Query: 612 TGAMDRSIRIWDLR 625
+ + D+ + + +++
Sbjct: 344 SASSDKRLYMGEIQ 357
Score = 67.0 bits (162), Expect = 9e-11
Identities = 62/222 (27%), Positives = 96/222 (42%), Gaps = 34/222 (15%)
Query: 428 SKKKQIATLHGHLASISCMQIDQY-STLITGGRDAVLKLWDIDKAMADEASNSSEDNDAC 486
S + I L GH + C + STL + G D ++ LW++ DN A
Sbjct: 54 SLQAPIMLLSGHEGEVYCCKFHPNGSTLASAGFDRLILLWNV---------YGDCDNYAT 104
Query: 487 LYTFDSHVDEITAISFDGDNLVSGSQDRTVRQWDLNSGKCTQTI--DISFATGPMRSQRN 544
L V E+ + DG L S S D+TV WD +G+ + + SF ++R
Sbjct: 105 LKGHSGAVMELH-YNTDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRG 163
Query: 545 IPL------RNSVLL--TKEPPAIGALQCFDAALA-----------TGTKDGIVRLWDLR 585
L +V L ++ AI Q LA +G D +++WDLR
Sbjct: 164 PQLVCTGSDDGTVKLWDIRKKAAIQTFQNTYQVLAVTFNDTSDQIISGGIDNDIKVWDLR 223
Query: 586 SGKVVRMLEGHTDAITSLQFDSVN--LVTGAMDRSIRIWDLR 625
K+ + GH D++T L S L++ AMD ++R+WD+R
Sbjct: 224 QNKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWDVR 265
>At3g05090 [S] KOG0308 Conserved WD40 repeat-containing protein
Length = 743
Score = 71.2 bits (173), Expect = 5e-12
Identities = 69/260 (26%), Positives = 96/260 (36%), Gaps = 95/260 (36%)
Query: 439 HLASISCMQI------DQYSTLITGGRDAVLKLWDIDKAMADEASNSSEDNDACLYTFDS 492
H A I+C+ + + S L TG RD LK W D ED C TF+S
Sbjct: 36 HCAGINCLDVLKSSVSNDQSYLFTGSRDGTLKRWAFD-----------EDATFCSATFES 84
Query: 493 HVDEITAISFDGDN-LVSGSQDRTVRQWD-LNSGKCTQTI-------------------- 530
HVD + + G++ LVS S D TV+ WD L+ G CT+T+
Sbjct: 85 HVDWVNDAALAGESTLVSCSSDTTVKTWDGLSDGVCTRTLRQHSDYVTCLAVAAKNNNVV 144
Query: 531 ------------DISFA-------------------TGPMRSQRNIPLRNSVLLTKEP-- 557
DI A GP+ S R + N++ + P
Sbjct: 145 ASGGLGGEVFIWDIEAALSPVTKPNDANEDSSSNGANGPVTSLRTVGSSNNISVQSSPSH 204
Query: 558 ---PAIG----------ALQCFDAALATGTKDGIVRLWDLRSGKVVRMLEGHTDAITSLQ 604
P I A+ L +G + ++R+WD R+G L GHTD + L
Sbjct: 205 GYTPTIAKGHKESVYALAMNDTGTMLVSGGTEKVLRVWDPRTGSKSMKLRGHTDNVRVLL 264
Query: 605 FDSVNLVTGAMDRSIRIWDL 624
DS R+WDL
Sbjct: 265 LDSTG----------RLWDL 274
>At1g04510 [R] KOG0289 mRNA splicing factor
Length = 535
Score = 71.2 bits (173), Expect = 5e-12
Identities = 71/281 (25%), Positives = 115/281 (40%), Gaps = 51/281 (18%)
Query: 351 ERKKHSTSKKIKDVGVSHRNRRRKTYPTLQQFYDSGSKITSLPKAHDEDITCLDFDMPFG 410
+RKK K + V + + ++P L + G I S+ H +D+
Sbjct: 202 QRKKRQIPKTLASVDALEKFTQLSSHP-LHKTNKPG--IFSMDILHSKDVI--------- 249
Query: 411 TMCSAGSLDHSVKVWDLSKKKQIATLHGHLASISCMQ-IDQYSTLITGGRDAVLKLWDID 469
+ G +D + ++D + ++TL GH ++ ++ + ++T D +++W
Sbjct: 250 ---ATGGIDTTAVLFDRPSGQILSTLTGHSKKVTSIKFVGDTDLVLTASSDKTVRIWGC- 305
Query: 470 KAMADEASNSSEDNDACLYTFDSHVDEITAISFDGDN--LVSGSQDRTVRQWDLNSGKC- 526
S + N +T H E+ A++ N VS S D T +DL+SG C
Sbjct: 306 ---------SEDGNYTSRHTLKDHSAEVRAVTVHATNKYFVSASLDSTWCFYDLSSGLCL 356
Query: 527 TQTIDISFATGPMRSQRNIPLRNSVLLTKEPPAIGALQCFDAALATGTKDGIVRLWDLRS 586
Q D S N V T A L TGT IV++WD++S
Sbjct: 357 AQVTDAS--------------ENDVNYTA-----AAFHPDGLILGTGTAQSIVKIWDVKS 397
Query: 587 GKVVRMLEGHTDAITSLQF--DSVNLVTGAMDRSIRIWDLR 625
V GH ITS+ F + L T A+D +R+WDLR
Sbjct: 398 QANVAKFGGHNGEITSISFSENGYFLATAALD-GVRLWDLR 437
>7303687 [K] KOG0263 Transcription initiation factor TFIID subunit TAF5
(also component of histone acetyltransferase SAGA)
Length = 704
Score = 71.2 bits (173), Expect = 5e-12
Identities = 59/250 (23%), Positives = 107/250 (42%), Gaps = 56/250 (22%)
Query: 417 SLDHSVKVWDLSKKKQIATLHGHLASI-SCMQIDQYSTLITGGRDAVLKLWDIDKAMADE 475
S D +V++ D + +L GH + C + + L++ D+ ++LW +
Sbjct: 427 SADINVRMLDDRSGEVTRSLMGHTGPVYRCAFAPEMNLLLSCSEDSTIRLWSLLTW---- 482
Query: 476 ASNSSEDNDACLYTFDSHVDEITAISF--DGDNLVSGSQDRTVRQWDLNSGKCTQTIDIS 533
+C+ T+ HV + + F G VS S D+T R W +S + +
Sbjct: 483 ---------SCVVTYRGHVYPVWDVRFAPHGYYFVSCSYDKTARLWATDSNQALRVF--- 530
Query: 534 FATGPMRSQRNIPLRNSVLLTKEPPAIGALQCFDAA--------LATGTKDGIVRLWDLR 585
+G L D +ATG+ D VRLWD
Sbjct: 531 --------------------------VGHLSDVDCVQFHPNSNYVATGSSDRTVRLWDNM 564
Query: 586 SGKVVRMLEGHTDAITSLQFDSVN--LVTGAMDRSIRIWDLRTG-ILSDVFAYEQPITSL 642
+G+ VR++ GH +++SL F + L +G++D +I IWDL G +++ + + +T++
Sbjct: 565 TGQSVRLMTGHKGSVSSLAFSACGRYLASGSVDHNIIIWDLSNGSLVTTLLRHTSTVTTI 624
Query: 643 HFDLDKIVIS 652
F D V++
Sbjct: 625 TFSRDGTVLA 634
Score = 65.5 bits (158), Expect = 3e-10
Identities = 48/212 (22%), Positives = 90/212 (41%), Gaps = 39/212 (18%)
Query: 417 SLDHSVKVWDLSKKKQIATLHGHLASISCMQIDQYST-LITGGRDAVLKLWDIDKAMADE 475
S D ++++W L + T GH+ + ++ + ++ D +LW
Sbjct: 469 SEDSTIRLWSLLTWSCVVTYRGHVYPVWDVRFAPHGYYFVSCSYDKTARLW--------- 519
Query: 476 ASNSSEDNDACLYTFDSHVDEITAISF--DGDNLVSGSQDRTVRQWDLNSGKCTQTIDIS 533
+ D++ L F H+ ++ + F + + + +GS DRTVR WD +G+ +
Sbjct: 520 ----ATDSNQALRVFVGHLSDVDCVQFHPNSNYVATGSSDRTVRLWDNMTGQ-----SVR 570
Query: 534 FATGPMRSQRNIPLRNSVLLTKEPPAIGALQCFDAALATGTKDGIVRLWDLRSGKVVRML 593
TG S ++ A LA+G+ D + +WDL +G +V L
Sbjct: 571 LMTGHKGSVSSL----------------AFSACGRYLASGSVDHNIIIWDLSNGSLVTTL 614
Query: 594 EGHTDAITSLQF--DSVNLVTGAMDRSIRIWD 623
HT +T++ F D L +D ++ +WD
Sbjct: 615 LRHTSTVTTITFSRDGTVLAAAGLDNNLTLWD 646
Score = 52.8 bits (125), Expect = 2e-06
Identities = 37/127 (29%), Positives = 58/127 (45%), Gaps = 11/127 (8%)
Query: 392 LPKAHDEDITCLDFDMPFGTMCSAGSLDHSVKVWDLSKKKQIATLHGHLASISCMQIDQY 451
L H ++ L F G ++GS+DH++ +WDLS + TL H ++++ + +
Sbjct: 571 LMTGHKGSVSSLAFSA-CGRYLASGSVDHNIIIWDLSNGSLVTTLLRHTSTVTTITFSRD 629
Query: 452 ST-LITGGRDAVLKLWDIDKAMADEASN------SSEDNDACLY---TFDSHVDEITAIS 501
T L G D L LWD K D SN ++ND +Y TF S ++
Sbjct: 630 GTVLAAAGLDNNLTLWDFHKVTEDYISNHITVSHHQDENDEDVYLMRTFPSKNSPFVSLH 689
Query: 502 FDGDNLV 508
F NL+
Sbjct: 690 FTRRNLL 696
>7296209 [B] KOG0273 Beta-transducin family (WD-40 repeat) protein
Length = 700
Score = 71.2 bits (173), Expect = 5e-12
Identities = 62/272 (22%), Positives = 111/272 (40%), Gaps = 59/272 (21%)
Query: 397 DEDITCLDFDMPFGTMCSAGSLDHSVKVWDLSKKKQIATLHGHLASISCMQIDQYST-LI 455
++D+T LD++ G++ + GS D ++W + + +TL H I ++ ++ ++
Sbjct: 410 NKDVTSLDWNCD-GSLLATGSYDGYARIWK-TDGRLASTLGQHKGPIFALKWNKCGNYIL 467
Query: 456 TGGRDAVLKLWDIDKAMADE--------------------ASNSSEDN--------DACL 487
+ G D +WD + AS S++ + +
Sbjct: 468 SAGVDKTTIIWDASTGQCTQQFAFHSAPALDVDWQTNQAFASCSTDQRIHVCRLGVNEPI 527
Query: 488 YTFDSHVDEITAISF--DGDNLVSGSQDRTVRQWDLNSGKCTQTIDI------SFATGPM 539
TF H +E+ AI + G L S S D T++ W +N +C + + P
Sbjct: 528 KTFKGHTNEVNAIKWCPQGQLLASCSDDMTLKIWSMNRDRCCHDLQAHSKEIYTIKWSPT 587
Query: 540 RSQRNIPLRNSVLLTKEPPAIGALQCFDAALATGTKDGIVRLWDLRSGKVVRMLEGHTDA 599
N P N +L A+ + D VRLWD+ G + L HT+
Sbjct: 588 GPGTNNPNTNLIL------------------ASASFDSTVRLWDVERGSCIHTLTKHTEP 629
Query: 600 ITSLQF--DSVNLVTGAMDRSIRIWDLRTGIL 629
+ S+ F D +L +G+ D+ + IW +TG L
Sbjct: 630 VYSVAFSPDGKHLASGSFDKCVHIWSTQTGQL 661
Score = 56.6 bits (135), Expect = 1e-07
Identities = 62/239 (25%), Positives = 92/239 (37%), Gaps = 53/239 (22%)
Query: 403 LDFDMPFGTMCSAGSLDHSVKVWDLSKKKQIATLHGHLASISCMQ-IDQYSTLITGGRDA 461
LD D ++ S D + V L + I T GH ++ ++ Q L + D
Sbjct: 497 LDVDWQTNQAFASCSTDQRIHVCRLGVNEPIKTFKGHTNEVNAIKWCPQGQLLASCSDDM 556
Query: 462 VLKLWDIDKAMADEASNSSEDNDACLYTFDSHVDEITAISFD----GDN-------LVSG 510
LK+W +++ D C + +H EI I + G N L S
Sbjct: 557 TLKIWSMNR-------------DRCCHDLQAHSKEIYTIKWSPTGPGTNNPNTNLILASA 603
Query: 511 SQDRTVRQWDLNSGKCTQTIDISFATGPMRSQRNIPLRNSVLLTK--EPPAIGALQCFDA 568
S D TVR WD+ G C T LTK EP A
Sbjct: 604 SFDSTVRLWDVERGSCIHT-----------------------LTKHTEPVYSVAFSPDGK 640
Query: 569 ALATGTKDGIVRLWDLRSGKVVRMLEGHTDAITSLQFDSVNLVTG--AMDRSIRIWDLR 625
LA+G+ D V +W ++G++V +G T I + ++S G A D S+ + DLR
Sbjct: 641 HLASGSFDKCVHIWSTQTGQLVHSYKG-TGGIFEVCWNSKGTKVGASASDGSVFVLDLR 698
Score = 52.8 bits (125), Expect = 2e-06
Identities = 63/311 (20%), Positives = 123/311 (39%), Gaps = 81/311 (26%)
Query: 394 KAHDEDITCLDFDMPFGTMCSAGSLDHSVKVWDLSKKKQIATLHGHLASISCMQ------ 447
+ H+ ++ ++ P + ++GS D + ++WD+S T L C+Q
Sbjct: 352 RGHESEVFICAWN-PSRDLLASGSGDSTARIWDMSDAN---TNSNQLVLRHCIQKGGAEV 407
Query: 448 --------ID---QYSTLITGGRDAVLKLWDIDKAMADEASNSSEDNDACLYTFDSHVDE 496
+D S L TG D ++W D +A T H
Sbjct: 408 PSNKDVTSLDWNCDGSLLATGSYDGYARIWKTDGRLAS--------------TLGQHKGP 453
Query: 497 ITAISFD--GDNLVSGSQDRTVRQWDLNSGKCTQ--------TIDISFATGP-------- 538
I A+ ++ G+ ++S D+T WD ++G+CTQ +D+ + T
Sbjct: 454 IFALKWNKCGNYILSAGVDKTTIIWDASTGQCTQQFAFHSAPALDVDWQTNQAFASCSTD 513
Query: 539 -----MRSQRNIPLRNSVLLTKEPPAI-----GALQCFDAALATGTKDGIVRLWDLRSGK 588
R N P++ T E AI G L LA+ + D +++W + +
Sbjct: 514 QRIHVCRLGVNEPIKTFKGHTNEVNAIKWCPQGQL------LASCSDDMTLKIWSMNRDR 567
Query: 589 VVRMLEGHTDAITSLQFD-----------SVNLVTGAMDRSIRIWDLRTG-ILSDVFAYE 636
L+ H+ I ++++ ++ L + + D ++R+WD+ G + + +
Sbjct: 568 CCHDLQAHSKEIYTIKWSPTGPGTNNPNTNLILASASFDSTVRLWDVERGSCIHTLTKHT 627
Query: 637 QPITSLHFDLD 647
+P+ S+ F D
Sbjct: 628 EPVYSVAFSPD 638
>7293188 [D] KOG0267 Microtubule severing protein katanin p80 subunit B
(contains WD40 repeats)
Length = 296
Score = 70.9 bits (172), Expect = 6e-12
Identities = 63/247 (25%), Positives = 104/247 (41%), Gaps = 46/247 (18%)
Query: 387 SKITSLPKAHDEDITCLDFDMPFGTMCSAGSLDHSVKVWDLSKKKQIATLHGHLASISCM 446
SKI + KAHD +T LD G + G D +V +W + + + +L GH SI C+
Sbjct: 9 SKIYDI-KAHDSRVTSLDLGET-GRVLVTGGEDRNVNLWAIGQNECFMSLTGHNRSIDCV 66
Query: 447 QIDQYSTLITGGRD-AVLKLWDIDKAMADEASNSSEDNDACLY-TFDSHVDEITAISFD- 503
+ + D +++ WD+ N +Y T + H+ + + F+
Sbjct: 67 RFAYKDNFVYSADDIGIIRRWDL--------------NSQKIYSTLNGHMKSVRTLDFNP 112
Query: 504 -GDNLVSGSQDRTVRQWDL-NSGKCTQTIDISFATGPMRSQRNIPLRNSVLLTKEPPAIG 561
G+ +VSGS D TVR WD+ N C I G M ++ L
Sbjct: 113 SGEYVVSGSNDTTVRLWDVQNENNC-----IKVCRGHMSHVNSVKFSPDGLW-------- 159
Query: 562 ALQCFDAALATGTKDGIVRLWDLRSGKVVR--MLEGHTDAITSLQFDSVN--LVTGAMDR 617
+A+ +G + +WD+R K + + + AIT +QF L G +D
Sbjct: 160 --------IASAGLEGSILIWDIRKSKQIMEFIADPPVTAITCVQFHPFEFLLAAGRVDG 211
Query: 618 SIRIWDL 624
++ I+DL
Sbjct: 212 TVSIYDL 218
Score = 64.7 bits (156), Expect = 5e-10
Identities = 52/217 (23%), Positives = 95/217 (42%), Gaps = 40/217 (18%)
Query: 432 QIATLHGHLASISCMQIDQYS-TLITGGRDAVLKLWDIDKAMADEASNSSEDNDACLYTF 490
+I + H + ++ + + + L+TGG D + LW I + + C +
Sbjct: 10 KIYDIKAHDSRVTSLDLGETGRVLVTGGEDRNVNLWAIGQ-------------NECFMSL 56
Query: 491 DSHVDEITAISFD-GDNLVSGSQD-RTVRQWDLNSGKCTQTIDISFATGPMRSQRNIPLR 548
H I + F DN V + D +R+WDLNS K T++ G M+S R +
Sbjct: 57 TGHNRSIDCVRFAYKDNFVYSADDIGIIRRWDLNSQKIYSTLN-----GHMKSVRTLDFN 111
Query: 549 NSVLLTKEPPAIGALQCFDAALATGTKDGIVRLWDLRS-GKVVRMLEGHTDAITSLQF-- 605
S + +G+ D VRLWD+++ +++ GH + S++F
Sbjct: 112 PS----------------GEYVVSGSNDTTVRLWDVQNENNCIKVCRGHMSHVNSVKFSP 155
Query: 606 DSVNLVTGAMDRSIRIWDLRTGILSDVFAYEQPITSL 642
D + + + ++ SI IWD+R F + P+T++
Sbjct: 156 DGLWIASAGLEGSILIWDIRKSKQIMEFIADPPVTAI 192
Score = 57.0 bits (136), Expect = 1e-07
Identities = 42/203 (20%), Positives = 83/203 (40%), Gaps = 45/203 (22%)
Query: 396 HDEDITCLDFDMPFGTMCSAGSLDHSVKVWDLSKKKQIATLHGHLASISCMQIDQYST-L 454
H+ I C+ F + SA + ++ WDL+ +K +TL+GH+ S+ + + +
Sbjct: 59 HNRSIDCVRFAYKDNFVYSADDIG-IIRRWDLNSQKIYSTLNGHMKSVRTLDFNPSGEYV 117
Query: 455 ITGGRDAVLKLWDIDKAMADEASNSSEDNDACLYTFDSHVDEITAISFDGDNL--VSGSQ 512
++G D ++LWD+ ++ + C+ H+ + ++ F D L S
Sbjct: 118 VSGSNDTTVRLWDV------------QNENNCIKVCRGHMSHVNSVKFSPDGLWIASAGL 165
Query: 513 DRTVRQWDLNSGKCTQTIDISFATGPMRSQRNIPLRNSVLLTKEPPAIGALQC-----FD 567
+ ++ WD+ K ++ P + A+ C F+
Sbjct: 166 EGSILIWDIRKSK------------------------QIMEFIADPPVTAITCVQFHPFE 201
Query: 568 AALATGTKDGIVRLWDLRSGKVV 590
LA G DG V ++DL ++V
Sbjct: 202 FLLAAGRVDGTVSIYDLEHQQLV 224
>Hs4758558 [A] KOG0272 U4/U6 small nuclear ribonucleoprotein Prp4 (contains
WD40 repeats)
Length = 522
Score = 70.5 bits (171), Expect = 8e-12
Identities = 55/220 (25%), Positives = 87/220 (39%), Gaps = 38/220 (17%)
Query: 408 PFGTMCSAGSLDHSVKVWDLSKKKQIATLHGHLASISCMQIDQYSTLI-TGGRDAVLKLW 466
P G D S ++WDL +++I GH + + Q +L TGG DA ++W
Sbjct: 333 PSGRFLGTTCYDRSWRLWDLEAQEEILHQEGHSMGVYDIAFHQDGSLAGTGGLDAFGRVW 392
Query: 467 DIDKAMADEASNSSEDNDACLYTFDSHVDEITAISF--DGDNLVSGSQDRTVRQWDLNSG 524
D+ C+ + H+ EI I+F +G ++ +GS D T + WDL
Sbjct: 393 DLRTGR-------------CIMFLEGHLKEIYGINFSPNGYHIATGSGDNTCKVWDLRQR 439
Query: 525 KCTQTIDISFATGPMRSQRNIPLRNSVLLTKEPPAIGALQCFDAALATGTKDGIVRLWDL 584
+C TI +N V K P G L TG D ++W
Sbjct: 440 RCVYTIPAH--------------QNLVTGVKFEPIHGNF------LLTGAYDNTAKIWTH 479
Query: 585 RSGKVVRMLEGHTDAITSLQF--DSVNLVTGAMDRSIRIW 622
++ L GH + L D + T + DR+ ++W
Sbjct: 480 PGWSPLKTLAGHEGKVMGLDISSDGQLIATCSYDRTFKLW 519
Score = 67.0 bits (162), Expect = 9e-11
Identities = 56/231 (24%), Positives = 95/231 (40%), Gaps = 39/231 (16%)
Query: 396 HDEDITCLDFDMPFGTMCSAGSLDHSVKVWDLSKKKQIATLHGHLASISCMQIDQYSTLI 455
H + LD P ++ + D SVK+W L + +A + GH ++ + +
Sbjct: 282 HPKSTVSLD---PKDVNLASCAADGSVKLWSLDSDEPVADIEGHTVRVARVMWHPSGRFL 338
Query: 456 -TGGRDAVLKLWDIDKAMADEASNSSEDNDACLYTFDSHVDEITAISFDGDNLVSGSQDR 514
T D +LWD++ A E E + +Y H D G +G D
Sbjct: 339 GTTCYDRSWRLWDLE---AQEEILHQEGHSMGVYDIAFHQD--------GSLAGTGGLDA 387
Query: 515 TVRQWDLNSGKCTQTIDISFATGPMRSQRNIPLRNSVLLTKEPPAIGALQCFDAALATGT 574
R WDL +G+C I F G ++ I + +ATG+
Sbjct: 388 FGRVWDLRTGRC-----IMFLEGHLKEIYGINFSPN----------------GYHIATGS 426
Query: 575 KDGIVRLWDLRSGKVVRMLEGHTDAITSLQFDSVN---LVTGAMDRSIRIW 622
D ++WDLR + V + H + +T ++F+ ++ L+TGA D + +IW
Sbjct: 427 GDNTCKVWDLRQRRCVYTIPAHQNLVTGVKFEPIHGNFLLTGAYDNTAKIW 477
Score = 63.2 bits (152), Expect = 1e-09
Identities = 73/348 (20%), Positives = 132/348 (36%), Gaps = 60/348 (17%)
Query: 322 ENKEEEHSPLLSKSIYQQLQDHEKKSDISERK----KHSTSKKIKDVGVSHRNRRRKTYP 377
+ K+++ SK YQQ HE + + + +S + +K + + ++
Sbjct: 147 KTKKDDEKSKKSKEEYQQTWYHEGPNSLKVARLWIANYSLPRAMKRLEEARLHKEIPETT 206
Query: 378 TLQQFYDSGSKITSLPK-----AHDEDITCLDFDMPFGTMCSAGSLDHSVKVWDLSKKKQ 432
Q + + SL D I+ F P M + K+W +
Sbjct: 207 RTSQMQELHKSLRSLNNFCSQIGDDRPISYCHFS-PNSKMLATACWSGLCKLWSVPDCNL 265
Query: 433 IATLHGHLASISCMQIDQYST---------LITGGRDAVLKLWDIDKAMADEASNSSEDN 483
+ TL GH ++ + ST L + D +KLW +D +
Sbjct: 266 LHTLRGHNTNVGAIVFHPKSTVSLDPKDVNLASCAADGSVKLWSLD-------------S 312
Query: 484 DACLYTFDSHVDEITAISF--DGDNLVSGSQDRTVRQWDLNSGKCTQTIDISFATGPMRS 541
D + + H + + + G L + DR+ R WDL + + +I G
Sbjct: 313 DEPVADIEGHTVRVARVMWHPSGRFLGTTCYDRSWRLWDLEAQE-----EILHQEGHSMG 367
Query: 542 QRNIPLRNSVLLTKEPPAIGALQCFDAALA-TGTKDGIVRLWDLRSGKVVRMLEGHTDAI 600
+I D +LA TG D R+WDLR+G+ + LEGH I
Sbjct: 368 VYDIAFHQ-----------------DGSLAGTGGLDAFGRVWDLRTGRCIMFLEGHLKEI 410
Query: 601 TSLQF--DSVNLVTGAMDRSIRIWDLR-TGILSDVFAYEQPITSLHFD 645
+ F + ++ TG+ D + ++WDLR + + A++ +T + F+
Sbjct: 411 YGINFSPNGYHIATGSGDNTCKVWDLRQRRCVYTIPAHQNLVTGVKFE 458
>7290895 [R] KOG0286 G-protein beta subunit
Length = 358
Score = 70.5 bits (171), Expect = 8e-12
Identities = 64/254 (25%), Positives = 102/254 (39%), Gaps = 57/254 (22%)
Query: 408 PFGTMCSAGSLDHSVKVWDLSKKKQIA----TLHGHLASISC-MQIDQYSTLITGGRDAV 462
P G + G LD+ V V+ ++ +++A T+ H + +SC + + ++TG D+
Sbjct: 122 PSGNFVACGGLDNKVTVYPITSDEEMAAKKRTVGTHTSYMSCCIYPNSDQQILTGSGDST 181
Query: 463 LKLWDIDKAMADEASNSSEDNDACLYTFDSHVDEITAISF----DGDNLVSGSQDRTVRQ 518
LWD++ L +F H ++ AI G+ VSGS DR
Sbjct: 182 CALWDVESGQL-------------LQSFHGHSGDVMAIDLAPNETGNTFVSGSCDRMAFI 228
Query: 519 WDLNSGKCTQTID---------------ISFATG---------PMRSQRNIPLRNSVLLT 554
WD+ SG Q+ + + ATG MR+ R + +
Sbjct: 229 WDMRSGHVVQSFEGHQSDVNSVKFHPCGDAIATGSDDSSCRLYDMRADREV-----AVFA 283
Query: 555 KEPPAIGA----LQCFDAALATGTKDGIVRLWDLRSGKVVRMLEGHTDAITSLQF--DSV 608
KE G L G D V LWD + V +L GH + ++ +Q D
Sbjct: 284 KESIIFGVNSVDFSVSGRLLFAGYNDYTVNLWDTLKSERVCLLYGHENKVSCVQVSPDGT 343
Query: 609 NLVTGAMDRSIRIW 622
L TG+ D +IR+W
Sbjct: 344 ALSTGSWDYTIRVW 357
>SPBC15D4.14 [K] KOG0263 Transcription initiation factor TFIID subunit TAF5
(also component of histone acetyltransferase SAGA)
Length = 642
Score = 70.1 bits (170), Expect = 1e-11
Identities = 53/213 (24%), Positives = 84/213 (38%), Gaps = 39/213 (18%)
Query: 417 SLDHSVKVWDLSKKKQIATLHGHLASISCMQIDQYSTLI-TGGRDAVLKLWDIDKAMADE 475
S D ++W K I GH A I +Q + T D +LWD++ A
Sbjct: 422 SEDGFTRLWSKDTKSTIVKYAGHNAPIWDVQFSPFGYYFATASHDQTARLWDVEHA---- 477
Query: 476 ASNSSEDNDACLYTFDSHVDEITAISF--DGDNLVSGSQDRTVRQWDLNSGKCTQTIDIS 533
A L F H +++ +SF + L +GS D T R WD+ +G + +
Sbjct: 478 ---------APLRVFVGHQNDVDCVSFHPNAAYLATGSSDHTTRMWDVRTGGTVRVFNAH 528
Query: 534 FATGPMRSQRNIPLRNSVLLTKEPPAIGALQCFDAALATGTKDGIVRLWDLRSGKVVRML 593
+ P + + +LA+ + GI+++WDLRS
Sbjct: 529 HS---------------------PVSALCMSADGLSLASADESGIIKVWDLRSSNQHVSF 567
Query: 594 EGHTDAITSLQF--DSVNLVTGAMDRSIRIWDL 624
H+ + SL F D+ LV+G D + WDL
Sbjct: 568 VKHSSIVYSLSFSYDNKILVSGGADTDVNFWDL 600
Score = 60.1 bits (144), Expect = 1e-08
Identities = 40/154 (25%), Positives = 74/154 (47%), Gaps = 27/154 (17%)
Query: 566 FDAALATGTKDGIVRLWDLRSGKVVRMLEGHTDAITSLQF--DSVNLVTGAMDRSIRIWD 623
F AT + D RLWD+ +R+ GH + + + F ++ L TG+ D + R+WD
Sbjct: 456 FGYYFATASHDQTARLWDVEHAAPLRVFVGHQNDVDCVSFHPNAAYLATGSSDHTTRMWD 515
Query: 624 LRTGILSDVF-AYEQPITSLHFDLDKIVISNNEPT--VKIYNRKDGNHWFCGEDDPEQGN 680
+RTG VF A+ P+++L D + +++ + + +K+++ + N +
Sbjct: 516 VRTGGTVRVFNAHHSPVSALCMSADGLSLASADESGIIKVWDLRSSNQ-----------H 564
Query: 681 VDFVR-----------YKHGYLVEGRSNGDINTW 703
V FV+ Y + LV G ++ D+N W
Sbjct: 565 VSFVKHSSIVYSLSFSYDNKILVSGGADTDVNFW 598
Score = 58.9 bits (141), Expect = 3e-08
Identities = 63/253 (24%), Positives = 101/253 (39%), Gaps = 42/253 (16%)
Query: 432 QIATLHGHLASISCMQID-QYSTLITGGRDAVLKLWDIDKAMADEASNSSEDNDACLYTF 490
Q ++L GH + + I Q +++ D +LW S+D + + +
Sbjct: 395 QKSSLIGHTRPVFGVSISPQKEFILSCSEDGFTRLW-------------SKDTKSTIVKY 441
Query: 491 DSHVDEITAISFD--GDNLVSGSQDRTVRQWDLNSGKCTQTIDISFATGPMRSQRNIPLR 548
H I + F G + S D+T R WD+ + PLR
Sbjct: 442 AGHNAPIWDVQFSPFGYYFATASHDQTARLWDV--------------------EHAAPLR 481
Query: 549 NSVLLTKEPPAIGALQCFDAALATGTKDGIVRLWDLRSGKVVRMLEGHTDAITSLQFDSV 608
V + + + A LATG+ D R+WD+R+G VR+ H +++L +
Sbjct: 482 VFVGHQNDVDCV-SFHPNAAYLATGSSDHTTRMWDVRTGGTVRVFNAHHSPVSALCMSAD 540
Query: 609 NLVTGAMDRS--IRIWDLRTGILSDVFAYEQPIT-SLHFDLD-KIVISNNEPT-VKIYNR 663
L + D S I++WDLR+ F I SL F D KI++S T V ++
Sbjct: 541 GLSLASADESGIIKVWDLRSSNQHVSFVKHSSIVYSLSFSYDNKILVSGGADTDVNFWDL 600
Query: 664 KDGNHWFCGEDDP 676
N+ GE P
Sbjct: 601 TYRNNLSDGEQSP 613
>Hs13376751 [R] KOG0266 WD40 repeat-containing protein
Length = 392
Score = 70.1 bits (170), Expect = 1e-11
Identities = 45/140 (32%), Positives = 66/140 (47%), Gaps = 17/140 (12%)
Query: 390 TSLPKAHDEDITCLDFDMPFGTMCSAGSLDHSVKVWDLSKKKQIATLHGHLASISCMQID 449
T+ + H + ITCLD G S+ S D ++K+W S + L GH+ ++C +
Sbjct: 85 TTFSRIHTKSITCLDISSRGGLGVSS-STDGTMKIWQASNGELRRVLEGHVFDVNCCRFF 143
Query: 450 QYSTLI-TGGRDAVLKLWDIDKAMADEASNSSEDNDACLYTFDSHVDEI--TAISFDGDN 506
++ +GG DA LK+W + A +C+ TF H I TAI G N
Sbjct: 144 PSGLVVLSGGMDAQLKIWSAEDA-------------SCVVTFKGHKGGILDTAIVDRGRN 190
Query: 507 LVSGSQDRTVRQWDLNSGKC 526
+VS S+D T R WD C
Sbjct: 191 VVSASRDGTARLWDCGRSAC 210
>At3g18130 [T] KOG0279 G protein beta subunit-like protein
Length = 326
Score = 70.1 bits (170), Expect = 1e-11
Identities = 70/277 (25%), Positives = 115/277 (41%), Gaps = 52/277 (18%)
Query: 386 GSKITSLPKAHDEDITCLDFDMPFGTMCSAGSLDHSVKVWDLSKK-------KQIATLHG 438
G + + +AH + +T + + + S D S+ +W L+K ++ T H
Sbjct: 4 GLVLKGIMRAHTDIVTAIATPIDNSDIIVTASRDKSIILWKLTKDDKSYGVAQRRLTGHS 63
Query: 439 HLASISCMQIDQYSTLITGGRDAVLKLWDIDKAMADEASNSSEDNDACLYTFDSHVDEIT 498
H + D L +G D L+LWD+ F H ++
Sbjct: 64 HFVEDVVLSSDGQFAL-SGSWDGELRLWDLATGETTRR-------------FVGHTKDVL 109
Query: 499 AISFDGDN--LVSGSQDRTVRQWDLNSGKCTQTID-----------ISFA---------- 535
+++F DN +VS S+DRT++ W+ G+C TI + F+
Sbjct: 110 SVAFSTDNRQIVSASRDRTIKLWN-TLGECKYTISEGDGHKEWVSCVRFSPNTLVPTIVS 168
Query: 536 -----TGPMRSQRNIPLRNSVLLTKEPPAIGALQCFDAALATGTKDGIVRLWDLRSGKVV 590
T + + +N LRNS++ A+ + A+G KDG++ LWDL GK +
Sbjct: 169 ASWDKTVKVWNLQNCKLRNSLVGHSGYLNTVAVSPDGSLCASGGKDGVILLWDLAEGKKL 228
Query: 591 RMLEGHTDAITSLQFDSVNL-VTGAMDRSIRIWDLRT 626
LE + I SL F + A + SIRIWDL +
Sbjct: 229 YSLEAGS-IIHSLCFSPNRYWLCAATENSIRIWDLES 264
Score = 58.2 bits (139), Expect = 4e-08
Identities = 46/183 (25%), Positives = 89/183 (48%), Gaps = 28/183 (15%)
Query: 492 SHVDEITAISFDGDN---LVSGSQDRTVRQWDLNSGKCTQTIDISFATGPMRSQRNIPLR 548
+H D +TAI+ DN +V+ S+D+++ W L D S+ R +
Sbjct: 13 AHTDIVTAIATPIDNSDIIVTASRDKSIILWKLTKD------DKSYGVAQRRLTGHSHFV 66
Query: 549 NSVLLTKEPPAIGALQCFDAALATGTKDGIVRLWDLRSGKVVRMLEGHTDAITSLQF--D 606
V+L+ + +G+ DG +RLWDL +G+ R GHT + S+ F D
Sbjct: 67 EDVVLSSD----------GQFALSGSWDGELRLWDLATGETTRRFVGHTKDVLSVAFSTD 116
Query: 607 SVNLVTGAMDRSIRIWDLR---TGILSDVFAYEQPITSLHFD----LDKIVISNNEPTVK 659
+ +V+ + DR+I++W+ +S+ +++ ++ + F + IV ++ + TVK
Sbjct: 117 NRQIVSASRDRTIKLWNTLGECKYTISEGDGHKEWVSCVRFSPNTLVPTIVSASWDKTVK 176
Query: 660 IYN 662
++N
Sbjct: 177 VWN 179
>Hs18874090 [S] KOG0308 Conserved WD40 repeat-containing protein
Length = 677
Score = 69.7 bits (169), Expect = 1e-11
Identities = 53/239 (22%), Positives = 107/239 (44%), Gaps = 34/239 (14%)
Query: 394 KAHDEDITCLDFDMPFGTMCSAGSLDHSVKVWDLSKKKQ---IATLHGHLASISCMQID- 449
K + + L D + +AG D +++W +++ KQ IA++ H ++ + +
Sbjct: 27 KYNRNGVNALQLDPALNRLFTAGR-DSIIRIWSVNQHKQDPYIASMEHHTDWVNDIVLCC 85
Query: 450 QYSTLITGGRDAVLKLWDIDKAMADEASNSSEDNDACLYTFDSHVDEITAISF--DGDNL 507
TLI+ D +K+W+ K C+ T +H D + A+++ D + +
Sbjct: 86 NGKTLISASSDTTVKVWNAHKGF-------------CMSTLRTHKDYVKALAYAKDKELV 132
Query: 508 VSGSQDRTVRQWDLNSGKCTQTIDISFATGPMRSQRNIPLRNSVLLTKEPPAIGALQCFD 567
S DR + WD+N+ + + N +S+ K+ A+
Sbjct: 133 ASAGLDRQIFLWDVNT------------LTALTASNNTVTTSSLSGNKDSIYSLAMNQLG 180
Query: 568 AALATGTKDGIVRLWDLRSGKVVRMLEGHTDAITSLQF--DSVNLVTGAMDRSIRIWDL 624
+ +G+ + ++R+WD R+ + L+GHTD + +L D ++G+ D +IR+W L
Sbjct: 181 TIIVSGSTEKVLRVWDPRTCAKLMKLKGHTDNVKALLLNRDGTQCLSGSSDGTIRLWSL 239
Score = 67.8 bits (164), Expect = 5e-11
Identities = 70/277 (25%), Positives = 123/277 (44%), Gaps = 40/277 (14%)
Query: 411 TMCSAGSLDHSVKVWDLSKKKQIATLHGHLASISCMQIDQYSTLI-TGGRDAVLKLWDID 469
T+ SA S D +VKVW+ K ++TL H + + + L+ + G D + LWD++
Sbjct: 89 TLISASS-DTTVKVWNAHKGFCMSTLRTHKDYVKALAYAKDKELVASAGLDRQIFLWDVN 147
Query: 470 KAMADEASNSSEDNDACLYTFDSHVDEITAISFD--GDNLVSGSQDRTVRQWDLNSGKCT 527
A ASN N + + D I +++ + G +VSGS ++ +R WD + C
Sbjct: 148 TLTALTASN----NTVTTSSLSGNKDSIYSLAMNQLGTIIVSGSTEKVLRVWDPRT--CA 201
Query: 528 QTIDISFATGPMRSQRNIPLRNSVLLTKEPPAIGALQCFDAALATGTKDGIVRLWDLRSG 587
+ + + T +++ +LL ++ QC +G+ DG +RLW L
Sbjct: 202 KLMKLKGHTDNVKA---------LLLNRD-----GTQCL-----SGSSDGTIRLWSLGQQ 242
Query: 588 KVVRMLEGHTDAITSLQFDS--VNLVTGAMDRSIRIWDLRTGILSDVFAYEQPITSLHFD 645
+ + H + + +LQ + ++ +G DR I DLR + V E+ L +
Sbjct: 243 RCIATYRVHDEGVWALQVNDAFTHVYSGGRDRKIYCTDLRNPDIR-VLICEEKAPVLKME 301
Query: 646 LDK-------IVISNNEPTVKIYNRKDGNHWFCGEDD 675
LD+ I ++ + TV + K G H F D
Sbjct: 302 LDRSADPPPAIWVATTKSTVNKWTLK-GIHNFRASGD 337
>At3g16650 [A] KOG0285 Pleiotropic regulator 1
Length = 477
Score = 69.7 bits (169), Expect = 1e-11
Identities = 68/244 (27%), Positives = 103/244 (41%), Gaps = 48/244 (19%)
Query: 412 MCSAGSLDHSVKVWDLSKKKQIATLHGHLASISCMQI-DQYSTLITGGRDAVLKLWDIDK 470
M SAG D VK WDL + K I + HGHL + C+ + ++TGGRD+V ++WDI
Sbjct: 225 MFSAGD-DKQVKCWDLEQNKVIRSYHGHLHGVYCLALHPTLDVVLTGGRDSVCRVWDIRT 283
Query: 471 AMADEASNSSEDNDACLYTFDSHVDEITAISFDGDNLVSGSQDRTVRQWDLNSGKCTQTI 530
M + DS V + A D +++GS D T++ WDL GK TI
Sbjct: 284 KM-----------QIFVLPHDSDVFSVLARPTD-PQVITGSHDSTIKFWDLRYGKSMATI 331
Query: 531 DISFATGPMRSQRNIPLRNSV---------------------LLTKEPPAIGALQC-FDA 568
T +R+ P N +L+ + I A+ D
Sbjct: 332 TNHKKT--VRAMALHPKENDFVSASADNIKKFSLPKGEFCHNMLSLQRDIINAVAVNEDG 389
Query: 569 ALATGTKDGIVRLWDLRSGKVVRMLE-----GHTDA---ITSLQFDSV--NLVTGAMDRS 618
+ TG G + WD +SG + E G ++ I + +D LVT D++
Sbjct: 390 VMVTGGDKGGLWFWDWKSGHNFQRAETIVQPGSLESEAGIYAACYDQTGSRLVTCEGDKT 449
Query: 619 IRIW 622
I++W
Sbjct: 450 IKMW 453
>Hs8922679 [R] KOG0275 Conserved WD40 repeat-containing protein
Length = 513
Score = 68.9 bits (167), Expect = 2e-11
Identities = 54/182 (29%), Positives = 93/182 (50%), Gaps = 26/182 (14%)
Query: 492 SHVDEITAISFDGDNLVSGSQDRTVRQWDLNSGKCTQTIDISFATGPMRSQRNIPLRNSV 551
SHV E S DG LV+GS D + W+ +GK + D+ + ++Q N + +
Sbjct: 215 SHV-ECARFSPDGQYLVTGSVDGFIEVWNFTTGKIRK--DLKY-----QAQDNFMMMDDA 266
Query: 552 LLTKEPPAIGALQCFDA---ALATGTKDGIVRLWDLRSGKVVRMLE-GHTDAITSLQF-- 605
+L CF LATG +DG +++W ++SG+ +R E H+ +T L F
Sbjct: 267 VLC---------MCFSRDTEMLATGAQDGKIKVWKIQSGQCLRRFERAHSKGVTCLSFSK 317
Query: 606 DSVNLVTGAMDRSIRIWDLRTG-ILSDVFAYEQPITSLHFDLD--KIVISNNEPTVKIYN 662
DS +++ + D++IRI L++G L + + + F D I+ ++++ TVKI+N
Sbjct: 318 DSSQILSASFDQTIRIHGLKSGKTLKEFRGHSSFVNEATFTQDGHYIISASSDGTVKIWN 377
Query: 663 RK 664
K
Sbjct: 378 MK 379
>ECU03g0430 [S] KOG0271 Notchless-like WD40 repeat-containing protein
Length = 414
Score = 68.9 bits (167), Expect = 2e-11
Identities = 59/243 (24%), Positives = 99/243 (40%), Gaps = 40/243 (16%)
Query: 467 DIDKAMADEASNSSEDNDACLYTFDSHVDEITAISFDGDNLVSGSQDRTVRQWDLNSGKC 526
++ K E +++ C +F H + + + G +V+G D TVR WD
Sbjct: 87 EVVKIRMSEEEPATQAAFHCSSSFSGHEGPVLCVRYGGV-IVTGGGDSTVRFWD------ 139
Query: 527 TQTIDISFATGPM-RSQRNIPLRNSVLLTKEPPAIGALQCFDAA-----LATGTKDGIVR 580
PM R+Q + R+ + Q D + +A+G DG V
Sbjct: 140 -----------PMTRTQSKVVKRHDHWV----------QSLDISPDGKWIASGALDGSVN 178
Query: 581 LWDLRSGKVVRMLEGHTDAITSLQFDSVNLVTGAMDRSIRIWDLRTGILSDVFAYEQPIT 640
L+ G+ +R GH I +L F NLVTG+ D S+ +W L +L +A+ P+T
Sbjct: 179 LYS-SDGEYIRSFPGHRKGIVALAFHRGNLVTGSRDNSVVVWSLNGEVLLS-YAHTMPVT 236
Query: 641 SLHFDLDKIVISNNEPTVKIYNRKDGNHWFCGEDDPEQGNVDFVRYKHGYLVEGRSNGDI 700
+ D + + + +K+Y N F E ++ + Y+V G GD+
Sbjct: 237 CICSGEDYMASGSKDGRIKVYK----NLRFAEELRGHSSGINAIDCNGNYMVSGCDGGDV 292
Query: 701 NTW 703
W
Sbjct: 293 IVW 295
Score = 58.2 bits (139), Expect = 4e-08
Identities = 56/281 (19%), Positives = 110/281 (38%), Gaps = 35/281 (12%)
Query: 396 HDEDITCLDFDMPFGTMCSAGSLDHSVKVWDLSKKKQIATLHGHLASISCMQIDQYSTLI 455
H+ + C+ + G + G D +V+ WD + Q + H + + I I
Sbjct: 113 HEGPVLCVRY----GGVIVTGGGDSTVRFWDPMTRTQSKVVKRHDHWVQSLDISPDGKWI 168
Query: 456 TGGRDAVLKLWDIDKAMADEASNSSEDNDACLYTFDSHVDEITAISFDGDNLVSGSQDRT 515
G D + N + + +F H I A++F NLV+GS+D +
Sbjct: 169 ASGA-------------LDGSVNLYSSDGEYIRSFPGHRKGIVALAFHRGNLVTGSRDNS 215
Query: 516 VRQWDLNSG-----------KCTQTIDISFATGPMRSQRNI--PLRNSVLLTKEPPAIGA 562
V W LN C + + A+G + + LR + L I A
Sbjct: 216 VVVWSLNGEVLLSYAHTMPVTCICSGEDYMASGSKDGRIKVYKNLRFAEELRGHSSGINA 275
Query: 563 LQCFDAALATGTKDGIVRLWDLRSGKVVRMLEGHTDAITSLQF--DSVNLVTGAMDRSIR 620
+ C + +G G V +W G + H+ + S+ + + + +G+ D+S++
Sbjct: 276 IDCNGNYMVSGCDGGDVIVW---KGFALHKRMKHSAEVISVSISPNKLYVASGSFDKSVK 332
Query: 621 IWDLRTGILSDVFAYEQPITSLHFDLDKIVISNNEPTVKIY 661
+W + +G F + + + D +V + + T+K++
Sbjct: 333 LWSMDSGQQLSSFRHMDLVYKIKMMNDLVVSCSKDKTIKMF 373
>CE18408 [R] KOG4155 FOG: WD40 repeat
Length = 1101
Score = 68.9 bits (167), Expect = 2e-11
Identities = 79/321 (24%), Positives = 127/321 (38%), Gaps = 48/321 (14%)
Query: 394 KAHDEDITCLDFDMPFGTMCSAGSLDHSVKVWDLSKKKQIATLHGHLASISCMQI---DQ 450
K H +TCL S S D +V VW S+ +L H A ++C + DQ
Sbjct: 417 KGHTAAVTCLCSSNDSSLFVST-SFDKTVNVWVFSQSTPTMSLTHHTAKVTCAILTSDDQ 475
Query: 451 YSTLITGGRDAVLKLWDIDKAMADEASNSSEDNDACLYTFDSHVDEITAISFDGDN--LV 508
Y LIT D+ K+ + + + +F+ H + ++ +N L+
Sbjct: 476 Y--LITASADSSAKMIKL-------------ETGEVMRSFNDHTGSVVSLQLTSNNQFLI 520
Query: 509 SGSQDRTVRQWDLNSGKCTQTIDISFATGPMRSQRNIPLRNSVLLTKEPPAIGALQCFDA 568
+GS D V+ WD+ +GKC IS G M P + A+ DA
Sbjct: 521 TGSGDFVVQMWDVTNGKC-----ISRMGGLM----------------APVSTLAITSNDA 559
Query: 569 ALATGTKDGIVRLWDLRSGKVVRMLEGHTDAITSLQFDSVNLVTGAMDRS-IRIWDLRTG 627
+ +D ++++ G+ + L GH + SL + A +S + +D+ G
Sbjct: 560 FVVVACEDETLKVFSTVGGQELHELMGHEGKVNSLVCAQDDCQLFAATKSKVFCYDIHNG 619
Query: 628 ILSDVFAYEQ--PITSLHFDLDK-IVISNNEPTVKIYNRKDGNHWFCGEDDPEQGNVDFV 684
+ DV Q PI SL D +IS P V I+N NH ++G + V
Sbjct: 620 QMIDVLDTAQPFPICSLKISSDNYFLISPCGPKVTIWNVTKRNHDAHDVHADKEGFLTAV 679
Query: 685 RYKHG--YLVEGRSNGDINTW 703
+ Y G +NG + W
Sbjct: 680 ALSNDDKYAACGTNNGIVALW 700
Score = 57.0 bits (136), Expect = 1e-07
Identities = 46/198 (23%), Positives = 83/198 (41%), Gaps = 22/198 (11%)
Query: 382 FYDSGSKITSLPKAHDEDITCLDFDMPFGTMCSAGSLDHSVKVWDLSK--KKQIATLHGH 439
F + G +T +H ++ITC G + GS D S+K+W + K Q+ H +
Sbjct: 829 FPEEGPPVTRAKLSHSDEITCFATSPKGGNFIATGSRDMSLKIWQIDKGFLTQVLVGHEN 888
Query: 440 LASISCMQIDQYSTLITGGRDAVLKLWDIDKAMADEASNSSEDNDACLYTFDSHVDEITA 499
+ + C+ D+ +++G RD + +W++ N++ IT+
Sbjct: 889 VVTCCCISFDE-RLVVSGARDEKIIVWNVQSGDMVCTVNTTA--------------AITS 933
Query: 500 ISFDGDNLV--SGSQDRTVRQWDLNSGKCTQTIDISFATGPMRSQRNIPLRNSVLLTKEP 557
+S GD+ V S ++D V W G+ T + A P++ N + +LL E
Sbjct: 934 LSMTGDSTVVFSTTEDGWVETWSTTKGRLLSTFN---AHRPIKKLINSYESHRMLLLLEN 990
Query: 558 PAIGALQCFDAALATGTK 575
A + C A G +
Sbjct: 991 CAQLPILCLHNTPAVGVE 1008
Score = 56.6 bits (135), Expect = 1e-07
Identities = 50/207 (24%), Positives = 90/207 (43%), Gaps = 41/207 (19%)
Query: 489 TFDSHVDEITAISFDGDN--LVSGSQDRTVRQWDLNSGKCTQTIDISFATGPMRSQRNIP 546
TF H +T + D+ VS S D+TV W + T T+ ++ T +
Sbjct: 415 TFKGHTAAVTCLCSSNDSSLFVSTSFDKTVNVWVFSQS--TPTMSLTHHTAKV------- 465
Query: 547 LRNSVLLTKEPPAIGALQCFDAALATGTKDGIVRLWDLRSGKVVRMLEGHTDAITSLQFD 606
+LT + D L T + D ++ L +G+V+R HT ++ SLQ
Sbjct: 466 --TCAILTSD----------DQYLITASADSSAKMIKLETGEVMRSFNDHTGSVVSLQLT 513
Query: 607 SVN--LVTGAMDRSIRIWDLRTG-ILSDVFAYEQPITSLHFDLDK--IVISNNEPTVKIY 661
S N L+TG+ D +++WD+ G +S + P+++L + +V++ + T+K++
Sbjct: 514 SNNQFLITGSGDFVVQMWDVTNGKCISRMGGLMAPVSTLAITSNDAFVVVACEDETLKVF 573
Query: 662 NRKDG-------------NHWFCGEDD 675
+ G N C +DD
Sbjct: 574 STVGGQELHELMGHEGKVNSLVCAQDD 600
>SPBC1289.11 [A] KOG0265 U5 snRNP-specific protein-like factor and related
proteins
Length = 340
Score = 68.6 bits (166), Expect = 3e-11
Identities = 58/234 (24%), Positives = 103/234 (43%), Gaps = 37/234 (15%)
Query: 396 HDEDITCLDFDMPFGTMCSAGSLDHSVKVWDL-SKKKQIATLHGHLASISCMQIDQYSTL 454
H ++ FD P G+ ++G +D + +W++ K L+G +I+ +Q + S +
Sbjct: 49 HTAEVLVARFD-PSGSYFASGGMDRQILLWNVFGDVKNYGVLNGCKGAITDLQWSRDSRV 107
Query: 455 I-TGGRDAVLKLWDIDKAMADEASNSSEDNDACLYTFDSHVDEITAISFDGDNLVSGSQD 513
+ D L WD A++ + + + + D + + L S S D
Sbjct: 108 VYCSSSDTHLMSWD---AVSGQKIRKHKGHAGVVNALD-------VLKVGSELLTSVSDD 157
Query: 514 RTVRQWDLNSGKCTQTIDISFATGPMRSQRNIPLRNSVLLTKEPPAIGALQCFDAALATG 573
T++ WD S C +TI+ + LT A Q F G
Sbjct: 158 CTMKVWDSRSKDCIKTIEEKYP-----------------LTAVAIAQQGTQVF-----IG 195
Query: 574 TKDGIVRLWDLRSGKVVRMLEGHTDAITSLQF--DSVNLVTGAMDRSIRIWDLR 625
DG +++WDLR+ +L+GH D ITSL D +L++ +MD ++RI+D++
Sbjct: 196 GIDGAIKIWDLRNNHCSHVLKGHKDIITSLAISKDGSSLLSNSMDNTVRIFDVK 249
Score = 61.2 bits (147), Expect = 5e-09
Identities = 62/245 (25%), Positives = 106/245 (42%), Gaps = 34/245 (13%)
Query: 385 SGSKITSLPKAHDEDITCLDFDMPFGTMCSAGSLDHSVKVWDLSKKKQIATLHGHLASIS 444
SG KI K H + LD + ++ S D ++KVWD K I T+ +
Sbjct: 124 SGQKIRK-HKGHAGVVNALDVLKVGSELLTSVSDDCTMKVWDSRSKDCIKTIEEKYPLTA 182
Query: 445 CMQIDQYSTLITGGRDAVLKLWDIDKAMADEASNSSEDNDACLYTFDSHVDEIT--AISF 502
Q + + GG D +K+WD+ N+ C + H D IT AIS
Sbjct: 183 VAIAQQGTQVFIGGIDGAIKIWDL-------------RNNHCSHVLKGHKDIITSLAISK 229
Query: 503 DGDNLVSGSQDRTVRQWDLNSGKCTQTIDISFATGPMRSQRNIPLRNSVLLTKEPPAIGA 562
DG +L+S S D TVR +D+ FA+ +QR + + + +E +G
Sbjct: 230 DGSSLLSNSMDNTVRIFDVK----------PFAS----AQRQLQIFEGAIHGQEHNLLGV 275
Query: 563 LQCFDAA-LATGTKDGIVRLWDLRSGKVVRMLEGHTDAITSLQFDSVN--LVTGAMDRSI 619
++ + G+ D V +W +G + +L GH ++ + F +++ + DR+I
Sbjct: 276 AWSRNSRFVGAGSSDKNVYVWS-ATGDLRYVLPGHEGSVNHVDFHPHQDIILSCSSDRTI 334
Query: 620 RIWDL 624
+ +L
Sbjct: 335 FLGEL 339
>7290219 [R] KOG0646 WD40 repeat protein
Length = 506
Score = 68.6 bits (166), Expect = 3e-11
Identities = 60/258 (23%), Positives = 114/258 (43%), Gaps = 42/258 (16%)
Query: 408 PFGTMCSAGSLDHSVKVWDLSKKKQIATLHGHLASISCMQI-DQYSTLITGGRDAVLKLW 466
P G AG + ++ +W +S + + TL H +I+C++ D I+GG+D + +W
Sbjct: 92 PDGNFLVAG-IQENIYLWHMSSGRMLNTLSKHYQAITCLRFTDNGEHFISGGKDGAVLVW 150
Query: 467 DIDKAMADEASNSSEDNDACLYTFDSH----VDEITAISFDGDNLVSGSQDRTVRQWDLN 522
D+ + A + +D+ LY+F+ H D + I L + S DR + +DL
Sbjct: 151 DLTFSAAPLDTGGGKDSTEPLYSFNDHGLAVTDLYSGIGGIRSYLYTVSLDRCCKVYDLC 210
Query: 523 SGKCTQTIDISFATGPMRSQRNIPLRNSVLLTKEPPAIGALQCFDAALATGTKDGIVRLW 582
G ++ A +SV+++K + + G+ DG V ++
Sbjct: 211 GGVLLLSVVFPVAL------------HSVIVSK----------METRVYVGSSDGKVFVF 248
Query: 583 DLRS----------GKVVRMLEGHT--DAIT--SLQFDSVNLVTGAMDRSIRIWDLRTGI 628
++ + G+ ++ GHT AIT +L + LV+G D + +WD+ +
Sbjct: 249 NMENAPRMKEYHLEGEEIQAFVGHTYGKAITCLALNISATTLVSGGEDNQVCVWDVGSRQ 308
Query: 629 LSDVFAYEQPITSLHFDL 646
L + + +T+LH L
Sbjct: 309 LIKSLSQKGSVTNLHIRL 326
>YLR129w [A] KOG0306 WD40-repeat-containing subunit of the 18S rRNA
processing complex
Length = 943
Score = 68.2 bits (165), Expect = 4e-11
Identities = 59/229 (25%), Positives = 106/229 (45%), Gaps = 23/229 (10%)
Query: 421 SVKVWDLSKKKQIATLHGHLASISCMQIDQYSTLITGGRDAVLKLWDIDKAMADEASNSS 480
S+K+W++ K I T A ++C + +I G R+ L+L+D+ A +
Sbjct: 413 SLKIWNIKTHKCIRTFECGYA-LTCKFLPGGLLVILGTRNGELQLFDL--ASSSLLDTIE 469
Query: 481 EDNDACLYTFDSHVDEITAISFDGDNLVSGSQDRTVRQWD--LNSGKCTQTIDISFATGP 538
+ +DA +++ D ++ DG LV+GS D+TV+ WD + + T +
Sbjct: 470 DAHDAAIWSLD--------LTSDGKRLVTGSADKTVKFWDFKVENSLVPGTKNKFLPVLK 521
Query: 539 MRSQRNIPLRNSVLLTKEPPAIGALQCFDAALATGTKDGIVRLWDLRSGKVVRMLEGHTD 598
+ + L + +L + P D LA D V+++ L S K L GH
Sbjct: 522 LHHDTTLELTDDILCVRVSPD-------DRYLAISLLDNTVKVFFLDSMKFYLSLYGHKL 574
Query: 599 AITS--LQFDSVNLVTGAMDRSIRIWDLRTG-ILSDVFAYEQPITSLHF 644
+ S + FDS ++T + D++I+IW L G +FA++ I ++ F
Sbjct: 575 PVLSIDISFDSKMIITSSADKNIKIWGLDFGDCHKSLFAHQDSIMNVKF 623
Score = 65.9 bits (159), Expect = 2e-10
Identities = 38/120 (31%), Positives = 62/120 (51%), Gaps = 15/120 (12%)
Query: 412 MCSAGSLDHSVKVWDLSKKKQIATLHGHLASISCMQIDQYST-LITGGRDAVLKLWDIDK 470
+ + G D +KVWDL K + +GH A+I+ +Q D T LI+G +D+ + +WD+
Sbjct: 93 LLAVGYADGVIKVWDLMSKTVLLNFNGHKAAITLLQFDGTGTRLISGSKDSNIIVWDL-- 150
Query: 471 AMADEASNSSEDNDACLYTFDSHVDEITAISFDGDN-LVSGSQDRTVRQWDLNSGKCTQT 529
+ LY SH D IT G++ L+S S+D ++ WDL + +C +T
Sbjct: 151 -----------VGEVGLYKLRSHKDSITGFWCQGEDWLISTSKDGMIKLWDLKTHQCIET 199
Score = 55.1 bits (131), Expect = 4e-07
Identities = 36/123 (29%), Positives = 56/123 (45%), Gaps = 13/123 (10%)
Query: 504 GDNLVSGSQDRTVRQWDLNSGKCTQTIDISFATGPMRSQRNIPLRNSVLLTKEPPAIGAL 563
G + S +D V WD+ +G + G ++ P + L + +
Sbjct: 39 GQLITSALED--VNIWDIKTGDLVSKLSDGLPPGASDARGAKPAECTYLEAHKDTDL--- 93
Query: 564 QCFDAALATGTKDGIVRLWDLRSGKVVRMLEGHTDAITSLQFD--SVNLVTGAMDRSIRI 621
LA G DG++++WDL S V+ GH AIT LQFD L++G+ D +I +
Sbjct: 94 ------LAVGYADGVIKVWDLMSKTVLLNFNGHKAAITLLQFDGTGTRLISGSKDSNIIV 147
Query: 622 WDL 624
WDL
Sbjct: 148 WDL 150
Score = 52.8 bits (125), Expect = 2e-06
Identities = 36/127 (28%), Positives = 55/127 (42%), Gaps = 14/127 (11%)
Query: 396 HDEDITCLDFDMPFGTMCSAGSLDHSVKVWDLSKKKQIATLHGHLASISCMQIDQYSTLI 455
H IT L FD GT +GS D ++ VWDL + + L H SI+ LI
Sbjct: 120 HKAAITLLQFDGT-GTRLISGSKDSNIIVWDLVGEVGLYKLRSHKDSITGFWCQGEDWLI 178
Query: 456 TGGRDAVLKLWDIDKAMADEASNSSEDNDACLYTFDSHVDEITAISFDGDNLVSGSQDRT 515
+ +D ++KLWD+ C+ T +H E ++ D L++ D
Sbjct: 179 STSKDGMIKLWDL-------------KTHQCIETHIAHTGECWGLAVKDDLLITTGTDSQ 225
Query: 516 VRQWDLN 522
V+ W L+
Sbjct: 226 VKIWKLD 232
>At1g48630 [T] KOG0279 G protein beta subunit-like protein
Length = 326
Score = 67.8 bits (164), Expect = 5e-11
Identities = 70/268 (26%), Positives = 114/268 (42%), Gaps = 52/268 (19%)
Query: 395 AHDEDITCLDFDMPFGTMCSAGSLDHSVKVWDLSKK-------KQIATLHGHLASISCMQ 447
AH + +T + + + S D S+ +W L+K+ ++ T H H +
Sbjct: 13 AHTDMVTAIATPVDNSDVIVTSSRDKSIILWKLTKEDKSYGVAQRRMTGHSHFVQDVVLS 72
Query: 448 IDQYSTLITGGRDAVLKLWDIDKAMADEASNSSEDNDACLYTFDSHVDEITAISFDGDN- 506
D L +G D L+LWD+ A+ S F H ++ +++F DN
Sbjct: 73 SDGQFAL-SGSWDGELRLWDL-------ATGESTRR------FVGHTKDVLSVAFSTDNR 118
Query: 507 -LVSGSQDRTVRQWDLNSGKCTQTID-----------ISFA---------------TGPM 539
+VS S+DRT++ W+ G+C TI + F+ T +
Sbjct: 119 QIVSASRDRTIKLWN-TLGECKYTISEADGHKEWVSCVRFSPNTLVPTIVSASWDKTVKV 177
Query: 540 RSQRNIPLRNSVLLTKEPPAIGALQCFDAALATGTKDGIVRLWDLRSGKVVRMLEGHTDA 599
+ +N LRN++ A+ + A+G KDG++ LWDL GK + LE +
Sbjct: 178 WNLQNCKLRNTLAGHSGYLNTVAVSPDGSLCASGGKDGVILLWDLAEGKKLYSLEAGS-I 236
Query: 600 ITSLQFDSVNL-VTGAMDRSIRIWDLRT 626
I SL F + A + SIRIWDL +
Sbjct: 237 IHSLCFSPNRYWLCAATENSIRIWDLES 264
Score = 60.1 bits (144), Expect = 1e-08
Identities = 47/186 (25%), Positives = 90/186 (48%), Gaps = 28/186 (15%)
Query: 489 TFDSHVDEITAISFDGDN---LVSGSQDRTVRQWDLNSGKCTQTIDISFATGPMRSQRNI 545
T +H D +TAI+ DN +V+ S+D+++ W L D S+ R +
Sbjct: 10 TMCAHTDMVTAIATPVDNSDVIVTSSRDKSIILWKLTKE------DKSYGVAQRRMTGHS 63
Query: 546 PLRNSVLLTKEPPAIGALQCFDAALATGTKDGIVRLWDLRSGKVVRMLEGHTDAITSLQF 605
V+L+ + +G+ DG +RLWDL +G+ R GHT + S+ F
Sbjct: 64 HFVQDVVLSSD----------GQFALSGSWDGELRLWDLATGESTRRFVGHTKDVLSVAF 113
Query: 606 --DSVNLVTGAMDRSIRIWDLR---TGILSDVFAYEQPITSLHFD----LDKIVISNNEP 656
D+ +V+ + DR+I++W+ +S+ +++ ++ + F + IV ++ +
Sbjct: 114 STDNRQIVSASRDRTIKLWNTLGECKYTISEADGHKEWVSCVRFSPNTLVPTIVSASWDK 173
Query: 657 TVKIYN 662
TVK++N
Sbjct: 174 TVKVWN 179
>At1g10580 [S] KOG0282 mRNA splicing factor
Length = 616
Score = 67.8 bits (164), Expect = 5e-11
Identities = 53/249 (21%), Positives = 106/249 (42%), Gaps = 47/249 (18%)
Query: 430 KKQIATLHGHLASISCMQI--DQYSTLITGGRDAVLKLWDIDKAMADEASNSSEDNDACL 487
K+ + T GH +S ++ Q L++ G D +K+WD+ ++ C+
Sbjct: 272 KRLVHTWSGHTKGVSAIRFFPKQGHLLLSAGMDCKVKIWDV------------YNSGKCM 319
Query: 488 YTFDSHVDEITAISF--DGDNLVSGSQDRTVRQWDLNSGKCTQTIDISFATGPMRSQRNI 545
T+ H + I F DG ++ D+ ++ WD +G+ T F+TG +
Sbjct: 320 RTYMGHAKAVRDICFSNDGSKFLTAGYDKNIKYWDTETGQVIST----FSTGKI------ 369
Query: 546 PLRNSVLLTKEPPAIGALQCFDAA---LATGTKDGIVRLWDLRSGKVVRMLEGHTDAITS 602
P + L D L G D + WD+ +G+V + + H A+ +
Sbjct: 370 ------------PYVVKLNPDDDKQNILLAGMSDKKIVQWDINTGEVTQEYDQHLGAVNT 417
Query: 603 LQFDSVN--LVTGAMDRSIRIWDLRTGI----LSDVFAYEQPITSLHFDLDKIVISNNEP 656
+ F N VT + D+S+R+W+ + +S+ + P S+H + + + + +
Sbjct: 418 ITFVDNNRRFVTSSDDKSLRVWEFGIPVVIKYISEPHMHSMPSISVHPNGNWLAAQSLDN 477
Query: 657 TVKIYNRKD 665
+ IY+ ++
Sbjct: 478 QILIYSTRE 486
Score = 53.9 bits (128), Expect = 8e-07
Identities = 52/264 (19%), Positives = 103/264 (38%), Gaps = 32/264 (12%)
Query: 287 EYSSEDEENINGLSELSPKXXXXXXXX--XXXXXXPLENKEEEHSPLLSKSIYQQLQDHE 344
E S E+ E E+ P+ P K+E L++ + +DH
Sbjct: 159 ERSKEEREGEEKKEEIEPEAENPETEAWLRKNRKSPWSRKKEVVQGELTEEQKKYAEDHA 218
Query: 345 KKSDISERKKHSTSKKIKDVGVSHRNRRR----KTYPTLQQFYDSGSKITSLPK------ 394
KK + ++ + + D H + +++ + + + +PK
Sbjct: 219 KKKEEKGQQGETKGEHYADKSTFHGKEEKDYQGRSWIEAPKDAKANNDHCYIPKRLVHTW 278
Query: 395 -AHDEDITCLDFDMPFGTMCSAGSLDHSVKVWDL-SKKKQIATLHGHLASIS--CMQIDQ 450
H + ++ + F G + + +D VK+WD+ + K + T GH ++ C D
Sbjct: 279 SGHTKGVSAIRFFPKQGHLLLSAGMDCKVKIWDVYNSGKCMRTYMGHAKAVRDICFSNDG 338
Query: 451 YSTLITGGRDAVLKLWDIDKAMADEASNSSEDNDACLYTFDSHVDEITAISFDGDN---L 507
S +T G D +K WD + ++ + + + ++ D D L
Sbjct: 339 -SKFLTAGYDKNIKYWDTETGQVISTFSTGK------------IPYVVKLNPDDDKQNIL 385
Query: 508 VSGSQDRTVRQWDLNSGKCTQTID 531
++G D+ + QWD+N+G+ TQ D
Sbjct: 386 LAGMSDKKIVQWDINTGEVTQEYD 409
>7303631 [S] KOG0308 Conserved WD40 repeat-containing protein
Length = 680
Score = 67.4 bits (163), Expect = 7e-11
Identities = 57/238 (23%), Positives = 109/238 (44%), Gaps = 27/238 (11%)
Query: 415 AGSLDHSVKVWDLSKKKQIATLHGHLASISCMQIDQ-YSTLITGGRDAVLKLWDIDKAMA 473
+ S D +VKVW+ K ++TL H + + + + + G D + LWD++ A
Sbjct: 90 SASCDTTVKVWNAQKGFCMSTLRTHRDYVQALAYAKDREQVASAGLDKAIFLWDVNTLTA 149
Query: 474 DEASNSSEDNDACLYTFDSHVDEITAISFDGDNLVSGSQDRTVRQWDLNSGKCTQTIDIS 533
ASN++ + + DS A++ G +VSGS + +R WD + C + + +
Sbjct: 150 LTASNNTVTTSSLTGSKDSIYS--LAMNPSGTVIVSGSTENILRIWDPRT--CMRRMKLR 205
Query: 534 FATGPMRSQRNIPLRNSVLLTKEPPAIGALQCFDAALATGTKDGIVRLWDLRSGKVVRML 593
T +R P N V+ +G+ DG +++W+L + V+ +
Sbjct: 206 GHTENVRCLVVSPDGNQVV-------------------SGSSDGTIKVWNLGQQRCVQTI 246
Query: 594 EGHTDAITSLQFDS--VNLVTGAMDRSIRIWDLRTGILSDVFAYEQ-PITSLHFDLDK 648
H + + SL +++G+ DR+I + ++R + EQ P+ SL +++DK
Sbjct: 247 HVHKEGVWSLLMSENFQYIISGSRDRNIIVTEMRNPSNKTLVCEEQAPVLSLGYNIDK 304
Score = 61.2 bits (147), Expect = 5e-09
Identities = 48/222 (21%), Positives = 97/222 (43%), Gaps = 47/222 (21%)
Query: 439 HLASISCMQIDQYS-TLITGGRDAVLKLWDIDKAMADEASNSSEDNDACLYTFDSHVDEI 497
H ++ +Q+D + L + GRDA++++W+ ++ ++ + + + H D +
Sbjct: 27 HRNGVNALQLDANNGKLYSAGRDAIIRVWN----------TRTDSSEKYIQSMEHHNDWV 76
Query: 498 TAISF--DGDNLVSGSQDRTVRQWDLNSGKCTQTI------------------------- 530
I +G NL+S S D TV+ W+ G C T+
Sbjct: 77 NDIVLCCNGRNLISASCDTTVKVWNAQKGFCMSTLRTHRDYVQALAYAKDREQVASAGLD 136
Query: 531 ------DISFATGPMRSQRNIPLRNSVLLTKEPPAIGALQCFDAALATGTKDGIVRLWDL 584
D++ T + + N +S+ +K+ A+ + +G+ + I+R+WD
Sbjct: 137 KAIFLWDVNTLTA-LTASNNTVTTSSLTGSKDSIYSLAMNPSGTVIVSGSTENILRIWDP 195
Query: 585 RSGKVVRMLEGHTDAITSLQF--DSVNLVTGAMDRSIRIWDL 624
R+ L GHT+ + L D +V+G+ D +I++W+L
Sbjct: 196 RTCMRRMKLRGHTENVRCLVVSPDGNQVVSGSSDGTIKVWNL 237
Score = 53.9 bits (128), Expect = 8e-07
Identities = 38/149 (25%), Positives = 69/149 (45%), Gaps = 22/149 (14%)
Query: 394 KAHDEDITCLDFDMPFGTMCSAGSLDHSVKVWDLSKKKQI---------ATLHGHLASIS 444
+ H + + L + + SAG LD ++ +WD++ + ++L G SI
Sbjct: 112 RTHRDYVQALAYAKDREQVASAG-LDKAIFLWDVNTLTALTASNNTVTTSSLTGSKDSIY 170
Query: 445 CMQIDQYSTLI-TGGRDAVLKLWDIDKAMADEASNSSEDNDACLYTFDSHVDEITAISFD 503
+ ++ T+I +G + +L++WD M +N CL +S D
Sbjct: 171 SLAMNPSGTVIVSGSTENILRIWDPRTCMRRMKLRGHTENVRCL-----------VVSPD 219
Query: 504 GDNLVSGSQDRTVRQWDLNSGKCTQTIDI 532
G+ +VSGS D T++ W+L +C QTI +
Sbjct: 220 GNQVVSGSSDGTIKVWNLGQQRCVQTIHV 248
>SPAC630.14c [R] KOG0266 WD40 repeat-containing protein
Length = 586
Score = 67.0 bits (162), Expect = 9e-11
Identities = 45/151 (29%), Positives = 77/151 (50%), Gaps = 12/151 (7%)
Query: 397 DEDITCLDFDMPFGTMCSAGSLDHSVKVWDLSKKKQIATLHGHLASISCMQIDQYST-LI 455
D+ +T + F P G +AGSLD +++W S + LHGH S+ + L+
Sbjct: 417 DDGVTTVMFS-PDGQFIAAGSLDKVIRIWT-SSGTLVEQLHGHEESVYSVAFSPDGKYLV 474
Query: 456 TGGRDAVLKLWDIDKAMADEASNSSEDNDACLYTFDSHVDEITAISF--DGDNLVSGSQD 513
+G D +KLW++ + +++ A + ++ C TF H D I +++ DG ++SGS+D
Sbjct: 475 SGSLDNTIKLWEL-QCVSNVAPSMYKEGGICKQTFTGHKDFILSVTVSPDGKWIISGSKD 533
Query: 514 RTVRQWDLNSGKCTQTID------ISFATGP 538
RT++ W +S T+ IS A P
Sbjct: 534 RTIQFWSPDSPHSQLTLQGHNNSVISVAVSP 564
Score = 63.9 bits (154), Expect = 8e-10
Identities = 58/238 (24%), Positives = 99/238 (41%), Gaps = 26/238 (10%)
Query: 388 KITSLPKAHDEDITCLDFDMPFGTMCSAGSLDHSVKVWDLSKKKQIATLHGHLASISCMQ 447
++ L H+++I LDF T+ S GS D +V +WD+ +Q LH + M
Sbjct: 367 RVYRLLTGHEQEIYSLDFSKDGKTLVS-GSGDRTVCLWDVEAGEQKLILHTDDGVTTVMF 425
Query: 448 IDQYSTLITGGRDAVLKLWDIDKAMADEASNSSEDNDACLYTFDSHVDEITAISFDGDNL 507
+ G D V+++W + ++ E +Y+ A S DG L
Sbjct: 426 SPDGQFIAAGSLDKVIRIWTSSGTLVEQLHGHEES----VYS--------VAFSPDGKYL 473
Query: 508 VSGSQDRTVRQWDLNSGKCTQTIDIS-FATGPMRSQRNIPLRNSVLLTKEPPAIGALQCF 566
VSGS D T++ W+L +C + S + G + Q ++ +L P
Sbjct: 474 VSGSLDNTIKLWEL---QCVSNVAPSMYKEGGICKQTFTGHKDFILSVTVSPD------- 523
Query: 567 DAALATGTKDGIVRLWDLRSGKVVRMLEGHTDAITSLQFDSVN--LVTGAMDRSIRIW 622
+ +G+KD ++ W S L+GH +++ S+ TG+ D RIW
Sbjct: 524 GKWIISGSKDRTIQFWSPDSPHSQLTLQGHNNSVISVAVSPNGHCFATGSGDLRARIW 581
Score = 58.2 bits (139), Expect = 4e-08
Identities = 29/80 (36%), Positives = 46/80 (57%), Gaps = 2/80 (2%)
Query: 570 LATGTKDGIVRLWDLRSGKVVRMLEGHTDAITSLQF--DSVNLVTGAMDRSIRIWDLRTG 627
LATG +D +R+WD+ +V R+L GH I SL F D LV+G+ DR++ +WD+ G
Sbjct: 349 LATGVEDQQIRIWDIAQKRVYRLLTGHEQEIYSLDFSKDGKTLVSGSGDRTVCLWDVEAG 408
Query: 628 ILSDVFAYEQPITSLHFDLD 647
+ + +T++ F D
Sbjct: 409 EQKLILHTDDGVTTVMFSPD 428
>Hs5729852 [R] KOG0286 G-protein beta subunit
Length = 353
Score = 67.0 bits (162), Expect = 9e-11
Identities = 58/254 (22%), Positives = 100/254 (38%), Gaps = 55/254 (21%)
Query: 408 PFGTMCSAGSLDHSVKVWDLS---------KKKQIATLHGHLASISCMQIDQYSTLITGG 458
P G + G LD+ V+ L+ KKK +A +L++ S D ++T
Sbjct: 115 PSGCAIACGGLDNKCSVYPLTFDKNENMAAKKKSVAMHTNYLSACSFTNSDMQ--ILTAS 172
Query: 459 RDAVLKLWDIDKAMADEASNSSEDNDACLYTFDSHVDEITAISFDGDNLVSGSQDRTVRQ 518
D LWD++ ++ + + CL S G+ VSG D+
Sbjct: 173 GDGTCALWDVESGQLLQSFHGHGADVLCLDLAPSET---------GNTFVSGGCDKKAMV 223
Query: 519 WDLNSGKCTQTIDI---------------SFATG---------PMRSQRNIPLRNSVLLT 554
WD+ SG+C Q + +FA+G +R+ R + + +
Sbjct: 224 WDMRSGQCVQAFETHESDINSVRYYPSGDAFASGSDDATCRLYDLRADREV-----AIYS 278
Query: 555 KEPPAIGA----LQCFDAALATGTKDGIVRLWDLRSGKVVRMLEGHTDAITSLQF--DSV 608
KE GA L G D + +WD+ G V +L GH + +++L+ D
Sbjct: 279 KESIIFGASSVDFSLSGRLLFAGYNDYTINVWDVLKGSRVSILFGHENRVSTLRVSPDGT 338
Query: 609 NLVTGAMDRSIRIW 622
+G+ D ++R+W
Sbjct: 339 AFCSGSWDHTLRVW 352
>Hs5174447 [T] KOG0279 G protein beta subunit-like protein
Length = 317
Score = 67.0 bits (162), Expect = 9e-11
Identities = 74/282 (26%), Positives = 112/282 (39%), Gaps = 49/282 (17%)
Query: 394 KAHDEDITCLDFDMPFGTMCSAGSLDHSVKVWDLSKKKQI-----ATLHGHLASISCMQI 448
K H+ +T + F M + S D ++ +W L++ + L GH +S + I
Sbjct: 12 KGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVVI 71
Query: 449 DQYSTL-ITGGRDAVLKLWDIDKAMADEASNSSEDNDACLYTFDSHVDEITAISFDGDN- 506
++G D L+LWD+ F H ++ +++F DN
Sbjct: 72 SSDGQFALSGSWDGTLRLWDLTTGTTTRR-------------FVGHTKDVLSVAFSSDNR 118
Query: 507 -LVSGSQDRTVRQWDLNSGKCTQTIDISFATGPMRSQRNIP------------------- 546
+VSGS+D+T++ W+ G C T+ + + R P
Sbjct: 119 QIVSGSRDKTIKLWN-TLGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVW 177
Query: 547 -LRNSVLLTKEPPAIGALQCF----DAAL-ATGTKDGIVRLWDLRSGKVVRMLEGHTDAI 600
L N L T G L D +L A+G KDG LWDL GK + L+G D I
Sbjct: 178 NLANCKLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLDG-GDII 236
Query: 601 TSLQFDSVNL-VTGAMDRSIRIWDLRTGILSDVFAYEQPITS 641
+L F + A SI+IWDL I+ D E TS
Sbjct: 237 NALCFSPNRYWLCAATGPSIKIWDLEGKIIVDELKQEVISTS 278
>Hs20336270 [R] KOG0286 G-protein beta subunit
Length = 395
Score = 67.0 bits (162), Expect = 9e-11
Identities = 58/254 (22%), Positives = 100/254 (38%), Gaps = 55/254 (21%)
Query: 408 PFGTMCSAGSLDHSVKVWDLS---------KKKQIATLHGHLASISCMQIDQYSTLITGG 458
P G + G LD+ V+ L+ KKK +A +L++ S D ++T
Sbjct: 157 PSGCAIACGGLDNKCSVYPLTFDKNENMAAKKKSVAMHTNYLSACSFTNSDMQ--ILTAS 214
Query: 459 RDAVLKLWDIDKAMADEASNSSEDNDACLYTFDSHVDEITAISFDGDNLVSGSQDRTVRQ 518
D LWD++ ++ + + CL S G+ VSG D+
Sbjct: 215 GDGTCALWDVESGQLLQSFHGHGADVLCLDLAPSET---------GNTFVSGGCDKKAMV 265
Query: 519 WDLNSGKCTQTIDI---------------SFATG---------PMRSQRNIPLRNSVLLT 554
WD+ SG+C Q + +FA+G +R+ R + + +
Sbjct: 266 WDMRSGQCVQAFETHESDINSVRYYPSGDAFASGSDDATCRLYDLRADREV-----AIYS 320
Query: 555 KEPPAIGA----LQCFDAALATGTKDGIVRLWDLRSGKVVRMLEGHTDAITSLQF--DSV 608
KE GA L G D + +WD+ G V +L GH + +++L+ D
Sbjct: 321 KESIIFGASSVDFSLSGRLLFAGYNDYTINVWDVLKGSRVSILFGHENRVSTLRVSPDGT 380
Query: 609 NLVTGAMDRSIRIW 622
+G+ D ++R+W
Sbjct: 381 AFCSGSWDHTLRVW 394
>Hs11055998 [R] KOG0286 G-protein beta subunit
Length = 340
Score = 66.6 bits (161), Expect = 1e-10
Identities = 65/261 (24%), Positives = 104/261 (38%), Gaps = 52/261 (19%)
Query: 387 SKITSLPKAHDEDITCLDFDMPFGTMCSAGSLDHSVKVWDLSKK----KQIATLHGHLAS 442
+K+ ++P +TC P G + G LD+ +++L + + L GH
Sbjct: 88 NKMHAIPLRSSWVMTCAY--APSGNYVACGGLDNICSIYNLKTREGNVRVSRELPGHTGY 145
Query: 443 ISCMQIDQYSTLITGGRDAVLKLWDIDKAMADEASNSSEDNDACLYTFDSHVDEITAISF 502
+SC + S ++T D LWDI+ A TF H ++ ++S
Sbjct: 146 LSCCRFLDDSQIVTSSGDTTCALWDIETAQQTT-------------TFTGHSGDVMSLSL 192
Query: 503 DGD--NLVSGSQDRTVRQWDLNSGKCTQTIDISFATGPMRSQRNIPLRNSVLLTKEPPAI 560
D VSG+ D + + WD+ G C Q+ T I
Sbjct: 193 SPDMRTFVSGACDASSKLWDIRDGMCRQS-----------------------FTGHVSDI 229
Query: 561 GALQCF--DAALATGTKDGIVRLWDLRSGKVVRMLEGHTD---AITSLQFDSVN--LVTG 613
A+ F A ATG+ D RL+DLR+ + + +L H + ITS+ F L+ G
Sbjct: 230 NAVSFFPNGYAFATGSDDATCRLFDLRADQEL-LLYSHDNIICGITSVAFSKSGRLLLAG 288
Query: 614 AMDRSIRIWDLRTGILSDVFA 634
D + +WD G + V A
Sbjct: 289 YDDFNCNVWDTLKGDRAGVLA 309
>CE11748 [R] KOG0266 WD40 repeat-containing protein
Length = 395
Score = 66.6 bits (161), Expect = 1e-10
Identities = 63/301 (20%), Positives = 112/301 (36%), Gaps = 87/301 (28%)
Query: 377 PTLQQFYDSGSKITSLPKAHDEDITCLDFDMPFGTMCSAGSLDHSVKVW----------- 425
P+ + + + +P AH + I+ + F P G +GS D S+K+W
Sbjct: 87 PSAANLWPTYKLVAEIPNAHKKSISGIKFS-PDGRYMGSGSADCSIKIWRMDFVYEKTLM 145
Query: 426 ------------------------------DLSKKKQIATLHGHLASISCMQIDQYSTLI 455
D+S + + TL GH + C + TLI
Sbjct: 146 GHRLGINEFSWSSDSKLIVSCSDDKLVKVFDVSSGRCVKTLKGHTNYVFCCCFNPSGTLI 205
Query: 456 TGGR-DAVLKLWDIDKAMADEASNSSEDNDACLYTFDSHVDEITAISF--DGDNLVSGSQ 512
G D +++W N +++ H D ++++ F DG L SGS
Sbjct: 206 ASGSFDETIRIW-------------CARNGNTIFSIPGHEDPVSSVCFNRDGAYLASGSY 252
Query: 513 DRTVRQWDLNSGKCTQTIDISFATGPMRSQRNIPLRNSVLLTKEPPAIGALQCFDAA--L 570
D VR WD +G C +T L+ +E P I ++ +
Sbjct: 253 DGIVRIWDSTTGTCVKT----------------------LIDEEHPPITHVKFSPNGKYI 290
Query: 571 ATGTKDGIVRLWDLRSGKVVRMLEGHTDA--ITSLQFDSVN---LVTGAMDRSIRIWDLR 625
+ ++LWD + +V++ GH ++ + F +V+G+ D + IW+L+
Sbjct: 291 LASNLNNTLKLWDYQKLRVLKEYTGHENSKYCVAANFSVTGGKWIVSGSEDHKVYIWNLQ 350
Query: 626 T 626
T
Sbjct: 351 T 351
Score = 58.5 bits (140), Expect = 3e-08
Identities = 56/247 (22%), Positives = 107/247 (42%), Gaps = 43/247 (17%)
Query: 385 SGSKITSLPKAHDEDITCLDFDMPFGTMCSAGSLDHSVKVWDLSKKKQIATLHGHLASIS 444
SG + +L K H + C F+ P GT+ ++GS D ++++W I ++ GH +S
Sbjct: 179 SGRCVKTL-KGHTNYVFCCCFN-PSGTLIASGSFDETIRIWCARNGNTIFSIPGHEDPVS 236
Query: 445 --CMQIDQYSTLITGGRDAVLKLWDIDKAMADEASNSSEDNDACLYT-FDSHVDEITAIS 501
C D + L +G D ++++WD C+ T D IT +
Sbjct: 237 SVCFNRDG-AYLASGSYDGIVRIWD-------------STTGTCVKTLIDEEHPPITHVK 282
Query: 502 F--DGDNLVSGSQDRTVRQWDLNSGKCTQTIDISFATGPMRSQRNIPLRNSVLLTKEPPA 559
F +G +++ + + T++ WD + + TG S+ + SV K
Sbjct: 283 FSPNGKYILASNLNNTLKLWDYQKLRVLKEY-----TGHENSKYCVAANFSVTGGK---- 333
Query: 560 IGALQCFDAALATGTKDGIVRLWDLRSGKVVRMLEGHTDAITSLQ-FDSVNLVTGAM--- 615
+ +G++D V +W+L++ ++++ L+GH A+ N++ A
Sbjct: 334 ---------WIVSGSEDHKVYIWNLQTREILQTLDGHNTAVMCTDCHPGQNIIASAALEP 384
Query: 616 DRSIRIW 622
D I+IW
Sbjct: 385 DMRIKIW 391
>At5g40880 [R] KOG0274 Cdc4 and related F-box and WD-40 proteins
Length = 472
Score = 66.6 bits (161), Expect = 1e-10
Identities = 58/242 (23%), Positives = 99/242 (39%), Gaps = 37/242 (15%)
Query: 485 ACLYTFDSHVDEITAISFD--GDNLVSGSQDRTVRQWDLNSGKCTQTIDISFATGPMRSQ 542
A + + H ++I I+ D L S S D T+ WD NSG+C ++I++ G + S+
Sbjct: 178 AMVAALEGHKNDIKGIALPQGSDKLFSVSGDGTLLIWDCNSGQCVRSINLQAEAGSLISE 237
Query: 543 R--------------NIPLRNSVLLTKEPPAIGALQCFDAALATGTKDGIVRLWDLRSG- 587
N+ V L + A+ + L GT G + +W
Sbjct: 238 GPWVFLGLPNAVKAFNVQNSKDVHLEGVVGQVHAMTAANGMLFAGTSSGSILVWKATDSE 297
Query: 588 ----KVVRMLEG-HTDAITSLQFDSVNLVTGAMDRSIRIWDLRT-----------GILSD 631
K + LEG H+ +T L +G++D++I++WDL T G ++
Sbjct: 298 SDPFKYLTSLEGHHSGEVTCFVVGGEVLYSGSVDKTIKVWDLNTLQCRMTLKQHIGTVTS 357
Query: 632 VFAYEQPITSLHFD--LDKIVISNNEPTVKIYNRKD--GNHWFCGEDDPEQGNVDFVRYK 687
+ +++ + S D + S NE + RK H CG D E + F Y+
Sbjct: 358 LLCWDKCLISSSLDGTIKLWACSENESLKVVQTRKQELSVHTLCGMHDAEAKPIMFCSYQ 417
Query: 688 HG 689
+G
Sbjct: 418 NG 419
Score = 51.2 bits (121), Expect = 5e-06
Identities = 42/191 (21%), Positives = 80/191 (40%), Gaps = 39/191 (20%)
Query: 410 GTMCSAG-----SLDHSVKVWDLSKKKQIATLHGHLASISCMQIDQYSTLITGGRDAVLK 464
G++ S G L ++VK +++ K + L G + + M L G +
Sbjct: 232 GSLISEGPWVFLGLPNAVKAFNVQNSKDVH-LEGVVGQVHAMTAAN-GMLFAGTSSGSIL 289
Query: 465 LWDIDKAMADEASNSSEDNDACLYTFDSHVD-EITAISFDGDNLVSGSQDRTVRQWDLNS 523
+W +A++S D L + + H E+T G+ L SGS D+T++ WDLN+
Sbjct: 290 VW--------KATDSESDPFKYLTSLEGHHSGEVTCFVVGGEVLYSGSVDKTIKVWDLNT 341
Query: 524 GKCTQTIDISFATGPMRSQRNIPLRNSVLLTKEPPAIGALQCFDAALATGTKDGIVRLWD 583
+C T+ T + +L C+D L + + DG ++LW
Sbjct: 342 LQCRMTLKQHIGT-----------------------VTSLLCWDKCLISSSLDGTIKLWA 378
Query: 584 LRSGKVVRMLE 594
+ +++++
Sbjct: 379 CSENESLKVVQ 389
>Hs4758934 [I] KOG0301 Phospholipase A2-activating protein (contains WD40
repeats)
Length = 738
Score = 66.2 bits (160), Expect = 2e-10
Identities = 53/219 (24%), Positives = 96/219 (43%), Gaps = 45/219 (20%)
Query: 408 PFGTMCSAGSLDHSVKVWDLSKKKQIATLHGHLASISCMQIDQYSTLITGGRDAVLKLWD 467
P G + + G+ DH++ ++ L + L GH ++ + ++ TL++G D K+W
Sbjct: 24 PHGLIATGGN-DHNICIFSLDSPMPLYILKGHKNTVCSLSSGKFGTLLSGSWDTTAKVW- 81
Query: 468 IDKAMADEASNSSEDNDACLYTFDSHVDEITAISF--DGDNLVSGSQDRTVRQWDLNSGK 525
ND C+ T H + A+ + +++GS D+TV+ W +G+
Sbjct: 82 --------------LNDKCMMTLQGHTAAVWAVKILPEQGLMLTGSADKTVKLW--KAGR 125
Query: 526 CTQTIDISFATGPMRSQRNIPLRNSVLLTKEPPAIGALQCFDAALATGTKDGIVRLWDLR 585
C +T S +R +L++ L C D +R W +
Sbjct: 126 CERTF----------SGHEDCVRGLAILSETE----FLSC--------ANDASIRRWQI- 162
Query: 586 SGKVVRMLEGHTDAITSLQF--DSVNLVTGAMDRSIRIW 622
+G+ + + GHT+ I S+ + + VT A DRS+RIW
Sbjct: 163 TGECLEVYYGHTNYIYSISVFPNCRDFVTTAEDRSLRIW 201
>At3g49180 [R] KOG0646 WD40 repeat protein
Length = 438
Score = 66.2 bits (160), Expect = 2e-10
Identities = 54/214 (25%), Positives = 96/214 (44%), Gaps = 32/214 (14%)
Query: 410 GTMCSAGSLDHSVKVWDLSKKKQIATLHGHLASISCMQID-QYSTLITGGRDAVLKLWDI 468
GT G + + +W+++ K + HGH S++C+ S L++G +D +++W +
Sbjct: 90 GTYLVGGGISGDIYLWEVATGKLLKKWHGHYRSVTCLVFSGDDSLLVSGSQDGSIRVWSL 149
Query: 469 DKAMADEASNSSEDNDACLYTFDSHVDEIT--AISFDGDN--LVSGSQDRTVRQWDLNSG 524
+ D + N + F+ H +T I + G N ++S S+DRT + W L+ G
Sbjct: 150 IRLFDD--FQRQQGNTLYEHNFNEHTMSVTDIVIDYGGCNAVIISSSEDRTCKVWSLSRG 207
Query: 525 KCTQTI--------------DISFATGPMRSQRNIPLRNSV---------LLTKEPPAIG 561
K + I F G S+ I N+ ++++ AI
Sbjct: 208 KLLKNIIFPSVINALALDPGGCVFYAGARDSKIYIGAINATSEYGTQVLGSVSEKGKAIT 267
Query: 562 AL-QCFDA-ALATGTKDGIVRLWDLRSGKVVRML 593
L C D L +G++DG+V +WD +S + VR L
Sbjct: 268 CLAYCADGNLLISGSEDGVVCVWDPKSLRHVRTL 301
>7296187 [S] KOG0271 Notchless-like WD40 repeat-containing protein
Length = 481
Score = 66.2 bits (160), Expect = 2e-10
Identities = 49/181 (27%), Positives = 84/181 (46%), Gaps = 34/181 (18%)
Query: 486 CLYTFDSHVDEITAISF--DGDNLVSGSQDRTVRQWDLNS--------GKCTQTIDISFA 535
C + H + + +++F DG +L SGS D TVR WDLN+ G + +S+A
Sbjct: 104 CTSSMPGHAEAVVSLNFSPDGAHLASGSGDTTVRLWDLNTETPHFTCTGHKQWVLCVSWA 163
Query: 536 TGPMR------------------SQRNIPL---RNSVLLTKEPPAIGALQCFDAALATGT 574
R Q+ PL + + P +C A A+G
Sbjct: 164 PDGKRLASGCKAGSIIIWDPETGQQKGRPLSGHKKHINCLAWEPYHRDPECRKLASASG- 222
Query: 575 KDGIVRLWDLRSGKVVRMLEGHTDAITSLQFDSVNLV-TGAMDRSIRIWDLRTGILSDVF 633
DG R+WD++ G+ + + GHT+A+T++++ L+ T + DR++++W GIL F
Sbjct: 223 -DGDCRIWDVKLGQCLMNIAGHTNAVTAVRWGGAGLIYTSSKDRTVKMWRAADGILCRTF 281
Query: 634 A 634
+
Sbjct: 282 S 282
Score = 58.2 bits (139), Expect = 4e-08
Identities = 69/341 (20%), Positives = 124/341 (36%), Gaps = 102/341 (29%)
Query: 387 SKITSLPKAHDEDITCLDFDMPFGTMCSAGSLDHSVKVWDLSKKKQIATLHGHLASISCM 446
++ TS H E + L+F P G ++GS D +V++WDL+ + T GH + C+
Sbjct: 102 TRCTSSMPGHAEAVVSLNFS-PDGAHLASGSGDTTVRLWDLNTETPHFTCTGHKQWVLCV 160
Query: 447 Q-IDQYSTLITGGRDAVLKLWDIDKAMAD--------------------------EASNS 479
L +G + + +WD + + +++
Sbjct: 161 SWAPDGKRLASGCKAGSIIIWDPETGQQKGRPLSGHKKHINCLAWEPYHRDPECRKLASA 220
Query: 480 SEDNDA---------CLYTFDSHVDEITAISFDGDNLV-SGSQDRTVRQWDLNSGKCTQT 529
S D D CL H + +TA+ + G L+ + S+DRTV+ W G +T
Sbjct: 221 SGDGDCRIWDVKLGQCLMNIAGHTNAVTAVRWGGAGLIYTSSKDRTVKMWRAADGILCRT 280
Query: 530 I--------------DISFATGPMRSQRNIPLRNSVLLTKE-------------PPAIGA 562
D TGP ++ + L T+E P + +
Sbjct: 281 FSGHAHWVNNIALSTDYVLRTGPFHPVKDRSKSHLSLSTEELQESALKRYQAVCPDEVES 340
Query: 563 L-QCFD----------------------------------AALATGTKDGIVRLWDLRSG 587
L C D +A+ + D VRLW G
Sbjct: 341 LVSCSDDNTLYLWRNNQNKCVERMTGHQNVVNDVKYSPDVKLIASASFDKSVRLWRASDG 400
Query: 588 KVVRMLEGHTDAITSLQF--DSVNLVTGAMDRSIRIWDLRT 626
+ + GH A+ ++ + DS +V+G+ D ++++W ++T
Sbjct: 401 QYMATFRGHVQAVYTVAWSADSRLIVSGSKDSTLKVWSVQT 441
Score = 52.4 bits (124), Expect = 2e-06
Identities = 35/146 (23%), Positives = 67/146 (44%), Gaps = 19/146 (13%)
Query: 378 TLQQFYDSGSKITSLPKAHDEDITCLDFDMPFGTMCSAGSLDHSVKVWDLSKKKQIATLH 437
TL + ++ +K H + + + P + ++ S D SV++W S + +AT
Sbjct: 349 TLYLWRNNQNKCVERMTGHQNVVNDVKYS-PDVKLIASASFDKSVRLWRASDGQYMATFR 407
Query: 438 GHLASISCMQIDQYSTLI-TGGRDAVLKLWDID-KAMADEASNSSEDNDACLYTFDSHVD 495
GH+ ++ + S LI +G +D+ LK+W + K +A E H D
Sbjct: 408 GHVQAVYTVAWSADSRLIVSGSKDSTLKVWSVQTKKLAQE--------------LPGHAD 453
Query: 496 EITAISF--DGDNLVSGSQDRTVRQW 519
E+ + + DG + SG +D+ ++ W
Sbjct: 454 EVFGVDWAPDGSRVASGGKDKVIKLW 479
>SPBC713.04c [A] KOG0291 WD40-repeat-containing subunit of the 18S rRNA
processing complex
Length = 854
Score = 65.9 bits (159), Expect = 2e-10
Identities = 53/210 (25%), Positives = 102/210 (48%), Gaps = 40/210 (19%)
Query: 492 SHVDEITAISF--DGDNLVSGSQDRTVRQWDLNSGKC--TQTIDISFATGPMRSQRNIPL 547
SH D ++ + + DG +++G+ D ++ WD+NSG C T T S +G S+R L
Sbjct: 337 SHYDALSTLQYSSDGQRIITGADDGKIKVWDMNSGFCIVTFTQHTSAVSGLCFSKRGNVL 396
Query: 548 RNSVL---------------LTKEPPAIGALQCF-----DAALATGTKDGI-VRLWDLRS 586
+S L T P+ C + G++D + +W +++
Sbjct: 397 FSSSLDGSVRAWDLIRYRNFRTFTAPSRVQFSCIAVDPSGEIVCAGSQDSFEIFMWSVQT 456
Query: 587 GKVVRMLEGHTDAITSLQFDSVN--LVTGAMDRSIRIWDL--RTGIL------SDVFAYE 636
G+++ L GH ++SL F+S L +G+ D+++RIWD+ R+GI+ SDV +
Sbjct: 457 GQLLETLAGHEGPVSSLSFNSSGSLLASGSWDKTVRIWDIFSRSGIVEPLPIPSDVLS-- 514
Query: 637 QPITSLHFDLDKIVISNNEPTVKIYNRKDG 666
+ H D ++ +++ + + +N ++G
Sbjct: 515 ---LAFHPDGKEVCVASLDGQLTFWNVQEG 541
Score = 51.6 bits (122), Expect = 4e-06
Identities = 47/202 (23%), Positives = 79/202 (38%), Gaps = 39/202 (19%)
Query: 410 GTMCSAGSLDHSVKVWDLSKKKQIATLHG-HLASISCMQIDQYSTLITGGRDAVLKL--W 466
G + + SLD SV+ WDL + + T SC+ +D ++ G ++ W
Sbjct: 393 GNVLFSSSLDGSVRAWDLIRYRNFRTFTAPSRVQFSCIAVDPSGEIVCAGSQDSFEIFMW 452
Query: 467 DIDKAMADEASNSSEDNDACLYTFDSHVDEITAISFD--GDNLVSGSQDRTVRQWDLNSG 524
+ L T H ++++SF+ G L SGS D+TVR WD+ S
Sbjct: 453 SVQTGQL-------------LETLAGHEGPVSSLSFNSSGSLLASGSWDKTVRIWDIFSR 499
Query: 525 KCTQTIDISFATGPMRSQRNIPLRNSVLLTKEPPAIGALQCFDAALATGTKDGIVRLWDL 584
S P+ P+ + VL P + + DG + W++
Sbjct: 500 --------SGIVEPL------PIPSDVLSLAFHPD-------GKEVCVASLDGQLTFWNV 538
Query: 585 RSGKVVRMLEGHTDAITSLQFD 606
+ GK +++G D +FD
Sbjct: 539 QEGKQTSLIDGRKDLSGGRRFD 560
>CE11192 [A] KOG0291 WD40-repeat-containing subunit of the 18S rRNA
processing complex
Length = 925
Score = 65.9 bits (159), Expect = 2e-10
Identities = 54/218 (24%), Positives = 92/218 (41%), Gaps = 42/218 (19%)
Query: 413 CSAGSLDHSVKVWDLSKKKQIATLHGHLASISCMQIDQYSTLI-TGGRDAVLKLWDIDKA 471
C GS V VW+ + + H I+ + +L+ TG D +K+W+
Sbjct: 334 CGKGSTAQLV-VWEWQSESYVMKQQAHSLRITTAEYSPDGSLMATGAEDGKVKIWN---- 388
Query: 472 MADEASNSSEDNDACLYTFDSHVDEITAISF--DGDNLVSGSQDRTVRQWDLNSGKCTQT 529
S SS C TFD H +TA+ + G ++S S D TVR DL + +T
Sbjct: 389 -----SRSS----FCTVTFDEHTSGVTAVKWTQSGRAILSASLDGTVRAHDLKRYRNFRT 439
Query: 530 IDISFATGPMRSQRNIPLRNSVLLTKEPPAIGAL---QCFDAALATGTKDGIVRLWDLRS 586
L+ EP + L + D +A + + +W +
Sbjct: 440 ----------------------LVCPEPTQLATLAVDKAGDLVIAGAKEVFNIYIWSFET 477
Query: 587 GKVVRMLEGHTDAITSLQFDSVNLVTGAMDRSIRIWDL 624
G ++ +L GH AI+S+ ++V+G+ DR+I++W +
Sbjct: 478 GHLLDILSGHESAISSIDIHGNHIVSGSWDRTIKMWTI 515
>At3g18860 [I] KOG0301 Phospholipase A2-activating protein (contains WD40
repeats)
Length = 744
Score = 65.9 bits (159), Expect = 2e-10
Identities = 62/219 (28%), Positives = 93/219 (42%), Gaps = 44/219 (20%)
Query: 406 DMPFGTMCSAGSLDHSVKVWDLSKKKQIATLHGHLASISCMQIDQYSTLITGGRDAVLKL 465
+ P G + S GS+D V VW+L + I TL GH ++ + ID +++ D LK
Sbjct: 64 EYPEGRLVS-GSMDTFVFVWNLMNGENIQTLKGHQMQVTGVAIDN-EDIVSSSVDQTLKR 121
Query: 466 WDIDKAMADEASNSSEDNDACLYTFDSHVDEITA-ISFDGDNLVSGSQDRTVRQWDLNSG 524
W N + ++D+H I A I LVSGS D +++ W G
Sbjct: 122 W---------------RNGQLVESWDAHQSPIQAVIRLPSGELVSGSSDASLKLW---KG 163
Query: 525 KCTQTIDISFATGPMRSQRNIPLRNSVLLTKEPPAIGALQCFDAALATGTKDGIVRLWDL 584
K T +S T +R +P D + + DG +RLW L
Sbjct: 164 K-TSLQTLSGHTDTVRGLAVMP--------------------DLGFLSASHDGSIRLWAL 202
Query: 585 RSGKVVRMLEGHTDAITSLQFDSVNLVTGAM-DRSIRIW 622
SG+V+ + GHT + S+ S L+ A DR +IW
Sbjct: 203 -SGEVLLEMVGHTSLVYSVDAHSSGLIVSASEDRHAKIW 240
Score = 58.9 bits (141), Expect = 3e-08
Identities = 54/262 (20%), Positives = 112/262 (42%), Gaps = 49/262 (18%)
Query: 449 DQY--STLITGGRDAVLKLWDIDKAMADEASNSSEDNDACLYTFDSHVDEITAISFDGDN 506
D+Y L++G D + +W++ N + T H ++T ++ D ++
Sbjct: 63 DEYPEGRLVSGSMDTFVFVWNLM-------------NGENIQTLKGHQMQVTGVAIDNED 109
Query: 507 LVSGSQDRTVRQWDLNSGKCTQTIDISFATGPMRSQRNIPLRNSVLLTKEPPAIGALQCF 566
+VS S D+T+++W +G+ ++ D + P ++
Sbjct: 110 IVSSSVDQTLKRW--RNGQLVESWD----------------------AHQSPIQAVIRLP 145
Query: 567 DAALATGTKDGIVRLWDLRSGKVVRMLEGHTDAITSLQ-FDSVNLVTGAMDRSIRIWDLR 625
L +G+ D ++LW ++ ++ L GHTD + L + ++ + D SIR+W L
Sbjct: 146 SGELVSGSSDASLKLWKGKTS--LQTLSGHTDTVRGLAVMPDLGFLSASHDGSIRLWALS 203
Query: 626 TGILSDVFAYEQPITSLHFDLDKIVISNNEPT-VKIYNRKDGNHWFCGEDDPEQGNV-DF 683
+L ++ + + S+ +++S +E KI+ KDG C + G + D
Sbjct: 204 GEVLLEMVGHTSLVYSVDAHSSGLIVSASEDRHAKIW--KDG---VCVQSLEHPGCIWDA 258
Query: 684 VRYKHGYLVEGRSNGDINTWAI 705
+ G +V S+G + W +
Sbjct: 259 KFLETGDIVTACSDGVVRVWTV 280
>Hs4557229 [S] KOG0296 Angio-associated migratory cell protein (contains WD40
repeats)
Length = 452
Score = 65.5 bits (158), Expect = 3e-10
Identities = 60/247 (24%), Positives = 100/247 (40%), Gaps = 41/247 (16%)
Query: 396 HDEDITCLDFDMPFGTMCSAGSLDHSVKVWDLSKKKQIATLHGHLASISCMQIDQYSTLI 455
H + C+ D T+ G D VW LS + + GH S++C STL+
Sbjct: 108 HSASVFCVSLDPKTNTLAVTGGEDDKAFVWRLSDGELLFECAGHKDSVTCAGFSHDSTLV 167
Query: 456 -TGGRDAVLKLWDIDKAMADEASNSSEDNDACLYTFDSHVDEITAISFDGDNLVSGSQDR 514
TG +LK+W +D + E+ +++F++ E L++G+ D
Sbjct: 168 ATGDMSGLLKVWQVD---------TKEE----VWSFEAGDLEWMEWHPRAPVLLAGTADG 214
Query: 515 TVRQWDLNSGKCTQTIDISFATGPMRSQRNIPLRNSVLLTKEPPAIGALQCFDAALATGT 574
W + +G C GP N P +L A+ G
Sbjct: 215 NTWMWKVPNGDC------KTFQGP-----NCPATCGRVLPDGKRAV-----------VGY 252
Query: 575 KDGIVRLWDLRSGKVVRML---EGHTDAIT--SLQFDSVNLVTGAMDRSIRIWDLRTGIL 629
+DG +R+WDL+ G + +L EGH +T + D ++TG++D ++ TG +
Sbjct: 253 EDGTIRIWDLKQGSPIHVLKGTEGHQGPLTCVAANQDGSLILTGSVDCQAKLVSATTGKV 312
Query: 630 SDVFAYE 636
VF E
Sbjct: 313 VGVFRPE 319
>Hs11321585 [R] KOG0286 G-protein beta subunit
Length = 340
Score = 65.5 bits (158), Expect = 3e-10
Identities = 65/262 (24%), Positives = 104/262 (38%), Gaps = 58/262 (22%)
Query: 387 SKITSLPKAHDEDITCLDFDMPFGTMCSAGSLDHSVKVWDLSKK----KQIATLHGHLAS 442
+K+ ++P +TC P G + G LD+ +++L + + L GH
Sbjct: 88 NKVHAIPLRSSWVMTCAY--APSGNYVACGGLDNICSIYNLKTREGNVRVSRELAGHTGY 145
Query: 443 ISCMQIDQYSTLITGGRDAVLKLWDIDKAMADEASNSSEDNDACLYTFDSHVDEITAISF 502
+SC + + ++T D LWDI+ TF H ++ ++S
Sbjct: 146 LSCCRFLDDNQIVTSSGDTTCALWDIETGQQTT-------------TFTGHTGDVMSLSL 192
Query: 503 DGDN--LVSGSQDRTVRQWDLNSGKCTQTIDISFATGPMRSQRNIPLRNSVLLTKEPPAI 560
D VSG+ D + + WD+ G C QT T I
Sbjct: 193 APDTRLFVSGACDASAKLWDVREGMCRQT-----------------------FTGHESDI 229
Query: 561 GALQCF---DAALATGTKDGIVRLWDLRSGKVVRMLEGHTD---AITSLQFDSVN--LVT 612
A+ CF A ATG+ D RL+DLR+ + + M H + ITS+ F L+
Sbjct: 230 NAI-CFFPNGNAFATGSDDATCRLFDLRADQEL-MTYSHDNIICGITSVSFSKSGRLLLA 287
Query: 613 GAMDRSIRIWDL----RTGILS 630
G D + +WD R G+L+
Sbjct: 288 GYDDFNCNVWDALKADRAGVLA 309
>CE05372 [A] KOG0272 U4/U6 small nuclear ribonucleoprotein Prp4 (contains
WD40 repeats)
Length = 496
Score = 65.5 bits (158), Expect = 3e-10
Identities = 49/220 (22%), Positives = 92/220 (41%), Gaps = 39/220 (17%)
Query: 408 PFGTMCSAGSLDHSVKVWDLSKKKQIATLHGHLASISCMQID-QYSTLITGGRDAVLKLW 466
P G + D + +++DL+ KK++ GH S++ + S +TGG D ++W
Sbjct: 306 PNGHHLATACFDSTWRMYDLTTKKELLYQEGHSKSVADVAFHPDGSVALTGGHDCYGRVW 365
Query: 467 DIDKAMADEASNSSEDNDACLYTFDSHVDEITAISF--DGDNLVSGSQDRTVRQWDLNSG 524
D+ C+ D H EI ++ + +G +++GS D +++ WDL
Sbjct: 366 DMRTGR-------------CIMFLDGHTKEIHSVEWMPNGYEMITGSSDNSMKVWDLRMR 412
Query: 525 KCTQTIDISFATGPMRSQRNIPLRNSVLLTKEPPAIGALQCFDAALATGTKDGIVRLWDL 584
+ T T +P SV+ A G L + + D +++W
Sbjct: 413 RNTYT---------------MPAHTSVVTRVRADAAGQY------LVSASFDCTLKMWST 451
Query: 585 RSGKVVRMLEGHTDAITSLQF--DSVNLVTGAMDRSIRIW 622
+ +R L+GH I + D + + A DR+ ++W
Sbjct: 452 TGWQPLRQLQGHDTRILCVDISPDGQWMCSSAFDRTFKLW 491
Score = 63.2 bits (152), Expect = 1e-09
Identities = 51/218 (23%), Positives = 96/218 (43%), Gaps = 47/218 (21%)
Query: 421 SVKVWDLSKKKQIATLHGHLASISCMQI-------DQYSTL--ITGGRDAVLKLWDIDKA 471
SV VW + Q GH + C + + YS+L ++ D + LW + +
Sbjct: 227 SVAVWKREQCAQEIKFIGHSSQAGCARFHPGAFTQNDYSSLNVVSCSYDGTVLLWSLSQ- 285
Query: 472 MADEASNSSEDNDACLYTFDSHVDEITAISF--DGDNLVSGSQDRTVRQWDLNSGKCTQT 529
++ + + H ++ ++F +G +L + D T R +DL + K
Sbjct: 286 ------------ESPIGELEQHPQRVSKVAFHPNGHHLATACFDSTWRMYDLTTKK---- 329
Query: 530 IDISFATGPMRSQRNIPLRNSVLLTKEPPAIGALQCFDAALATGTKDGIVRLWDLRSGKV 589
++ + G +S ++ P AL TG D R+WD+R+G+
Sbjct: 330 -ELLYQEGHSKSVADVAFH--------PDGSVAL--------TGGHDCYGRVWDMRTGRC 372
Query: 590 VRMLEGHTDAITSLQF--DSVNLVTGAMDRSIRIWDLR 625
+ L+GHT I S+++ + ++TG+ D S+++WDLR
Sbjct: 373 IMFLDGHTKEIHSVEWMPNGYEMITGSSDNSMKVWDLR 410
>7297305 [T] KOG0279 G protein beta subunit-like protein
Length = 318
Score = 65.5 bits (158), Expect = 3e-10
Identities = 61/223 (27%), Positives = 94/223 (41%), Gaps = 44/223 (19%)
Query: 410 GTMCSAGSLDHSVKVWDLSKKKQIATLHGHLASISCMQIDQYST-LITGGRDAVLKLWDI 468
G +GS D ++++WDL+ K GH + + + +++G RD +KLW+
Sbjct: 76 GNYALSGSWDQTLRLWDLAAGKTTRRFEGHTKDVLSVAFSADNRQIVSGSRDKTIKLWN- 134
Query: 469 DKAMADEASNSSEDNDACLYTF--DSHVDEITAISFDGDN----LVSGSQDRTVRQWDLN 522
+A+ C +T D H D ++ + F ++ +VS DRTV+ W+L
Sbjct: 135 --TLAE-----------CKFTIQEDGHTDWVSCVRFSPNHSNPIIVSCGWDRTVKVWNLA 181
Query: 523 SGKCTQTIDISFATGPMRSQRNIPLRNSVLLTKEPPAIGALQCFDAALATGTKDGIVRLW 582
+ K + N N L T G+L +G KD LW
Sbjct: 182 NCKL---------------KNNHHGHNGYLNTVTVSPDGSL------CTSGGKDSKALLW 220
Query: 583 DLRSGKVVRMLEGHTDAITSLQFDSVNL-VTGAMDRSIRIWDL 624
DL GK + LE H D I +L F + A SI+IWDL
Sbjct: 221 DLNDGKNLYTLE-HNDIINALCFSPNRYWLCVAYGPSIKIWDL 262
Score = 59.7 bits (143), Expect = 1e-08
Identities = 45/177 (25%), Positives = 86/177 (48%), Gaps = 31/177 (17%)
Query: 453 TLITGGRDAVLKLWDIDKAMADEASNSSEDNDACLYTFDSHVDEITAISFDGDNLVSGSQ 512
T+I+ RD L +W + + DE +N LY + ++ +S DG+ +SGS
Sbjct: 30 TIISASRDKTLIVWKLTR---DEDTNYGYPQKR-LYGHSHFISDVV-LSSDGNYALSGSW 84
Query: 513 DRTVRQWDLNSGKCTQTIDISFATGPMRSQRNIPLRNSVLLTKEPPAIGALQCFDAALAT 572
D+T+R WDL +GK T+ + TK+ ++ A + + +
Sbjct: 85 DQTLRLWDLAAGKTTRRFEGH--------------------TKDVLSV-AFSADNRQIVS 123
Query: 573 GTKDGIVRLWD-LRSGKVVRMLEGHTDAITSLQFDSVN----LVTGAMDRSIRIWDL 624
G++D ++LW+ L K +GHTD ++ ++F + +V+ DR++++W+L
Sbjct: 124 GSRDKTIKLWNTLAECKFTIQEDGHTDWVSCVRFSPNHSNPIIVSCGWDRTVKVWNL 180
Score = 58.2 bits (139), Expect = 4e-08
Identities = 39/132 (29%), Positives = 69/132 (51%), Gaps = 17/132 (12%)
Query: 494 VDEITAISFDGDNLVSGSQDRTVRQWDLNSGKCTQTIDISFATGPMRSQRNIPLRNSVLL 553
V +I D D ++S S+D+T+ W K T+ D ++ R + + V+L
Sbjct: 18 VTQIATNPKDPDTIISASRDKTLIVW-----KLTRDEDTNYGYPQKRLYGHSHFISDVVL 72
Query: 554 TKEPPAIGALQCFDAALATGTKDGIVRLWDLRSGKVVRMLEGHTDAITSLQF--DSVNLV 611
+ + + AL+ G+ D +RLWDL +GK R EGHT + S+ F D+ +V
Sbjct: 73 SSDG---------NYALS-GSWDQTLRLWDLAAGKTTRRFEGHTKDVLSVAFSADNRQIV 122
Query: 612 TGAMDRSIRIWD 623
+G+ D++I++W+
Sbjct: 123 SGSRDKTIKLWN 134
>At4g25440_1 [R] KOG0274 Cdc4 and related F-box and WD-40 proteins
Length = 401
Score = 65.5 bits (158), Expect = 3e-10
Identities = 58/221 (26%), Positives = 94/221 (42%), Gaps = 41/221 (18%)
Query: 479 SSEDNDACLYTFDSHVDEITAISFDG--DNLVSGSQDRTVRQWDLNSGKCTQTIDISFAT 536
S D+ + L D H +T I+ D L + S+D TVR WD SG+CT +++
Sbjct: 129 SKGDSFSLLTQLDGHQKVVTGIALPSGSDKLYTASKDETVRIWDCASGQCTGVLNLGGEV 188
Query: 537 GPMRSQ------------RNIPLRNSVLLTKEPPA--IGALQCFDAALATGTKDGIVRLW 582
G + S+ + ++N+ L+ P + +L L GT+DG + +W
Sbjct: 189 GCIISEGPWLLVGMPNLVKAWNIQNNADLSLNGPVGQVYSLVVGTDLLFAGTQDGSILVW 248
Query: 583 DLRSG----KVVRMLEGHTDAITSLQFDSVNLVTGAMDRSIRIWDL-----------RTG 627
S L GHT A+ SL + L +GAMD SI++W L T
Sbjct: 249 RYNSTTSCFDPAASLLGHTLAVVSLYVGANRLYSGAMDNSIKVWSLDNLQCIQTLTEHTS 308
Query: 628 ILSDVFAYEQPITSLHFDLDKIVISNNEPTVKIYNRKDGNH 668
++ + ++Q + S D TVKI+ +G +
Sbjct: 309 VVMSLICWDQFLLSCSLD----------NTVKIWAATEGGN 339
>Hs19705568 [R] KOG0288 WD40 repeat protein TipD
Length = 293
Score = 65.1 bits (157), Expect = 4e-10
Identities = 56/224 (25%), Positives = 98/224 (43%), Gaps = 45/224 (20%)
Query: 418 LDHSVKVWDL--SKKKQIATLHGHLASISCMQIDQY-STLITGGRDAVLKLWDIDKAMAD 474
+D VK+W++ K + +L G A I+ ++ D S L+ D ++W +D
Sbjct: 1 MDRRVKLWEVFGEKCEFKGSLSGSNAGITSIEFDSAGSYLLAASNDFASRIWTVD----- 55
Query: 475 EASNSSEDNDACLYTFDSHVDEITAISFDGDN--LVSGSQDRTVRQWDLNSGKCTQTIDI 532
+ +T H ++ + F DN +VSGS DRT++ WDL S C +T+
Sbjct: 56 --------DYRLRHTLTGHSGKVLSAKFLLDNARIVSGSHDRTLKLWDLRSKVCIKTV-- 105
Query: 533 SFATGPMRSQRNIPLRNSVLLTKEPPAIGALQCFDAALATGTKDGIVRLWDLRSGKVVRM 592
FA + + C + + +G D +R WD+RS +VR
Sbjct: 106 -FAGS---------------------SCNDIVCTEQCVMSGHFDKKIRFWDIRSESIVRE 143
Query: 593 LE--GHTDAITSLQFDSVNLVTGAMDRSIRIWDLRTGILSDVFA 634
+E G A+ L + L++ + D +++ DLRT + F+
Sbjct: 144 MELLGKITAL-DLNPERTELLSCSRDDLLKVIDLRTNAIKQTFS 186
>CE06090 [T] KOG0279 G protein beta subunit-like protein
Length = 325
Score = 65.1 bits (157), Expect = 4e-10
Identities = 65/252 (25%), Positives = 107/252 (41%), Gaps = 53/252 (21%)
Query: 411 TMCSAGSLDHSVKVWDLSKK---------KQIATLHGHLASISCMQIDQYSTL-ITGGRD 460
T + S D ++ VWD+ + + +L GH +S + I ++G D
Sbjct: 31 TTVLSSSRDKTILVWDVDSVAPVDEGPIGRPVRSLTGHNHFVSDVVISSDGQFALSGSWD 90
Query: 461 AVLKLWDIDKAMADEASNSSEDNDACLYTFDSHVDEITAISFDGDN--LVSGSQDRTVRQ 518
L+LWD+++ ++ F SH ++ +++F DN +VSGS+D++++
Sbjct: 91 KTLRLWDLNQGVSTRQ-------------FISHTKDVLSVAFSADNRQIVSGSRDKSIKL 137
Query: 519 WDLNSGKCTQTIDISFATGPMRSQRNIP--------------------LRNSVLLTKEPP 558
W+ +C TI T + + R P L N L T
Sbjct: 138 WN-TLAQCKYTITDDCHTDWVSTVRFSPSNRDPVIVSAGWDKVVKVWNLGNCRLKTNHIG 196
Query: 559 AIGALQCF----DAAL-ATGTKDGIVRLWDLRSGKVVRMLEGHTDAITSLQFDSVNL-VT 612
G + D +L A+G KDG LWDL GK + L G+ D I ++ F +
Sbjct: 197 HTGYVNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLPGN-DVINAMSFSPNRYWLC 255
Query: 613 GAMDRSIRIWDL 624
A+ SI+IWDL
Sbjct: 256 AAVGSSIKIWDL 267
Score = 64.7 bits (156), Expect = 5e-10
Identities = 52/203 (25%), Positives = 91/203 (44%), Gaps = 33/203 (16%)
Query: 431 KQIATLHGH---LASISCMQIDQYSTLITGGRDAVLKLWDIDK-AMADEASNSSEDNDAC 486
K TL GH + I+ + +T+++ RD + +WD+D A DE
Sbjct: 7 KLTGTLEGHTGWVTQIATYTRNDKTTVLSSSRDKTILVWDVDSVAPVDEGPIGRPVRSL- 65
Query: 487 LYTFDSHVDEITAISFDGDNLVSGSQDRTVRQWDLNSGKCTQTIDISFATGPMRSQRNIP 546
T +H IS DG +SGS D+T+R WDLN G T
Sbjct: 66 --TGHNHFVSDVVISSDGQFALSGSWDKTLRLWDLNQGVST------------------- 104
Query: 547 LRNSVLLTKEPPAIGALQCFDAALATGTKDGIVRLWD-LRSGKVVRMLEGHTDAITSLQF 605
R + TK+ ++ A + + +G++D ++LW+ L K + HTD +++++F
Sbjct: 105 -RQFISHTKDVLSV-AFSADNRQIVSGSRDKSIKLWNTLAQCKYTITDDCHTDWVSTVRF 162
Query: 606 DSVN----LVTGAMDRSIRIWDL 624
N +V+ D+ +++W+L
Sbjct: 163 SPSNRDPVIVSAGWDKVVKVWNL 185
>At1g18080 [T] KOG0279 G protein beta subunit-like protein
Length = 327
Score = 65.1 bits (157), Expect = 4e-10
Identities = 64/270 (23%), Positives = 114/270 (41%), Gaps = 53/270 (19%)
Query: 394 KAHDEDITCLDFDMPFGTMCSAGSLDHSVKVWDLSK-------KKQIATLHGHLASISCM 446
+AH + +T + + + + S D S+ +W L+K ++ T H H +
Sbjct: 12 RAHTDMVTAIATPIDNADIIVSASRDKSIILWKLTKDDKAYGVAQRRLTGHSHFVEDVVL 71
Query: 447 QIDQYSTLITGGRDAVLKLWDIDKAMADEASNSSEDNDACLYTFDSHVDEITAISFDGDN 506
D L +G D L+LWD+ ++ F H ++ +++F DN
Sbjct: 72 SSDGQFAL-SGSWDGELRLWDLAAGVSTR-------------RFVGHTKDVLSVAFSLDN 117
Query: 507 --LVSGSQDRTVRQWDLNSGKCTQTID------------ISFATGPMR------------ 540
+VS S+DRT++ W+ G+C TI + F+ ++
Sbjct: 118 RQIVSASRDRTIKLWN-TLGECKYTISEGGEGHRDWVSCVRFSPNTLQPTIVSASWDKTV 176
Query: 541 ---SQRNIPLRNSVLLTKEPPAIGALQCFDAALATGTKDGIVRLWDLRSGKVVRMLEGHT 597
+ N LR+++ + A+ + A+G KDG+V LWDL GK + LE ++
Sbjct: 177 KVWNLSNCKLRSTLAGHTGYVSTVAVSPDGSLCASGGKDGVVLLWDLAEGKKLYSLEANS 236
Query: 598 DAITSLQFDSVNL-VTGAMDRSIRIWDLRT 626
I +L F + A + I+IWDL +
Sbjct: 237 -VIHALCFSPNRYWLCAATEHGIKIWDLES 265
Score = 55.8 bits (133), Expect = 2e-07
Identities = 39/140 (27%), Positives = 67/140 (47%), Gaps = 21/140 (15%)
Query: 489 TFDSHVDEITAISFDGDN---LVSGSQDRTVRQWDLNSGKCTQTIDISFATGPMRSQRNI 545
T +H D +TAI+ DN +VS S+D+++ W L D ++ R +
Sbjct: 10 TMRAHTDMVTAIATPIDNADIIVSASRDKSIILWKLTKD------DKAYGVAQRRLTGHS 63
Query: 546 PLRNSVLLTKEPPAIGALQCFDAALATGTKDGIVRLWDLRSGKVVRMLEGHTDAITSLQF 605
V+L+ + +G+ DG +RLWDL +G R GHT + S+ F
Sbjct: 64 HFVEDVVLSSD----------GQFALSGSWDGELRLWDLAAGVSTRRFVGHTKDVLSVAF 113
Query: 606 --DSVNLVTGAMDRSIRIWD 623
D+ +V+ + DR+I++W+
Sbjct: 114 SLDNRQIVSASRDRTIKLWN 133
Score = 54.7 bits (130), Expect = 5e-07
Identities = 61/271 (22%), Positives = 117/271 (42%), Gaps = 43/271 (15%)
Query: 332 LSKSIYQQLQDHEKKSDISERKKHSTSKKIKDVGVSHRNR------RRKTYPTLQQFYDS 385
LS S +L+ + + +S R+ +K + V S NR R +T +
Sbjct: 79 LSGSWDGELRLWDLAAGVSTRRFVGHTKDVLSVAFSLDNRQIVSASRDRTIKLWNTLGEC 138
Query: 386 GSKITSLPKAHDEDITCLDFDMPF--GTMCSAGSLDHSVKVWDLSKKKQIATLHGHLASI 443
I+ + H + ++C+ F T+ SA S D +VKVW+LS K +TL GH +
Sbjct: 139 KYTISEGGEGHRDWVSCVRFSPNTLQPTIVSA-SWDKTVKVWNLSNCKLRSTLAGHTGYV 197
Query: 444 SCMQIDQYSTLI-TGGRDAVLKLWDIDKAMADEASNSSEDNDACLYTFDSHVDEITAISF 502
S + + +L +GG+D V+ LWD+ + LY+ +++ I A+ F
Sbjct: 198 STVAVSPDGSLCASGGKDGVVLLWDLAEGKK-------------LYSLEAN-SVIHALCF 243
Query: 503 DGDNL-VSGSQDRTVRQWDLNSGKCTQTIDISFA--------TGPMRSQRNIPLRNSVLL 553
+ + + + ++ WDL S + + + +GP ++R + S+
Sbjct: 244 SPNRYWLCAATEHGIKIWDLESKSIVEDLKVDLKAEAEKADNSGPAATKRKVIYCTSLNW 303
Query: 554 TKEPPAIGALQCFDAALATGTKDGIVRLWDL 584
+ + + L +G DG++R+W +
Sbjct: 304 SAD----------GSTLFSGYTDGVIRVWGI 324
>7296245 [A] KOG0265 U5 snRNP-specific protein-like factor and related
proteins
Length = 347
Score = 65.1 bits (157), Expect = 4e-10
Identities = 56/242 (23%), Positives = 96/242 (39%), Gaps = 49/242 (20%)
Query: 394 KAHDEDITCLDFDMPFGTMCSAGSLDHSVKVWDLSKK-KQIATLHGHLASISCMQID-QY 451
+ H+ +I +F P G + + D + +W + + + + + GH ++
Sbjct: 52 EGHEGEIFTAEFH-PEGELLLSSGFDRQIYIWQVYEDCENVMAMSGHSGAVMEAHFTPDG 110
Query: 452 STLITGGRDAVLKLWDIDKAMADEASNSSEDNDACLYTFDSHVDEITAI--SFDGDNLV- 508
S + T D L WDI F H + + ++ S G L+
Sbjct: 111 SHIFTCSTDKTLAFWDIATGQRQRR-------------FKGHGNFVNSVQGSRRGQQLLC 157
Query: 509 SGSQDRTVRQWDLNSGKCTQTIDISFATGPMRSQRNIPLRNSVLLTKEPPAIGALQCFDA 568
SGS DRT++ WD T++ F + CF
Sbjct: 158 SGSDDRTIKIWDARKKHAAHTLESPFQVTAV-------------------------CFGD 192
Query: 569 A---LATGTKDGIVRLWDLRSGKVVRMLEGHTDAIT--SLQFDSVNLVTGAMDRSIRIWD 623
+ +G D V++WD+R V+ L GH+D IT SL + ++T AMD ++R+WD
Sbjct: 193 TGEQVISGGIDNEVKIWDIRKQAVLHHLRGHSDTITGMSLSPEGDFILTNAMDNTLRVWD 252
Query: 624 LR 625
+R
Sbjct: 253 VR 254
Score = 53.9 bits (128), Expect = 8e-07
Identities = 33/121 (27%), Positives = 54/121 (44%), Gaps = 16/121 (13%)
Query: 410 GTMCSAGSLDHSVKVWDLSKKKQIATLHGHLASISCMQID-QYSTLITGGRDAVLKLWDI 468
G +G +D+ VK+WD+ K+ + L GH +I+ M + + ++T D L++WD+
Sbjct: 194 GEQVISGGIDNEVKIWDIRKQAVLHHLRGHSDTITGMSLSPEGDFILTNAMDNTLRVWDV 253
Query: 469 DKAMADEASNSSEDNDACLYTFDSHVDEI------TAISFDGDNLVSGSQDRTVRQWDLN 522
+ C+ F H A S D + SGS DR V WD+N
Sbjct: 254 ---------RPYAPGERCVKVFQGHQHNFEKNLLRCAWSPGSDKITSGSADRHVYIWDVN 304
Query: 523 S 523
+
Sbjct: 305 T 305
>Hs4758032 [U] KOG0276 Vesicle coat complex COPI beta' subunit
Length = 906
Score = 64.7 bits (156), Expect = 5e-10
Identities = 45/163 (27%), Positives = 74/163 (44%), Gaps = 31/163 (19%)
Query: 414 SAGSLDHSVKVWDLSKKKQIATLHGHLASISCMQIDQYS-----TLITGGRDAVLKLWDI 468
++ SLD ++KVW L TL GH ++C ID YS LI+G D ++K+WD
Sbjct: 159 ASASLDRTIKVWQLGSSSPNFTLEGHEKGVNC--IDYYSGGDKPYLISGADDRLVKIWDY 216
Query: 469 DKAMADEASNSSEDNDACLYTFDSHVDEITAISFDGD--NLVSGSQDRTVRQWDLNSGKC 526
N C+ T + H ++ SF + +++GS+D TVR W ++ +
Sbjct: 217 -------------QNKTCVQTLEGHAQNVSCASFHPELPIIITGSEDGTVRIWHSSTYRL 263
Query: 527 TQTIDIS----FATGPMRSQRNIPLRNS-----VLLTKEPPAI 560
T++ + +R N+ L V L +E PA+
Sbjct: 264 ESTLNYGMERVWCVASLRGSNNVALGYDEGSIIVKLGREEPAM 306
>At4g02730 [R] KOG0266 WD40 repeat-containing protein
Length = 333
Score = 64.7 bits (156), Expect = 5e-10
Identities = 65/304 (21%), Positives = 126/304 (41%), Gaps = 63/304 (20%)
Query: 376 YPTLQQFYDSGSKITSLPKAHDEDITCLDFDMPFGTMCSAGSLDHSVKVWDL-SKKKQIA 434
Y + ++ S I+ L + D TC + S D ++++WD S + +
Sbjct: 75 YSLIHRYEGHSSGISDLAWSSDSHYTC------------SASDDCTLRIWDARSPYECLK 122
Query: 435 TLHGHLASISCMQIDQYSTLITGGR-DAVLKLWDIDKAMADEASNSSEDNDACLYTFDSH 493
L GH + C+ + S LI G D +++W++ C+ +H
Sbjct: 123 VLRGHTNFVFCVNFNPPSNLIVSGSFDETIRIWEVKTGK-------------CVRMIKAH 169
Query: 494 VDEITAISF--DGDNLVSGSQDRTVRQWDLNSGKCTQTIDISFATGPMRSQRNIPLRNSV 551
I+++ F DG +VS S D + + WD G C +T
Sbjct: 170 SMPISSVHFNRDGSLIVSASHDGSCKIWDAKEGTCLKT---------------------- 207
Query: 552 LLTKEPPAIGALQCFDAA--LATGTKDGIVRLWDLRSGKVVRMLEGHTDAITSL--QFDS 607
L+ + PA+ + + T D ++L + +GK +++ GHT+ + + F
Sbjct: 208 LIDDKSPAVSFAKFSPNGKFILVATLDSTLKLSNYATGKFLKVYTGHTNKVFCITSAFSV 267
Query: 608 VN---LVTGAMDRSIRIWDLRT-GILSDVFAYEQPITSL--HFDLDKIVISNN--EPTVK 659
N +V+G+ D + +WDL+ IL + + + S+ H ++I S N + T++
Sbjct: 268 TNGKYIVSGSEDNCVYLWDLQARNILQRLEGHTDAVISVSCHPVQNEISSSGNHLDKTIR 327
Query: 660 IYNR 663
I+ +
Sbjct: 328 IWKQ 331
>At1g62020 [U] KOG0292 Vesicle coat complex COPI alpha subunit
Length = 1216
Score = 64.7 bits (156), Expect = 5e-10
Identities = 61/232 (26%), Positives = 103/232 (44%), Gaps = 34/232 (14%)
Query: 415 AGSLDHSVKVWDLSKKKQIATLHGHLASISCMQI-DQYSTLITGGRDAVLKLWDIDKAMA 473
+G D+ +KVW+ + + TL GHL I +Q +Y +++ D +++W
Sbjct: 68 SGGDDYKIKVWNYKNHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIW------- 120
Query: 474 DEASNSSEDNDACLYTFDSHVDEITAISF--DGDNLVSGSQDRTVRQWDLNSGKCTQTID 531
+ + C+ H + SF D +VS S D+TVR WD+ + +
Sbjct: 121 ------NWQSRTCVSVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDIGA---LRKKT 171
Query: 532 ISFATGPMR-SQRNIPLRNSV------LLTKEPPAI--GALQCFDAALATGTKDGIVRLW 582
+S A MR +Q N L V +L + A + +G D V+LW
Sbjct: 172 VSPADDIMRLTQMNSDLFGGVDAIVKYVLEGHDRGVNWAAFHPTLPLIVSGADDRQVKLW 231
Query: 583 DLRSGKV--VRMLEGHTDAITSLQFDSVN--LVTGAMDRSIRIWDL--RTGI 628
+ K V L GH + ++S+ F + +V+ + D+SIR+WD RTG+
Sbjct: 232 RMNETKAWEVDTLRGHMNNVSSVMFHAKQDIIVSNSEDKSIRVWDATKRTGL 283
>Hs8922428 [S] KOG0271 Notchless-like WD40 repeat-containing protein
Length = 485
Score = 64.3 bits (155), Expect = 6e-10
Identities = 79/346 (22%), Positives = 141/346 (39%), Gaps = 73/346 (21%)
Query: 387 SKITSLPKAHDEDITCLDFDMPFGTMCSAGSLDHSVKVWDLSKKKQIATLHGHLA-SISC 445
++ TS + H E + + F P G ++GS D +V+ WDLS + T GH +S
Sbjct: 104 TRCTSSLEGHSEAVISVAFS-PTGKYLASGSGDTTVRFWDLSTETPHFTCKGHRHWVLSI 162
Query: 446 MQIDQYSTLITGGRDAVLKLWD------IDKAMADEA--------------------SNS 479
L +G ++ + LWD + + +A + ++S
Sbjct: 163 SWSPDGKKLASGCKNGQILLWDPSTGKQVGRTLAGHSKWITGLSWEPLHANPECRYVASS 222
Query: 480 SEDNDA---------CLYTFDSHVDEITAISFDGDNLV-SGSQDRTVRQWDLNSGKCTQT 529
S+D C H +T + + GD L+ S SQDRT++ W + G +T
Sbjct: 223 SKDGSVRIWDTTAGRCERILTGHTQSVTCLRWGGDGLLYSASQDRTIKVWRAHDGVLCRT 282
Query: 530 I--------------DISFATGPMR----SQRNIPLRNSVLLTKEPPAIGALQCFDAA-- 569
+ D + TG S L+ S+ KE AL ++
Sbjct: 283 LQGHGHWVNTMALSTDYALRTGAFEPAEASVNPQDLQGSLQELKE----RALSRYNLVRG 338
Query: 570 -----LATGTKDGIVRLWD-LRSGKVVRMLEGHTDAITSLQF--DSVNLVTGAMDRSIRI 621
L +G+ D + LW K + + GH I + F DS + + + D+SI++
Sbjct: 339 QGPERLVSGSDDFTLFLWSPAEDKKPLTRMTGHQALINQVLFSPDSRIVASASFDKSIKL 398
Query: 622 WDLRTG-ILSDVFAYEQPITSLHFDLDK--IVISNNEPTVKIYNRK 664
WD RTG L+ + + + + + D +V +++ T+K+++ K
Sbjct: 399 WDGRTGKYLASLRGHVAAVYQIAWSADSRLLVSGSSDSTLKVWDVK 444
Score = 62.0 bits (149), Expect = 3e-09
Identities = 69/319 (21%), Positives = 130/319 (40%), Gaps = 60/319 (18%)
Query: 385 SGSKITSLPKAHDEDITCLDFDM----PFGTMCSAGSLDHSVKVWDLSKKKQIATLHGHL 440
+G ++ H + IT L ++ P ++ S D SV++WD + + L GH
Sbjct: 187 TGKQVGRTLAGHSKWITGLSWEPLHANPECRYVASSSKDGSVRIWDTTAGRCERILTGHT 246
Query: 441 ASISCMQIDQYSTLITGGRDAVLKLW-----------------------DIDKAMAD--- 474
S++C++ L + +D +K+W D A+
Sbjct: 247 QSVTCLRWGGDGLLYSASQDRTIKVWRAHDGVLCRTLQGHGHWVNTMALSTDYALRTGAF 306
Query: 475 ---EASNSSEDNDACLYTFDSH-VDEITAISFDG-DNLVSGSQDRTVRQWDLNSGKCTQT 529
EAS + +D L + + G + LVSGS D T+ W K T
Sbjct: 307 EPAEASVNPQDLQGSLQELKERALSRYNLVRGQGPERLVSGSDDFTLFLWSPAEDKKPLT 366
Query: 530 IDISFATGPMRSQRNIPLRNSVLLTKEPPAIGALQCFDAALATGTKDGIVRLWDLRSGKV 589
R + L N VL + + + A+ + D ++LWD R+GK
Sbjct: 367 ----------RMTGHQALINQVLFSPDSRIV----------ASASFDKSIKLWDGRTGKY 406
Query: 590 VRMLEGHTDAITSLQF--DSVNLVTGAMDRSIRIWDLRTGILS-DVFAYEQPITSLHFDL 646
+ L GH A+ + + DS LV+G+ D ++++WD++ L+ D+ + + ++ +
Sbjct: 407 LASLRGHVAAVYQIAWSADSRLLVSGSSDSTLKVWDVKAQKLAMDLPGHADEVYAVDWSP 466
Query: 647 D--KIVISNNEPTVKIYNR 663
D ++ + ++I+ R
Sbjct: 467 DGQRVASGGKDKCLRIWRR 485
>Hs7706657 [S] KOG0282 mRNA splicing factor
Length = 579
Score = 63.9 bits (154), Expect = 8e-10
Identities = 65/292 (22%), Positives = 119/292 (40%), Gaps = 52/292 (17%)
Query: 430 KKQIATLHGHLASISCMQIDQYS--TLITGGRDAVLKLWDIDKAMADEASNSSEDNDACL 487
KKQI GH +S +++ S L++ D +KLW++ CL
Sbjct: 278 KKQIHVWSGHTKGVSAVRLFPLSGHLLLSCSMDCKIKLWEV------------YGERRCL 325
Query: 488 YTFDSHVDEITAISFD--GDNLVSGSQDRTVRQWDLNSGKCTQTIDISFATGPMRSQRNI 545
TF H + I F+ G +S + DR ++ WD +G+C + R +
Sbjct: 326 RTFIGHSKAVRDICFNTAGTQFLSAAYDRYLKLWDTETGQCISRF----------TNRKV 375
Query: 546 PLRNSVLLTKEPPAIGALQCFDAALATGTKDGIVRLWDLRSGKVVRMLEGHTDAITSLQF 605
P K P F A G D + WD+RSG++V+ + H A+ ++ F
Sbjct: 376 PY-----CVKFNPDEDKQNLFVA----GMSDKKIVQWDIRSGEIVQEYDRHLGAVNTIVF 426
Query: 606 DSVN--LVTGAMDRSIRIWDLRTGI----LSDVFAYEQPITSLHFDLDKIVISNNEPTVK 659
N V+ + D+S+R+W+ + +++ + P +L + + + + +
Sbjct: 427 VDENRRFVSTSDDKSLRVWEWDIPVDFKYIAEPSMHSMPAVTLSPNGKWLACQSMDNQIL 486
Query: 660 IYNRKDGNHWFCGEDDPEQGN--------VDFVRYKHGYLVEGRSNGDINTW 703
I+ + N + + +G+ VDF Y++ G NG +N W
Sbjct: 487 IFGAQ--NRFRLNKKKIFKGHMVAGYACQVDF-SPDMSYVISGDGNGKLNIW 535
>CE18578 [A] KOG0265 U5 snRNP-specific protein-like factor and related
proteins
Length = 331
Score = 63.9 bits (154), Expect = 8e-10
Identities = 52/201 (25%), Positives = 82/201 (39%), Gaps = 36/201 (17%)
Query: 411 TMCSAGSLDHSVKVWDLSKKKQIATLHGHLASISCMQIDQYSTLITGGRDAVLKLWDIDK 470
T+ ++ S D + +V D+ K+ + T + D +I+GG D VLK+WD+ +
Sbjct: 137 TLVASASDDGTCRVHDMRTKEPVKTYTNRYQQTAVTFNDSSDQVISGGIDNVLKVWDMRR 196
Query: 471 AMADEASNSSEDNDACLYTFDSHVDEITAISF--DGDNLVSGSQDRTVRQWDLNSGKCTQ 528
D YT H D IT IS G ++S S D TVRQWD+ Q
Sbjct: 197 -------------DEITYTLTGHRDTITGISLSPSGKFIISNSMDCTVRQWDIRPFVPGQ 243
Query: 529 TIDISFATGPMRSQRNIPLRNSVLLTKEPPAIGALQC----FDAALATGTKDGIVRLWDL 584
FA ++N+ L+C + + G+ D + +W+
Sbjct: 244 RSVGVFAGHNHNFEKNL-----------------LKCSWSPCERFITAGSSDRFLYVWET 286
Query: 585 RSGKVVRMLEGHTDAITSLQF 605
S K+V L GH ++ F
Sbjct: 287 LSKKIVYKLPGHMGSVNCTDF 307
Score = 62.0 bits (149), Expect = 3e-09
Identities = 51/225 (22%), Positives = 98/225 (42%), Gaps = 42/225 (18%)
Query: 408 PFGTMCSAGSLDHSVKVWDL-SKKKQIATLHGHLASISCMQID-QYSTLITGGRDAVLKL 465
P GT + D + W++ + + +T+ GH ++ ++ S+L++ G D +++
Sbjct: 48 PDGTCLATSGYDQKIFFWNVYGECENFSTIKGHSGAVMDLKFTTDSSSLVSCGTDKSVRV 107
Query: 466 WDIDKAMADEASNSSEDNDACLYTFDSHVDEITAI--SFDGDNLV-SGSQDRTVRQWDLN 522
WD+ + C F +H D + A+ S G LV S S D T R D+
Sbjct: 108 WDM-------------ETGTCARRFRTHTDFVNAVHPSRRGVTLVASASDDGTCRVHDMR 154
Query: 523 SGKCTQTIDISFATGPMRSQRNIPLRNSVLLTKEPPAIGALQCFDAALATGTKDGIVRLW 582
+ + P+++ N + +V + +G D ++++W
Sbjct: 155 TKE------------PVKTYTNRYQQTAVTFNDSSDQV----------ISGGIDNVLKVW 192
Query: 583 DLRSGKVVRMLEGHTDAIT--SLQFDSVNLVTGAMDRSIRIWDLR 625
D+R ++ L GH D IT SL +++ +MD ++R WD+R
Sbjct: 193 DMRRDEITYTLTGHRDTITGISLSPSGKFIISNSMDCTVRQWDIR 237
>At2g46290 [JT] KOG0643 Translation initiation factor 3 subunit i
(eIF-3i)/TGF-beta receptor-interacting protein (TRIP-1)
Length = 328
Score = 63.9 bits (154), Expect = 8e-10
Identities = 49/201 (24%), Positives = 88/201 (43%), Gaps = 40/201 (19%)
Query: 482 DNDACLYTFDSHVDEITA--ISFDGDNLVSGSQDRTVRQWDLNSGKCTQTI-------DI 532
DN L T+ H + IS D L++GS D+T + WD+ SGK T +
Sbjct: 40 DNGERLGTYRGHSGAVWCCDISRDSSRLITGSADQTAKLWDVKSGKELFTFKFGAPARSV 99
Query: 533 SFATGP---------------------MRSQRNIPLRNSVLLTKEPPAIGALQC-----F 566
F+ G + + +SVL+ + P +
Sbjct: 100 DFSVGDHLAVITTDHFVGTSSAIHVKRIAEDPEDQVGDSVLVLQSPDGKKKINRAVWGPL 159
Query: 567 DAALATGTKDGIVRLWDLRSGKVVRMLE---GHTDAITSL--QFDSVNLVTGAMDRSIRI 621
+ + +G +D +R+WD +GK+++ + GH +AITSL D + +TG+ D++ ++
Sbjct: 160 NQTIVSGGEDAAIRIWDAETGKLLKQSDEEVGHKEAITSLCKAADDSHFLTGSHDKTAKL 219
Query: 622 WDLRTGILSDVFAYEQPITSL 642
WD+RT L + P+ ++
Sbjct: 220 WDMRTLTLIKTYTTVVPVNAV 240
>At1g73720 [R] KOG0275 Conserved WD40 repeat-containing protein
Length = 522
Score = 63.9 bits (154), Expect = 8e-10
Identities = 45/174 (25%), Positives = 84/174 (47%), Gaps = 18/174 (10%)
Query: 496 EITAISFDGDNLVSGSQDRTVRQWDLNSGKCTQTIDISFATGPMRSQRNIPLRNSVLLTK 555
E S DG L S S D + WD SGK + D+ + S ++
Sbjct: 228 ECARFSPDGQFLASSSVDGFIEVWDYISGKLKK--DLQYQAD-----------ESFMMHD 274
Query: 556 EPPAIGALQCFDAALATGTKDGIVRLWDLRSGKVVRMLEGHTDAITSLQF--DSVNLVTG 613
+P LA+G++DG +++W +R+G +R + H+ +TSL F D L++
Sbjct: 275 DPVLCIDFSRDSEMLASGSQDGKIKIWRIRTGVCIRRFDAHSQGVTSLSFSRDGSQLLST 334
Query: 614 AMDRSIRIWDLRTG-ILSDVFAYEQPITSLHFDLD--KIVISNNEPTVKIYNRK 664
+ D++ RI L++G +L + + + F D +I+ ++++ TVK+++ K
Sbjct: 335 SFDQTARIHGLKSGKLLKEFRGHTSYVNHAIFTSDGSRIITASSDCTVKVWDSK 388
>7300980 [R] KOG4155 FOG: WD40 repeat
Length = 743
Score = 63.9 bits (154), Expect = 8e-10
Identities = 56/239 (23%), Positives = 101/239 (41%), Gaps = 44/239 (18%)
Query: 394 KAHDEDITCLDFDMPFGTMCSAGSLDHSVKVWDLSKKKQIATLHGHLASISCMQ---IDQ 450
+ H + +T + F + M S S D +++ W A H I C+ + Q
Sbjct: 494 RGHTKGVTDVRFSAHYPLMYSV-SKDATMRCWRAHNLHCAAIYRSHNYPIWCLDESPVGQ 552
Query: 451 YSTLITGGRDAVLKLWDIDKAMADEASNSSEDNDACLYTFDSHVDEITAISF--DGDNLV 508
Y ++TG +D +LW ++K A L + H ++ ++F +G+ +
Sbjct: 553 Y--VVTGSKDLSARLWSLEKEHA-------------LIIYAGHTQDVECVAFHPNGNYIA 597
Query: 509 SGSQDRTVRQWDLNSGKCTQTIDISFATGPMRSQRNIPLRNSVLLTKEPPAIGALQCFDA 568
+GS D +VR W SGK + R +V P
Sbjct: 598 TGSADHSVRLWCATSGKLMRVF--------------ADCRQAVTQLAFSPD-------GK 636
Query: 569 ALATGTKDGIVRLWDLRSGKVVRMLEGHTDAITSLQFDSVN--LVTGAMDRSIRIWDLR 625
LA ++ VR++DL +G + L+ H+ +I+SL + + N L T D ++R+WD++
Sbjct: 637 MLAAAGEETKVRIFDLAAGAQLAELKDHSASISSLSWSTHNRHLATACSDGTLRLWDIK 695
>SPBC3D6.12 [A] KOG0306 WD40-repeat-containing subunit of the 18S rRNA
processing complex
Length = 922
Score = 63.5 bits (153), Expect = 1e-09
Identities = 75/300 (25%), Positives = 128/300 (42%), Gaps = 45/300 (15%)
Query: 381 QFYD-SGSKITSLPKAHDEDITCLDFDMPFGTMCSAGSLDHSVKVWDLSKKKQIATLHGH 439
+ YD + S + +AHD I L GT + S DH+VK+W L K + G
Sbjct: 460 EVYDIASSSLIERIQAHDGAIWDLAVGHD-GTYFATASADHTVKLWSL--KSSFDFVPGT 516
Query: 440 LASISCMQIDQYSTLITGGRDAVLKLWDIDKAMADEASNSSEDNDACLYTFDS------- 492
++ ++++Q + +K+ + +A S DN +Y DS
Sbjct: 517 TRKVTTLKLEQTRQIDFTDDVLAVKISPDGRFVAA----SLLDNTVKVYYLDSLKFFLNL 572
Query: 493 --HVDEITA--ISFDGDNLVSGSQDRTVRQWDLNSGKCTQTIDISFATGPMRSQRNIPLR 548
H + + IS+D LV+ S D+ V+ W L+ G C ++I FA +
Sbjct: 573 YGHKLPVLSMDISYDSKLLVTCSADKNVKIWGLDFGDCHKSI---FAH-----------Q 618
Query: 549 NSVL-LTKEPPAIGALQCFDAALATGTKDGIVRLWDLRSGKVVRMLEGHTDAITSLQFDS 607
+S++ +T +P C +KD VR WD +S ++ L GH + +L
Sbjct: 619 DSIMEVTFQPDTYNFFTC--------SKDREVRYWDGKSFDLILKLRGHHSEVWALAVGP 670
Query: 608 VNLVTGAMDRSIRIWDLRTGILSDVFAYEQPITSLHFDLDKIVISNNEPTVKIYNRKDGN 667
+V+G+ D SIR+W+ + VF E+ L + ++S+ E KDG+
Sbjct: 671 TFVVSGSHDHSIRLWEQGDDL---VFLEEERERELEEQYESTLVSSYENAEADGEVKDGD 727
Score = 52.0 bits (123), Expect = 3e-06
Identities = 30/83 (36%), Positives = 47/83 (56%), Gaps = 7/83 (8%)
Query: 566 FDAALATGTKDGIVRLWDLRSGKVVRMLEGHTDAITSLQFDSV--NLVTGAMDRSIRIWD 623
FD A G DG +RLW + G+++ L GH A+T++ FD + L +G+MD I +WD
Sbjct: 75 FDEMYAVGYADGSIRLW--KDGELLITLNGHKSAVTTMDFDKMGTRLASGSMDTDIIVWD 132
Query: 624 L--RTGILSDVFAYEQPITSLHF 644
+ TG+ + ++ IT L F
Sbjct: 133 IVAETGLFR-LRGHKDQITKLLF 154
>ECU01g1290 [U] KOG0292 Vesicle coat complex COPI alpha subunit
Length = 983
Score = 63.5 bits (153), Expect = 1e-09
Identities = 47/206 (22%), Positives = 86/206 (40%), Gaps = 22/206 (10%)
Query: 385 SGSKITSLPKAHDEDITCLDFDMPFGTMCSAGSLDHSVKVWDLSKKKQIATLHGHLASIS 444
S ++T+ K HD+ + LDF P + S D ++ VW++ K +AT GH +
Sbjct: 86 SERRVTNRLKGHDDFVRSLDFH-PTKPWILSASDDQTIMVWNMLTGKLLATARGHCHYVM 144
Query: 445 CMQIDQYSTLITGGRDAVLKLWDIDKAMADEASNSSEDNDACLYTFDSHVDEITAISFDG 504
+ ++++G D +++WD NS + D H I AI+ G
Sbjct: 145 AARFLGEESIVSGSLDQSIRVWDCKGLKEGSKKNSLLPDIVIKQIVDGHDRGINAIAVRG 204
Query: 505 DNLVSGSQDRTVRQWDLNSGKCTQTIDISFATGPMRSQRNIPLRNSVLLTKEPPAIGALQ 564
+ VSG DR ++ W+ + + V+ + P G L
Sbjct: 205 EVFVSGGDDRDIKCWEWSETSVWE--------------------KEVMYNHQGPVTGLLC 244
Query: 565 CFDAALATGTKDGIVRLWDLRSGKVV 590
+ L++G +DG+ ++++ S K V
Sbjct: 245 DGNHVLSSG-EDGLFSIYNMESRKSV 269
>At5g49200 [R] KOG0274 Cdc4 and related F-box and WD-40 proteins
Length = 419
Score = 63.5 bits (153), Expect = 1e-09
Identities = 60/248 (24%), Positives = 106/248 (42%), Gaps = 46/248 (18%)
Query: 485 ACLYTFDSHVDEITAISFD--GDNLVSGSQDRTVRQWDLNSGKCTQTIDISFATGPMRSQ 542
A + + + H E+ I+ D L S S D T+R WD NSG+C +I++ G + S+
Sbjct: 122 AMVASLEGHNKELKGIALPEGSDKLFSVSIDGTLRVWDCNSGQCVHSINLDAEAGSLISE 181
Query: 543 RN---IPLRNSVLLTKEPPA-------------IGALQCFDAALATGTKDGIVRLWDLRS 586
+ L N++ + + A+ + L GT G + +W +
Sbjct: 182 GPWVFLGLPNAIKAFNVQTSQDLHLQAAGVVGQVNAMTIANGMLFAGTSSGSILVWKATT 241
Query: 587 G------KVVRMLEGHTDAITSLQFDSVNLVTGAMDRSIRIWDLRTGILSDVFAYEQ--- 637
K + LEGH+ +T L +G++D++I++WDL T L + +Q
Sbjct: 242 DSESDPFKYLTSLEGHSGEVTCFAVGGQMLYSGSVDKTIKMWDLNT--LQCIMTLKQHTG 299
Query: 638 PITSLHFDLDKIVISNN-EPTVKIY---------------NRKDGNHWFCGEDDPEQGNV 681
+TSL DK +IS++ + T+K++ + H G D E +
Sbjct: 300 TVTSL-LCWDKCLISSSLDGTIKVWAYSENGILKVVQTRRQEQSSVHALSGMHDAEAKPI 358
Query: 682 DFVRYKHG 689
F Y++G
Sbjct: 359 IFCSYQNG 366
Score = 54.7 bits (130), Expect = 5e-07
Identities = 42/198 (21%), Positives = 83/198 (41%), Gaps = 37/198 (18%)
Query: 403 LDFDMPFGTMCSAG-----SLDHSVKVWDLSKKKQI-ATLHGHLASISCMQIDQYSTLIT 456
++ D G++ S G L +++K +++ + + G + ++ M I L
Sbjct: 169 INLDAEAGSLISEGPWVFLGLPNAIKAFNVQTSQDLHLQAAGVVGQVNAMTIAN-GMLFA 227
Query: 457 GGRDAVLKLWDIDKAMADEASNSSEDNDACLYTFDSHVDEITAISFDGDNLVSGSQDRTV 516
G + +W KA D S D L + + H E+T + G L SGS D+T+
Sbjct: 228 GTSSGSILVW---KATTD----SESDPFKYLTSLEGHSGEVTCFAVGGQMLYSGSVDKTI 280
Query: 517 RQWDLNSGKCTQTIDISFATGPMRSQRNIPLRNSVLLTKEPPAIGALQCFDAALATGTKD 576
+ WDLN+ +C T L + + +L C+D L + + D
Sbjct: 281 KMWDLNTLQCIMT-----------------------LKQHTGTVTSLLCWDKCLISSSLD 317
Query: 577 GIVRLWDLRSGKVVRMLE 594
G +++W ++++++
Sbjct: 318 GTIKVWAYSENGILKVVQ 335
>At5g16750 [A] KOG0319 WD40-repeat-containing subunit of the 18S rRNA
processing complex
Length = 876
Score = 63.5 bits (153), Expect = 1e-09
Identities = 42/149 (28%), Positives = 67/149 (44%), Gaps = 21/149 (14%)
Query: 388 KITSLPKAHDEDITCLDFDMPFGTMCSAGSLDHSVKVWDLSKKKQIATLHGH---LASIS 444
K S+ AHD+DI + +C+ GS D + +W L + TL GH + S+
Sbjct: 490 KTRSVVAAHDKDINSVAVARNDSLVCT-GSEDRTASIWRLPDLVHVVTLKGHKRRIFSVE 548
Query: 445 CMQIDQYSTLITGGRDAVLKLWDIDKAMADEASNSSEDNDACLYTFDSHVDEITAISF-- 502
+DQ ++T D +K+W I + +CL TF+ H + SF
Sbjct: 549 FSTVDQ--CVMTASGDKTVKIWAIS-------------DGSCLKTFEGHTSSVLRASFIT 593
Query: 503 DGDNLVSGSQDRTVRQWDLNSGKCTQTID 531
DG VS D ++ W++N+ +C T D
Sbjct: 594 DGTQFVSCGADGLLKLWNVNTSECIATYD 622
Score = 61.6 bits (148), Expect = 4e-09
Identities = 51/215 (23%), Positives = 99/215 (45%), Gaps = 33/215 (15%)
Query: 422 VKVWDLSKKKQIATLHGH----LASISCMQIDQYSTLITGGRDAVLKLWDIDKAMADEAS 477
V+V+D++ L GH L+ +C+ ++TG +D ++LW+
Sbjct: 383 VRVYDVATMSCSYVLAGHKEVVLSLDTCVSSSGNVLIVTGSKDKTVRLWNAT-------- 434
Query: 478 NSSEDNDACLYTFDSHVDEITAISFDGDNL---VSGSQDRTVRQWDLNSGKCTQTIDISF 534
+ +C+ H +I A++F + VSGS DRT++ W L+ I+
Sbjct: 435 -----SKSCIGVGTGHNGDILAVAFAKKSFSFFVSGSGDRTLKVWSLDGISEDSEEPINL 489
Query: 535 ATGPMRSQRNIPLRNSVLLTKEPPAIGALQCFDAALATGTKDGIVRLWDLRSGKVVRMLE 594
T + + + + NSV + + D+ + TG++D +W L V L+
Sbjct: 490 KTRSVVAAHDKDI-NSVAVARN----------DSLVCTGSEDRTASIWRLPDLVHVVTLK 538
Query: 595 GHTDAITSLQFDSVN--LVTGAMDRSIRIWDLRTG 627
GH I S++F +V+ ++T + D++++IW + G
Sbjct: 539 GHKRRIFSVEFSTVDQCVMTASGDKTVKIWAISDG 573
Score = 59.3 bits (142), Expect = 2e-08
Identities = 54/203 (26%), Positives = 86/203 (41%), Gaps = 36/203 (17%)
Query: 387 SKITSLPKAHDEDITCLDFDMPFGTMCSAGSLDHSVKVWDLSKKKQIATLHGHLASISCM 446
S + S + + +T L + SAG ++VWDL K I + GH + M
Sbjct: 50 SSVKSTIEGESDTLTALALSPDDKLLFSAGH-SRQIRVWDLETLKCIRSWKGHEGPVMGM 108
Query: 447 QIDQYSTLI-TGGRDAVLKLWDIDKAMADEASNSSEDNDACLYTFDSHVDEITAISFDGD 505
L+ T G D + +WD+D C + F H +++I F D
Sbjct: 109 ACHASGGLLATAGADRKVLVWDVDGGF-------------CTHYFRGHKGVVSSILFHPD 155
Query: 506 N----LVSGSQDRTVRQWDLNSGKCTQTIDISFATGPMRSQRNIPLRNSVLLTKEPPAIG 561
+ L+SGS D TVR WDLN+ K T+ ++ +++ S+ L+++
Sbjct: 156 SNKNILISGSDDATVRVWDLNA-KNTEKKCLAI------MEKHFSAVTSIALSED----- 203
Query: 562 ALQCFDAALATGTKDGIVRLWDL 584
L F A +D +V LWDL
Sbjct: 204 GLTLFSAG-----RDKVVNLWDL 221
Score = 51.6 bits (122), Expect = 4e-06
Identities = 39/143 (27%), Positives = 61/143 (42%), Gaps = 29/143 (20%)
Query: 489 TFDSHVDEITAISFDGDN--LVSGSQDRTVRQWDLNSGKCTQTIDISFATGPMRSQRNIP 546
T + D +TA++ D+ L S R +R WDL + KC +RS +
Sbjct: 55 TIEGESDTLTALALSPDDKLLFSAGHSRQIRVWDLETLKC------------IRSWKG-- 100
Query: 547 LRNSVLLTKEPPAIG-ALQCFDAALATGTKDGIVRLWDLRSGKVVRMLEGHTDAITSLQF 605
E P +G A LAT D V +WD+ G GH ++S+ F
Sbjct: 101 --------HEGPVMGMACHASGGLLATAGADRKVLVWDVDGGFCTHYFRGHKGVVSSILF 152
Query: 606 DSVN----LVTGAMDRSIRIWDL 624
+ L++G+ D ++R+WDL
Sbjct: 153 HPDSNKNILISGSDDATVRVWDL 175
>At2g46280 [JT] KOG0643 Translation initiation factor 3 subunit i
(eIF-3i)/TGF-beta receptor-interacting protein (TRIP-1)
Length = 328
Score = 63.5 bits (153), Expect = 1e-09
Identities = 51/216 (23%), Positives = 96/216 (43%), Gaps = 42/216 (19%)
Query: 482 DNDACLYTFDSHVDEITA--ISFDGDNLVSGSQDRTVRQWDLNSGK-------CTQTIDI 532
DN L T+ H + +S D L++GS D+T + WD+ SGK T +
Sbjct: 40 DNGERLGTYRGHNGAVWCCDVSRDSSRLITGSADQTAKLWDVKSGKELFTFKFNAPTRSV 99
Query: 533 SFATGP---MRSQRNIPLRNSVLLTK---------EPPAIGALQCFDA------------ 568
FA G + + + R + + K + ++ L C D
Sbjct: 100 DFAVGDRLAVITTDHFVDRTAAIHVKRIAEDPEEQDAESVLVLHCPDGKKRINRAVWGPL 159
Query: 569 --ALATGTKDGIVRLWDLRSGKVVRMLE---GHTDAITSL--QFDSVNLVTGAMDRSIRI 621
+ +G +D ++R+WD +GK+++ + GH ITSL D + +TG++D++ ++
Sbjct: 160 NQTIVSGGEDKVIRIWDAETGKLLKQSDEEVGHKKDITSLCKAADDSHFLTGSLDKTAKL 219
Query: 622 WDLRTGILSDVFAYEQPITSLHFD--LDKIVISNNE 655
WD+RT L + P+ ++ L+ +V+ +
Sbjct: 220 WDMRTLTLLKTYTTVVPVNAVSLSPLLNHVVLGGGQ 255
>At1g79990 [U] KOG0276 Vesicle coat complex COPI beta' subunit
Length = 913
Score = 63.5 bits (153), Expect = 1e-09
Identities = 41/174 (23%), Positives = 79/174 (44%), Gaps = 26/174 (14%)
Query: 383 YDSGSKITSLPKAHDEDITCLDFDMPFGTMCSAGSLDHSVKVWDLSKKKQIATLHGHLAS 442
++ G T + + H + + F+ ++ SLD ++K+W+L TL HL
Sbjct: 121 WEKGWLCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDAHLKG 180
Query: 443 ISCMQIDQYS-----TLITGGRDAVLKLWDIDKAMADEASNSSEDNDACLYTFDSHVDEI 497
++C +D ++ LITG D K+WD +C+ T + H +
Sbjct: 181 VNC--VDYFTGGDKPYLITGSDDHTAKVWDY-------------QTKSCVQTLEGHTHNV 225
Query: 498 TAISFDGD--NLVSGSQDRTVRQWDLNSGKCTQTIDIS----FATGPMRSQRNI 545
+A+SF + +++GS+D TVR W + + T++ +A G ++ R +
Sbjct: 226 SAVSFHPELPIIITGSEDGTVRIWHATTYRLENTLNYGLERVWAIGHIKGSRRV 279
>At1g27840 [KL] KOG4283 Transcription-coupled repair protein CSA contains WD40
domain
Length = 254
Score = 63.5 bits (153), Expect = 1e-09
Identities = 54/212 (25%), Positives = 95/212 (44%), Gaps = 35/212 (16%)
Query: 427 LSKKKQIATLHGHLASISCMQID--QYSTLITGGRDAVLKLWDIDKAMADEASNSSEDND 484
LS +K + H S++ +Q+D + L++G D ++D+ +A EAS +
Sbjct: 32 LSNRKDFVS--PHRGSVNSLQVDLTEGRYLLSGAADGSAAVFDVQRATDYEASGLIAKHK 89
Query: 485 ACLYTFDSHVDE------ITAISFDGDN--LVSGSQDRTVRQWDLNSGKCTQTIDISFAT 536
C++T D + +AI + D ++GS D ++ WD N+ + +D
Sbjct: 90 -CIFTVDKQHENGHKYAISSAIWYPIDTGLFITGSFDHYLKVWDTNTAQAV--VDFKMPG 146
Query: 537 GPMRSQRNIPLRNSVLLTKEPPAIGALQCFDAALATGTKDGIVRLWDLRSGKVVRMLEGH 596
R+ A+ ++ +A GT+D VRL D+ SG L GH
Sbjct: 147 KVYRT-----------------AMSSMAMSHTLIAAGTEDVQVRLCDIASGAFSHTLSGH 189
Query: 597 TDAITSLQFDSVN---LVTGAMDRSIRIWDLR 625
D + S+++ + + L TG D +IR WD+R
Sbjct: 190 RDGVMSVEWSTSSEWVLYTGGCDGAIRFWDIR 221
>7299285 [R] KOG4155 FOG: WD40 repeat
Length = 331
Score = 63.5 bits (153), Expect = 1e-09
Identities = 70/270 (25%), Positives = 116/270 (42%), Gaps = 51/270 (18%)
Query: 454 LITGGRDAVLKLWDIDKAMADEASNSSEDNDACL-YTFDSHVDEIT--AISFDGDNLVSG 510
L+TGG D ++K+WD+ EDN L + H + A+S DG + S
Sbjct: 55 LVTGGLDDLVKVWDLQ-----------EDNTLKLRHKLKGHALGVVSVAVSSDGQTIASS 103
Query: 511 SQDRTVRQWDLNSGKCTQTIDISFATGPMRSQRNIPLRNSVLLTKEPPAIG--------A 562
S D T+ WD SG +SF + + + P V+ I A
Sbjct: 104 SLDSTMCLWDARSGDKKHL--LSFGPVDLWTVQFSPCNKYVISGLNDGKISMYSVETGKA 161
Query: 563 LQCFDAA----------------LATGTKDGIVRLWDLRSGKVVRMLEGHTDAITSLQF- 605
Q DA +A+G DGI+ ++D+ +GKVV+ LEGH + SL F
Sbjct: 162 EQTLDAQNGKYTLSIAYSPDGKYIASGAIDGIITIFDVAAGKVVQTLEGHAMPVRSLCFS 221
Query: 606 -DSVNLVTGAMDRSIRIWDL-RTGILSDVFAYEQPITSLHFDLD--KIVISNNEPTVKIY 661
+S L+T + D ++++D+ + ++ + + + + F D S+++ +VKI+
Sbjct: 222 PNSQLLLTASDDGHMKLYDVTHSDVVGTLSGHASWVLCVAFSEDGKHFASSSSDNSVKIW 281
Query: 662 NRKDGN--HWFCGEDDPEQGNVDFVRYKHG 689
+ + H F D G VRY G
Sbjct: 282 DTSERKCLHTFAEHTDQVWG----VRYSPG 307
Score = 51.2 bits (121), Expect = 5e-06
Identities = 31/125 (24%), Positives = 56/125 (44%), Gaps = 16/125 (12%)
Query: 408 PFGTMCSAGSLDHSVKVWDLSKKKQIATLHGHLASISCMQIDQYSTLI-TGGRDAVLKLW 466
P G ++G++D + ++D++ K + TL GH + + S L+ T D +KL+
Sbjct: 180 PDGKYIASGAIDGIITIFDVAAGKVVQTLEGHAMPVRSLCFSPNSQLLLTASDDGHMKLY 239
Query: 467 DIDKAMADEASNSSEDNDACLYTFDSHVDEITAISF--DGDNLVSGSQDRTVRQWDLNSG 524
D+ + + T H + ++F DG + S S D +V+ WD +
Sbjct: 240 DVT-------------HSDVVGTLSGHASWVLCVAFSEDGKHFASSSSDNSVKIWDTSER 286
Query: 525 KCTQT 529
KC T
Sbjct: 287 KCLHT 291
>At2g21390 [U] KOG0292 Vesicle coat complex COPI alpha subunit
Length = 1218
Score = 62.8 bits (151), Expect = 2e-09
Identities = 63/232 (27%), Positives = 102/232 (43%), Gaps = 34/232 (14%)
Query: 415 AGSLDHSVKVWDLSKKKQIATLHGHLASISCMQIDQYST-LITGGRDAVLKLWDIDKAMA 473
+G D+ +KVW+ + + TL GHL I +Q + +++ D +++W
Sbjct: 68 SGGDDYKIKVWNYKTHRCLFTLLGHLDYIRTVQFHHENPWIVSASDDQTIRIW------- 120
Query: 474 DEASNSSEDNDACLYTFDSHVDEITAISF--DGDNLVSGSQDRTVRQWDLNSGKCTQTID 531
+ + C+ H + SF D +VS S D+TVR WD+ + K
Sbjct: 121 ------NWQSRTCISVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDIGALKKKSA-- 172
Query: 532 ISFATGPMR-SQRNIPLRNSVLLTKEPPAIGALQCFDAA--------LATGTKDGIVRLW 582
S A MR SQ N L V + G + + A + +G D V+LW
Sbjct: 173 -SPADDLMRFSQMNSDLFGGVDAIVKYVLEGHDRGVNWASFHPTLPLIVSGADDRQVKLW 231
Query: 583 DLRSGKV--VRMLEGHTDAITSLQFDSVN--LVTGAMDRSIRIWDL--RTGI 628
+ K V L GH + ++S+ F + +V+ + D+SIR+WD RTGI
Sbjct: 232 RMNETKAWEVDTLRGHMNNVSSVMFHAKQDIIVSNSEDKSIRVWDATKRTGI 283
>SPCC1672.07 [R] KOG1539 WD repeat protein
Length = 902
Score = 62.4 bits (150), Expect = 2e-09
Identities = 45/152 (29%), Positives = 69/152 (44%), Gaps = 26/152 (17%)
Query: 497 ITAISFDGDN--LVSGSQDRTVRQWDLNSGKCTQTIDISFATGPMRSQRNIPLRNSVLLT 554
+TA+ D N LV+ S D ++ WD N G ++D+ + Q + L
Sbjct: 492 VTAVMLDNVNRILVTASLDGILKFWDFNKGNLIDSLDVGSSITHAIYQHSSDL------- 544
Query: 555 KEPPAIGALQCFDAALATGTKDGIVRLWDLRSGKVVRMLEGHTDAITSLQFDSVN--LVT 612
+A D +R+ D+++ K+VR L GH++ +TS F LVT
Sbjct: 545 ---------------VAVACDDFGIRIVDVQTRKIVRELWGHSNRLTSFDFSDTGRWLVT 589
Query: 613 GAMDRSIRIWDLRTGILSDVFAYEQPITSLHF 644
++D +IR WDL TG L D + TSL F
Sbjct: 590 ASLDGTIRTWDLPTGHLIDSISTPSVCTSLTF 621
>SPBPJ4664.04 [U] KOG0292 Vesicle coat complex COPI alpha subunit
Length = 1207
Score = 62.4 bits (150), Expect = 2e-09
Identities = 53/246 (21%), Positives = 102/246 (40%), Gaps = 29/246 (11%)
Query: 396 HDEDITCLDFDMPFGTMCSAGSLDHSVKVWDLSKKKQIATLHGHLASIS-CMQIDQYSTL 454
HD + + F P + +G D+ V VW+ +K + +L GH+ + C +Y +
Sbjct: 52 HDGPVRGIAFH-PTQPLFVSGGDDYKVNVWNYKSRKLLFSLCGHMDYVRVCTFHHEYPWI 110
Query: 455 ITGGRDAVLKLWDIDKAMADEASNSSEDNDACLYTFDSHVDEITAISFDGDNLVSGSQDR 514
++ D +++W N N + T SH A D +VS S D+
Sbjct: 111 LSCSDDQTIRIW-----------NWQSRNCIAILTGHSHYVMCAAFHPSEDLIVSASLDQ 159
Query: 515 TVRQWDLNSGKCTQTIDISFATGPMRSQRNIPLRNSVLLTKEPPAIGALQCFDAA----- 569
TVR WD++ + +S + +Q + + N + + + L+ D
Sbjct: 160 TVRVWDISGLRMKNAAPVSMSLEDQLAQAHNSISNDLFGSTDAIVKFVLEGHDRGVNWCA 219
Query: 570 -------LATGTKDGIVRLWDLRSGKV--VRMLEGHTDAITSLQFDSVN--LVTGAMDRS 618
+ + D +V+LW + + K V GH + ++ F +++ + D++
Sbjct: 220 FHPTLPLILSAGDDRLVKLWRMTASKAWEVDTCRGHFNNVSCCLFHPHQELILSASEDKT 279
Query: 619 IRIWDL 624
IR+WDL
Sbjct: 280 IRVWDL 285
>Hs13376840 [R] KOG4155 FOG: WD40 repeat
Length = 305
Score = 62.4 bits (150), Expect = 2e-09
Identities = 54/259 (20%), Positives = 118/259 (44%), Gaps = 42/259 (16%)
Query: 412 MCSAGSLDHSVKVWDLSKKKQIATLH-GHLASISCMQIDQYSTLITGGRDAVLKLWDIDK 470
+ ++ SLD +++WDL KQI ++ G + + + L TG + ++ ++
Sbjct: 78 IAASSSLDAHIRLWDLENGKQIKSIDAGPVDAWTLAFSPDSQYLATGTHVGKVNIFGVES 137
Query: 471 AMADEASNSSEDNDACLYTFDSHVDEITAISF--DGDNLVSGSQDRTVRQWDLNSGKCTQ 528
+ Y+ D+ I +I++ DG L SG+ D + +D+ +GK
Sbjct: 138 GKKE-------------YSLDTRGKFILSIAYSPDGKYLASGAIDGIINIFDIATGKLLH 184
Query: 529 TIDISFATGPMRSQRNIPLRNSVLLTKEPPAIGALQCFDAALATGTKDGIVRLWDLRSGK 588
T++ +P+R+ LT P + L T + DG ++++D++
Sbjct: 185 TLE----------GHAMPIRS---LTFSPDS--------QLLVTASDDGYIKIYDVQHAN 223
Query: 589 VVRMLEGHTDAITSLQF--DSVNLVTGAMDRSIRIWDLRT-GILSDVFAYEQPITSLHFD 645
+ L GH + ++ F D + V+ + D+S+++WD+ T + F ++ + + ++
Sbjct: 224 LAGTLSGHASWVLNVAFCPDDTHFVSSSSDKSVKVWDVGTRTCVHTFFDHQDQVWGVKYN 283
Query: 646 LD--KIVISNNEPTVKIYN 662
+ KIV ++ + IY+
Sbjct: 284 GNGSKIVSVGDDQEIHIYD 302
Score = 60.5 bits (145), Expect = 9e-09
Identities = 64/221 (28%), Positives = 101/221 (44%), Gaps = 37/221 (16%)
Query: 453 TLITGGRDAVLKLWDIDKAMADEASNSSEDNDACLYTFD-SHVDEITAISFDGDNLVSGS 511
T++TG D ++K+W D S E + + + D SH I A S S
Sbjct: 34 TVVTGSLDDLVKVWKWRDERLD-LQWSLEGHQLGVVSVDISHTLPIAA---------SSS 83
Query: 512 QDRTVRQWDLNSGKCTQTIDISFATGPMRSQRNIPLRNSVLLTKEPPAIGALQCFDAALA 571
D +R WDL +GK ++ID GP+ ++ L P + LA
Sbjct: 84 LDAHIRLWDLENGKQIKSID----AGPV---------DAWTLAFSPDS--------QYLA 122
Query: 572 TGTKDGIVRLWDLRSGKVVRMLEGHTDAITSLQF--DSVNLVTGAMDRSIRIWDLRTG-I 628
TGT G V ++ + SGK L+ I S+ + D L +GA+D I I+D+ TG +
Sbjct: 123 TGTHVGKVNIFGVESGKKEYSLDTRGKFILSIAYSPDGKYLASGAIDGIINIFDIATGKL 182
Query: 629 LSDVFAYEQPITSLHFDLDK--IVISNNEPTVKIYNRKDGN 667
L + + PI SL F D +V ++++ +KIY+ + N
Sbjct: 183 LHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHAN 223
>CE02186 [R] KOG0286 G-protein beta subunit
Length = 340
Score = 62.4 bits (150), Expect = 2e-09
Identities = 62/260 (23%), Positives = 103/260 (38%), Gaps = 54/260 (20%)
Query: 387 SKITSLPKAHDEDITCLDFDMPFGTMCSAGSLDHSVKVWDLSKK----KQIATLHGHLAS 442
+K+ ++P +TC P G+ + G LD+ ++ L + + L GH
Sbjct: 88 NKVHAIPLRSSWVMTCAY--APSGSFVACGGLDNICSIYSLKTREGNVRVSRELPGHTGY 145
Query: 443 ISCMQIDQYSTLITGGRDAVLKLWDIDKAMADEASNSSEDNDACLYTFDSHVDEITAISF 502
+SC + + ++T D LWDI+ A F H ++ ++S
Sbjct: 146 LSCCRFLDDNQIVTSSGDMTCALWDIETGQQCTA-------------FTGHTGDVMSLSL 192
Query: 503 DGD--NLVSGSQDRTVRQWDLNSGKCTQTIDISFATGPMRSQRNIPLRNSVLLTKEPPAI 560
D +SG+ D + + WD+ G C QT P S I
Sbjct: 193 SPDFRTFISGACDASAKLWDIRDGMCKQT---------------FPGHES--------DI 229
Query: 561 GALQCFDA--ALATGTKDGIVRLWDLRSGKVVRML--EGHTDAITSLQFDSVN--LVTGA 614
A+ F + A ATG+ D RL+D+R+ + + M + ITS+ F L G
Sbjct: 230 NAVAFFPSGNAFATGSDDATCRLFDIRADQELAMYSHDNIICGITSVAFSKSGRLLFAGY 289
Query: 615 MDRSIRIWDL----RTGILS 630
D + +WD R G+L+
Sbjct: 290 DDFNCNVWDSMRQERAGVLA 309
Score = 61.6 bits (148), Expect = 4e-09
Identities = 62/234 (26%), Positives = 96/234 (40%), Gaps = 41/234 (17%)
Query: 396 HDEDITCLDFDMPFGTMCSAGSLDHSVKVWDLSKKKQIATLHGHLASISCMQID-QYSTL 454
H ++C F + S+G D + +WD+ +Q GH + + + + T
Sbjct: 142 HTGYLSCCRFLDDNQIVTSSG--DMTCALWDIETGQQCTAFTGHTGDVMSLSLSPDFRTF 199
Query: 455 ITGGRDAVLKLWDIDKAMADEASNSSEDNDACLYTFDSHVDEITAISF--DGDNLVSGSQ 512
I+G DA KLWDI M C TF H +I A++F G+ +GS
Sbjct: 200 ISGACDASAKLWDIRDGM-------------CKQTFPGHESDINAVAFFPSGNAFATGSD 246
Query: 513 DRTVRQWDLNSGKCTQTIDISFATGPMRSQRNIPLR-NSVLLTKEPPAIGALQCFDAALA 571
D T R +D+ + D A M S NI SV +K G L L
Sbjct: 247 DATCRLFDIRA-------DQELA---MYSHDNIICGITSVAFSKS----GRL------LF 286
Query: 572 TGTKDGIVRLWDLRSGKVVRMLEGHTDAITSLQF--DSVNLVTGAMDRSIRIWD 623
G D +WD + +L GH + ++ L D + + TG+ D ++IW+
Sbjct: 287 AGYDDFNCNVWDSMRQERAGVLAGHDNRVSCLGVTEDGMAVCTGSWDSFLKIWN 340
>7297332 [D] KOG0642 Cell-cycle nuclear protein contains WD-40 repeats
Length = 734
Score = 62.4 bits (150), Expect = 2e-09
Identities = 76/338 (22%), Positives = 126/338 (36%), Gaps = 72/338 (21%)
Query: 339 QLQDHEKKSDISERKKHSTSKKIKDVGVSHRNRRRKTYPTLQQFYDSGSKITSLPKAHDE 398
++ D ++ SD E +T DV ++ R + K T + G + ++E
Sbjct: 326 EMSDDDEISDDLEMV--ATDNDDTDVKLAKRAKSGKDMLTEEVDGSLGLGELAQLTVNNE 383
Query: 399 DITCLDFDMPFGTMCSAGSLDHSVKVWDLSKKKQIATLHGHLASI-SCMQIDQYSTLITG 457
D + GT SAG + K W+ TL H + S + + LIT
Sbjct: 384 SDGAYDANSKDGTGGSAGGAGYR-KTWNAKY-----TLRSHFDGVRSLIFHPEEPVLITA 437
Query: 458 GRDAVLKLWDIDKAMADEASNSSEDNDACLYTFDSHVDEITAI--SFDGDNLVSGSQDRT 515
D LKLW++ K + +A S+ + LYTF +H + + S G+ SG D
Sbjct: 438 SEDHTLKLWNLQKTV--QAKKSASLDVEPLYTFRAHTGPVLCLGMSSSGETCYSGGLDGN 495
Query: 516 VRQWDLNSGKCTQTIDISFATGPMRSQRNIPLRNSVLLTKEPPAIGALQCFDAALATGTK 575
+ W L S P I C+D + +GT
Sbjct: 496 IECWQLPS----------------------------------PNIDPYDCYDPNVHSGT- 520
Query: 576 DGIVRLWDLRSGKVVRMLEGHTDAITSLQFDSVNLVTGAMDRSIRIWD-------LRTGI 628
LEGHTDA+ L N+V+ + D ++++W LRT
Sbjct: 521 -----------------LEGHTDAVWGLTTMQSNIVSCSADGTVKLWSPYNKEPLLRTYT 563
Query: 629 LSDVFAYEQPITSLHFDLDKIVISNNEPTVKIYNRKDG 666
S+ + + ++D IV++ N +Y+ + G
Sbjct: 564 ASEAEGVPSSVDFVRNEVDHIVVAYNSAHCIVYDTETG 601
>Hs7662364 [R] KOG0641 WD40 repeat protein
Length = 919
Score = 62.0 bits (149), Expect = 3e-09
Identities = 66/271 (24%), Positives = 111/271 (40%), Gaps = 50/271 (18%)
Query: 394 KAHDEDITCLDFDMPFGTMCSAGSLDHSVKVWDLSKKKQIAT-------LH-GHLASISC 445
K H I C+ + P G + + GS D VKV + + AT +H G + ++
Sbjct: 658 KHHKGSIYCVAWS-PCGQLLATGSNDKYVKVLPFNAETCNATGPDLEFSMHDGTIRDLAF 716
Query: 446 MQIDQYSTLI---TGGRDAVLKLWDIDKAMADEASNSSEDNDACLYTFDSHVDEITAI-S 501
M+ + I G D + D + L+ H I A+ +
Sbjct: 717 MEGPESGGAILISAGAGDCNIYTTDCQRGQG-------------LHALSGHTGHILALYT 763
Query: 502 FDGDNLVSGSQDRTVRQWDLNSGKCTQTIDISFATGPMRSQRNIPLRNSVLLTKEPPAIG 561
+ G + SGSQD+TVR WDL C + + +F T A
Sbjct: 764 WSGWMIASGSQDKTVRFWDLRVPSCVRVVGTTFHG-----------------TGSAVASV 806
Query: 562 ALQCFDAALATGTKDGIVRLWDLRSGKVVRMLEGHTDAITSLQFD--SVNLVTGAMDRSI 619
A+ LATG +D L+D+R G++V+ H+ + S++F + L+TG+ D I
Sbjct: 807 AVDPSGRLLATGQEDSSCMLYDIRGGRMVQSYHPHSSDVRSVRFSPGAHYLLTGSYDMKI 866
Query: 620 RIWDLRTGILSDVFAYEQPITSLHFDLDKIV 650
++ DL+ + + PI + DK++
Sbjct: 867 KVTDLQGDLTKQL-----PIMVVGEHKDKVI 892
>Hs20357529 [R] KOG0286 G-protein beta subunit
Length = 340
Score = 62.0 bits (149), Expect = 3e-09
Identities = 67/291 (23%), Positives = 113/291 (38%), Gaps = 53/291 (18%)
Query: 387 SKITSLPKAHDEDITCLDFDMPFGTMCSAGSLDHSVKVWDLSKK----KQIATLHGHLAS 442
+K+ ++P +TC P G + G LD+ ++ L + + L GH
Sbjct: 88 NKVHAIPLRSSWVMTCAY--APSGNFVACGGLDNICSIYSLKTREGNVRVSRELPGHTGY 145
Query: 443 ISCMQIDQYSTLITGGRDAVLKLWDIDKAMADEASNSSEDNDACLYTFDSHVDEITAISF 502
+SC + + +IT D LWDI+ F H ++ ++S
Sbjct: 146 LSCCRFLDDNQIITSSGDTTCALWDIETGQQTVG-------------FAGHSGDVMSLSL 192
Query: 503 --DGDNLVSGSQDRTVRQWDLNSGKCTQTIDISFATGPMRSQRNIPLRNSVLLTKEPPAI 560
DG VSG+ D +++ WD+ C QT I
Sbjct: 193 APDGRTFVSGACDASIKLWDVRDSMCRQT-----------------------FIGHESDI 229
Query: 561 GALQCF--DAALATGTKDGIVRLWDLRSGKVVRML--EGHTDAITSLQFDSVN--LVTGA 614
A+ F A TG+ D RL+DLR+ + + M + ITS+ F L+ G
Sbjct: 230 NAVAFFPNGYAFTTGSDDATCRLFDLRADQELLMYSHDNIICGITSVAFSRSGRLLLAGY 289
Query: 615 MDRSIRIWDLRTGILSDVFA-YEQPITSLHFDLDKIVISNN--EPTVKIYN 662
D + IWD G + V A ++ ++ L D + ++ + +KI+N
Sbjct: 290 DDFNCNIWDAMKGDRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLKIWN 340
>At3g15980 [U] KOG0276 Vesicle coat complex COPI beta' subunit
Length = 921
Score = 62.0 bits (149), Expect = 3e-09
Identities = 41/174 (23%), Positives = 79/174 (44%), Gaps = 26/174 (14%)
Query: 383 YDSGSKITSLPKAHDEDITCLDFDMPFGTMCSAGSLDHSVKVWDLSKKKQIATLHGHLAS 442
+++G T + + H + + F+ ++ SLD ++K+W+L TL H
Sbjct: 131 WENGWACTQIFEGHSHYVMQVVFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDAHQKG 190
Query: 443 ISCMQIDQYS-----TLITGGRDAVLKLWDIDKAMADEASNSSEDNDACLYTFDSHVDEI 497
++C +D ++ LITG D K+WD +C+ T D H +
Sbjct: 191 VNC--VDYFTGGDKPYLITGSDDHTAKVWDY-------------QTKSCVQTLDGHTHNV 235
Query: 498 TAISFDGD--NLVSGSQDRTVRQWDLNSGKCTQTIDIS----FATGPMRSQRNI 545
+A+ F + +++GS+D TVR W + + T++ +A G ++S R +
Sbjct: 236 SAVCFHPELPIIITGSEDGTVRIWHATTYRLENTLNYGLERVWAIGYIKSSRRV 289
Score = 51.2 bits (121), Expect = 5e-06
Identities = 46/196 (23%), Positives = 76/196 (38%), Gaps = 42/196 (21%)
Query: 394 KAHDEDITCLDFDMPFGTMCSAGSLDHSVKVWDLSKK---KQIATLHGHLASISCMQIDQ 450
+AH + I C+ + S+ D +K+WD QI H H
Sbjct: 99 EAHSDYIRCVAVHPTLPYVLSSSD-DMLIKLWDWENGWACTQIFEGHSHYVMQVVFNPKD 157
Query: 451 YSTLITGGRDAVLKLWDIDKAMADEASNSSEDNDACLYTFDSHVDEITAISF----DGDN 506
+T + D +K+W++ S + N +T D+H + + + D
Sbjct: 158 TNTFASASLDRTIKIWNL---------GSPDPN----FTLDAHQKGVNCVDYFTGGDKPY 204
Query: 507 LVSGSQDRTVRQWDLNSGKCTQTIDISFATGPMRSQRNIPLRNSVLLTKEPPAIGALQCF 566
L++GS D T + WD + C QT+D N+ ++V E P I
Sbjct: 205 LITGSDDHTAKVWDYQTKSCVQTLD--------GHTHNV---SAVCFHPELPII------ 247
Query: 567 DAALATGTKDGIVRLW 582
TG++DG VR+W
Sbjct: 248 ----ITGSEDGTVRIW 259
>7300806 [S] KOG0282 mRNA splicing factor
Length = 576
Score = 62.0 bits (149), Expect = 3e-09
Identities = 53/200 (26%), Positives = 85/200 (42%), Gaps = 37/200 (18%)
Query: 430 KKQIATLHGHLASISCMQIDQYST--LITGGRDAVLKLWDIDKAMADEASNSSEDNDACL 487
K I T GH IS ++ + L++G D +KLW++ C+
Sbjct: 275 KAHIHTWSGHNKGISSIRWFPKTAHLLLSGSMDCRVKLWEV------------YGERRCI 322
Query: 488 YTFDSHVDEITAISFD--GDNLVSGSQDRTVRQWDLNSGKCTQTIDISFATGPMRSQRNI 545
TF H I I+++ G N +S S DR ++ WD +G + R +
Sbjct: 323 RTFSGHRQAIKDIAWNNRGTNFLSASYDRYIKLWDAETGDVVSRF----------TTRKM 372
Query: 546 PLRNSVLLTKEPPAIGALQCFDAALATGTKDGIVRLWDLRSGKVVRMLEGHTDAITSLQF 605
P K P F A GT D + WD RSG +V+ + H +++++ F
Sbjct: 373 PF-----CVKFHPDNSKQHLFVA----GTSDKKIICWDTRSGDIVQEYDRHLGSVSTITF 423
Query: 606 --DSVNLVTGAMDRSIRIWD 623
D+ VT + D+S+RIW+
Sbjct: 424 VDDNRRFVTTSDDKSMRIWE 443
>7298279 [S] KOG0316 Conserved WD40 repeat-containing protein
Length = 277
Score = 61.6 bits (148), Expect = 4e-09
Identities = 54/218 (24%), Positives = 86/218 (38%), Gaps = 39/218 (17%)
Query: 415 AGSLDHSVKVWDLSKKKQIATLHGHLASISCMQIDQYSTL-ITGGRDAVLKLWDIDKAMA 473
+ SLD S+ WD+S + L H + C+ ++ S++ I+GGRD + WDI
Sbjct: 76 SASLDKSIIYWDVSTGAPVRRLRSHAGGVRCVCFNEDSSIAISGGRDNAVMCWDIRTRRL 135
Query: 474 DEASNSSEDNDACLYTFDSHVDEITAISFDGDNLVSGSQDRTVRQWDLNSGKCTQTIDIS 533
D E D C+ T ++ + I A S DG VR +D+ G+ T
Sbjct: 136 DPVQVMKEARD-CITTVATNENRIYAASLDG----------CVRTYDIRVGELTCD---- 180
Query: 534 FATGPMRSQRNIPLRNSVLLTKEPPAIGALQCFDAALATGTKDGIVRLWDLRSGKVVRML 593
EP A + L G +D +VRL D +G ++
Sbjct: 181 -------------------KIGEPITYLAQTRDEQCLVAGCQDSVVRLLDCETGGLLSEY 221
Query: 594 EGHTDAITSLQ----FDSVNLVTGAMDRSIRIWDLRTG 627
GH ++ + +VTG+ D ++DL G
Sbjct: 222 RGHRGDDYHIECGILSNDAQIVTGSSDGDAFVYDLLDG 259
>Hs4826956 [A] KOG0291 WD40-repeat-containing subunit of the 18S rRNA
processing complex
Length = 919
Score = 61.2 bits (147), Expect = 5e-09
Identities = 50/208 (24%), Positives = 94/208 (45%), Gaps = 41/208 (19%)
Query: 424 VWDLSKKKQIATLHGHLASISCMQID---QYSTLITGGRDAVLKLWDIDKAMADEASNSS 480
VW+ + + GH S+ + QY ++TGG D +K+W+
Sbjct: 357 VWEWQSESYVLKQQGHFNSMVALAYSPDGQY--IVTGGDDGKVKVWNTLSGF-------- 406
Query: 481 EDNDACLYTFDSHVDEITAISF--DGDNLVSGSQDRTVRQWDLNSGKCTQTIDISFATGP 538
C TF H +T ++F G +V+ S D TVR +DL+ + +T T P
Sbjct: 407 -----CFVTFTEHSSGVTGVTFTATGYVVVTSSMDGTVRAFDLHRYRNFRTF-----TSP 456
Query: 539 MRSQRNIPLRNSVLLTKEPPAIGALQCFDAALATGTKDGIVRLWDLRSGKVVRMLEGHTD 598
+Q + +V + E + GA F+ + +W +++G+++ +L GH
Sbjct: 457 RPTQFSCV---AVDASGEIVSAGAQDSFE-----------IFVWSMQTGRLLDVLSGHEG 502
Query: 599 AITSLQFDSVN--LVTGAMDRSIRIWDL 624
I+ L F+ + L + + D+++R+WD+
Sbjct: 503 PISGLCFNPMKSVLASASWDKTVRLWDM 530
>CE21113 [A] KOG0284 Polyadenylation factor I complex subunit PFS2
Length = 809
Score = 61.2 bits (147), Expect = 5e-09
Identities = 66/264 (25%), Positives = 109/264 (41%), Gaps = 48/264 (18%)
Query: 397 DEDITCLDFDMPFGTMCSAGSLDHSVKVWDLSKKKQIATLHGHLASISCMQIDQYST--- 453
DE I L F P + S D + +VWD ++ + L GH A + C ID + T
Sbjct: 217 DEAIRGLAF-APTDVKFATASDDGTARVWDFARYTEERVLRGHGAEVRC--IDWHPTKGL 273
Query: 454 LITGGRDA--VLKLWDIDKAMADEASNSSEDNDACLYTFDSHVDEITAISF--DGDNLVS 509
+ TG RD +K+WD + +CL T H + A+ F +G+ L++
Sbjct: 274 IATGSRDTQQPVKIWD-------------PKSGSCLATLQEHKSSVMAVEFNKNGNWLLT 320
Query: 510 GSQDRTVRQWDLNSGKCTQTIDISFATGPMRSQRNIPLRNSVLLTKEPPAIGALQCFDAA 569
G +D V+ +D+ K MR+ R KE ++ +
Sbjct: 321 GGRDHLVKMYDIRMMK------------EMRTYR--------AHKKEVISLAWHPIHEGL 360
Query: 570 LATGTKDGIVRLWDLRSGKVVRMLE-GHTDAITSLQFDSVN--LVTGAMDRSIRIWDL-R 625
+G DG + W + K + +LE H AI S+++ + L TG+ D + + W R
Sbjct: 361 FVSGGGDGSIVYWMVDGEKEIGLLEHAHDQAIWSMKWHPLGHILATGSNDNNTKFWARNR 420
Query: 626 TG-ILSDVFAYEQPITSLHFDLDK 648
G + D+F H D ++
Sbjct: 421 PGDTVEDIFGLSNTNMIGHLDKER 444
>At1g19750 [KL] KOG4283 Transcription-coupled repair protein CSA contains WD40
domain
Length = 254
Score = 61.2 bits (147), Expect = 5e-09
Identities = 54/212 (25%), Positives = 94/212 (43%), Gaps = 35/212 (16%)
Query: 427 LSKKKQIATLHGHLASISCMQID--QYSTLITGGRDAVLKLWDIDKAMADEASNSSEDND 484
LS +K + H S++ +Q+D + L++G D ++D+ +A EAS +
Sbjct: 32 LSNRKDFVS--PHRGSVNSLQVDLTEGRYLLSGAADGSAAVFDVKRATDYEASGLIAKHK 89
Query: 485 ACLYTF-----DSHVDEITAISF---DGDNLVSGSQDRTVRQWDLNSGKCTQTIDISFAT 536
C++T + H I++ + D ++GS D V+ WD N+ + +D
Sbjct: 90 -CIFTVRKQHENGHKYAISSAIWYPIDTGMFITGSFDHYVKVWDTNTSQVV--VDFKMPG 146
Query: 537 GPMRSQRNIPLRNSVLLTKEPPAIGALQCFDAALATGTKDGIVRLWDLRSGKVVRMLEGH 596
R+ A+ ++ +A GT D VRL D+ SG L GH
Sbjct: 147 KVYRT-----------------AMSSMAMSHTLIAAGTDDVQVRLCDIASGAFSHTLSGH 189
Query: 597 TDAITSLQFDSVN---LVTGAMDRSIRIWDLR 625
D + S+++ + + L TG D +IR WD+R
Sbjct: 190 RDGVMSVEWSTSSEWVLYTGGCDGAIRFWDIR 221
>7298053 [U] KOG0276 Vesicle coat complex COPI beta' subunit
Length = 860
Score = 61.2 bits (147), Expect = 5e-09
Identities = 47/183 (25%), Positives = 80/183 (43%), Gaps = 31/183 (16%)
Query: 394 KAHDEDITCLDFDMPFGTMCSAGSLDHSVKVWDLSKKKQIATLHGHLASISCMQIDQY-- 451
+ H + + F+ ++ SLD +VKVW L TL GH ++C +D Y
Sbjct: 110 EGHTHYVMQIVFNPKDNNTFASASLDRTVKVWQLGSNFANFTLEGHEKGVNC--VDYYHG 167
Query: 452 ---STLITGGRDAVLKLWDIDKAMADEASNSSEDNDACLYTFDSHVDEITAISFDGD--N 506
LI+G D ++K+WD N C+ T + H I+A+ F +
Sbjct: 168 GDKPYLISGADDRLVKIWDY-------------QNKTCVQTLEGHAQNISAVCFHPELPI 214
Query: 507 LVSGSQDRTVRQWDLNSGKCTQTIDISF----ATGPMRSQRNIPL---RNSVLLT--KEP 557
+++GS+D TVR W + + ++ F MR N+ L S+++ +E
Sbjct: 215 VLTGSEDGTVRIWHSGTYRLETCLNYGFERVWTISSMRGTNNVALGYDEGSIIIKVGREE 274
Query: 558 PAI 560
PA+
Sbjct: 275 PAM 277
>Hs4827030 [B] KOG0639 Transducin-like enhancer of split protein (contains
WD40 repeats)
Length = 772
Score = 60.8 bits (146), Expect = 7e-09
Identities = 56/206 (27%), Positives = 87/206 (42%), Gaps = 42/206 (20%)
Query: 431 KQIATLHGHLASISCMQIDQYSTLITGGRDAVLKLWDIDKAMADEASNSSEDNDACLYTF 490
+QI TL H + + I S + G +K+WDI + S S CL
Sbjct: 478 RQINTL-SHGGVVCAVTISNPSRHVYTGGKGCVKIWDISQP----GSKSPISQLDCLNR- 531
Query: 491 DSHVDEITAISFDGDNLVSGSQDRTVRQWDLNSGKCTQTIDISFATGPMRSQRNIPLRNS 550
D+++ + DG L+ G + T+ WDL S T ++++
Sbjct: 532 DNYMRSCK-LHPDGRTLIVGGEGSTLTIWDLAS-----------PTPRIKAE-------- 571
Query: 551 VLLTKEPPAIGALQCFDAALATGTK-------DGIVRLWDLRSGKVVRMLEGHTDAIT-- 601
LT PA C+ A++ K DG + +WDL + +VR +GHTD +
Sbjct: 572 --LTSSAPA-----CYALAISPDAKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCI 624
Query: 602 SLQFDSVNLVTGAMDRSIRIWDLRTG 627
+ D L TG +D ++R WDLR G
Sbjct: 625 DISHDGTKLWTGGLDNTVRSWDLREG 650
>Hs20127645 [R] KOG0266 WD40 repeat-containing protein
Length = 548
Score = 60.8 bits (146), Expect = 7e-09
Identities = 57/241 (23%), Positives = 103/241 (42%), Gaps = 37/241 (15%)
Query: 416 GSLDHSVKVWDLSKKKQIATLHGHLASISCMQIDQYST--LITGGRDAVLKLWDIDKAMA 473
G+ D + V+D + ++ + H ++ + S+ L +GG DA+ K+WD
Sbjct: 283 GANDGCLYVFDREQNRRTLQIESHEDDVNAVAFADISSQILFSGGDDAICKVWD------ 336
Query: 474 DEASNSSEDNDACLYTFDSHVDEITAISFDGDN--LVSGSQDRTVRQWDL---------- 521
ED+ + H D IT I GD L+S S+D+T++ WD+
Sbjct: 337 --RRTMREDDPKPVGALAGHQDGITFIDSKGDARYLISNSKDQTIKLWDIRRFSSREGME 394
Query: 522 --NSGKCTQTIDISFATGPMRSQRNIPL-RNSVLLTKEPPAI--GALQC-FDAALATGTK 575
Q D + P ++ R + L +S L+T + ++C F +TG +
Sbjct: 395 ASRQAATQQNWDYRWQQVPKKAWRKLKLPGDSSLMTYRGHGVLHTLIRCRFSPIHSTGQQ 454
Query: 576 -------DGIVRLWDLRSGKVVRMLEGHTDAITSLQFD--SVNLVTGAMDRSIRIWDLRT 626
G V ++DL SG +V+ L H + + + +V+ + D ++R+W R
Sbjct: 455 FIYSGCSTGKVVVYDLLSGHIVKKLTNHKACVRDVSWHPFEEKIVSSSWDGNLRLWQYRQ 514
Query: 627 G 627
G
Sbjct: 515 G 515
>CE18673 [U] KOG0276 Vesicle coat complex COPI beta' subunit
Length = 1000
Score = 60.8 bits (146), Expect = 7e-09
Identities = 35/125 (28%), Positives = 59/125 (47%), Gaps = 22/125 (17%)
Query: 414 SAGSLDHSVKVWDLSKKKQIATLHGHLASISCMQIDQY-----STLITGGRDAVLKLWDI 468
+ SLD +VKVW TL GH ++C +D Y +I+G D ++K+WD
Sbjct: 159 ATASLDKTVKVWQFGSNVPNFTLEGHEKGVNC--VDYYHGGEKPYIISGADDHLVKIWDY 216
Query: 469 DKAMADEASNSSEDNDACLYTFDSHVDEITAISFDGD--NLVSGSQDRTVRQWDLNSGKC 526
N C+ T D H ++++ F + +++GS+D TVR W N+ +
Sbjct: 217 -------------QNKTCVQTLDGHAQNVSSVCFHPELPLIITGSEDSTVRLWHANTYRL 263
Query: 527 TQTID 531
T++
Sbjct: 264 ETTLN 268
>At1g52360 [U] KOG0276 Vesicle coat complex COPI beta' subunit
Length = 926
Score = 60.8 bits (146), Expect = 7e-09
Identities = 40/174 (22%), Positives = 78/174 (43%), Gaps = 26/174 (14%)
Query: 383 YDSGSKITSLPKAHDEDITCLDFDMPFGTMCSAGSLDHSVKVWDLSKKKQIATLHGHLAS 442
++ G T + + H + + F+ ++ SLD ++K+W+L TL H
Sbjct: 128 WEKGWACTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDAHQKG 187
Query: 443 ISCMQIDQYS-----TLITGGRDAVLKLWDIDKAMADEASNSSEDNDACLYTFDSHVDEI 497
++C +D ++ LITG D K+WD +C+ T + H +
Sbjct: 188 VNC--VDYFTGGDKPYLITGSDDHTAKVWDY-------------QTKSCVQTLEGHTHNV 232
Query: 498 TAISFDGD--NLVSGSQDRTVRQWDLNSGKCTQTIDIS----FATGPMRSQRNI 545
+A+ F + +++GS+D TVR W + + T++ +A G ++S R +
Sbjct: 233 SAVCFHPELPIIITGSEDGTVRIWHATTYRLENTLNYGLERVWAIGYIKSSRRV 286
>SPCC5E4.03c [K] KOG0263 Transcription initiation factor TFIID subunit TAF5
(also component of histone acetyltransferase SAGA)
Length = 643
Score = 60.1 bits (144), Expect = 1e-08
Identities = 56/216 (25%), Positives = 97/216 (43%), Gaps = 31/216 (14%)
Query: 435 TLHGHLASISCMQIDQYSTLITGG-RDAVLKLWDI--DKAMADEASNSSEDNDACLYTFD 491
T H +++C + ST+I G +++ ++LW I DK + S S ED+D +
Sbjct: 319 TFHHTNNNMNCAEFSPDSTMIACGFQESYIRLWSIKADKKSLPK-STSVEDSDGSVRLL- 376
Query: 492 SHVDEITAISFDGDN--LVSGSQDRTVRQWDLNSGKCTQTIDISFATGPMRSQRNIPLRN 549
SH + +F DN L+S S+D + R W +++ T + TGP+ P
Sbjct: 377 SHSGPVYGTTFSPDNKYLLSCSEDASARLWSVDTK--TALVAYKGHTGPVWDVAFGP--- 431
Query: 550 SVLLTKEPPAIGALQCFDAALATGTKDGIVRLWDLRSGKVVRMLEGHTDAITSLQF--DS 607
F AT + D +LW +R+ GH + + F +S
Sbjct: 432 ----------------FGHYFATASHDQTAQLWSCDHIYPLRVFAGHLSDVDCVTFHPNS 475
Query: 608 VNLVTGAMDRSIRIWDLRTGILSDVF-AYEQPITSL 642
++TG+ D++ R+WD+ G VF + QP+T++
Sbjct: 476 AYVLTGSSDKTCRLWDVHRGHSVRVFNGHTQPVTAV 511
Score = 55.5 bits (132), Expect = 3e-07
Identities = 42/181 (23%), Positives = 73/181 (40%), Gaps = 39/181 (21%)
Query: 408 PFGTMCSAGSLDHSVKVWDLSKKKQIATLHGHLASISCMQIDQYST-LITGGRDAVLKLW 466
PFG + S D + ++W + GHL+ + C+ S ++TG D +LW
Sbjct: 431 PFGHYFATASHDQTAQLWSCDHIYPLRVFAGHLSDVDCVTFHPNSAYVLTGSSDKTCRLW 490
Query: 467 DIDKAMADEASNSSEDNDACLYTFDSHVDEITAISF--DGDNLVSGSQDRTVRQWDLNSG 524
D+ + + + F+ H +TA++ DG + S + + WD+ +G
Sbjct: 491 DVHRGHS-------------VRVFNGHTQPVTAVAIAPDGHTMASADSEGLIHLWDIGTG 537
Query: 525 KCTQTIDISFATGPMRSQR-NIPLRNSVLLTKEPPAIGALQCFDAALATGTKDGIVRLWD 583
+ +T MR R NI S+ ++E L +G D VR WD
Sbjct: 538 RRIKT---------MRGHRGNI---YSLSFSRE----------STVLVSGGSDCTVRAWD 575
Query: 584 L 584
+
Sbjct: 576 V 576
>SPAC144.13c [DO] KOG0305 Anaphase promoting complex Cdc20 Cdh1 and Ama1
subunits
Length = 556
Score = 60.1 bits (144), Expect = 1e-08
Identities = 62/252 (24%), Positives = 104/252 (40%), Gaps = 58/252 (23%)
Query: 410 GTMCSAGSLDHSVKVWDLSKKKQIATLHGHLASISCMQIDQYSTLITGGRD--------- 460
GT + G+ + SV++WD + K+ T+ GH + + + + L +GGRD
Sbjct: 303 GTHLAVGTHNGSVEIWDAATCKKTRTMSGHTERVGALSWNDH-VLSSGGRDNHILHRDVR 361
Query: 461 ------AVLKL---------WDIDKAMADEASNSS------EDNDACLYTFDSHVDEITA 499
VL W+ ++ + N + + + LY+F +H+ + A
Sbjct: 362 APEHYFRVLTAHRQEVCGLEWNSNENLLASGGNDNALMVWDKFEEKPLYSFHNHIAAVKA 421
Query: 500 ISFDGDN---LVSG--SQDRTVRQWDLNSGKCTQTIDISFATGPMRSQRNIPLRNSVLLT 554
I++ L SG + DRT++ W+ G ID TG ++L +
Sbjct: 422 ITWSPHQRGILASGGGTADRTIKLWNTQRGSMLHNID----TGSQVC--------NLLWS 469
Query: 555 KEPPAIGALQCFDAALATGTKDGIVRLWDLRSGKVVRMLEGHTDAITSLQF--DSVNLVT 612
K Q + G + V LW+ S V L+GHTD + L + N+VT
Sbjct: 470 K--------QTNEFISTHGFMENEVALWNYPSVSRVGTLKGHTDRVLYLAMSPNGENIVT 521
Query: 613 GAMDRSIRIWDL 624
GA D ++R W L
Sbjct: 522 GAADETLRFWKL 533
Score = 52.4 bits (124), Expect = 2e-06
Identities = 40/167 (23%), Positives = 77/167 (45%), Gaps = 37/167 (22%)
Query: 395 AHDEDITCLDFDMPFGTMCSAGSLDHSVKVWDLSKKKQIATLHGHLASISCM--QIDQYS 452
AH +++ L+++ + S G+ D+++ VWD ++K + + H H+A++ + Q
Sbjct: 372 AHRQEVCGLEWNSNENLLASGGN-DNALMVWDKFEEKPLYSFHNHIAAVKAITWSPHQRG 430
Query: 453 TLITGG--RDAVLKLWDIDK-AMADEASNSSE--------------------DNDACLYT 489
L +GG D +KLW+ + +M S+ +N+ L+
Sbjct: 431 ILASGGGTADRTIKLWNTQRGSMLHNIDTGSQVCNLLWSKQTNEFISTHGFMENEVALWN 490
Query: 490 FDS---------HVDEI--TAISFDGDNLVSGSQDRTVRQWDLNSGK 525
+ S H D + A+S +G+N+V+G+ D T+R W L K
Sbjct: 491 YPSVSRVGTLKGHTDRVLYLAMSPNGENIVTGAADETLRFWKLFDSK 537
>SPAC13G7.08c [R] KOG0646 WD40 repeat protein
Length = 446
Score = 60.1 bits (144), Expect = 1e-08
Identities = 77/361 (21%), Positives = 142/361 (39%), Gaps = 39/361 (10%)
Query: 349 ISERKKHSTSKKIKDVGVSHRNRRRKTYPTLQQFYDSGSKITSLPKAHDEDITCLDFDMP 408
+S ++ S +K ++H + T P L ++ G +I E + C+ P
Sbjct: 29 VSTFRQSSPAKNATCTTLNHLLSAQHTRPQLN-IHNFGKEILDQSIILPEILICVQ-SSP 86
Query: 409 FGTMCSAGSLDHSVKVWDLSKKKQIATLHGHLASISCMQIDQYS-TLITGGRDAVLKLWD 467
G+ +AG+ ++ +W L I H ++ ++ L T D + W
Sbjct: 87 CGSWLAAGTEKGNLYIWSLKSGALIYFFRAHYQPLTILKFSNDGMVLFTASNDGDVFAWL 146
Query: 468 I----DKAMADEASNSSEDNDACLYTFDSHVDEITAISFDGDNLVSG-----SQDRTVRQ 518
I D+ E SNSS + F H I ++ +VSG S+D T+R
Sbjct: 147 ISTLVDQNSTFETSNSSVK---AISHFSGHKRSIVSMEIGPGPIVSGRLYTASEDNTIRI 203
Query: 519 WDLNSGKCTQTIDISFATGPMR---SQRNIPLRNSVLLTKEPPAIGA------------L 563
WD+++G TI + M S+R + + N + P G+ +
Sbjct: 204 WDVSTGNLLTTIALPSTPSCMTVDPSERVVYVGNEKGIIWIPLYTGSSTFSNNVKEKKRV 263
Query: 564 QCFDAALATGTKDGIVRLWDLRSGKVVRMLEGHTDAIT-SLQFDSVNLVTGAMDRSIRIW 622
D G+ R+ D + ++ + T ++ FD+ L++G D ++ +W
Sbjct: 264 TSVDNTTIPNAIGGMGRVVDYNDSRESSIISCQSPITTLTVSFDASLLISGDKDGNVLVW 323
Query: 623 D-LRTGILSDVFAYEQPITSLHFDLDKI-VISNNEPTVKIYNRKDGNHW------FCGED 674
D + +L + Y P++ L +DKI SN+ + + R N + C +D
Sbjct: 324 DSVSRQVLRRLVQYYSPVSFLQCKVDKISFYSNSSLSFPVLKRMITNEYLNSDVRICIQD 383
Query: 675 D 675
D
Sbjct: 384 D 384
>Hs11128017 [D] KOG0642 Cell-cycle nuclear protein contains WD-40 repeats
Length = 713
Score = 60.1 bits (144), Expect = 1e-08
Identities = 64/281 (22%), Positives = 115/281 (40%), Gaps = 55/281 (19%)
Query: 394 KAHDEDITCLDFDMPFGTMCSAGSLDHSVKVWDLSKK-----------KQIATLHGHLAS 442
++H + + L F P + S DH++K+W+L K + I T H+
Sbjct: 393 RSHFDGVRALAFH-PVEPVLVTASEDHTLKLWNLQKTVPAKKSASLDVEPIYTFRAHIGP 451
Query: 443 ISCMQIDQY-STLITGGRDAVLKLWDIDKAMADEASNSSEDNDACLYTFDSHVDEITAIS 501
+ + I +GG DA ++ W++ D + + + T H D + ++
Sbjct: 452 VLSLAISSNGEQCFSGGIDATIQWWNMPSPSVD--PYDTYEPNVLAGTLVGHTDAVWGLA 509
Query: 502 FDG--DNLVSGSQDRTVRQWDLNSGK---CTQTID--------------------ISFAT 536
+ G + L+S S D TVR W+ CT D SF T
Sbjct: 510 YSGIKNQLLSCSADGTVRLWNPQEKLPCICTYNGDKKHGIPTSVDFIGCDPAHMVTSFNT 569
Query: 537 GPMRSQRNIPLRNSVLLTKEPPAIGALQCFD-----------AALATGTKDGIVRLWDLR 585
G ++ V+L+ + + LQ + T +D ++ +D +
Sbjct: 570 GSAVIYDLETSQSLVILSSQVDS--GLQSNNHINRVVSHPTLPVTITAHEDRHIKFFDNK 627
Query: 586 SGKVVRMLEGHTDAITSLQFD--SVNLVTGAMDRSIRIWDL 624
+GK++ + H DA+TSL D + L++G+ D SIR+W+L
Sbjct: 628 TGKMIHSMVAHLDAVTSLAVDPNGIYLMSGSHDCSIRLWNL 668
>CE15742 [R] KOG0275 Conserved WD40 repeat-containing protein
Length = 510
Score = 60.1 bits (144), Expect = 1e-08
Identities = 47/219 (21%), Positives = 107/219 (48%), Gaps = 34/219 (15%)
Query: 454 LITGGRDAVLKLWD-IDKAMADEASNSSEDNDACLYTFDSHVDEITAISFDGDNLVSGSQ 512
L++G +D +++W+ ++ + + ++DN L D+ V I+ S D + L +GS
Sbjct: 229 LVSGSKDGFIEVWNYMNGKLRKDLKYQAQDN---LMMMDAAVRCIS-FSRDSEMLATGSI 284
Query: 513 DRTVRQWDLNSGKCTQTIDISFATGPMRSQRNIPLRNSVLLTKEPPAIGALQCFDAALAT 572
D ++ W + +G C + D + G +V +K+ ++ + +
Sbjct: 285 DGKIKVWKVETGDCLRRFDRAHTKGVC----------AVRFSKD----------NSHILS 324
Query: 573 GTKDGIVRLWDLRSGKVVRMLEGHTDAITSLQF--DSVNLVTGAMDRSIRIWDLRTGILS 630
G D +VR+ ++SGK ++ + GH+ IT +++ + ++++ + D SIR+W ++G
Sbjct: 325 GGNDHVVRVHGMKSGKCLKEMRGHSSYITDVRYSDEGNHIISCSTDGSIRVWHGKSGECL 384
Query: 631 DVF---AYEQPITSL----HFDLDKIVISNNEPTVKIYN 662
F + + PI ++ D ++++ N T+ + N
Sbjct: 385 STFRVGSEDYPILNVIPIPKSDPPQMIVCNRSNTLYVVN 423
Score = 54.7 bits (130), Expect = 5e-07
Identities = 40/182 (21%), Positives = 95/182 (51%), Gaps = 29/182 (15%)
Query: 496 EITAISFDGDNLVSGSQDRTVRQWDLNSGKCTQTIDISFATGPMRSQRNIPLRNSVLLTK 555
E S D + LVSGS+D + W+ +GK + D+ + ++Q N+ + ++
Sbjct: 218 ESAVFSPDANYLVSGSKDGFIEVWNYMNGKLRK--DLKY-----QAQDNLMMMDA----- 265
Query: 556 EPPAIGALQCFDAA-----LATGTKDGIVRLWDLRSGKVVRMLE-GHTDAITSLQF--DS 607
A++C + LATG+ DG +++W + +G +R + HT + +++F D+
Sbjct: 266 ------AVRCISFSRDSEMLATGSIDGKIKVWKVETGDCLRRFDRAHTKGVCAVRFSKDN 319
Query: 608 VNLVTGAMDRSIRIWDLRTG-ILSDVFAYEQPITSLHF--DLDKIVISNNEPTVKIYNRK 664
++++G D +R+ +++G L ++ + IT + + + + I+ + + ++++++ K
Sbjct: 320 SHILSGGNDHVVRVHGMKSGKCLKEMRGHSSYITDVRYSDEGNHIISCSTDGSIRVWHGK 379
Query: 665 DG 666
G
Sbjct: 380 SG 381
>At5g52820 [S] KOG0271 Notchless-like WD40 repeat-containing protein
Length = 473
Score = 60.1 bits (144), Expect = 1e-08
Identities = 50/199 (25%), Positives = 91/199 (45%), Gaps = 32/199 (16%)
Query: 435 TLHGHLASISCMQID-QYSTLITGGRDAVLKLWDIDKAMADEASNSSEDNDACLYTFDSH 493
T+ GH ++ C+ L +G D ++LWD+ + L+T H
Sbjct: 104 TIAGHAEAVLCVSFSPDGKQLASGSGDTTVRLWDLY-------------TETPLFTCKGH 150
Query: 494 VDEITAISF--DGDNLVSGSQDRTVRQWDLNSGKCTQTIDISFATGPMRSQRNIPLRNSV 551
+ + +++ DG +LVSGS+ + W+ G+ ++ S TG + I
Sbjct: 151 KNWVLTVAWSPDGKHLVSGSKSGEICCWNPKKGE----LEGSPLTGHKKWITGI------ 200
Query: 552 LLTKEPPAIGALQCFDAALATGTKDGIVRLWDLRSGKVVRMLEGHTDAITSLQFDSVNLV 611
+ EP + + C T +KDG R+WD+ K + L GHT A+T +++ ++
Sbjct: 201 --SWEPVHLSS-PC--RRFVTSSKDGDARIWDITLKKSIICLSGHTLAVTCVKWGGDGII 255
Query: 612 -TGAMDRSIRIWDLRTGIL 629
TG+ D +I++W+ G L
Sbjct: 256 YTGSQDCTIKMWETTQGKL 274
>HsM4827028 [B] KOG0639 Transducin-like enhancer of split protein (contains
WD40 repeats)
Length = 770
Score = 59.7 bits (143), Expect = 1e-08
Identities = 49/181 (27%), Positives = 78/181 (43%), Gaps = 42/181 (23%)
Query: 456 TGGRDAVLKLWDIDKAMADEASNSSEDNDACLYTFDSHVDEITAISFDGDNLVSGSQDRT 515
TGG+ V K+WDI N S + D+++ + DG L+ G + T
Sbjct: 501 TGGKGCV-KVWDIS-----HPGNKSPVSQLDCLNRDNYIRSCKLLP-DGCTLIVGGEAST 553
Query: 516 VRQWDLNSGKCTQTIDISFATGPMRSQRNIPLRNSVLLTKEPPAIGALQCFDAALATGTK 575
+ WDL + T ++++ LT PA C+ A++ +K
Sbjct: 554 LSIWDLAA-----------PTPRIKAE----------LTSSAPA-----CYALAISPDSK 587
Query: 576 -------DGIVRLWDLRSGKVVRMLEGHTDAITSLQF--DSVNLVTGAMDRSIRIWDLRT 626
DG + +WDL + +VR +GHTD + + D L TG +D ++R WDLR
Sbjct: 588 VCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISNDGTKLWTGGLDNTVRSWDLRE 647
Query: 627 G 627
G
Sbjct: 648 G 648
>Hs7657381 [R] KOG0289 mRNA splicing factor
Length = 504
Score = 59.7 bits (143), Expect = 1e-08
Identities = 79/310 (25%), Positives = 122/310 (38%), Gaps = 53/310 (17%)
Query: 359 KKIKD---VGVSHRNRRRKTYPT-------LQQFYDSGSKITSLPKAHDEDITCLDFDMP 408
+K++D V + R +R KT P L ++ S + L A I LD
Sbjct: 174 QKLQDKATVLTTERKKRGKTVPEELVKPEELSKYRQVASHV-GLHSASIPGILALDLCPS 232
Query: 409 FGTMCSAGSLDHSVKVWDLSKKKQIATLHGHLASISCMQIDQYSTLI-TGGRDAVLKLWD 467
G D +V V+D S ++ +ATL GH ++ + L+ + DA +++W
Sbjct: 233 DTNKILTGGADKNVVVFDKSSEQILATLKGHTKKVTSVVFHPSQDLVFSASPDATIRIWS 292
Query: 468 IDKAMADEASNSSEDNDACLYTFDSHVDEITAISFD--GDNLVSGSQDRTVRQWDLNSGK 525
+ A +C+ +H +T +S GD L+S S D+ D+ +G+
Sbjct: 293 VPNA-------------SCVQVVRAHESAVTGLSLHATGDYLLSSSDDQYWAFSDIQTGR 339
Query: 526 -----------CTQTI------DISFATGPMRSQRNI-PLRNSVLLTKEPPAIGALQCFD 567
C+ T + F TG M SQ I L+ + P G +
Sbjct: 340 VLTKVTDETSGCSLTCAQFHPDGLIFGTGTMDSQIKIWDLKERTNVANFPGHSGPITSIA 399
Query: 568 AA-----LATGTKDGIVRLWDLRSGKVVRMLE-GHTDAITSLQFD--SVNLVTGAMDRSI 619
+ LAT D V+LWDLR K + L+ + + SL FD L G D I
Sbjct: 400 FSENGYYLATAADDSSVKLWDLRKLKNFKTLQLDNNFEVKSLIFDQSGTYLALGGTDVQI 459
Query: 620 RIWDLRTGIL 629
I T IL
Sbjct: 460 YICKQWTEIL 469
>Hs4505731 [U] KOG0277 Peroxisomal targeting signal type 2 receptor
Length = 323
Score = 59.7 bits (143), Expect = 1e-08
Identities = 56/179 (31%), Positives = 79/179 (43%), Gaps = 39/179 (21%)
Query: 454 LITGGRDAVLKLWDIDKAMADEASNSSEDNDACLYTFDSHVDEITAISFD---GDNLV-S 509
LIT D L+LWD KA L + H E+ ++ + G+ LV S
Sbjct: 83 LITCSGDGSLQLWDTAKAAGP------------LQVYKEHAQEVYSVDWSQTRGEQLVVS 130
Query: 510 GSQDRTVRQWDLNSGKCTQTIDISFATGPMRSQRNIPLRNSVLLTKEPPAIGALQCFDAA 569
GS D+TV+ WD GK T R +I + T P I CF
Sbjct: 131 GSWDQTVKLWDPTVGKSLCTF---------RGHESI-----IYSTIWSPHIPG--CF--- 171
Query: 570 LATGTKDGIVRLWDLRSGKVVRMLEGHTDAITSLQFDSVN---LVTGAMDRSIRIWDLR 625
A+ + D +R+WD+++ V ++ H I S + N LVTGA+D S+R WDLR
Sbjct: 172 -ASASGDQTLRIWDVKAAGVRIVIPAHQAEILSCDWCKYNENLLVTGAVDCSLRGWDLR 229
>Hs4504053 [R] KOG0286 G-protein beta subunit
Length = 340
Score = 59.7 bits (143), Expect = 1e-08
Identities = 69/295 (23%), Positives = 114/295 (38%), Gaps = 61/295 (20%)
Query: 387 SKITSLPKAHDEDITCLDFDMPFGTMCSAGSLDHSVKVWDLSKK----KQIATLHGHLAS 442
+K+ ++P +TC P G + G LD+ +++L + K L H
Sbjct: 88 NKVHAIPLRSSWVMTCAY--APSGNFVACGGLDNMCSIYNLKSREGNVKVSRELSAHTGY 145
Query: 443 ISCMQIDQYSTLITGGRDAVLKLWDIDKAMADEASNSSEDNDACLYTFDSHVDEIT--AI 500
+SC + + ++T D LWDI+ F H + A+
Sbjct: 146 LSCCRFLDDNNIVTSSGDTTCALWDIETGQQKTV-------------FVGHTGDCMSLAV 192
Query: 501 SFDGDNLVSGSQDRTVRQWDLNSGKCTQTIDISFATGPMRSQRNIPLRNSVLLTKEPPAI 560
S D + +SG+ D + + WD+ G C QT T I
Sbjct: 193 SPDFNLFISGACDASAKLWDVREGTCRQT-----------------------FTGHESDI 229
Query: 561 GALQCF---DAALATGTKDGIVRLWDLRSGK--VVRMLEGHTDAITSLQFDSVN--LVTG 613
A+ CF A+ TG+ D RL+DLR+ + + E ITS+ F L G
Sbjct: 230 NAI-CFFPNGEAICTGSDDASCRLFDLRADQELICFSHESIICGITSVAFSLSGRLLFAG 288
Query: 614 AMDRSIRIWDL----RTGILSDVFAYEQPITSLHFDLDKIVISNN--EPTVKIYN 662
D + +WD R GILS ++ ++ L D + ++ + +KI+N
Sbjct: 289 YDDFNCNVWDSMKSERVGILS---GHDNRVSCLGVTADGMAVATGSWDSFLKIWN 340
>Hs21541824 [B] KOG0639 Transducin-like enhancer of split protein (contains
WD40 repeats)
Length = 770
Score = 59.7 bits (143), Expect = 1e-08
Identities = 49/181 (27%), Positives = 78/181 (43%), Gaps = 42/181 (23%)
Query: 456 TGGRDAVLKLWDIDKAMADEASNSSEDNDACLYTFDSHVDEITAISFDGDNLVSGSQDRT 515
TGG+ V K+WDI N S + D+++ + DG L+ G + T
Sbjct: 501 TGGKGCV-KVWDIS-----HPGNKSPVSQLDCLNRDNYIRSCKLLP-DGCTLIVGGEAST 553
Query: 516 VRQWDLNSGKCTQTIDISFATGPMRSQRNIPLRNSVLLTKEPPAIGALQCFDAALATGTK 575
+ WDL + T ++++ LT PA C+ A++ +K
Sbjct: 554 LSIWDLAA-----------PTPRIKAE----------LTSSAPA-----CYALAISPDSK 587
Query: 576 -------DGIVRLWDLRSGKVVRMLEGHTDAITSLQF--DSVNLVTGAMDRSIRIWDLRT 626
DG + +WDL + +VR +GHTD + + D L TG +D ++R WDLR
Sbjct: 588 VCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISNDGTKLWTGGLDNTVRSWDLRE 647
Query: 627 G 627
G
Sbjct: 648 G 648
>CE07020 [R] KOG0288 WD40 repeat protein TipD
Length = 578
Score = 59.7 bits (143), Expect = 1e-08
Identities = 47/235 (20%), Positives = 99/235 (42%), Gaps = 37/235 (15%)
Query: 415 AGSLDHSVKVWDLSKKKQIATLHGHLASISCMQIDQYSTLITGGRDAVLKLWDIDKAMAD 474
A S D +V++W+L + ++TL GH ++C++ Q + ++G D V+K+WDI
Sbjct: 353 ASSNDKNVRIWNLDNSRLLSTLSGHSDQVTCVKFYQSHSAVSGSADRVIKIWDIQNQRCS 412
Query: 475 EASNSSEDNDACLYTFDSHVDEITAISFDGDNLVSGSQDRTVRQWDLNSGKCTQTIDI-- 532
+ L+ +D T + SG D+ +R +D S +T+D+
Sbjct: 413 RS----------LFPASKVLDVATNMGASPSLFASGHFDKKLRFYDGRSTDPVRTVDMGG 462
Query: 533 ---SFATGPMRSQRNIPLRNSVLLTKEPPAIGALQCFDAA-------------------L 570
S + + R+ + + + C+ A +
Sbjct: 463 RITSLDVTMSGCELLVSTRDDTISLIDLRTFQTVHCYSAENYRTSSDLSRVVLSSGNEYV 522
Query: 571 ATGTKDGIVRLWDLRSGKVVRMLEGHTD-AITSLQFD--SVNLVTGAMDRSIRIW 622
A G+ +G + +W+ S K+ + L +++ AI SL ++ L++ + + + +W
Sbjct: 523 AAGSSNGSIFVWNRNSTKLEKQLCSNSENAIFSLSWNPTGYGLLSSSKQKFVTLW 577
Score = 58.5 bits (140), Expect = 3e-08
Identities = 60/256 (23%), Positives = 104/256 (40%), Gaps = 43/256 (16%)
Query: 410 GTMCSAGSLDHSVKVWDLSKK---KQIATLHGHLASISCMQIDQ-YSTLITGGRDAVLKL 465
G + G D ++K+W + +I TL G A+ + + ++ I D +++
Sbjct: 303 GETFATGGSDRNIKIWKVDGHGGYTRIGTLAGSNAAFTRIDYERDRKHFIASSNDKNVRI 362
Query: 466 WDIDKAMADEASNSSEDNDACLYTFDSHVDEITAISF-DGDNLVSGSQDRTVRQWDLNSG 524
W++ DN L T H D++T + F + VSGS DR ++ WD+ +
Sbjct: 363 WNL-------------DNSRLLSTLSGHSDQVTCVKFYQSHSAVSGSADRVIKIWDIQNQ 409
Query: 525 KCTQTIDISFATGPMRSQRNIPLRNSVLLTKEPPAIGALQCFDAALATGTKDGIVRLWDL 584
+C++++ P + + A +L A+G D +R +D
Sbjct: 410 RCSRSL--------------FPASKVLDVATNMGASPSL------FASGHFDKKLRFYDG 449
Query: 585 RSGKVVRMLEGHTDAITSLQ--FDSVNLVTGAMDRSIRIWDLRTGILSDVFAYEQPITSL 642
RS VR ++ ITSL L+ D +I + DLRT V Y
Sbjct: 450 RSTDPVRTVD-MGGRITSLDVTMSGCELLVSTRDDTISLIDLRT--FQTVHCYSAENYRT 506
Query: 643 HFDLDKIVISNNEPTV 658
DL ++V+S+ V
Sbjct: 507 SSDLSRVVLSSGNEYV 522
>At5g64730 [S] KOG0316 Conserved WD40 repeat-containing protein
Length = 343
Score = 59.7 bits (143), Expect = 1e-08
Identities = 58/235 (24%), Positives = 96/235 (40%), Gaps = 35/235 (14%)
Query: 394 KAHDEDITCLDFDMPFGTMCSAGSLDHSVKVWDLSKKKQIATLHGHLASISCMQI-DQYS 452
K+H ++ + CS G D V WD+S + I GH ++ ++ D S
Sbjct: 57 KSHGREVRDVHVTSDNAKFCSCGG-DRQVYYWDVSTGRVIRKFRGHDGEVNAVKFNDSSS 115
Query: 453 TLITGGRDAVLKLWDIDKAMADEASNSSEDNDACLYTFDSHVDEITAISFDGDNLVSGSQ 512
+++ G D L++WD S+S E + D+ +D + ++ ++ GS
Sbjct: 116 VVVSAGFDRSLRVWDC-------RSHSVEP----VQIIDTFLDTVMSVVLTKTEIIGGSV 164
Query: 513 DRTVRQWDL--------NSGKCTQTIDIS-----FATGPMRSQRNIPLRNSVLL------ 553
D TVR +D+ N G+ I IS G + S + R + L
Sbjct: 165 DGTVRTFDMRIGREMSDNLGQPVNCISISNDGNCVLAGCLDSTLRLLDRTTGELLQVYKG 224
Query: 554 --TKEPPAIGALQCFDAALATGTKDGIVRLWDLRSGKVVRMLEGHTDAITSLQFD 606
+K L DA + G++DG+V WDL KV+ H D + S+ D
Sbjct: 225 HISKSFKTDCCLTNSDAHVIGGSEDGLVFFWDLVDAKVLSKFRAH-DLVNSIDVD 278
>7301430 [B] KOG0639 Transducin-like enhancer of split protein (contains
WD40 repeats)
Length = 719
Score = 59.7 bits (143), Expect = 1e-08
Identities = 58/225 (25%), Positives = 98/225 (42%), Gaps = 46/225 (20%)
Query: 431 KQIATL-HGHLA-SISCMQIDQYSTLITGGRDAVLKLWDIDKAMADEASNSSEDNDACLY 488
+QI TL HG + +++ +Y + TGG+ V K+WDI + N + +
Sbjct: 425 RQINTLSHGEVVCAVTISNPTKY--VYTGGKGCV-KVWDIS-----QPGNKNPVSQLDCL 476
Query: 489 TFDSHVDEITAISFDGDNLVSGSQDRTVRQWDLNSGKCTQTIDISFATGPMRSQRNIPLR 548
D+++ + + DG L+ G + + WDL S T ++++
Sbjct: 477 QRDNYIRSVKLLP-DGRTLIVGGEASNLSIWDLAS-----------PTPRIKAE------ 518
Query: 549 NSVLLTKEPPAIGALQCFDAALATGTK-------DGIVRLWDLRSGKVVRMLEGHTDAIT 601
LT PA C+ A++ +K DG + +WDL + +VR +GHTD +
Sbjct: 519 ----LTSAAPA-----CYALAISPDSKVCFSCCSDGNIAVWDLHNEILVRQFQGHTDGAS 569
Query: 602 SLQF--DSVNLVTGAMDRSIRIWDLRTGILSDVFAYEQPITSLHF 644
+ D L TG +D ++R WDLR G + I SL +
Sbjct: 570 CIDISPDGSRLWTGGLDNTVRSWDLREGRQLQQHDFSSQIFSLGY 614
>Hs7662430 [S] KOG0300 WD40 repeat-containing protein
Length = 494
Score = 59.3 bits (142), Expect = 2e-08
Identities = 64/315 (20%), Positives = 121/315 (38%), Gaps = 57/315 (18%)
Query: 346 KSDISERKKHSTSKKIKDVGVSHRNRRRKTYPTLQQFYDSGS-KITSLPKAHDEDITCLD 404
K + + HSTS+ + + +++ K + + + ++ H + I +
Sbjct: 104 KGQLKTKASHSTSQLSQKLKTTYKASTSKIVSSFKTTTSRAACQLVKEYIGHRDGIWDVS 163
Query: 405 FDMPFGTMCSAGSLDHSVKVWDLSKKKQIATLHGHLASISCMQIDQYSTL-ITGGRDAVL 463
+ S DH+ +W + K + GH+ S++ ++ L +T D
Sbjct: 164 VAKTQPVVLGTASADHTALLWSIETGKCLVKYAGHVGSVNSIKFHPSEQLALTASGDQTA 223
Query: 464 KLW------DIDKAMADEASNSSEDNDAC----------------------LYTFDSHVD 495
+W + +AD S S ED C L + SH
Sbjct: 224 HIWRYAVQLPTPQPVAD-TSISGEDEVECSDKDEPDLDGDVSSDSPTIRVPLTSLKSHQG 282
Query: 496 EITAISF--DGDNLVSGSQDRTVRQWDLNSGKCTQTIDISFATGPMRSQRNIPLRNSVLL 553
+ A + G V+ S DRT +D+ + + ++ TG + + + L
Sbjct: 283 VVIASDWLVGGKQAVTASWDRTANLYDVETSELVHSL-----TGHDQELTHCCTHPTQRL 337
Query: 554 TKEPPAIGALQCFDAALATGTKDGIVRLWDLRSGKV--VRMLEGHTDAITSLQFD-SVNL 610
+ T ++D RLWD R + V + +GHTD +TS F N+
Sbjct: 338 ----------------VVTSSRDTTFRLWDFRDPSIHSVNVFQGHTDTVTSAVFTVGDNV 381
Query: 611 VTGAMDRSIRIWDLR 625
V+G+ DR++++WDL+
Sbjct: 382 VSGSDDRTVKVWDLK 396
Score = 58.9 bits (141), Expect = 3e-08
Identities = 41/137 (29%), Positives = 66/137 (47%), Gaps = 15/137 (10%)
Query: 389 ITSLPKAHDEDITCLDFDMPFGTMCSAGSLDHSVKVWDLSKKKQIATLHGHLASIS-CMQ 447
+TSL K+H + D+ + G S D + ++D+ + + +L GH ++ C
Sbjct: 274 LTSL-KSHQGVVIASDW-LVGGKQAVTASWDRTANLYDVETSELVHSLTGHDQELTHCCT 331
Query: 448 IDQYSTLITGGRDAVLKLWDIDKAMADEASNSSEDNDACLYTFDSHVDEITAISFD-GDN 506
++T RD +LWD D + +S + F H D +T+ F GDN
Sbjct: 332 HPTQRLVVTSSRDTTFRLWDF----RDPSIHS-------VNVFQGHTDTVTSAVFTVGDN 380
Query: 507 LVSGSQDRTVRQWDLNS 523
+VSGS DRTV+ WDL +
Sbjct: 381 VVSGSDDRTVKVWDLKN 397
>Hs5453581 [R] KOG0274 Cdc4 and related F-box and WD-40 proteins
Length = 252
Score = 59.3 bits (142), Expect = 2e-08
Identities = 40/165 (24%), Positives = 76/165 (45%), Gaps = 26/165 (15%)
Query: 505 DNLVSGSQDRTVRQWDLNSGKCTQTIDISFATGPMRSQRNIPLRNSVLLTKEPPAIGALQ 564
+ LVSG +D V+ WD+++GKC +T K+P I A +
Sbjct: 6 NRLVSGGRDCQVKVWDVDTGKCLKTFR----------------------HKDP--ILATR 41
Query: 565 CFDAALATGTKDGIVRLWDLRSGKVVRMLEGHTDAITSLQFDSVNLVTGAMDRSIRIWDL 624
D + + + G+V++W + ++V+ L GH A+ L FD +L++G+ D + W +
Sbjct: 42 INDTYIVSSCERGLVKVWHIAMAQLVKTLSGHEGAVKCLFFDQWHLLSGSTDGLVMAWSM 101
Query: 625 RTGILSDVFAYEQP--ITSLHFDLDKIVISNNEPTVKIYNRKDGN 667
+ A++ P + + +I+ + ++IYN GN
Sbjct: 102 VGKYERCLMAFKHPKEVPDVSLLFLRIISACANGKIRIYNFLHGN 146
>Hs22046076 [R] KOG0266 WD40 repeat-containing protein
Length = 177
Score = 59.3 bits (142), Expect = 2e-08
Identities = 40/140 (28%), Positives = 58/140 (40%), Gaps = 19/140 (13%)
Query: 396 HDEDITCLDFDMPFGTMCSAGSLDHSVKVWDLSKKKQIAT---LHGHLASISCMQIDQYS 452
H + I DF P + GS D +V +WDL + L GH A+ISC+
Sbjct: 8 HRDSIQSSDFS-PTVNCLATGSWDSTVHIWDLRMVTPAVSHQALEGHSANISCLCYSASG 66
Query: 453 TLITGGRDAVLKLWDIDKAMADEASNSSEDNDACLYTFDSHVDEITAISFDGDNL--VSG 510
L +G D + +W + L HV + +I+F D L S
Sbjct: 67 LLASGSWDKTIHIW-------------KPTTSSLLIQLKGHVTWVKSIAFSPDELWLASA 113
Query: 511 SQDRTVRQWDLNSGKCTQTI 530
R V+ WD N+GKC +T+
Sbjct: 114 GYSRMVKVWDCNTGKCLETL 133
>At5g51980 [R] KOG0274 Cdc4 and related F-box and WD-40 proteins
Length = 437
Score = 59.3 bits (142), Expect = 2e-08
Identities = 44/166 (26%), Positives = 73/166 (43%), Gaps = 20/166 (12%)
Query: 479 SSEDNDACLYTFDSHVDEITAISFDG--DNLVSGSQDRTVRQWDLNSGKCTQTIDISFAT 536
S ++ A L D H ++ I+ D L +GS+D T+R WD SG+CT + +
Sbjct: 136 SKGESFALLTQLDGHEKLVSGIALPSGSDKLYTGSKDETLRVWDCASGQCTGVLKLGGEI 195
Query: 537 GPMRSQR--------------NIPLRNSVLLTKEPPAIGALQCFDAALATGTKDGIVRLW 582
G + S+ NI L+ + +L L GT+DG + W
Sbjct: 196 GCVLSEGPWLLVGMPNLVKAWNIETNADQSLSGPVGQVYSLVVGTDLLFAGTQDGSILAW 255
Query: 583 DLRSG----KVVRMLEGHTDAITSLQFDSVNLVTGAMDRSIRIWDL 624
+ + L GHT A+ +L + L +G+MD++I++W L
Sbjct: 256 RYNAATNCFEPSASLTGHTLAVVTLYVGANRLYSGSMDKTIKVWSL 301
>Hs4557491 [A] KOG0640 mRNA cleavage stimulating factor complex; subunit 1
Length = 431
Score = 58.9 bits (141), Expect = 3e-08
Identities = 52/216 (24%), Positives = 92/216 (42%), Gaps = 42/216 (19%)
Query: 454 LITGGRDAVLKLWDIDKAMA----------DEASNSSEDNDACLYTFDSHVDEITAISFD 503
+ TG DA +K+ D ++ +A +E + + +N + T HVDE+T ++F
Sbjct: 123 IATGSADASIKILDTERMLAKSAMPIEVMMNETAQQNMENHPVIRTLYDHVDEVTCLAFH 182
Query: 504 GDN--LVSGSQDRTVRQWDLNSGKCTQTIDISFATGPMRSQRNIPLRNSVLLTKEPPA-- 559
L SGS+D T++ +D + + +RS P + +L+ + P
Sbjct: 183 PTEQILASGSRDYTLKLFDYSKPSAKRAFKYIQEAEMLRSISFHPSGDFILVGTQHPTLR 242
Query: 560 ---IGALQCF----------DAALA-----------TGTKDGIVRLWDLRSGKVVRMLEG 595
I QCF DA + TG+KDG ++LWD S + + E
Sbjct: 243 LYDINTFQCFVSCNPQDQHTDAICSVNYNSSANMYVTGSKDGCIKLWDGVSNRCITTFEK 302
Query: 596 HTDA--ITSLQF--DSVNLVTGAMDRSIRIWDLRTG 627
D + S F +S +++ D ++W++ TG
Sbjct: 303 AHDGAEVCSAIFSKNSKYILSSGKDSVAKLWEISTG 338
Score = 51.6 bits (122), Expect = 4e-06
Identities = 62/269 (23%), Positives = 116/269 (43%), Gaps = 60/269 (22%)
Query: 374 KTYPTLQQFYDSGSKITSLPKAHDEDITCLDFDMPFGTMCSAGSLDHSVKVWDLSK---K 430
+ +P ++ YD H +++TCL F P + ++GS D+++K++D SK K
Sbjct: 161 ENHPVIRTLYD-----------HVDEVTCLAFH-PTEQILASGSRDYTLKLFDYSKPSAK 208
Query: 431 KQIATLHGH--LASISCMQIDQYSTLITGGRDAVLKLWDIDKAMADEASNSSEDNDACLY 488
+ + L SIS + ++ G + L+L+DI+ + N
Sbjct: 209 RAFKYIQEAEMLRSISFHPSGDF--ILVGTQHPTLRLYDINTFQCFVSCNPQ-------- 258
Query: 489 TFDSHVDEITAISFDG--DNLVSGSQDRTVRQWDLNSGKCTQTIDISFATGPMRSQRNIP 546
D H D I +++++ + V+GS+D ++ WD S +C T + + + S I
Sbjct: 259 --DQHTDAICSVNYNSSANMYVTGSKDGCIKLWDGVSNRCITTFEKAHDGAEVCSA--IF 314
Query: 547 LRNSVLLTKEPPAIGALQCFDAALATGTKDGIVRLWDLRSGKVVRMLEG---------HT 597
+NS + L++G KD + +LW++ +G+ + G T
Sbjct: 315 SKNSKYI----------------LSSG-KDSVAKLWEISTGRTLVRYTGAGLSGRQVHRT 357
Query: 598 DAITSLQFDSVNLVTGAMDRSIRIWDLRT 626
A+ + D V L+ S+ WD RT
Sbjct: 358 QAVFNHTEDYV-LLPDERTISLCCWDSRT 385
>Hs22048015 [R] KOG0266 WD40 repeat-containing protein
Length = 546
Score = 58.9 bits (141), Expect = 3e-08
Identities = 56/239 (23%), Positives = 102/239 (42%), Gaps = 37/239 (15%)
Query: 416 GSLDHSVKVWDLSKKKQIATLHGHLASISCMQIDQYST--LITGGRDAVLKLWDIDKAMA 473
G+ D + V+D + ++ + H ++ + S+ L +GG DA+ K+WD
Sbjct: 283 GANDGCLYVFDREQNRRTLQIESHEDDVNAVAFADISSQILFSGGDDAICKVWD------ 336
Query: 474 DEASNSSEDNDACLYTFDSHVDEITAISFDGDN--LVSGSQDRTVRQWDL---------- 521
ED+ + H D IT I GD L+S S+D+T++ WD+
Sbjct: 337 --RRTMREDDPKPVGALAGHQDGITFIDSKGDARYLISNSKDQTIKLWDIRRFSSREGME 394
Query: 522 --NSGKCTQTIDISFATGPMRSQRNIPL-RNSVLLTKEPPAI--GALQC-FDAALATGTK 575
Q D + P ++ R + L +S L+T + ++C F +TG +
Sbjct: 395 ASRQAATQQNWDYRWQQVPKKAWRKLKLPGDSSLMTYRGHGVLHTLIRCRFSPIHSTGQQ 454
Query: 576 -------DGIVRLWDLRSGKVVRMLEGHTDAITSLQFD--SVNLVTGAMDRSIRIWDLR 625
G V ++DL SG +V+ L H + + + +V+ + D ++R+W R
Sbjct: 455 FIYSGCSTGKVVVYDLLSGHIVKKLTNHKACVRDVSWHPFEEKIVSSSWDGNLRLWQYR 513
>7302603 [R] KOG0289 mRNA splicing factor
Length = 505
Score = 58.9 bits (141), Expect = 3e-08
Identities = 57/249 (22%), Positives = 92/249 (36%), Gaps = 49/249 (19%)
Query: 389 ITSLPKAHDED---ITCLDFDMPFGTMCSAGSLDHSVKVWDLSKKKQIATLHGHLASIS- 444
+ S P H I LD + + G D + V++ ++ +A L GH I+
Sbjct: 211 VASHPGLHSASVPGILALDINSADHSKILTGGNDKNATVFNKDTEQMVAILKGHTKKITK 270
Query: 445 CMQIDQYSTLITGGRDAVLKLWDIDKAMADEASNSSEDNDACLYTFDSHVDEITAISFD- 503
+ T+ITG D +++W + + H +T +S
Sbjct: 271 VIYHPNEDTVITGSPDMNIRIWHVPTSQTQ-------------LLLRCHEGPVTGLSLHP 317
Query: 504 -GDNLVSGSQDRTVRQWDLNSG----KCTQTIDISFATGPMRSQRNIPLRNSVLLTKEPP 558
GD L+S S D+ D+ +G K T ++ T I
Sbjct: 318 TGDYLLSTSSDKHWAFSDIRTGRLLTKVIDTAEVGLTTAQFHPDGLI------------- 364
Query: 559 AIGALQCFDAALATGTKDGIVRLWDLRSGKVVRMLEGHTDAITSLQF--DSVNLVTGAMD 616
TGT D V++WDL+ V GHT I+++ F + L T A D
Sbjct: 365 -----------FGTGTVDSQVKIWDLKEQSNVANFPGHTGPISAISFSENGYYLATAADD 413
Query: 617 RSIRIWDLR 625
+++WDLR
Sbjct: 414 ACVKLWDLR 422
>7301145 [R] KOG0644 Uncharacterized conserved protein contains WD40 repeat
and BROMO domains
Length = 1225
Score = 58.9 bits (141), Expect = 3e-08
Identities = 57/248 (22%), Positives = 111/248 (43%), Gaps = 36/248 (14%)
Query: 387 SKITSLPKAHDEDITCLDFDMPFGTMCSAGSLDHSVKVWDLSKKKQIATLHGHLASISCM 446
+K+ H + C+ FD G G+ D +K+W + + +ATL G + I+ +
Sbjct: 173 TKLLRRTVGHLSSVYCVLFDRT-GRYIITGADDLLIKIWSAADGRLLATLRGASSEITDI 231
Query: 447 QIDQYSTLITGGR-DAVLKLWDIDKAMADEASNSSEDNDACLYTFDSHVDEITAISF--- 502
I+ +T++ G D +L++WD+ + + +H IT+++F
Sbjct: 232 AINLDNTMLAAGSLDHILRVWDM-------------QTTSPIAVLSAHTGMITSVNFCPS 278
Query: 503 ---DGDNLVSGSQDRTVRQWDLNSGKCTQTIDISFATGPMRSQRNI-PLRNSVLLTKEPP 558
D LV+ S D ++ W ++ + + I+FA P + + P + ++ T P
Sbjct: 279 PRSDLKYLVTTSTDGSIAFWQYSTPRGQK---ITFAPKPTQYHEKLRPGQAQMMCTTFSP 335
Query: 559 AIGALQCFDAALATGTKDGIVRLWDLRSGKVVRML--EGHTDAITSLQFD--SVNLVTGA 614
LA G+ D VR++ + R+L E +TDA+ S+Q+ + ++G+
Sbjct: 336 G-------GIFLAAGSADHHVRVYMMGEDGPKRILETEAYTDAVDSVQWSHRGLRFISGS 388
Query: 615 MDRSIRIW 622
D + IW
Sbjct: 389 KDGTAHIW 396
>YNL317w [A] KOG0284 Polyadenylation factor I complex subunit PFS2
Length = 465
Score = 58.5 bits (140), Expect = 3e-08
Identities = 82/328 (25%), Positives = 131/328 (39%), Gaps = 79/328 (24%)
Query: 375 TYPTLQQFYDSGSKITSLPKAHDEDITCLDFDMPFGTMCSAGSLDHSVKVW--DLSKKKQ 432
T+ TL Q +DS +T++ +HD D +G D +K+W + S K+
Sbjct: 126 TFETLMQAHDSA--VTTMKYSHDSD------------WMISGDADGMIKIWQPNFSMVKE 171
Query: 433 IATLHGHLASISCMQIDQY-STLITGGRDAVLKLWDIDKAMADEA-SNSSEDNDACLYTF 490
I H SI M S +T D +LK+W+ + S D +C
Sbjct: 172 IDA--AHTESIRDMAFSSNDSKFVTCSDDNILKIWNFSNGKQERVLSGHHWDVKSC---- 225
Query: 491 DSHVDEITAISFDGDNLVSGSQDRTVRQWDLNSGKCTQTIDISFATGPMRSQRNIPLRNS 550
D H + + S S+D V+ WD SG C +I + +++
Sbjct: 226 DWHPEM--------GLIASASKDNLVKLWDPRSGNCISSI--------------LKFKHT 263
Query: 551 VLLTKEPPAIGALQCFDAALATGTKDGIVRLWDLR-SGKVVRMLEGHTDAITSLQFDSVN 609
VL T+ P G L L +KD R++D+R S K + + TD +T L++ +N
Sbjct: 264 VLKTRFQPTKGNL------LMAISKDKSCRVFDIRYSMKELMCVRDETDYMT-LEWHPIN 316
Query: 610 ---LVTGAMDRSIRIWD----LRTGILSDVFAYEQPITSLHFD----------LDKIV-- 650
D S++ +D L IL+ +A+++ ITSL ++ D+ +
Sbjct: 317 ESMFTLACYDGSLKHFDLLQNLNEPILTIPYAHDKCITSLSYNPVGHIFATAAKDRTIRF 376
Query: 651 ------ISNNEPTVKIYNRKDGNHWFCG 672
I N YN K N WF G
Sbjct: 377 WTRARPIDPNAYDDPTYNNKKINGWFFG 404
>SPAC25H1.08c [S] KOG0296 Angio-associated migratory cell protein (contains WD40
repeats)
Length = 399
Score = 58.5 bits (140), Expect = 3e-08
Identities = 78/346 (22%), Positives = 133/346 (37%), Gaps = 99/346 (28%)
Query: 396 HDEDITCLDFDMPFGTMCSAGSLDHSVKVWDLSKKKQIATLHGHLASISCMQIDQYSTLI 455
H + + + + +C++G D +WD++ +QI L GH SI + T I
Sbjct: 60 HKDSVFSVSINPVHSNLCASGGGDDLGYIWDITTGEQICQLTGHKDSIVAIDWSFDGTYI 119
Query: 456 -TGGRDAVLKLWDIDKAMADEASNSSEDNDACLYTFDSHVDEITAISF--DGDNLVSGSQ 512
TGG D+ ++LW ++S E T VDEI +S+ G L +G
Sbjct: 120 ATGGMDSQVRLW--------KSSTGFE-----FITAFETVDEIVWLSWHPKGLFLAAGCN 166
Query: 513 DRTVRQWDLNSGKCTQTIDISFATGPMRSQRNIP---------LRNSVLLTKEPPAIGAL 563
D ++ W L SGK Q + T P+ + + IP + +S L PA GA
Sbjct: 167 DGSIWMWSLPSGKVVQV--MYGHTAPVNAGKFIPPGVGKRLATVDDSGTLIVWNPATGAP 224
Query: 564 QC----------------------FDA-----ALATGTKDGIVRLWDLRSGKVVRMLEGH 596
+C FD L G G V++ ++ S ++ LE
Sbjct: 225 ECRMSSDDHRFDPGNEETAAGWTSFDCNAEGNVLFLGGSSGKVKVVNINSSHILASLEAQ 284
Query: 597 TDAITSLQ-------------------FDSVN------------------------LVTG 613
T+++ ++ +DS + L+T
Sbjct: 285 TESVEAIALCTALPICACASVDGTVALYDSASLKFRKSLPHEQAVIDCKFLPNTPYLLTA 344
Query: 614 AMDRSIRIWDLRTG-ILSDVFAYEQPITSLHFDLD-KIVISNNEPT 657
D IR WD+R+G +L + +++PI + D K V++ ++ T
Sbjct: 345 CADCVIRKWDVRSGQLLGEYTGHQEPILCMAITPDGKRVVTGSDDT 390
>Hs4758030 [U] KOG0292 Vesicle coat complex COPI alpha subunit
Length = 1224
Score = 58.5 bits (140), Expect = 3e-08
Identities = 57/248 (22%), Positives = 100/248 (39%), Gaps = 28/248 (11%)
Query: 396 HDEDITCLDFDMPFGTMCSAGSLDHSVKVWDLSKKKQIATLHGHLASI-SCMQIDQYSTL 454
HD + +DF S G D+ +KVW+ ++ + TL GHL I + +Y +
Sbjct: 50 HDGPVRGIDFHKQQPLFVSGGD-DYKIKVWNYKLRRCLFTLLGHLDYIRTTFFHHEYPWI 108
Query: 455 ITGGRDAVLKLWDIDKAMADEASNSSEDNDACLYTFDSHVDEITAISFDGDNLVSGSQDR 514
++ D +++W N C+ T +H D +VS S D+
Sbjct: 109 LSASDDQTIRVW-----------NWQSRTCVCVLTGHNHYVMCAQFHPTEDLVVSASLDQ 157
Query: 515 TVRQWDLNSGKCTQTIDISFATGPMRSQRNIPLRNSVLLTKEPPAIG--------ALQCF 566
TVR WD+ SG + + +R + L + + G A
Sbjct: 158 TVRVWDI-SGLRKKNLSPGAVESDVRGITGVDLFGTTDAVVKHVLEGHDRGVNWAAFHPT 216
Query: 567 DAALATGTKDGIVRLWDLRSGKV--VRMLEGHTDAITSLQFDSVN--LVTGAMDRSIRIW 622
+ +G D V++W + K V GH + ++ F +++ + D+SIR+W
Sbjct: 217 MPLIVSGADDRQVKIWRMNESKAWEVDTCRGHYNNVSCAVFHPRQELILSNSEDKSIRVW 276
Query: 623 DL--RTGI 628
D+ RTG+
Sbjct: 277 DMSKRTGV 284
>Hs17462432 [I] KOG1933 Cholesterol transport protein (Niemann-Pick C disease
protein)
Length = 1278
Score = 58.5 bits (140), Expect = 3e-08
Identities = 36/118 (30%), Positives = 65/118 (54%), Gaps = 2/118 (1%)
Query: 560 IGALQCFDAALATGTKDGIVRLWDLRSGKVVRMLEGHTDAITSLQFD-SVNLVTGAMDRS 618
I AL+ L TG++D +R++ L + L+GH+ AIT++ D ++ L +G D +
Sbjct: 1081 ITALKAAAGRLVTGSQDHTLRVFRLEDSCCLFTLQGHSGAITTVYIDQTMVLASGGQDGA 1140
Query: 619 IRIWDLRTGI-LSDVFAYEQPITSLHFDLDKIVISNNEPTVKIYNRKDGNHWFCGEDD 675
I +WD+ TG +S VFA+ +TSL ++ S + + I++R G ++ + D
Sbjct: 1141 ICLWDVLTGSRVSHVFAHRGDVTSLTCTTSCVISSGLDDLISIWDRSTGIKFYSIQQD 1198
Score = 54.3 bits (129), Expect = 6e-07
Identities = 49/201 (24%), Positives = 86/201 (42%), Gaps = 39/201 (19%)
Query: 391 SLPKAHDEDITCLDFDMPFGTMCSAGSLDHSVKVWDLSKKKQIATLHGHLASISCMQIDQ 450
++P AH + IT L G + + GS DH+++V+ L + TL GH +I+ + IDQ
Sbjct: 1072 TVPCAHQKPITALK--AAAGRLVT-GSQDHTLRVFRLEDSCCLFTLQGHSGAITTVYIDQ 1128
Query: 451 YSTLITGGRDAVLKLWDIDKAMADEASNSSEDNDACLYTFDSHVDEITAISFDGDNLVSG 510
L +GG+D + LWD+ + F +H ++T+++ ++S
Sbjct: 1129 TMVLASGGQDGAICLWDV------------LTGSRVSHVF-AHRGDVTSLTCTTSCVISS 1175
Query: 511 SQDRTVRQWDLNSGKCTQTIDISFATGPMRSQRNIPLRNSVLLTKEPPAIGALQCFDAAL 570
D + WD ++G +I G ++G + D L
Sbjct: 1176 GLDDLISIWDRSTGIKFYSIQQDLGCG--------------------ASLGVIS--DNLL 1213
Query: 571 ATGTKDGIVRLWDLRSGKVVR 591
TG + G V WDL G +++
Sbjct: 1214 VTGGQ-GCVSFWDLNYGDLLQ 1233
>Hs14150114 [S] KOG0316 Conserved WD40 repeat-containing protein
Length = 315
Score = 58.5 bits (140), Expect = 3e-08
Identities = 51/224 (22%), Positives = 92/224 (40%), Gaps = 39/224 (17%)
Query: 410 GTMCSAGSLDHSVKVWDLSKKKQIATLHGHLASI--SCMQIDQYSTLITGGRDAVLKLWD 467
G C D ++K+W+ + + T GH + + D S+L +GG D + LWD
Sbjct: 37 GNYCLTCGSDKTLKLWNPLRGTLLRTYSGHGYEVLDAAGSFDN-SSLCSGGGDKAVVLWD 95
Query: 468 IDKAMADEASNSSEDNDACLYTFDSHVDEITAISFDGDN--LVSGSQDRTVRQWDLNSGK 525
+ + F H ++ + F+ + ++SGS D ++R WD
Sbjct: 96 VASGQV-------------VRKFRGHAGKVNTVQFNEEATVILSGSIDSSIRCWD----- 137
Query: 526 CTQTIDISFATGPMRSQRNIPLRNSVLLTKEPPAIGALQCFDAALATGTKDGIVRLWDLR 585
RS+R P++ L + + +++ D + G+ DG VR +DLR
Sbjct: 138 -------------CRSRRPEPVQT---LDEARDGVSSVKVSDHEILAGSVDGRVRRYDLR 181
Query: 586 SGKVVRMLEGHTDAITSLQFDSVNLVTGAMDRSIRIWDLRTGIL 629
G++ G T D + ++D ++R+ D TG L
Sbjct: 182 MGQLFSDYVGSPITCTCFSRDGQCTLVSSLDSTLRLLDKDTGEL 225
Score = 57.0 bits (136), Expect = 1e-07
Identities = 42/148 (28%), Positives = 70/148 (46%), Gaps = 33/148 (22%)
Query: 487 LYTFDSHVDEITAISF--DGDNLVSGSQDRTVRQWDLNSGKCTQTIDISFATGPMRSQRN 544
L T D + A+ F DG+ ++ D+T++ W+
Sbjct: 18 LKTLDCGQGAVRAVRFNVDGNYCLTCGSDKTLKLWN------------------------ 53
Query: 545 IPLRNSVLLTKEP---PAIGALQCFD-AALATGTKDGIVRLWDLRSGKVVRMLEGHTDAI 600
PLR ++L T + A FD ++L +G D V LWD+ SG+VVR GH +
Sbjct: 54 -PLRGTLLRTYSGHGYEVLDAAGSFDNSSLCSGGGDKAVVLWDVASGQVVRKFRGHAGKV 112
Query: 601 TSLQF--DSVNLVTGAMDRSIRIWDLRT 626
++QF ++ +++G++D SIR WD R+
Sbjct: 113 NTVQFNEEATVILSGSIDSSIRCWDCRS 140
>At4g29830 [R] KOG4155 FOG: WD40 repeat
Length = 321
Score = 58.5 bits (140), Expect = 3e-08
Identities = 58/291 (19%), Positives = 120/291 (40%), Gaps = 38/291 (13%)
Query: 389 ITSLPKAHDEDITCLDF-----DMPFGTMCSAGSLDHSVKVWDLSKKKQIATLHGHLASI 443
+ S+ AH++ + + D P + GSLD +VK+W + + T GH +
Sbjct: 6 LKSIENAHEDSVWAATWVPATEDRP--ALLLTGSLDETVKLWRPDELDLVRTNTGHSLGV 63
Query: 444 SCMQIDQYSTLITGGR-DAVLKLWDIDKAMADEASNSSEDNDACLYTFDSHVDEITAISF 502
+ + + D+ ++++D+D +A + ++ E+ + F
Sbjct: 64 AALAAHPSGIIAASSSIDSFVRVFDVD-------------TNATIAVLEAPPSEVWGMQF 110
Query: 503 DGDNL---VSGSQDRTVRQWDLNSGKCTQTIDISFATGPMRSQRNIPLRNSVLLTKEPPA 559
+ V+G +V+ WD S + T+ I P S + + + + P
Sbjct: 111 EPKGTILAVAGGSSASVKLWDTASWRLISTLSIPRPDAPKPSDKTSSKKFVLSVAWSPNG 170
Query: 560 IGALQCFDAALATGTKDGIVRLWDLRSGKVVRMLEGHTDAITSLQFDSVN---LVTGAMD 616
LA G+ DG + ++D+ K++ LEGH + SL F V+ L +G+ D
Sbjct: 171 --------KRLACGSMDGTICVFDVDRSKLLHQLEGHNMPVRSLVFSPVDPRVLFSGSDD 222
Query: 617 RSIRIWDLR-TGILSDVFAYEQPITSLHFDLD--KIVISNNEPTVKIYNRK 664
+ + D +L + + + S+ D I +++ TV++++ K
Sbjct: 223 GHVNMHDAEGKTLLGSMSGHTSWVLSVDASPDGGAIATGSSDRTVRLWDLK 273
>CE20251_2 [U] KOG0276 Vesicle coat complex COPI beta' subunit
Length = 287
Score = 58.5 bits (140), Expect = 3e-08
Identities = 34/127 (26%), Positives = 65/127 (50%), Gaps = 16/127 (12%)
Query: 412 MCSAGSLDHSVKVWDLSKKKQIATLHGHLASISCMQIDQYSTLITGGRDAVLKLWDIDKA 471
M +GSLD ++KVW L +++ I TL GH ++C++ +++G D + +WDI
Sbjct: 150 MFVSGSLDKTLKVWKLGEQESICTLEGHEKGVNCVEFLTGGRIVSGSDDCSICVWDI--- 206
Query: 472 MADEASNSSEDNDACLYTF-DSHVDEITAISFDGDNLVSGSQDRTVRQWDLNSGKCTQTI 530
C+ T ++H + +T ++ ++SG++D TV+ W NS +
Sbjct: 207 ----------QTQKCIETLKNAHKNNVTFVTPFKTWIISGAEDSTVKIW--NSQTFSLEK 254
Query: 531 DISFATG 537
+++F G
Sbjct: 255 ELNFEKG 261
>YOR212w [R] KOG0286 G-protein beta subunit
Length = 423
Score = 58.2 bits (139), Expect = 4e-08
Identities = 68/306 (22%), Positives = 126/306 (40%), Gaps = 78/306 (25%)
Query: 385 SGSKITSLPKAHDEDITCLDFDMPFGTMCSAGSLDHSVKVWDLSKKKQIAT-----LHGH 439
SG K ++P ++C P T+ ++ L+++ ++ +SK+ ++A GH
Sbjct: 123 SGLKQNAIPLDSQWVLSCAI--SPSSTLVASAGLNNNCTIYRVSKENRVAQNVASIFKGH 180
Query: 440 LASISCMQIDQYSTLITGGRDAVLKLWDIDKA-----------------MADEASNSSED 482
IS ++ + ++T D LWDI KA + +E ++ +
Sbjct: 181 TCYISDIEFTDNAHILTASGDMTCALWDIPKAKRVREYSDHLGDVLALAIPEEPNSENSS 240
Query: 483 N-------DACLYTFDSHV-----------DEITAISF--DGDNLVSGSQDRTVRQWDLN 522
N D Y +DS +I A+ F DG ++V+GS + + +DL
Sbjct: 241 NTFASCGSDGYTYIWDSRSPSAVQSFYVNDSDINALRFFKDGMSIVAGSDNGAINMYDLR 300
Query: 523 SGKCTQTIDI--------------------SFATGP--MRSQRNIPLRNSVLLTKEPPAI 560
S T + + A P ++S + L N +++ + A
Sbjct: 301 SDCSIATFSLFRGYEERTPTPTYMAANMEYNTAQSPQTLKSTSSSYLDNQGVVSLDFSAS 360
Query: 561 GALQ--CFDAALATGTKDGIVRLWDLRSGKVVRMLEGHTDAITSLQF--DSVNLVTGAMD 616
G L C+ T G V +WD+ G++V LEGH +T ++ D + + TG+ D
Sbjct: 361 GRLMYSCY-------TDIGCV-VWDVLKGEIVGKLEGHGGRVTGVRSSPDGLAVCTGSWD 412
Query: 617 RSIRIW 622
+++IW
Sbjct: 413 STMKIW 418
>SPAC2E1P5.05 [A] KOG0299 U3 snoRNP-associated protein (contains WD40 repeats)
Length = 524
Score = 58.2 bits (139), Expect = 4e-08
Identities = 61/247 (24%), Positives = 96/247 (38%), Gaps = 27/247 (10%)
Query: 417 SLDHSVKVWDLSKKKQIATLHGHLASISCMQ-IDQYSTLITGGRDAVLKLWDIDKAMADE 475
S D S+KVW L + I TL GH I + + + + GGRD +LW I +
Sbjct: 269 SADRSIKVWSLDQMSYIETLFGHQDVIFGVDALARERCVSVGGRDRTSRLWKIVEESQLV 328
Query: 476 ASNSSEDNDACLYTFDSHVDEITAISFDGDNLVSGSQDRTVRQWDLNSGKCTQTIDISFA 535
+ A + VD + I D D+ V+GS + + W + K T ++
Sbjct: 329 FRSGGTSMKATAGYMEGSVDCVAMI--DEDHFVTGSDNGVIALWSVQRKKPLFTYPLAHG 386
Query: 536 TGPMRSQRNIPLRNS---VLLTKEPPAIGALQC--FDAALATGTKDGIVRLWDLRSGKVV 590
P+ + S V + +P I +L + A+G+ DG +RLW + G +
Sbjct: 387 LDPILAPGRHSAETSPDPVTIPPQPRWITSLAAIPYSNLFASGSWDGNIRLWKIAEG--L 444
Query: 591 RMLEGHTDAITSLQFDSVN---------------LVTGAMDRSIRI--WDLRTGILSDVF 633
R E T A + +N V A R R+ W GI + F
Sbjct: 445 RSFEPLTIATPLSVYGCINSLSLSLQGKGKQSEVRVFAACGRETRVGRWKTLRGIPNSGF 504
Query: 634 AYEQPIT 640
+ P+T
Sbjct: 505 VFNIPLT 511
>At2g47990 [S] KOG0310 Conserved WD40 repeat-containing protein
Length = 530
Score = 58.2 bits (139), Expect = 4e-08
Identities = 60/246 (24%), Positives = 106/246 (42%), Gaps = 39/246 (15%)
Query: 410 GTMCSAGSLDHSVKVWDLSKKKQIATLHGHLASISCMQ--IDQYSTLITGGRDAVLKLWD 467
G + +A L V+V+D+ ++ + TL H A ++ + L++GG D V+K WD
Sbjct: 105 GALFAACDLSGVVQVFDIKERMALRTLRSHSAPARFVKYPVQDKLHLVSGGDDGVVKYWD 164
Query: 468 IDKAMADEASNSSEDNDACLYTFDSHVDEITAISFDGDNLVSGSQDRTVRQWDLNSGKCT 527
+ A +D C + + + + LV+GS D TV+ WD
Sbjct: 165 VAGATVISDLLGHKDYVRC--------GDCSPV--NDSMLVTGSYDHTVKVWDARVHTSN 214
Query: 528 QTIDISFATGPMRSQRNIPLRNSVLLTKEPPAIGALQCFDAALATGTKDGIVRLWDL-RS 586
+I+ +P+ + V L P+ G + A A G V++WDL
Sbjct: 215 WIAEIN---------HGLPVEDVVYL----PSGGLI-----ATAGGNS---VKVWDLIGG 253
Query: 587 GKVVRMLEGHTDAITSLQFDSV-----NLVTGAMDRSIRIWDLRTGILSDVFAYEQPITS 641
GK+V +E H +TSL+ + LV+ A+D ++++D ++ + P+ S
Sbjct: 254 GKMVCSMESHNKTVTSLRVARMESAESRLVSVALDGYMKVFDYGRAKVTYSMRFPAPLMS 313
Query: 642 LHFDLD 647
L D
Sbjct: 314 LGLSPD 319
>At1g24530 [R] KOG4155 FOG: WD40 repeat
Length = 418
Score = 58.2 bits (139), Expect = 4e-08
Identities = 49/218 (22%), Positives = 90/218 (40%), Gaps = 40/218 (18%)
Query: 417 SLDHSVKVWDLSKKKQIATLHGHLASISCMQIDQYSTLITGGRDAVLKLWDIDKAMADEA 476
S D ++K+W S + ++ H +++ + + T+ TG D +++W A
Sbjct: 212 SWDKTLKIWRASDLRCKESIKAHDDAVNAIAVSTNGTVYTGSADRRIRVW---------A 262
Query: 477 SNSSEDNDACLYTFDSHVDEITAISF--DGDNLVSGSQDRTVRQWDLNSGKCTQTIDISF 534
+ E + T + H + A++ DG L SGS DR++ W+ T +
Sbjct: 263 KPTGEKRHTLVATLEKHKSAVNALALNDDGSVLFSGSCDRSILVWERE-----DTSNYMA 317
Query: 535 ATGPMRSQRNIPLRNSVLLTKEPPAIGALQCFDAALATGTKDGIVRLWDL---RSGKVVR 591
G +R AI +L L +G+ D VR+W S +
Sbjct: 318 VRGALRG--------------HDKAILSLFNVSDLLLSGSADRTVRIWRRGPDSSYSCLE 363
Query: 592 MLEGHTDAITSLQF-------DSVNLVTGAMDRSIRIW 622
+L GHT + SL D V++++G++D ++ W
Sbjct: 364 VLSGHTKPVKSLAAVREKELDDVVSIISGSLDGEVKCW 401
>At2g26490 [R] KOG4155 FOG: WD40 repeat
Length = 465
Score = 57.4 bits (137), Expect = 7e-08
Identities = 67/327 (20%), Positives = 132/327 (39%), Gaps = 66/327 (20%)
Query: 360 KIKDVGVSHRN----RRRKTYPTLQQFYDSGSKI----------TSLPKAHDEDITCLDF 405
KI+ VS +N +R T PTL+ + + K T+L H + ++CL
Sbjct: 155 KIRVWKVSPKNQSLHKRSGTLPTLKDIFKASLKPRNYVEVKKHRTALWIKHADAVSCLSL 214
Query: 406 DMPFGTMCSAGSLDHSVKVWDLSKKKQIATLHGHLASISCMQIDQYSTLITGGRDAVLKL 465
+ G + SA S D ++KVW ++ K + ++ H +++ + + + +G D +K
Sbjct: 215 NDEQGLLYSA-SWDRTIKVWRIADSKCLESIPAHDDAVNSVVSTTEAIVFSGSADGTVKA 273
Query: 466 WDIDKAMADEASNSSEDNDACLYTFDSHVDEIT--AISFDGDNLVSGSQDRTVRQWDLNS 523
W D+ + T +T A+S +G + GS D V W
Sbjct: 274 WKRDQ-------QGKYTKHTLMQTLTKQESAVTALAVSKNGAAVYFGSSDGLVNFW---- 322
Query: 524 GKCTQTIDISFATGPMRSQRNIPLRNSVLLTKEPPAIGALQCFDAALATGTKDGIVRLWD 583
+R L +L A+ L+ + + +G+ D + +W
Sbjct: 323 ------------------EREKQLNYGGILKGHKLAVLCLEVAGSLVFSGSADKTICVWK 364
Query: 584 LRSGKV---VRMLEGHTDAITSLQFDSVN-----------LVTGAMDRSIRIWDLRTGIL 629
R G + + +L GHT + L ++ + +G++D+S+++W +
Sbjct: 365 -RDGNIHTCLSVLTGHTGPVKCLAVEADREASERRDKKWIVYSGSLDKSVKVWG-----V 418
Query: 630 SDVFAYEQPITSLHFDLDKIVISNNEP 656
S+ F ++ + + VIS++EP
Sbjct: 419 SESFIDMNQMSMMQQQQQQHVISHSEP 445
>YGL137w [U] KOG0276 Vesicle coat complex COPI beta' subunit
Length = 889
Score = 57.0 bits (136), Expect = 1e-07
Identities = 51/219 (23%), Positives = 94/219 (42%), Gaps = 40/219 (18%)
Query: 416 GSLDHSVKVWDLSKKKQIATLHGH---LASISCMQIDQYSTLITGGRDAVLKLWDIDKAM 472
GS D ++V++ + +++ H + SI+ Y +++G D +KLW+
Sbjct: 73 GSDDFRIRVFNYNTGEKVVDFEAHPDYIRSIAVHPTKPY--VLSGSDDLTVKLWNW---- 126
Query: 473 ADEASNSSEDNDACLYTFDSHVDEITAISF---DGDNLVSGSQDRTVRQWDLNSGKCTQT 529
E+N A TF+ H + ++F D SG DRTV+ W L T
Sbjct: 127 --------ENNWALEQTFEGHEHFVMCVAFNPKDPSTFASGCLDRTVKVWSLGQS----T 174
Query: 530 IDISFATGPMRSQRNIPLRNSVLLTKEPPAIGALQCFDAALATGTKDGIVRLWDLRSGKV 589
+ + TG +R + + L +P I T + D +++WD ++
Sbjct: 175 PNFTLTTG---QERGVNYVDYYPLPDKPYMI-----------TASDDLTIKIWDYQTKSC 220
Query: 590 VRMLEGHTDAITSLQFDSV--NLVTGAMDRSIRIWDLRT 626
V LEGH ++ F +++G+ D +++IW+ T
Sbjct: 221 VATLEGHMSNVSFAVFHPTLPIIISGSEDGTLKIWNSST 259
>SPAC31A2.14 [S] KOG0308 Conserved WD40 repeat-containing protein
Length = 962
Score = 57.0 bits (136), Expect = 1e-07
Identities = 61/244 (25%), Positives = 94/244 (38%), Gaps = 74/244 (30%)
Query: 438 GHLASISCMQIDQYST----------LITGGRDAVLKLWDI------------------- 468
GH +C+ + +Y + L +GGRD L WDI
Sbjct: 21 GHRLDANCLVLGRYFSEQGSAPVTRALYSGGRDGQLFGWDIGYDYGKASQPLAKIQAHSA 80
Query: 469 ---DKAMADEA----SNSSED----------NDACLYTFDSHVDEITAISF----DGDNL 507
D A+ ++ S SS+ N +CL T H D + +S +
Sbjct: 81 WVNDIALTHDSEGVISCSSDSTVKLWKPHVLNASCLSTIGEHTDYVKRVSIPKYSKSPLV 140
Query: 508 VSGSQDRTVRQWDLNSG----KCTQTIDISFATGPMRSQRNIPLRNSVLLTKEPPAIGAL 563
SG D+ + WD N G + Q D S GP ++ N+++ A G L
Sbjct: 141 ASGGLDKRIIVWDYNVGQEVMRFEQLPDCSLVVGPRSGVYSLAANNNII------ANGGL 194
Query: 564 QCFDAALATGTKDGIVRLWDLRSGKVVRMLEGHTDAITSLQF--DSVNLVTGAMDRSIRI 621
Q KD ++LWD S K + L GHTD + + D ++T + D +I++
Sbjct: 195 Q----------KD--IQLWDCVSKKRITDLVGHTDNVRDILISDDGRTILTASSDATIKL 242
Query: 622 WDLR 625
W LR
Sbjct: 243 WSLR 246
>Hs5803221 [A] KOG0306 WD40-repeat-containing subunit of the 18S rRNA
processing complex
Length = 943
Score = 57.0 bits (136), Expect = 1e-07
Identities = 55/219 (25%), Positives = 93/219 (42%), Gaps = 30/219 (13%)
Query: 396 HDEDITCLDFDMPFGTMCSAGSLDHSVKVWDLSKKKQIATLHGHLASIS-CMQIDQYSTL 454
H IT L +D G + S GS D + VWD+ + + L GH +I+ + + + + L
Sbjct: 106 HKAAITTLKYDQLGGRLAS-GSKDTDIIVWDVINESGLYRLKGHKDAITQALFLREKNLL 164
Query: 455 ITGGRDAVLKLWDIDKAMADEASNSSEDNDACLYTFDSHVDEITAISF--DGDNLVSGSQ 512
+T G+D ++K WD+ D C T H E+ + + L++G+
Sbjct: 165 VTSGKDTMVKWWDL-------------DTQHCFKTMVGHRTEVWGLVLLSEEKRLITGAS 211
Query: 513 DRTVRQWDLNSGKCTQTIDISFATGPMRSQRNIP-------LRNSVLLTKEPPAIGALQC 565
D +R WD+ Q I+ P + + + P + T E P L C
Sbjct: 212 DSELRVWDI---AYLQEIEDPEEPDPKKIKGSSPGIQDTLEAEDGAFETDEAPEDRILSC 268
Query: 566 FDAALATGTKDGIVRLWDLRSGKVVRMLEGH-TDAITSL 603
A + ++G R+ +L K R+L H TD++ L
Sbjct: 269 RKA--GSIMREGRDRVVNLAVDKTGRILACHGTDSVLEL 305
Score = 56.2 bits (134), Expect = 2e-07
Identities = 43/146 (29%), Positives = 64/146 (43%), Gaps = 17/146 (11%)
Query: 378 TLQQFYDSGSKITSLPKAHDEDITCLDFDMPFGTMCSAGSLDHSVKVWDLSKKKQIATLH 437
T++ FY K H + C+D G + + GS D +VK+W L +L
Sbjct: 572 TVKIFYVDTLKFFLSLYGHKLPVICMDISHD-GALIATGSADRNVKIWGLDFGDCHKSLF 630
Query: 438 GHLASISCMQIDQYSTLI-TGGRDAVLKLWDIDKAMADEASNSSEDNDACLYTFDSHVDE 496
H S+ +Q S L T G+D +K WD DK + T + H E
Sbjct: 631 AHDDSVMYLQFVPKSHLFFTAGKDHKIKQWDADKFEH-------------IQTLEGHHQE 677
Query: 497 I--TAISFDGDNLVSGSQDRTVRQWD 520
I A+S GD +VS S D+++R W+
Sbjct: 678 IWCLAVSPSGDYVVSSSHDKSLRLWE 703
Score = 52.0 bits (123), Expect = 3e-06
Identities = 77/341 (22%), Positives = 131/341 (37%), Gaps = 52/341 (15%)
Query: 323 NKEEEHSPLLSKSIYQQLQDHEKKSDISERKKHSTSKKIKDVGVSH--RNRRRKTYPTLQ 380
+K EE P ++ + LQD +I TS KIK + H + +
Sbjct: 334 SKGEEEDPEVN--VEMSLQD-----EIQRVTNIKTSAKIKSFDLIHSPHGELKAVFLLQN 386
Query: 381 QFYDSGSKITSLPK------------AHDEDITCLDFDMPFGTMCSAGSLDHSVKVWDLS 428
+ S SLP H D+ L F + SA + S+K+W+ S
Sbjct: 387 NLVELYSLNPSLPTPQPVRTSRITIGGHRSDVRTLSFSSDNIAVLSAAA--DSIKIWNRS 444
Query: 429 KKKQIATLHGHLASISCMQIDQYSTLITGGRDAVLKLWDIDKAMADEASNSSEDNDACLY 488
+ I T+ A S + ++ G + L+L+D+ AS + L
Sbjct: 445 TLQCIRTMTCEYALCSFF-VPGDRQVVIGTKTGKLQLYDL-------ASGN------LLE 490
Query: 489 TFDSHVDEITAISFDGDN--LVSGSQDRTVRQWDLNSGKCTQTIDISFATGPMRSQRNIP 546
T D+H + ++S D V+G D++V+ WD K + + ++ R +
Sbjct: 491 TIDAHDGALWSMSLSPDQRGFVTGGADKSVKFWDFELVKDENSTQKRLS---VKQTRTLQ 547
Query: 547 LRNSVLLTKEPPAIGALQCFDAALATGTKDGIVRLWDLRSGKVVRMLEGHTDAITSLQF- 605
L VL P LA D V+++ + + K L GH + +
Sbjct: 548 LDEDVLCVSYSPN-------QKLLAVSLLDCTVKIFYVDTLKFFLSLYGHKLPVICMDIS 600
Query: 606 -DSVNLVTGAMDRSIRIWDLRTG-ILSDVFAYEQPITSLHF 644
D + TG+ DR+++IW L G +FA++ + L F
Sbjct: 601 HDGALIATGSADRNVKIWGLDFGDCHKSLFAHDDSVMYLQF 641
>CE17845 [R] KOG0286 G-protein beta subunit
Length = 356
Score = 57.0 bits (136), Expect = 1e-07
Identities = 59/257 (22%), Positives = 102/257 (38%), Gaps = 54/257 (21%)
Query: 408 PFGTMCSAGSLDHSVKVWDLS-------KKKQIATLHGHLASISCMQIDQYSTLITGGRD 460
P M + G LD+ V LS KK+Q+AT +++ + ++ D + ++TG D
Sbjct: 120 PSSQMIACGGLDNKCSVVPLSFEDDIIQKKRQVATHTSYMSCCTFLRSD--NLILTGSGD 177
Query: 461 AVLKLWDIDKAMADEASNSSEDNDACLYTFDSHVDEITAISFD----GDNLVSGSQDRTV 516
+ +WD++ + F H ++ AI G+ +S D+
Sbjct: 178 STCAIWDVESGQL-------------IQNFHGHTGDVFAIDVPKCDTGNTFISAGADKHS 224
Query: 517 RQWDLNSGKCTQTIDISFA-TGPMRSQRNIPLRNSVLLTKEPPAIGALQCFDAALATGTK 575
WD+ SG+C Q+ + A +R N A ATG+
Sbjct: 225 LVWDIRSGQCVQSFEGHEADINTVRFHPN----------------------GDAFATGSD 262
Query: 576 DGIVRLWDLRSGKVVRMLEGHT--DAITSLQFDSVN--LVTGAMDRSIRIWD-LRTGILS 630
D RL+DLR+ + V + E + + + F L G D + +WD L+ S
Sbjct: 263 DATCRLFDLRADRQVCVYEKESILFPVNGVDFSLSGRILFAGYGDYRVGVWDSLKCARHS 322
Query: 631 DVFAYEQPITSLHFDLD 647
++ +E I+ L D
Sbjct: 323 VLYGHENRISCLRTSPD 339
>At2g22040 [R] KOG0315 G-protein beta subunit-like protein (contains WD40
repeats)
Length = 312
Score = 57.0 bits (136), Expect = 1e-07
Identities = 49/184 (26%), Positives = 83/184 (44%), Gaps = 30/184 (16%)
Query: 507 LVSGSQDRTVRQWDLNSGKC----------TQTIDISFATGPMRSQRN------------ 544
L + S D+T+R W +G+C ++++ G + + N
Sbjct: 13 LATASHDQTIRLWQARTGRCYFSFRYPDLHVNRLELTPEKGKLVAACNPHIRLFDLRSYN 72
Query: 545 --IPLRNSVLLTKEPPAIGALQCFDAALATGTKDGIVRLWDLRSGKVVRMLEGHTDAIT- 601
IP+RN V TK A+G Q + +G++DG V++WDLR + R + T
Sbjct: 73 PHIPVRNFVSHTKNVMAVG-FQYTGHMMYSGSEDGSVKIWDLRVRECQREFRSVSPVNTV 131
Query: 602 SLQFDSVNLVTGAMDRSIRIWDLRTGILSDVFAYE--QPITSL--HFDLDKIVISNNEPT 657
L + L++G + +IR+WDLR + S E PI SL +D +V +N+ T
Sbjct: 132 VLHPNQTELISGDQNGNIRVWDLRADLCSCELVPEVGTPIRSLTVMWDGTMVVAANDRGT 191
Query: 658 VKIY 661
++
Sbjct: 192 CYVW 195
>7293756 [R] KOG0286 G-protein beta subunit
Length = 346
Score = 57.0 bits (136), Expect = 1e-07
Identities = 58/248 (23%), Positives = 96/248 (38%), Gaps = 46/248 (18%)
Query: 408 PFGTMCSAGSLDHSVKVWDLSKK------KQIATLHGHLASISCMQIDQYSTLITGGRDA 461
P G + G +D+ V+D++ + K + L G+ +S + LITG D
Sbjct: 111 PSGNFVACGGMDNQCTVYDVNNRDASGVAKMVKELMGYEGFLSSCRFLDDGHLITGSGDM 170
Query: 462 VLKLWDIDKAMADEASNSSEDNDACLYTFDSHVDEITAISFDGD--NLVSGSQDRTVRQW 519
+ WD++K + F+ H +I +S D ++GS D+T + W
Sbjct: 171 KICHWDLEKGVKT-------------MDFNGHAGDIAGLSLSPDMKTYITGSVDKTAKLW 217
Query: 520 DLN---------------SGKCTQTIDISFAT-GPMRSQRNIPLRNSVLLTK-EPPAIG- 561
D+ S C FA+ ++ R LR + + EPP
Sbjct: 218 DVREEGHKQMFFGHDMDVSSVCYHPSGFGFASCSEDQTARMYDLRADQQIAQYEPPQKNT 277
Query: 562 -----ALQCFDAALATGTKDGIVRLWDLRSGKVVRMLEGHTDAIT--SLQFDSVNLVTGA 614
AL L G +G V WD + L GH + IT SL + + L + +
Sbjct: 278 GFTSCALSTSGRYLMCGGIEGNVHSWDTMKQRHTGTLSGHENRITCISLCPNGMCLASTS 337
Query: 615 MDRSIRIW 622
D+ +R+W
Sbjct: 338 WDQQVRLW 345
>YGL003c [DO] KOG0305 Anaphase promoting complex Cdc20 Cdh1 and Ama1
subunits
Length = 566
Score = 56.6 bits (135), Expect = 1e-07
Identities = 56/244 (22%), Positives = 98/244 (39%), Gaps = 42/244 (17%)
Query: 410 GTMCSAGSLDHSVKVWDLSKKKQIATLHGHLASISCMQIDQYSTLITGGRDAVLKLWDID 469
G+ + G + V+++D+ K+K I TL GH+ ++C+ + + L +G RD + D+
Sbjct: 314 GSHLAVGQANGLVEIYDVMKRKCIRTLSGHIDRVACLSWNNH-VLTSGSRDHRILHRDVR 372
Query: 470 KAMADEASNSSEDNDACLYTFDSHVDEITAISFD-GDN-LVSGSQDRTVRQWDLNSGKCT 527
D T +SH E+ + ++ DN L SG D V ++ S
Sbjct: 373 MP------------DPFFETIESHTQEVCGLKWNVADNKLASGGNDNVVHVYEGTSKSPI 420
Query: 528 QTIDIS----------------FATGPMRSQRNIPLRNSVLLTKEPPAIGALQCFDAALA 571
T D ATG + R + + N K Q + +
Sbjct: 421 LTFDEHKAAVKAMAWSPHKRGVLATGGGTADRRLKIWNVNTSIKMSDIDSGSQICNMVWS 480
Query: 572 TGTKDGI---------VRLWDLRSGKVVRMLEGHTDAI--TSLQFDSVNLVTGAMDRSIR 620
T + + + LWD S + +L+GH+ + +L D +V+GA D ++R
Sbjct: 481 KNTNELVTSHGYSKYNLTLWDCNSMDPIAILKGHSFRVLHLTLSNDGTTVVSGAGDETLR 540
Query: 621 IWDL 624
W L
Sbjct: 541 YWKL 544
>SPAC29A4.18 [B] KOG0264 Nucleosome remodeling factor subunit CAF1/NURF55/MSI1
Length = 431
Score = 56.6 bits (135), Expect = 1e-07
Identities = 52/205 (25%), Positives = 80/205 (38%), Gaps = 33/205 (16%)
Query: 429 KKKQIATLHGHLASISCMQIDQYSTLITGGRDAVLKLWDIDKAMADEASNSSEDNDACLY 488
K K T H + C TL++G +DA L WD++ A N S+
Sbjct: 175 KPKYRLTKHTQPCTSVCWNFLSKGTLVSGSQDATLSCWDLN------AYNESDSASVLKV 228
Query: 489 TFDSHVDEITAISFD---GDNLVSGSQDRTVRQWDLN--SGKCTQTIDISFATGPMRSQR 543
SH +++ + F D L S S D+ + D+ + +GP+ S
Sbjct: 229 HISSHEKQVSDVRFHYKHQDLLASVSYDQYLHVHDIRRPDASTKPARSVHAHSGPIHSVA 288
Query: 544 NIPLRNSVLLTKEPPAIGALQCFDAALATGTKDGIVRLWDLRS-GKVVRMLEGHTDAITS 602
P D LAT + D + LWDLR+ + + LEGH D +T
Sbjct: 289 FNPHN------------------DFILATCSTDKTIALWDLRNLNQRLHTLEGHEDIVTK 330
Query: 603 LQF---DSVNLVTGAMDRSIRIWDL 624
+ F + L + + DR +WDL
Sbjct: 331 ISFSPHEEPILASTSADRRTLVWDL 355
>Hs5032159 [B] KOG0273 Beta-transducin family (WD-40 repeat) protein
Length = 577
Score = 56.6 bits (135), Expect = 1e-07
Identities = 60/239 (25%), Positives = 91/239 (37%), Gaps = 53/239 (22%)
Query: 403 LDFDMPFGTMCSAGSLDHSVKVWDLSKKKQIATLHGHLASISCMQIDQYSTLITG-GRDA 461
LD D T ++ S D + V L + + T GH ++ ++ D L+ D
Sbjct: 375 LDVDWQNNTTFASCSTDMCIHVCRLGCDRPVKTFQGHTNEVNAIKWDPSGMLLASCSDDM 434
Query: 462 VLKLWDIDKAMADEASNSSEDNDACLYTFDSHVDEITAISFDGDN-----------LVSG 510
LK+W + + + C++ +H EI I + L S
Sbjct: 435 TLKIWSMKQ-------------EVCIHDLQAHNKEIYTIKWSPTGPATSNPNSNIMLASA 481
Query: 511 SQDRTVRQWDLNSGKCTQTIDISFATGPMRSQRNIPLRNSVLLTK--EPPAIGALQCFDA 568
S D TVR WD+ G CT T LTK EP A
Sbjct: 482 SFDSTVRLWDIERGVCTHT-----------------------LTKHQEPVYSVAFSPDGK 518
Query: 569 ALATGTKDGIVRLWDLRSGKVVRMLEGHTDAITSLQFDSVNLVTG--AMDRSIRIWDLR 625
LA+G+ D V +W+ +SG +V G T I + +++ G A D S+ + DLR
Sbjct: 519 YLASGSFDKCVHIWNTQSGNLVHSYRG-TGGIFEVCWNARGDKVGASASDGSVCVLDLR 576
>Hs18599374 [Z] KOG0313 Microtubule binding protein YTM1 (contains WD40
repeats)
Length = 423
Score = 56.6 bits (135), Expect = 1e-07
Identities = 54/224 (24%), Positives = 99/224 (44%), Gaps = 25/224 (11%)
Query: 416 GSLDHSVKVWDLSKKKQIATLHGH---LASISCMQIDQYSTLI-TGGRDAVLKLWDIDKA 471
GS D + ++W L + K I T+ GH + ++ ++ D S L+ + D + LW+
Sbjct: 117 GSYDKTSRIWSL-EGKSIMTIVGHTDVVKDVAWVKKDSLSCLLLSASMDQTILLWEW--- 172
Query: 472 MADEASNSSEDNDACLYTFDSHVDEITAISFDGDN--LVSGSQDRTVRQWDLNSGKCTQT 529
N + L+ H + +I+ DG SGS D+ ++ W
Sbjct: 173 ------NVERNKVKALHCCRGHAGSVDSIAVDGSGTKFCSGSWDKMLKIWSTVPTDEEDE 226
Query: 530 IDISFATGPMRSQRNIPLRNS----VLLTKEPPAIGALQCFDAA-LATGTKDGIVRLWDL 584
++ S P + Q+ L + V L+ A+ ++ DA + + + D +R+WD+
Sbjct: 227 MEES-TNRPRKKQKTEQLGLTRTPIVTLSGHMEAVSSVLWSDAEEICSASWDHTIRVWDV 285
Query: 585 RSGKVVRMLEGHTDAITSLQFDSV--NLVTGAMDRSIRIWDLRT 626
SG + L G+ + + + L +G+ DR IR+WD RT
Sbjct: 286 ESGSLKSTLTGNK-VFNCISYSPLCKRLASGSTDRHIRLWDPRT 328
>Hs15150805 [B] KOG0273 Beta-transducin family (WD-40 repeat) protein
Length = 522
Score = 56.2 bits (134), Expect = 2e-07
Identities = 59/236 (25%), Positives = 91/236 (38%), Gaps = 49/236 (20%)
Query: 403 LDFDMPFGTMCSAGSLDHSVKVWDLSKKKQIATLHGHLASISCMQIDQYSTLITG-GRDA 461
LD D ++ S D + V L + T GH ++ ++ D L+ D
Sbjct: 322 LDVDWQNNMTFASCSTDMCIHVCRLGCDHPVKTFQGHTNEVNAIKWDPSGMLLASCSDDM 381
Query: 462 VLKLWDIDKAMADEASNSSEDNDACLYTFDSHVDEITAISFDGDN-----------LVSG 510
LK+W + + DAC++ +H EI I + L S
Sbjct: 382 TLKIWSMKQ-------------DACVHDLQAHSKEIYTIKWSPTGPATSNPNSSIMLASA 428
Query: 511 SQDRTVRQWDLNSGKCTQTIDISFATGPMRSQRNIPLRNSVLLTKEPPAIGALQCFDAAL 570
S D TVR WD+ G CT T+ M+ Q EP A L
Sbjct: 429 SFDSTVRLWDVEQGVCTHTL--------MKHQ-------------EPVYSVAFSPDGKYL 467
Query: 571 ATGTKDGIVRLWDLRSGKVVRMLEGHTDAITSLQFDSVNLVTG--AMDRSIRIWDL 624
A+G+ D V +W+ +SG +V +G T I + +++ G A D S+ + DL
Sbjct: 468 ASGSFDKYVHIWNTQSGSLVHSYQG-TGGIFEVCWNARGDKVGASASDGSVCVLDL 522
>At3g18140 [R] KOG0315 G-protein beta subunit-like protein (contains WD40
repeats)
Length = 305
Score = 56.2 bits (134), Expect = 2e-07
Identities = 50/219 (22%), Positives = 94/219 (42%), Gaps = 38/219 (17%)
Query: 414 SAGSLDHSVKVWDLSKKKQIATLHGHLASISCMQIDQYSTLITGGRDAVLKLWDIDKAMA 473
+ S DH+++ W+ + T+ + ++ ++I + + ++L+D++
Sbjct: 9 ATASYDHTIRFWEAETGRCYRTIQYPDSHVNRLEITPDKHYLAAACNPHIRLFDVN---- 64
Query: 474 DEASNSSEDNDACLYTFDSHVDEITAISFDGDN--LVSGSQDRTVRQWDLNSGKCTQTID 531
SNS + + T+DSH + + A+ F D + SGS+D TV+ WDL
Sbjct: 65 ---SNSPQP----VMTYDSHTNNVMAVGFQCDAKWMYSGSEDGTVKIWDLR--------- 108
Query: 532 ISFATGPMRSQRNIPLRNSVLLTKEPPAIGALQCFDAALATGTKDGIVRLWDLRSGKVVR 591
A G + ++ N+V+L L +G ++G +R+WDLR+
Sbjct: 109 ---APGCQKEYESVAAVNTVVLHPN----------QTELISGDQNGNIRVWDLRANSCSC 155
Query: 592 MLEGHTD-AITSL--QFDSVNLVTGAMDRSIRIWDLRTG 627
L D A+ SL +D +V + +W L G
Sbjct: 156 ELVPEVDTAVRSLTVMWDGTMVVAANNRGTCYVWRLLRG 194
Score = 51.6 bits (122), Expect = 4e-06
Identities = 45/184 (24%), Positives = 81/184 (43%), Gaps = 31/184 (16%)
Query: 507 LVSGSQDRTVRQWDLNSGKCTQTID-----------------ISFATGP------MRSQR 543
L + S D T+R W+ +G+C +TI ++ A P + S
Sbjct: 8 LATASYDHTIRFWEAETGRCYRTIQYPDSHVNRLEITPDKHYLAAACNPHIRLFDVNSNS 67
Query: 544 NIPLRNSVLLTKEPPAIGALQCFDAALATGTKDGIVRLWDLRSGKVVRMLEGHTDAIT-S 602
P+ T A+G QC + +G++DG V++WDLR+ + E T
Sbjct: 68 PQPVMTYDSHTNNVMAVG-FQCDAKWMYSGSEDGTVKIWDLRAPGCQKEYESVAAVNTVV 126
Query: 603 LQFDSVNLVTGAMDRSIRIWDLRTG-----ILSDVFAYEQPITSLHFDLDKIVISNNEPT 657
L + L++G + +IR+WDLR ++ +V + +T + +D +V +NN T
Sbjct: 127 LHPNQTELISGDQNGNIRVWDLRANSCSCELVPEVDTAVRSLTVM-WDGTMVVAANNRGT 185
Query: 658 VKIY 661
++
Sbjct: 186 CYVW 189
>7303128 [A] KOG0299 U3 snoRNP-associated protein (contains WD40 repeats)
Length = 774
Score = 56.2 bits (134), Expect = 2e-07
Identities = 67/298 (22%), Positives = 114/298 (37%), Gaps = 44/298 (14%)
Query: 344 EKKSDISERKKHSTSKKIKDVGVSHRNRRRKTY-------PTLQQFYDSGSKITSLPKAH 396
EK +S R++ T KK + +S Y P +Q + K K H
Sbjct: 196 EKSDVLSHREEPETGKKRRSHVISICLSSDMKYLALAEGGPHIQIWCPQTMKHIKTLKGH 255
Query: 397 DEDITCLDFDMPFGTMCSAGSLDHSVKVWDLSKKKQIATLHGHLASISCMQ-IDQYSTLI 455
+ + L F + SA D SVK+W L + + +L GH +++ + + + +
Sbjct: 256 RDSVAGLVFRKGTHDLYSAAK-DRSVKIWSLDEMAYVESLFGHQTAVTSIDALSRERAIT 314
Query: 456 TGGRDAVLKLWDIDKAMADEASNSSEDNDACLYTFDSHVDEITAISFDGD-NLVSGSQDR 514
GG D L++W I + ++ H D I + + D + VSG D
Sbjct: 315 AGGSDCSLRIWKI--------------TEESQLIYNGHKDSIECVKYINDEHFVSGGMDG 360
Query: 515 TVRQWDLNSGKCTQTIDISFATGPMRSQRNIPLRNSVLLTKEPPAIGALQCFDAALATGT 574
+ W K T ++ G I V+ T +ATG+
Sbjct: 361 AIGLWSALKKKPICTTQLAHGVGENGVANWITAIAVVVNTD-------------LVATGS 407
Query: 575 KDGIVRLWDLR-SGKVVRMLEGHTDA--ITSLQFDS----VNLVTGAMDRSIRIWDLR 625
DG VRLW + + + +++ + A I L F++ + + TG R R W L+
Sbjct: 408 CDGCVRLWQTNPNARKMNLIQSISIAGFINGLAFNADGSKLFVATGQEHRLGRWWRLK 465
>SPBC31F10.13c [DK] KOG0973 Histone transcription regulator HIRA WD repeat
superfamily
Length = 932
Score = 55.8 bits (133), Expect = 2e-07
Identities = 59/242 (24%), Positives = 100/242 (40%), Gaps = 30/242 (12%)
Query: 438 GHLASISCMQID-QYSTLITGGRDAVLKLWDIDKAMAD-EASNSSEDNDACLYTFDSHVD 495
GH SI + I S + TGG D +++W + + E N +ED L +H
Sbjct: 16 GHRLSIFSIHIHPDGSRIATGGLDGTIRIWSTEAINRENENENENEDLPKQLCCMSTHTG 75
Query: 496 EITAISF--DGDNLVSGSQDRTVRQWDLNSGKCTQTIDISFATGPMRSQRNIPLRNSVLL 553
+T++ F +G L SGS DR V W + + + +F +G ++ R LL
Sbjct: 76 TVTSVRFSPNGQYLASGSDDRVVIIW--HKEEAIPGLGSTFGSGEKHTENWRSYRR--LL 131
Query: 554 TKEPPAIGALQCFDAALATGT-KDGIVRLWDLRSGKVVRMLEGHTDAITSLQFDSVN--L 610
+ +D+ L D + +W+ + + ++ +E H + + FD
Sbjct: 132 GHDNDIQDLCWSYDSQLVVSVGLDSSIIVWNGTTFERLKRIEAHQSHVKGITFDPAGKYF 191
Query: 611 VTGAMDRSIRIWDLRTGILSDVFAYEQPITSLHFDLDKIVISNNEPTVKIYNR----KDG 666
T + DR+I++W +SD F+ E+ IT NN P + R DG
Sbjct: 192 ATESDDRTIKVWR-----VSD-FSIEKTITGPF---------NNSPLSTYFRRPSWSPDG 236
Query: 667 NH 668
H
Sbjct: 237 KH 238
>HsM4507523 [B] KOG0639 Transducin-like enhancer of split protein (contains
WD40 repeats)
Length = 743
Score = 55.8 bits (133), Expect = 2e-07
Identities = 45/174 (25%), Positives = 74/174 (41%), Gaps = 28/174 (16%)
Query: 456 TGGRDAVLKLWDIDKAMADEASNSSEDNDACLYTFDSHVDEITAISFDGDNLVSGSQDRT 515
TGG+ V K+WD+ + A + CL D+++ + DG +L+ G + T
Sbjct: 474 TGGKGCV-KVWDVGQPGAKTPVRQLD----CLNR-DNYIRSCKLLP-DGRSLIVGGEAST 526
Query: 516 VRQWDLNSGKCTQTIDISFATGPMRSQRNIPLRNSVLLTKEPPAIGALQCFDAALATGTK 575
+ WDL + T ++++ L P A C
Sbjct: 527 LSIWDLAA-----------PTPRIKAELTSSAPACYALAVSPDAKVCFSC--------CS 567
Query: 576 DGIVRLWDLRSGKVVRMLEGHTDAITSLQFD--SVNLVTGAMDRSIRIWDLRTG 627
DG + +WDL++ +VR +GHTD + + L TG +D ++R WDLR G
Sbjct: 568 DGNIVVWDLQNQTMVRQFQGHTDGASCIDISDYGTRLWTGGLDNTVRCWDLREG 621
>Hs22043515 [S] KOG0295 WD40 repeat-containing protein
Length = 414
Score = 55.8 bits (133), Expect = 2e-07
Identities = 58/223 (26%), Positives = 95/223 (42%), Gaps = 42/223 (18%)
Query: 419 DHSVKVWDLSKKKQIATLHGHLASIS-CMQIDQYSTLITGGRDAVLKLWDIDKAMADEAS 477
D KV L K + T GH +S C L T D +KLWD+ K
Sbjct: 14 DRLWKVLGLPKCNVLLTGFGHTDWLSDCCFHPSGDKLATSSGDTTVKLWDLCKG------ 67
Query: 478 NSSEDNDACLYTFDSHVDEITAISFD--GDNLVSGSQDRTVRQWDLNSGKCTQT------ 529
C+ TF+ H + + ++ G+ + S S D+T + WD+NS +
Sbjct: 68 -------DCILTFEGHSRAVWSCTWHSCGNFVASSSLDKTSKIWDVNSETVLRAPNLHPK 120
Query: 530 -IDISFATGPMRSQRNIPLRNSVLLTKEPPAIGALQCFDAALATGTKDGIVRLWDLRSGK 588
+D+ F T ++ + N + T++ G +GTK + +G+
Sbjct: 121 KVDLYFCT--VQKEGRDHSTNLNMATEDNEQEGTY--------SGTKPEATK----NNGE 166
Query: 589 VVR---MLEGHTDAITSLQF--DSVNLVTGAMDRSIRIWDLRT 626
R L GHTD++ S++F S L+T + D+++ IWD RT
Sbjct: 167 SERCRCTLYGHTDSVNSIEFFPFSNTLLTSSADKTLSIWDART 209
>Hs20149592 [I] KOG0278 Serine/threonine kinase receptor-associated protein
Length = 350
Score = 55.8 bits (133), Expect = 2e-07
Identities = 57/240 (23%), Positives = 103/240 (42%), Gaps = 37/240 (15%)
Query: 411 TMCSAGSLDHSVKVWDLSKKKQIATL-HGHLA-SISCMQIDQYSTLITGGRDAVLKLWDI 468
T + + D + KVWD ++ TL H H+ ++ Q Y L+TGG+D +L+++D+
Sbjct: 72 TKAATAAADFTAKVWDAVSGDELMTLAHKHIVKTVDFTQDSNY--LLTGGQDKLLRIYDL 129
Query: 469 DKAMADEASNSSEDNDACLYTFDSHVDEI-TAISFDGDNLVSGSQDRTVRQWDLNSGKCT 527
+K A+ S H I A+ D + + D+TVR WD +
Sbjct: 130 NKPEAEPKEIS------------GHTSGIKKALWCSEDKQILSADDKTVRLWDHATMTEV 177
Query: 528 QTIDISFATGPMR-----------SQRNIPLRNSVLL----TKEPPAI---GALQCFDAA 569
++++ + + M R+I ++V L + E PA +L
Sbjct: 178 KSLNFNMSVSSMEYIPEGEILVITYGRSIAFHSAVSLDPIKSFEAPATINSASLHPEKEF 237
Query: 570 LATGTKDGIVRLWDLRSGKVVRMLEGHTDAITSLQF--DSVNLVTGAMDRSIRIWDLRTG 627
L G +D + +D SG+ + +GH I ++F D +G+ D ++R+W G
Sbjct: 238 LVAGGEDFKLYKYDYNSGEELESYKGHFGPIHCVRFSPDGELYASGSEDGTLRLWQTVVG 297
>Hs16445424 [Z] KOG0313 Microtubule binding protein YTM1 (contains WD40
repeats)
Length = 423
Score = 55.8 bits (133), Expect = 2e-07
Identities = 54/224 (24%), Positives = 99/224 (44%), Gaps = 25/224 (11%)
Query: 416 GSLDHSVKVWDLSKKKQIATLHGH---LASISCMQIDQYSTLI-TGGRDAVLKLWDIDKA 471
GS D + ++W L + K I T+ GH + ++ ++ D S L+ + D + LW+
Sbjct: 117 GSYDKTSRIWSL-EGKSIMTIVGHTDVVKDVAWVKKDSLSCLLLSASMDQTILLWEW--- 172
Query: 472 MADEASNSSEDNDACLYTFDSHVDEITAISFDGDN--LVSGSQDRTVRQWDLNSGKCTQT 529
N + L+ H + +I+ DG SGS D+ ++ W
Sbjct: 173 ------NVERNKVKALHCCRGHAGSVDSIAVDGSGTKFCSGSWDKMLKIWSTVPTDEEDE 226
Query: 530 IDISFATGPMRSQRNIPLRNS----VLLTKEPPAIGALQCFDAA-LATGTKDGIVRLWDL 584
++ S P + Q+ L + V L+ A+ ++ DA + + + D +R+WD+
Sbjct: 227 MEES-TNRPRKKQKTEQLGLTRTPIVTLSGHMEAVSSVLWSDAEEICSASWDHTIRVWDV 285
Query: 585 RSGKVVRMLEGHTDAITSLQFDSV--NLVTGAMDRSIRIWDLRT 626
SG + L G+ + + + L +G+ DR IR+WD RT
Sbjct: 286 GSGSLKSTLTGNK-VFNCISYSPLCKRLASGSTDRHIRLWDPRT 328
>CE17294 [S] KOG0271 Notchless-like WD40 repeat-containing protein
Length = 473
Score = 55.8 bits (133), Expect = 2e-07
Identities = 68/322 (21%), Positives = 137/322 (42%), Gaps = 49/322 (15%)
Query: 394 KAHDEDITCLDFDMPFGTMCSAGSLDHSVKVWDLSKKKQIA-TLHGH---LASISCMQID 449
K+H + C+ + P T ++ + + +W+ +QI TL H + S++ +
Sbjct: 144 KSHKSWVLCIAWS-PDATKIASACKNGEICIWNAKTGEQIGKTLKRHKQWITSLAWQPMH 202
Query: 450 QYST---LITGGRDAVLKLWDIDKAMADEASNSSEDNDACLYTFDSHVDEITAISFDGDN 506
+ T L + G+D + +WD + CL H +T + + G+
Sbjct: 203 KDPTCRLLASCGKDGNIFIWDTVQGTVVR----------CL---SGHTASVTCLRWGGEG 249
Query: 507 LV-SGSQDRTVRQWDLNSG-KCTQTIDISFATGPMRSQRNIPLRNSVLLTK----EPPAI 560
L+ SGSQDRTV+ W + G C + + + LR S +P +
Sbjct: 250 LIYSGSQDRTVKMWRADDGVMCRNMTGHAHWINTLALNTDYALRTSCFEPSKRCIKPDTV 309
Query: 561 GALQ-----CFDAA--------LATGTKDGIVRLWDLRSGK-VVRMLEGHTDAITSLQF- 605
Q ++AA L +G+ D + +W+ + K + + GH + + F
Sbjct: 310 EECQKVAQTRYEAALEIAGGERLVSGSDDFTLFMWNPKETKQSINRMTGHMQLVNQVVFS 369
Query: 606 -DSVNLVTGAMDRSIRIWDLRTG-ILSDVFAYEQPITSLHFDLDK--IVISNNEPTVKIY 661
D+ + + + D+S+++W RTG L+ + + P+ + + D +V + + T+K++
Sbjct: 370 PDTRYIASASFDKSVKLWCGRTGKYLASLRGHVGPVYQVAWSADSRLLVSGSADSTLKVF 429
Query: 662 NRKDGNHWFCGEDDPEQGNVDF 683
K + ++ D P G+ F
Sbjct: 430 ELKTKSLYY---DLPGHGDEVF 448
>CE14434 [B] KOG0639 Transducin-like enhancer of split protein (contains
WD40 repeats)
Length = 612
Score = 55.8 bits (133), Expect = 2e-07
Identities = 51/197 (25%), Positives = 84/197 (41%), Gaps = 25/197 (12%)
Query: 430 KKQIATLHGHLASISCMQIDQYSTLITGGRDAVLKLWDIDKAMADEASNSSEDNDACLYT 489
KK++ HG + + + D S + TGG+ V K+WD+ ++ A+ + A L
Sbjct: 314 KKKMELNHGEVVCAATISRDN-SRVYTGGKGCV-KIWDVKESDISGATVVNRPPIASLDC 371
Query: 490 FDSHVDEITAISFDGDNLVSGSQDRTVRQWDLNSGKCTQTIDISFATGPMRSQRNIPLRN 549
+ + DG+ L+ G + TV WDL + T+T+D+ SQ L
Sbjct: 372 LKENYIRSCKLFEDGNTLLIGGEASTVALWDLTTE--TKTLDLE-----TDSQACYAL-- 422
Query: 550 SVLLTKEPPAIGALQCFDAALATGTKDGIVRLWDLRSGKVVRMLEGHTDAITSLQF--DS 607
A+ + L DG + ++D+ + V L GH D + L D
Sbjct: 423 ------------AMSPDEKLLFACLADGNILIYDIHNKVKVGTLPGHQDGASCLDLSKDG 470
Query: 608 VNLVTGAMDRSIRIWDL 624
L +G +D S+R WDL
Sbjct: 471 TKLWSGGLDNSVRCWDL 487
>7290304 [S] KOG0310 Conserved WD40 repeat-containing protein
Length = 535
Score = 55.8 bits (133), Expect = 2e-07
Identities = 61/254 (24%), Positives = 113/254 (44%), Gaps = 48/254 (18%)
Query: 410 GTMCSAGSLDHSVKVWDLSKKKQIATLHGHLASI--SCMQIDQYSTLITGGRDAVLKLWD 467
G + +AG + VK++D + + + GH A + + D+ L + G D ++LWD
Sbjct: 93 GRLLAAGDEEGHVKLFDTTSRNILRLFKGHTAPVHRTFFTADKLQ-LASFGDDKSVRLWD 151
Query: 468 IDKAMADEASNSSEDNDACLYTF-DSHVDEITAISFD---GDNLVSGSQDRTVRQWDLNS 523
+ N+ + T+ D+H D + A + G VSG D ++ +D +
Sbjct: 152 VA-------------NEKVVQTYEDTHTDYVRAGAMHPQAGHMFVSGGYDGKIKLYDTRA 198
Query: 524 GKCTQ-TIDISFATGPMRSQRNIPLRNSVLLTKEPPAIGALQCFDAALATGTKDGIVRLW 582
Q T+D P+ S +P S+ ++ A G++ VR+W
Sbjct: 199 ETAVQRTLDHG---APVESMLFLP-NGSIFVS----------------AGGSQ---VRVW 235
Query: 583 DLRSG-KVVRMLEGHTDAITSLQF--DSVNLVTGAMDRSIRIWDLRTGILSDVFAYEQPI 639
DL SG +++ M+ H +T L+ D L++G +DR ++I+D+ T Y +
Sbjct: 236 DLISGCRLLTMMSQHHKTVTCLRLGSDGRRLLSGGLDRHVKIYDVSTYKTVHTLTYPNAV 295
Query: 640 TSLHF-DLDKIVIS 652
S+ D D+ V++
Sbjct: 296 VSMAVADGDQAVVA 309
>Hs4557467 [KL] KOG4283 Transcription-coupled repair protein CSA contains WD40
domain
Length = 396
Score = 55.5 bits (132), Expect = 3e-07
Identities = 50/213 (23%), Positives = 93/213 (43%), Gaps = 39/213 (18%)
Query: 426 DLSKKKQIATLHGHLASISCMQIDQYST--LITGGRDAVLKLWDIDKAMADE-------A 476
+L+K + + +HG I+ + I+ +++GG D V+ L+D++ +
Sbjct: 31 ELNKDRDVERIHG--GGINTLDIEPVEGRYMLSGGSDGVIVLYDLENSSRQSYYTCKAVC 88
Query: 477 SNSSEDNDACLYTFDSHVDEITAISFDGDNLVSGSQDRTVRQWDLNSGKCTQTIDISFAT 536
S + D Y+ V+ + D S S D+T++ WD N+ QT D+
Sbjct: 89 SIGRDHPDVHRYS----VETVQWYPHDTGMFTSSSFDKTLKVWDTNT---LQTADVFNFE 141
Query: 537 GPMRSQRNIPLRNSVLLTKEPPAIGALQCFDAALATGTKDGIVRLWDLRSGKVVRMLEGH 596
+ S P+ L +A GT+ V+L DL+SG +L+GH
Sbjct: 142 ETVYSHHMSPVSTKHCL----------------VAVGTRGPKVQLCDLKSGSCSHILQGH 185
Query: 597 TDAITSL----QFDSVNLVTGAMDRSIRIWDLR 625
I ++ ++D + L T + D +++WD+R
Sbjct: 186 RQEILAVSWSPRYDYI-LATASADSRVKLWDVR 217
>CE27713 [A] KOG0265 U5 snRNP-specific protein-like factor and related
proteins
Length = 331
Score = 55.5 bits (132), Expect = 3e-07
Identities = 54/218 (24%), Positives = 85/218 (38%), Gaps = 42/218 (19%)
Query: 436 LHGHLASISCMQIDQY-STLITGGRDAVLKLWDIDKAMADEASNSSEDNDACLYTFDSHV 494
L GH I Q S L + G D + LW++ E N + H
Sbjct: 32 LQGHGGEIYTSQFSSDGSFLASAGYDQQIFLWNV----FGECENFA--------VLKGHK 79
Query: 495 DEITAISFDGDN--LVSGSQDRTVRQWDLNSGKC----------TQTIDISFATGP---- 538
I + F+ D+ LVS D+TVR WD+ +G C ++D++ GP
Sbjct: 80 GAIMEVKFNADSSHLVSAGTDKTVRVWDMETGSCIRNFKSHTDIVNSVDVN-RRGPQMIC 138
Query: 539 ---------MRSQRNIPLRNSVLLTKEPPAIGALQCFDAALATGTKDGIVRLWDLRSGKV 589
+ R+ + + A+ D + G D +++WD+ V
Sbjct: 139 SASDDGTVMVHDMRSKEAAKKFICKYQQTAVTFNDAADNVICGGI-DNQIKVWDMLRNDV 197
Query: 590 VRMLEGHTDAITSLQFDSVN--LVTGAMDRSIRIWDLR 625
+L GH D ITSL L++ +MD S+ WD+R
Sbjct: 198 RYVLSGHRDTITSLSVSHNGNFLLSNSMDCSLMSWDIR 235
Score = 52.0 bits (123), Expect = 3e-06
Identities = 56/249 (22%), Positives = 102/249 (40%), Gaps = 39/249 (15%)
Query: 384 DSGSKITSLPKAHDEDITCLDFDMPFGTMCSAGSLDHSVKVWDLSKKKQIATLHGHLASI 443
++GS I + K+H + + +D + M + S D +V V D+ K+
Sbjct: 109 ETGSCIRNF-KSHTDIVNSVDVNRRGPQMICSASDDGTVMVHDMRSKEAAKKFICKYQQT 167
Query: 444 SCMQIDQYSTLITGGRDAVLKLWDIDKAMADEASNSSEDNDACLYTFDSHVDEITA--IS 501
+ D +I GG D +K+WD+ + ND Y H D IT+ +S
Sbjct: 168 AVTFNDAADNVICGGIDNQIKVWDMLR------------NDV-RYVLSGHRDTITSLSVS 214
Query: 502 FDGDNLVSGSQDRTVRQWDLNSGKCTQTIDISFATGPMRSQRNIPLRNSVLLTKEPPAIG 561
+G+ L+S S D ++ WD+ Q + + ++N+
Sbjct: 215 HNGNFLLSNSMDCSLMSWDIRPFVPAQRLVARYQGASHNFEKNL---------------- 258
Query: 562 ALQCF----DAALATGTKDGIVRLWDLRSGKVVRMLEGHTDAI--TSLQFDSVNLVTGAM 615
L+C D + G+ D V +W+ +S V L GH ++ T+L L++
Sbjct: 259 -LKCGWSPRDNYITAGSADRFVYVWNAKSRACVYKLPGHLGSVNCTALHPTQQILLSAGS 317
Query: 616 DRSIRIWDL 624
D++I + +L
Sbjct: 318 DKTIFLGEL 326
>CE14894 [A] KOG0319 WD40-repeat-containing subunit of the 18S rRNA
processing complex
Length = 793
Score = 55.5 bits (132), Expect = 3e-07
Identities = 50/205 (24%), Positives = 82/205 (39%), Gaps = 37/205 (18%)
Query: 424 VWDLSKKKQIATLHGHLASISCMQIDQYSTLI-TGGRDAVLKLWDIDKAMADEASNSSED 482
V L K +T+ H ++C+ I + LI TGG D ++KLW +D + +
Sbjct: 461 VEQLPKLTCSSTMVAHGKDVNCVDISESDALIATGGMDKLVKLWQVD---------THKM 511
Query: 483 NDACLYTFDSHVDEITAISF--DGDNLVSGSQDRTVRQWDLNSGKCTQTID-ISFATGPM 539
T H + + F + L S S D T++ W+++ C QTI S A +
Sbjct: 512 QLGIAGTLSGHRRGVGDVKFAKNSHKLASCSGDMTIKIWNISEKSCLQTISGHSCAVFRV 571
Query: 540 RSQRNIPLRNSVLLTKEPPAIGALQCFDAALATGTKDGIVRLWDLRSGKVVRMLEGHTDA 599
RN D+ L + GI+++W +++ ++ HTD
Sbjct: 572 IFARN----------------------DSQLISADSAGIIKIWTIKTADCECSIDAHTDK 609
Query: 600 ITSL--QFDSVNLVTGAMDRSIRIW 622
I SL + VT D I +W
Sbjct: 610 IWSLSKNHNESEFVTAGTDGRIVVW 634
Score = 52.0 bits (123), Expect = 3e-06
Identities = 65/275 (23%), Positives = 122/275 (43%), Gaps = 39/275 (14%)
Query: 396 HDEDITCLDFDMPFGTMCSAGSLDHSVKVWDLSKKKQIATLHGHLASISCMQIDQYSTLI 455
H I ++F+ G + + GS DH VKVW+L++++ TL G + +S + ++ L+
Sbjct: 108 HTAPILVMEFNEE-GHLLATGSADHIVKVWNLTEQQCTHTLKGP-SVVSAILFGKHEKLV 165
Query: 456 TGGRDAVLKLWDIDKAMADEASNSSEDNDACLYTFDSHVDEITAISFDGDNLVSGSQDRT 515
G + L L++I + + N T+ SH ITA+ D+ V + R
Sbjct: 166 VGYIEGQLNLYNIMRGAPKKLVN----------TWKSHNSHITALLQVPDSRVVVALSR- 214
Query: 516 VRQWDLNSGKCTQTIDISFATGPMRSQRNIPLRNSVLLTKEPPAIGALQCFDAALATGTK 575
QT+ I T + R +PL S+ E AIG + L T +
Sbjct: 215 -----------DQTMSI-HETETQETLRVLPLYESI----EGGAIG----HNGNLFTVGE 254
Query: 576 DGIVRLWDLRSGKVVRMLEGHTDAITSLQFDSVN--LVTGAMDRSIRIWDLRT-GILSDV 632
+G+V+ + + + K+VR + + L +D V+ + + ++++ I D I +
Sbjct: 255 EGVVKEFVIETAKLVRKKRIASSNLDHLAYDVVSNRFLAISAEQNLIILDFENLKIARQI 314
Query: 633 FAYEQPITS---LHFDLDKIVISNNEPTVKIYNRK 664
+ I S L D + +++N +++YN K
Sbjct: 315 VGFHDEIYSCCLLGKDESHMAVASNTSEIRLYNTK 349
>At3g21540 [A] KOG0306 WD40-repeat-containing subunit of the 18S rRNA
processing complex
Length = 949
Score = 55.5 bits (132), Expect = 3e-07
Identities = 43/146 (29%), Positives = 66/146 (44%), Gaps = 17/146 (11%)
Query: 378 TLQQFYDSGSKITSLPKAHDEDITCLDFDMPFGTMCSAGSLDHSVKVWDLSKKKQIATLH 437
T++ FY K H + C+D G + GS D ++K+W L ++
Sbjct: 556 TVKVFYMDSLKFYLSLYGHKLPVMCIDISSD-GELIVTGSQDKNLKIWGLDFGDCHKSIF 614
Query: 438 GHLASISCMQ-IDQYSTLITGGRDAVLKLWDIDKAMADEASNSSEDNDACLYTFDSHVDE 496
H S+ ++ + L + G+D ++K WD DK L T + H E
Sbjct: 615 AHGDSVMGVKFVRNTHYLFSIGKDRLVKYWDADKFEH-------------LLTLEGHHAE 661
Query: 497 I--TAISFDGDNLVSGSQDRTVRQWD 520
I AIS GD LV+GS DR++R+WD
Sbjct: 662 IWCLAISNRGDFLVTGSHDRSMRRWD 687
Score = 54.7 bits (130), Expect = 5e-07
Identities = 31/123 (25%), Positives = 60/123 (48%), Gaps = 16/123 (13%)
Query: 411 TMCSAGSLDHSVKVWDLSKKKQIATLHGHLASISCMQIDQY-STLITGGRDAVLKLWDID 469
++ + G D S+++WD K + H +++ ++ ++ S L +G +D + LWD+
Sbjct: 77 SLVAVGYADGSIRIWDTEKGTCEVNFNSHKGAVTALRYNKVGSMLASGSKDNDIILWDVV 136
Query: 470 KAMADEASNSSEDNDACLYTFDSHVDEITAISF--DGDNLVSGSQDRTVRQWDLNSGKCT 527
++ L+ H D++T + F G LVS S+D+ +R WDL + C
Sbjct: 137 -------------GESGLFRLRGHRDQVTDLVFLDGGKKLVSSSKDKFLRVWDLETQHCM 183
Query: 528 QTI 530
Q +
Sbjct: 184 QIV 186
Score = 52.0 bits (123), Expect = 3e-06
Identities = 36/133 (27%), Positives = 59/133 (44%), Gaps = 24/133 (18%)
Query: 497 ITAISFDGDNLVS-GSQDRTVRQWDLNSGKCTQTIDISFATGPMRSQRNIPLRNSVLLTK 555
+T+I+ +LV+ G D ++R WD G C + N +
Sbjct: 68 VTSIASSASSLVAVGYADGSIRIWDTEKGTC---------------EVNFNSHKGAVTAL 112
Query: 556 EPPAIGALQCFDAALATGTKDGIVRLWDLRSGKVVRMLEGHTDAITSLQF--DSVNLVTG 613
+G++ LA+G+KD + LWD+ + L GH D +T L F LV+
Sbjct: 113 RYNKVGSM------LASGSKDNDIILWDVVGESGLFRLRGHRDQVTDLVFLDGGKKLVSS 166
Query: 614 AMDRSIRIWDLRT 626
+ D+ +R+WDL T
Sbjct: 167 SKDKFLRVWDLET 179
>Hs14150011_2 [R] KOG0274 Cdc4 and related F-box and WD-40 proteins
Length = 342
Score = 55.5 bits (132), Expect = 3e-07
Identities = 62/299 (20%), Positives = 118/299 (38%), Gaps = 51/299 (17%)
Query: 435 TLHGHLASISCMQIDQYSTLI-TGGRDAVLKLWDIDKAMADEASNSSEDNDACLYTFDSH 493
T GH + C+ + L+ +G D +K+WD C T + H
Sbjct: 63 TFVGHQGPVWCLCVYSMGDLLFSGSSDKTIKVWDTCTTYK------------CQKTLEGH 110
Query: 494 VDEITAISFDGDNLVSGSQDRTVRQWDLNSGKCTQTI---DISFATGPMRSQRNIPLRNS 550
+ A+ G L SGS D T+ WD+ + + TI D T + S N+ S
Sbjct: 111 DGIVLALCIQGCKLYSGSADCTIIVWDIQNLQKVNTIRAHDNPVCT--LVSSHNVLFSGS 168
Query: 551 VLLTKEPPAIG-----------------ALQCFDAALATGTKDGIVRLWDLRSGKVVRML 593
+ K +G AL + L +G+ I ++WD+R+ + +L
Sbjct: 169 LKAIKVWDIVGTELKLKKELTGLNHWVRALVAAQSYLYSGSYQTI-KIWDIRTLDCIHVL 227
Query: 594 EGHTDAITSLQFDSVNLVTGAMDRSIRIWDLR--------TGILSDVFAYEQPITSLHFD 645
+ ++ S+ + ++V G + I +WD+ TG + V+A T D
Sbjct: 228 QTSGGSVYSIAVTNHHIVCGTYENLIHVWDIESKEQVRTLTGHVGTVYALAVISTP---D 284
Query: 646 LDKIVISNNEPTVKIYNRKDGNHWFCGED-DPEQGNVDFVRYKHGYLVEGRSNGDINTW 703
K+ ++ + ++++++ ++ C + QG+V + G L G + + W
Sbjct: 285 QTKVFSASYDRSLRVWSM---DNMICTQTLLRHQGSVTALAVSRGRLFSGAVDSTVKVW 340
Score = 52.4 bits (124), Expect = 2e-06
Identities = 28/107 (26%), Positives = 50/107 (46%), Gaps = 16/107 (14%)
Query: 416 GSLDHSVKVWDLSKKKQIATLHGHLASISCMQI---DQYSTLITGGRDAVLKLWDIDKAM 472
G+ ++ + VWD+ K+Q+ TL GH+ ++ + + + + + D L++W
Sbjct: 247 GTYENLIHVWDIESKEQVRTLTGHVGTVYALAVISTPDQTKVFSASYDRSLRVW------ 300
Query: 473 ADEASNSSEDNDACLYTFDSHVDEITAISFDGDNLVSGSQDRTVRQW 519
S DN C T H +TA++ L SG+ D TV+ W
Sbjct: 301 -------SMDNMICTQTLLRHQGSVTALAVSRGRLFSGAVDSTVKVW 340
>Hs21361151 [B] KOG0639 Transducin-like enhancer of split protein (contains
WD40 repeats)
Length = 743
Score = 55.1 bits (131), Expect = 4e-07
Identities = 45/174 (25%), Positives = 74/174 (41%), Gaps = 28/174 (16%)
Query: 456 TGGRDAVLKLWDIDKAMADEASNSSEDNDACLYTFDSHVDEITAISFDGDNLVSGSQDRT 515
TGG+ V K+WD+ + A + CL D+++ + DG +L+ G + T
Sbjct: 474 TGGKGCV-KVWDVGQPGAKTPVAQLD----CLNR-DNYIRSCKLLP-DGRSLIVGGEAST 526
Query: 516 VRQWDLNSGKCTQTIDISFATGPMRSQRNIPLRNSVLLTKEPPAIGALQCFDAALATGTK 575
+ WDL + T ++++ L P A C
Sbjct: 527 LSIWDLAA-----------PTPRIKAELTSSAPACYALAVSPDAKVCFSC--------CS 567
Query: 576 DGIVRLWDLRSGKVVRMLEGHTDAITSLQFD--SVNLVTGAMDRSIRIWDLRTG 627
DG + +WDL++ +VR +GHTD + + L TG +D ++R WDLR G
Sbjct: 568 DGNIVVWDLQNQTMVRQFQGHTDGASCIDISDYGTRLWTGGLDNTVRCWDLREG 621
>Hs17402902 [R] KOG0322 G-protein beta subunit-like protein GNB1L contains WD
repeats
Length = 327
Score = 55.1 bits (131), Expect = 4e-07
Identities = 55/226 (24%), Positives = 94/226 (41%), Gaps = 46/226 (20%)
Query: 415 AGSLDHSVKVWDLSKKKQIATLHGHLAS-ISCMQ-IDQYSTLITGGRDAVLKLWDIDKAM 472
+GS V +W L ++ + TL GH ++ +Q + Q L++ GRD L LWD+ +
Sbjct: 42 SGSQSGLVHIWSLQTRRAVTTLDGHGGQCVTWLQTLPQGRQLLSQGRDLKLCLWDLAEG- 100
Query: 473 ADEASNSSEDNDACLYTFDSHVDEITAISFDGDNLVSGSQDRTVRQWDLN-SGKCTQTID 531
S+ + CL ++ F ++++G Q R W L G+ + +
Sbjct: 101 -----RSAVVDSVCL----------ESVGFCRSSILAGGQPR----WTLAVPGRGSDEVQ 141
Query: 532 ISFATGPMRSQRNIPLRNSV--LLTKEPPAIGALQCFDA---------ALATGTKDGIVR 580
I +P + SV L K +G C L G +DG V
Sbjct: 142 IL----------EMPSKTSVCALKPKADAKLGMPMCLRLWQADCSSRPLLLAGYEDGSVV 191
Query: 581 LWDLRSGKVVRMLEGHTDAITSLQFDSVNL--VTGAMDRSIRIWDL 624
LWD+ KV + H + + L FDS ++G+ +++ +W L
Sbjct: 192 LWDVSEQKVCSRIACHEEPVMDLDFDSQKARGISGSAGKALAVWSL 237
>Hs13376099 [B] KOG0639 Transducin-like enhancer of split protein (contains
WD40 repeats)
Length = 449
Score = 55.1 bits (131), Expect = 4e-07
Identities = 35/98 (35%), Positives = 48/98 (48%), Gaps = 7/98 (7%)
Query: 552 LLTKEPPAIGALQC------FDAALATGT-KDGIVRLWDLRSGKVVRMLEGHTDAITSLQ 604
L KE L C DA LA + G+VR+WDLR VVR L+G+ D + S+
Sbjct: 246 LHVKEQLPCAGLNCQALDANLDANLAFASFTSGVVRIWDLRDQSVVRDLKGYPDGVKSIV 305
Query: 605 FDSVNLVTGAMDRSIRIWDLRTGILSDVFAYEQPITSL 642
N+ TG D +R WD RT + + ++ I SL
Sbjct: 306 VKGYNIWTGGPDACLRCWDQRTIMKPLEYQFKSQIMSL 343
>YPR178w [A] KOG0272 U4/U6 small nuclear ribonucleoprotein Prp4 (contains
WD40 repeats)
Length = 465
Score = 54.7 bits (130), Expect = 5e-07
Identities = 52/224 (23%), Positives = 94/224 (41%), Gaps = 41/224 (18%)
Query: 408 PFGTMCSAGSLDHSVKVWDLSKKKQIATLHGHLASISCMQIDQYSTLI-TGGRDAVLKLW 466
P G + S D + ++WD S +++ GH + + +L+ +GG D++ LW
Sbjct: 275 PSGKFIGSASHDMTWRLWDASTHQELLLQEGHDKGVFSLSFQCDGSLVCSGGMDSLSMLW 334
Query: 467 DIDKAMADEASNSSEDNDACLYTFDSHVDEITAISF--DGDNLVSGSQDRTVRQWDL--- 521
DI + + + T H I +++ +G + +G D + WD+
Sbjct: 335 DI-------------RSGSKVMTLAGHSKPIYTVAWSPNGYQVATGGGDGIINVWDIRKR 381
Query: 522 NSGKCTQTIDISFATGPMRSQRNIPLRNSVLLTKEPPAIGALQCFDAALATGTKDGIVRL 581
+ G+ Q + + RNI V +KE + C D ++ +
Sbjct: 382 DEGQLNQIL----------AHRNIV--TQVRFSKEDGGKKLVSC--------GYDNLINV 421
Query: 582 WDLRSGKVVRMLEGHTDAITSLQF--DSVNLVTGAMDRSIRIWD 623
+ + + L GHTD I SL +S LV+G DRSI++W+
Sbjct: 422 YSSDTWLKMGSLAGHTDKIISLDISNNSHFLVSGGWDRSIKLWN 465
Score = 53.1 bits (126), Expect = 1e-06
Identities = 30/110 (27%), Positives = 55/110 (49%), Gaps = 9/110 (8%)
Query: 562 ALQCFDAALATGTKDGIVRLWDLRSGKVVRMLEGHTDAITSLQF--DSVNLVTGAMDRSI 619
+ QC + + +G D + LWD+RSG V L GH+ I ++ + + + TG D I
Sbjct: 314 SFQCDGSLVCSGGMDSLSMLWDIRSGSKVMTLAGHSKPIYTVAWSPNGYQVATGGGDGII 373
Query: 620 RIWDLR---TGILSDVFAYEQPITSLHFDLD----KIVISNNEPTVKIYN 662
+WD+R G L+ + A+ +T + F + K+V + + +Y+
Sbjct: 374 NVWDIRKRDEGQLNQILAHRNIVTQVRFSKEDGGKKLVSCGYDNLINVYS 423
>ECU11g1750 [K] KOG0263 Transcription initiation factor TFIID subunit TAF5
(also component of histone acetyltransferase SAGA)
Length = 556
Score = 54.7 bits (130), Expect = 5e-07
Identities = 65/278 (23%), Positives = 117/278 (41%), Gaps = 51/278 (18%)
Query: 435 TLHGHLASISCMQIDQYSTLITGG-RDAVLKLWDIDKAMADEASNSSE------------ 481
T+H ++ +I L+ G +D+ ++++ + + +SSE
Sbjct: 248 TIHNTYEGLTAAEISNDLKLMACGFKDSYVEVYSLTNESLKKLKSSSELAKSDIKTLNEE 307
Query: 482 --DNDACLYTFDSHVDEITAISFDGDN--LVSGSQDRTVRQWDLNSGKCTQTI------- 530
+ Y H + + F N LVS SQD TV W L+ C +
Sbjct: 308 KFEEVGSSYKLVGHSGPVYGLKFFSSNKFLVSSSQDCTVCLWSLDL-LCLLAVYKAHAFP 366
Query: 531 ---------DISFATGPMRSQRNIPLRNSVLLTK-EPPAIGALQCFDAA--------LAT 572
D FA+G Q + SV+ +K E I +L A L T
Sbjct: 367 VWCVDVAPNDYFFASGAGDRQAIVW---SVMTSKPERLIISSLSDVTAVKFHPNSSYLFT 423
Query: 573 GTKDGIVRLWDLRSGKVVRMLEGHTDAITSLQFDSVN--LVTGAMDRSIRIWDLRTG-IL 629
G+ D VR+ D+ + VVR+ GHTD +T + L +G+ DR++ +WD+++ +L
Sbjct: 424 GSSDHRVRMHDISTASVVRIFCGHTDTVTCMDVSHCGKFLASGSKDRTVLLWDIQSSKLL 483
Query: 630 SDVFAYEQPITSLHFDLDKIVISN--NEPTVKIYNRKD 665
+E + S+ F V+++ + +V++++R D
Sbjct: 484 GKYVGHENTVFSVSFCFYGSVLASCGADNSVRLWDRTD 521
>ECU08g1250 [U] KOG0276 Vesicle coat complex COPI beta' subunit
Length = 759
Score = 54.7 bits (130), Expect = 5e-07
Identities = 57/229 (24%), Positives = 94/229 (40%), Gaps = 52/229 (22%)
Query: 416 GSLDHSVKVWDLSKKKQIATLHGHLASISCMQID-QYSTLITGGRDAVLKLW----DIDK 470
GS D +V +++L K +++ T H H I ++ Q + +T DA LK+W ++ +
Sbjct: 111 GSDDGNVSIYELGKYRKVKTFHAHDDFIRKIESHPQDPSFLTASDDATLKMWIYQGEVSQ 170
Query: 471 AMA---------------DEASNS------------SEDNDACLYTFDSHVDEITAISFD 503
AM ++AS S + C+ TF H I +I F
Sbjct: 171 AMTYTGHEHFVMDVCFYPNDASKFVSCSLDSTVKVWSVEQPHCVKTFKGHTSGINSICFL 230
Query: 504 G-DNLVSGSQDRTVRQWDLNSGKCTQTID------------ISFA-------TGPMRSQR 543
G D LVSG+ D T++ WD + +C T+ SF+ G MR
Sbjct: 231 GRDCLVSGADDLTLKVWDFQTAQCITTLSGHTNNINKVYPLNSFSLFASCGEDGSMRLWN 290
Query: 544 NIPLRNSVLLTKEPPAIGALQCFDAALATGTKDGIVRLWDLRSGKVVRM 592
N + LL + I ++ D + G+ + IV + + +VRM
Sbjct: 291 NKTFKQEDLLILQGGRIWDVKEKDGKILVGSDEEIVFINACQGSPLVRM 339
>CE11196 [Z] KOG0313 Microtubule binding protein YTM1 (contains WD40
repeats)
Length = 439
Score = 54.7 bits (130), Expect = 5e-07
Identities = 57/252 (22%), Positives = 107/252 (41%), Gaps = 48/252 (19%)
Query: 436 LHGHLASISCMQIDQYST-LITGGRDAVLKLWDIDKAMADEASNSSEDNDAC-------- 486
L GH ++ C+ ++ ST I+G D LK+W++D + E+ ++
Sbjct: 207 LRGHERAVECVSVNSDSTRAISGSVDTNLKIWNLDASDEATTYEKEEEEESAKKRRKKET 266
Query: 487 -----LYTFDSHVDEITAISF---DGDNLVSGSQDRTVRQWDLNSGKCTQTIDISFATGP 538
+ T H D+++A+ + + + S S D T+ +WDL +IS GP
Sbjct: 267 KTKVPMVTIGGHRDKVSAVEWCPWNSGHAFSCSWDHTIVEWDLELAG-----EISRIKGP 321
Query: 539 MRSQRNIPLRNSVLLTKEPPAIGALQCFDAALATGTKDGIVRLWDL--RSGKVVRML--- 593
+S +I L L L + D I RL+D R G +V+
Sbjct: 322 -KSFTSIDLHPKSDL----------------LISSCTDAIPRLYDPKNRDGSMVKQSFIG 364
Query: 594 --EGHTDAITSLQFDSVNLVTGAMDRSIRIWDLRT--GILSDVFAYEQPITSLHFDLDKI 649
G +A+ D+ V+ + D++ ++WD+R+ L D+ ++ I ++ I
Sbjct: 365 HQNGWVEAVKWNPLDTNQFVSVSTDKTAKMWDVRSSKSSLFDIHGHDDRILCATWNEGLI 424
Query: 650 VISNNEPTVKIY 661
+ + T+KI+
Sbjct: 425 ATGSADCTIKIF 436
>At4g05410 [A] KOG0299 U3 snoRNP-associated protein (contains WD40 repeats)
Length = 504
Score = 54.7 bits (130), Expect = 5e-07
Identities = 34/129 (26%), Positives = 65/129 (50%), Gaps = 6/129 (4%)
Query: 499 AISFDGDNLVSGSQDRTVRQWDLNSGKCTQTIDISFATGPMRSQRNIPLRNSVLLTKEPP 558
A+S D S S+D T+ WD++SGK + I + + + + LR
Sbjct: 168 ALSDDDSRGFSASKDGTIMHWDVSSGKTDKYI---WPSDEILKSHGMKLREPRNKNHSRE 224
Query: 559 AIGALQCFDAA-LATGTKDGIVRLWDLRSGKVVRMLEGHTDAITSL--QFDSVNLVTGAM 615
++ D LATG D V +WD+R+ + V+ GH + ++ L ++ + L +G+
Sbjct: 225 SLALAVSSDGRYLATGGVDRHVHIWDVRTREHVQAFPGHRNTVSCLCFRYGTSELYSGSF 284
Query: 616 DRSIRIWDL 624
DR++++W++
Sbjct: 285 DRTVKVWNV 293
Score = 50.4 bits (119), Expect = 9e-06
Identities = 52/219 (23%), Positives = 87/219 (38%), Gaps = 24/219 (10%)
Query: 396 HDEDITCLDFDMPFGTMCSAGSLDHSVKVWDLSKKKQIATLHGHLASISCMQIDQYSTLI 455
H ++CL F + S GS D +VKVW++ K I HGH I + + +
Sbjct: 263 HRNTVSCLCFRYGTSELYS-GSFDRTVKVWNVEDKAFITENHGHQGEILAIDALRKERAL 321
Query: 456 TGGRDAVLKLWDIDKAMADEASNSSEDNDACLYTFDSHVDEITAISFDGDNLVSGSQDRT 515
T GRD + + ++ + ++C + D + +SGS + T
Sbjct: 322 TVGRDRTMLYHKVPESTRMIYRAPASSLESCCFISD-------------NEYLSGSDNGT 368
Query: 516 VRQWDLNSGK-------CTQTIDISFAT-GPMRSQRNIPLRNSVLLTKEPPAIGALQCFD 567
V W + K Q I T G + + + P+ N+ A+ + D
Sbjct: 369 VALWGMLKKKPVFVFKNAHQDIPDGITTNGILENGDHEPVNNNCSANSWVNAVATSRGSD 428
Query: 568 AALATGTKDGIVRLWDLRSGKVVRMLE-GHTDAITSLQF 605
A A+G +G VRLW + + + + E T + SL F
Sbjct: 429 LA-ASGAGNGFVRLWAVETNAIRPLYELPLTGFVNSLAF 466
>7293146 [R] KOG0286 G-protein beta subunit
Length = 340
Score = 54.7 bits (130), Expect = 5e-07
Identities = 52/185 (28%), Positives = 80/185 (43%), Gaps = 29/185 (15%)
Query: 489 TFDSHVDEITAISFDGD--NLVSGSQDRTVRQWDLNSGKCTQTIDI------SFATGP-- 538
T H+ +I A+ + D NLVS SQD + WD ++ I + + A P
Sbjct: 50 TLRGHLAKIYAMHWGNDSRNLVSASQDGKLIVWDSHTTNKVHAIPLRSSWVMTCAYAPSG 109
Query: 539 ----------MRSQRNIPLRN-SVLLTKEPPAIGA-LQCF----DAALATGTKDGIVRLW 582
M S N+ R +V +++E P G L C D + T + D LW
Sbjct: 110 SYVACGGLDNMCSIYNLKTREGNVRVSRELPGHGGYLSCCRFLDDNQIVTSSGDMSCGLW 169
Query: 583 DLRSGKVVRMLEGHTDAITSLQF--DSVNLVTGAMDRSIRIWDLRTGILSDVF-AYEQPI 639
D+ +G V GHT + +L V+GA D S ++WD+R G+ F +E I
Sbjct: 170 DIETGLQVTSFLGHTGDVMALSLAPQCKTFVSGACDASAKLWDIREGVCKQTFPGHESDI 229
Query: 640 TSLHF 644
++ F
Sbjct: 230 NAVTF 234
>SPCC16A11.02 [A] KOG0319 WD40-repeat-containing subunit of the 18S rRNA
processing complex
Length = 181
Score = 54.3 bits (129), Expect = 6e-07
Identities = 38/147 (25%), Positives = 69/147 (46%), Gaps = 19/147 (12%)
Query: 384 DSGSKITSLPKAHDEDITCLDFDMPFGTMCSAGSLDHSVKVWDLSKKKQIATLHGHLASI 443
++G ++ S+ K D+ +T L + +A + ++++ ++I ++ H +
Sbjct: 48 ETGERLFSIKKDEDDYVTALAITSDSKKLIAAFR-SRLLTIYEIPSGRRIKSMKAHETPV 106
Query: 444 SCMQIDQYSTLI-TGGRDAVLKLWDIDKAMADEASNSSEDNDACLYTFDSHVDEITAISF 502
M ID +TL+ TGG + ++K+WDI A ++F H I+A+ F
Sbjct: 107 ITMTIDPTNTLLATGGAEGLVKVWDIAGAYVT-------------HSFRGHGGVISALCF 153
Query: 503 DGDN----LVSGSQDRTVRQWDLNSGK 525
L SG+ D VR WDLNS +
Sbjct: 154 GKHQNTWVLASGADDSRVRLWDLNSSR 180
>At1g15470 [I] KOG0278 Serine/threonine kinase receptor-associated protein
Length = 333
Score = 54.3 bits (129), Expect = 6e-07
Identities = 59/282 (20%), Positives = 110/282 (38%), Gaps = 45/282 (15%)
Query: 433 IATLHGHLASISCMQIDQYST-LITGGRDAVLKLWDIDKAMADEASNSSEDNDACLYTFD 491
I T GH ++ +D+ + + D K+W+ A+ + +S E
Sbjct: 49 IGTFEGHKGAVWSCSLDKNAIRAASASADFTAKIWN---ALTGDELHSFEHK-------- 97
Query: 492 SHVDEITAISFDGDNLVSGSQDRTVRQWDLNSGKCTQTIDISFATGPMRSQRNIPLRNSV 551
H+ A S D L++G ++ +R +DLN ++ + G +R+ + N++
Sbjct: 98 -HIVRACAFSEDTHRLLTGGMEKILRIFDLNRPDAPPK-EVGNSPGSIRTVEWLHSDNTI 155
Query: 552 LLTKEPPAIGALQCFDAALATGTKDGIVRLWDLRSGKVVRMLEGHTDAITSLQFDSVNLV 611
L ++ T G +RLWD+RS K+V LE + ++ +
Sbjct: 156 L------------------SSCTDTGDIRLWDIRSDKIVHTLETKSPVTSAEVSQDGRYI 197
Query: 612 TGAMDRSIRIWDLRT-GILSDVFAYEQPITSLHFDLD-----KIVISNNEPTVKIYNRKD 665
T A S++ WD + G+L +Y+ P L+ + + V ++ +
Sbjct: 198 TTADGSSVKFWDAKNFGLLK---SYDMPCNVESASLEPKHGNTFIAGGEDMWVHRFDFQT 254
Query: 666 GNHWFCGEDDPEQGNVDFVRYKHG--YLVEGRSNGDINTWAI 705
G C + G V VRY G G +G + W +
Sbjct: 255 GEEIGCNKG--HHGPVHCVRYAPGGESYTSGSEDGTVRIWVV 294
>7302082 [A] KOG0640 mRNA cleavage stimulating factor complex; subunit 1
Length = 424
Score = 54.3 bits (129), Expect = 6e-07
Identities = 60/242 (24%), Positives = 108/242 (43%), Gaps = 54/242 (22%)
Query: 410 GTMCSAGSLDHSVKVWDLSK-------------KKQ-----IATLHGHLASISCMQI-DQ 450
G++ + GS+D S+K+ D+ + ++Q I TL+ H +S ++ +
Sbjct: 118 GSLVATGSVDASIKILDVERMLAKSAPEDIEPGREQQGHPVIRTLYDHTDEVSYLEFHPK 177
Query: 451 YSTLITGGRDAVLKLWDIDKAMADEASNSSEDNDACLYTFDSHVDEITAISF--DGDNLV 508
L + RD +KL+DI K +A D + + +SF GD +
Sbjct: 178 EHILASASRDGTVKLFDIAKPSVKKAHKVFTD-----------CEPVLCLSFHPTGDYVA 226
Query: 509 SGSQDRTVRQWDLNSGKCTQTIDISFATGPMRSQRNIPLRNSVLLTKEPPAIGALQCFDA 568
G++ +R +D+ + +C + SQ++ + V K P G L
Sbjct: 227 IGTEHNVLRVYDVATTQC--------FVSAIPSQQH---KAGVTCVKYSPT-GKL----- 269
Query: 569 ALATGTKDGIVRLWDLRSGKVVRML-EGHTD-AITSLQF--DSVNLVTGAMDRSIRIWDL 624
ATG+ DG +++WD SG+ + + E H AI SL+F + L++ MD + +W+L
Sbjct: 270 -YATGSYDGDIKIWDGISGRCINTIAEAHGGAAICSLEFTRNGKYLLSSGMDSLVYLWEL 328
Query: 625 RT 626
T
Sbjct: 329 CT 330
>SPBC713.05 [S] KOG0316 Conserved WD40 repeat-containing protein
Length = 297
Score = 53.9 bits (128), Expect = 8e-07
Identities = 61/275 (22%), Positives = 114/275 (41%), Gaps = 44/275 (16%)
Query: 396 HDEDITCLDFDMPFGTMCSAGSLDHSVKVWDLSKKKQIATLHGHLASISCMQIDQYSTLI 455
H +I LD S G D ++VWD++ K L GHLA I+ ++ ++ S+++
Sbjct: 55 HGHEILDLDLVYDSTKFASCGG-DKFIQVWDVNTGKVDRRLGGHLAQINTIRYNEDSSIL 113
Query: 456 TGGR-DAVLKLWDIDKAMADEASNSSEDNDACLYTFDSHVDEITAISFDGDNLVSGSQDR 514
G D+ ++LWD SNS + D +++I +V+GS D
Sbjct: 114 ASGSFDSKVRLWDC-------RSNSFSP----IQVLADAKDSVSSIDIAEHLIVTGSTDG 162
Query: 515 TVRQWDLNSGKCTQTIDISFATGPMRSQRNIPLRNSVLLTKEPPAIGALQCFDAALATGT 574
T+R +D+ G T+ + + P+ S + T + + + +++
Sbjct: 163 TLRTYDIRKG----TLSSDYFSHPITSVK----------TSKSASFSLISSLNSS----- 203
Query: 575 KDGIVRLWDLRSGKVVRMLEGHTD----AITSLQFDSVNLVTGAMDRSIRIWDL--RTGI 628
+ L D +GK+++ G + +S + +G+ D + +WDL T I
Sbjct: 204 ----IHLLDQETGKILKSYIGLKNMEYRVRSSFNQSETIVFSGSEDGKVYLWDLENETQI 259
Query: 629 LSDVFAYEQPIT--SLHFDLDKIVISNNEPTVKIY 661
S +T S H +D +I+ + IY
Sbjct: 260 TSTSVVGTPIVTDISCHPTMDDFIIATVHGDLFIY 294
>SPBC428.19c [S] KOG0310 Conserved WD40 repeat-containing protein
Length = 494
Score = 53.9 bits (128), Expect = 8e-07
Identities = 58/237 (24%), Positives = 98/237 (40%), Gaps = 33/237 (13%)
Query: 379 LQQFYDSGSK-ITSLPKAHDEDITCLDFDMPFGTMCSAGSLDHSVKVWDLSKKKQIATLH 437
L Q +D ++ I AH + F T +GS D +VKVWDLS L
Sbjct: 104 LVQIFDLSTRSILRALDAHQFPVHVTQFCPYANTTFLSGSDDKTVKVWDLSTGAVQYDLS 163
Query: 438 GHLASISCMQIDQYSTLITGGRDAVLKLWDIDKAMADEASNSSEDNDACLYTFDSHVDEI 497
GH + + L++GG D ++LWD A D + ++ +D +
Sbjct: 164 GHEDYVRTASWMSATRLVSGGYDGTIRLWDTRIA----------DPEVMSFSHGEAIDVV 213
Query: 498 TAISFDGDNLVSGSQDRTVRQWDLNSGKCTQTIDISFATGPMRSQRNIPLRNSVLLTKEP 557
+ G ++S +++ WDL +G+ T T +S Q++I
Sbjct: 214 LPMQ-SGSTVISAG-GPSIKVWDLVAGRQTPTKKLS------NHQKSITCL--------- 256
Query: 558 PAIGALQCFDAALATGTKDGIVRLWDLRSGKVVRMLEGHTDAIT-SLQFDSVNLVTG 613
A+ + L +G DG V+++++ KVV ++ ++ L DS NLV G
Sbjct: 257 ----AMNSENTRLLSGGLDGHVKIYNISDWKVVHGMKYSGPILSMGLSPDSCNLVVG 309
>Hs8923881 [R] KOG0266 WD40 repeat-containing protein
Length = 404
Score = 53.9 bits (128), Expect = 8e-07
Identities = 26/76 (34%), Positives = 45/76 (59%), Gaps = 5/76 (6%)
Query: 552 LLTKEPPAIGALQCFDAALATGTKDGIVRLWDLRSGKVVRMLEGHTDAITSLQF---DSV 608
L + P + + C LATG DG +++W++++G ++ L GH D + L F S+
Sbjct: 110 LWARHHPQVPDVSCL--VLATGLNDGQIKIWEVQTGLLLLNLSGHQDVVRDLSFTPSGSL 167
Query: 609 NLVTGAMDRSIRIWDL 624
LV+ + D+++RIWDL
Sbjct: 168 ILVSASRDKTLRIWDL 183
>Hs8923577 [S] KOG0294 WD40 repeat-containing protein
Length = 391
Score = 53.9 bits (128), Expect = 8e-07
Identities = 47/233 (20%), Positives = 95/233 (40%), Gaps = 36/233 (15%)
Query: 416 GSLDHSVKVWDLSKKKQIATLHGHLASISCMQIDQYSTLITGGRDAVLKLWDIDKAMADE 475
GS D ++ ++D+ KK + L H +I+C++ LI+G D ++ +WD K
Sbjct: 58 GSKDETIHIYDMKKKIEHGALVHHSGTITCLKFYGNRHLISGAEDGLICIWDAKKW---- 113
Query: 476 ASNSSEDNDACLYTFDSHVDEITAISF--DGDNLVSGSQDRTVRQWDLNSGKCTQTIDIS 533
CL + +H ++T +S G +S D+T+R W+L G+ +I
Sbjct: 114 ---------ECLKSIKAHKGQVTFLSIHPSGKLALSVGTDKTLRTWNLVEGRSAFIKNIK 164
Query: 534 -----FATGPMRSQRNIPLRNSV------------LLTKEPPAIGALQCFDAALATGTKD 576
P Q + ++N + +T E ++ LA +
Sbjct: 165 QNAHIVEWSPRGEQYVVIIQNKIDIYQLDTASISGTITNEKRISSVKFLSESVLAVAGDE 224
Query: 577 GIVRLWDLRSGKVVRMLEGHTDAITSLQFDSVN----LVTGAMDRSIRIWDLR 625
++R +D S + + H + + + + +V+ + D I++W L+
Sbjct: 225 EVIRFFDCDSLVCLCEFKAHENRVKDMFSFEIPEHHVIVSASSDGFIKMWKLK 277
>Hs4757880 [D] KOG1036 Mitotic spindle checkpoint protein BUB3 WD repeat
superfamily
Length = 328
Score = 53.9 bits (128), Expect = 8e-07
Identities = 64/278 (23%), Positives = 108/278 (38%), Gaps = 29/278 (10%)
Query: 375 TYPTLQQFYDSGSKITSLPKAHDEDITCLDFDMPFGTMCSAGSLDHSVKVWDLSKKKQIA 434
++ T + YD + L H + F P T +G LDH +K+ DL+ ++
Sbjct: 34 SWDTSVRLYDVPANSMRLKYQHTGAVLDCAFYDP--THAWSGGLDHQLKMHDLNTDQE-- 89
Query: 435 TLHG-HLASISCMQI-DQYSTLITGGRDAVLKLWDIDKAMADEASNSSEDNDACLYTFDS 492
L G H A I C++ + + ++TG D +KLWD C S
Sbjct: 90 NLVGTHDAPIRCVEYCPEVNVMVTGSWDQTVKLWD--------------PRTPCNAGTFS 135
Query: 493 HVDEITAISFDGDNLVSGSQDRTVRQWDLNSGKCTQTIDISFATGPMRSQRNIPLRNSVL 552
+++ +S GD L+ G+ R V WDL + Q S R R P + +
Sbjct: 136 QPEKVYTLSVSGDRLIVGTAGRRVLVWDLRNMGYVQQRRESSLKYQTRCIRAFPNKQGYV 195
Query: 553 LTKEPPAIGALQCFDAALATGTKDGIVRLWDLRSGKVVRMLEGHTDAITSLQFDSVN--L 610
L+ + A++ D + K + L+ + ++ + ++ F +++
Sbjct: 196 LSSIEGRV-AVEYLDPSPEVQKKKYAFKCHRLKENNIEQIY-----PVNAISFHNIHNTF 249
Query: 611 VTGAMDRSIRIWD-LRTGILSDVFAYEQPITSLHFDLD 647
TG D + IWD L Y I SL F D
Sbjct: 250 ATGGSDGFVNIWDPFNKKRLCQFHRYPTSIASLAFSND 287
>Hs20556143 [S] KOG0294 WD40 repeat-containing protein
Length = 392
Score = 53.9 bits (128), Expect = 8e-07
Identities = 47/233 (20%), Positives = 95/233 (40%), Gaps = 36/233 (15%)
Query: 416 GSLDHSVKVWDLSKKKQIATLHGHLASISCMQIDQYSTLITGGRDAVLKLWDIDKAMADE 475
GS D ++ ++D+ KK + L H +I+C++ LI+G D ++ +WD K
Sbjct: 58 GSKDETIHIYDMKKKIEHGALVHHSGTITCLKFYGNRHLISGAEDGLICIWDAKKW---- 113
Query: 476 ASNSSEDNDACLYTFDSHVDEITAISF--DGDNLVSGSQDRTVRQWDLNSGKCTQTIDIS 533
CL + +H ++T +S G +S D+T+R W+L G+ +I
Sbjct: 114 ---------ECLKSIKAHKGQVTFLSIHPSGKLALSVGTDKTLRTWNLVEGRSAFIKNIK 164
Query: 534 -----FATGPMRSQRNIPLRNSV------------LLTKEPPAIGALQCFDAALATGTKD 576
P Q + ++N + +T E ++ LA +
Sbjct: 165 QNAHIVEWSPRGEQYVVIIQNKIDIYQLDTASISGTITNEKRISSVKFLSESVLAVAGDE 224
Query: 577 GIVRLWDLRSGKVVRMLEGHTDAITSLQFDSVN----LVTGAMDRSIRIWDLR 625
++R +D S + + H + + + + +V+ + D I++W L+
Sbjct: 225 EVIRFFDCDSLVCLCEFKAHENRVKDMFSFEIPEHHVIVSASSDGFIKMWKLK 277
>At2g05720 [A] KOG0272 U4/U6 small nuclear ribonucleoprotein Prp4 (contains
WD40 repeats)
Length = 276
Score = 53.9 bits (128), Expect = 8e-07
Identities = 46/203 (22%), Positives = 88/203 (42%), Gaps = 21/203 (10%)
Query: 454 LITGGRDAVLKLWDIDKAMADEASNSSEDNDACLYTFDSHVDEITAISFDGDNLVSGSQD 513
L+T V KLW++ + + L HV ++ S D + L + S D
Sbjct: 78 LVTCSLSGVPKLWEVPQVT---------NKIVVLKGHKEHVTDVVFSSVDDECLATASTD 128
Query: 514 RTVRQWD-----LNSGKCTQTIDISFATGPMRSQRNIPLRNSVLLTKEPPAIGALQCFDA 568
RT + W L + K + D +R+ RNI + + K+ ++
Sbjct: 129 RTEKIWKTDGTLLQTFKASSGFDSLARVWDLRTARNILIFQGHI--KQVLSVD-FSPNGY 185
Query: 569 ALATGTKDGIVRLWDLRSGKVVRMLEGHTDAITSLQFDSVN---LVTGAMDRSIRIWDLR 625
LA+G +D R+WDLR K++ ++ H + ++ ++++ L T + D ++ IW R
Sbjct: 186 HLASGGEDNQCRIWDLRMRKLLYIIPAHVNLVSQVKYEPQERYFLATASHDMNVNIWSGR 245
Query: 626 T-GILSDVFAYEQPITSLHFDLD 647
++ + +E + SL +D
Sbjct: 246 DFSLVKSLVGHESKVASLDIAVD 268
>YMR116c [T] KOG0279 G protein beta subunit-like protein
Length = 319
Score = 53.5 bits (127), Expect = 1e-06
Identities = 49/205 (23%), Positives = 83/205 (39%), Gaps = 45/205 (21%)
Query: 410 GTMCSAGSLDHSVKVWDLSKKKQIATLHGHLASISCMQID-QYSTLITGGRDAVLKLWDI 468
G + S D ++++WD++ + GH + + + ID + S +I+G RD +K+W I
Sbjct: 77 GAYALSASWDKTLRLWDVATGETYQRFVGHKSDVMSVDIDKKASMIISGSRDKTIKVWTI 136
Query: 469 DKAMADEASNSSEDNDACLYTFDSHVDEITAISF--------DGDNLVSGSQDRTVRQWD 520
CL T H D ++ + D ++S D+ V+ W+
Sbjct: 137 --------------KGQCLATLLGHNDWVSQVRVVPNEKADDDSVTIISAGNDKMVKAWN 182
Query: 521 LNSGKCTQTIDISFATGPMRSQRNIPLRNSVLLTKEPPAIGALQCFDAALATGTKDGIVR 580
LN + I+ F NS + T G L +A+ KDG +
Sbjct: 183 LNQFQ----IEADFIG-----------HNSNINTLTASPDGTL------IASAGKDGEIM 221
Query: 581 LWDLRSGKVVRMLEGHTDAITSLQF 605
LW+L + K + L D + SL F
Sbjct: 222 LWNLAAKKAMYTLSAQ-DEVFSLAF 245
>YLR222c [A] KOG0319 WD40-repeat-containing subunit of the 18S rRNA
processing complex
Length = 817
Score = 53.5 bits (127), Expect = 1e-06
Identities = 55/264 (20%), Positives = 112/264 (41%), Gaps = 39/264 (14%)
Query: 394 KAHDEDITCLDFDMPFGTMCSAGSLDHSVKVWDLSKKKQIATLH----GHLASISCMQID 449
+ H++ + LD G + S D++ VW ++ ++ GH A+++ + +
Sbjct: 385 EGHEDLLNSLDATED-GLWIATASKDNTAIVWRYNENSCKFDIYAKYIGHSAAVTAVGLP 443
Query: 450 QYST------LITGGRDAVLKLWDIDKAMADEASNSSEDNDACLYTFDSHVDEITAISFD 503
+ L+T D +K W I K A + ++ YT +H +I A+S
Sbjct: 444 NIVSKGYPEFLLTASNDLTIKKWIIPKPTASMDVQIIKVSE---YTRHAHEKDINALSVS 500
Query: 504 GDNLV--SGSQDRTVRQWDLNSGKCTQTI--------DISFAT-----GPMRSQRNIPLR 548
++ + + S D+T + W+L +G+ T+ D+SF + + +
Sbjct: 501 PNDSIFATASYDKTCKIWNLENGELEATLANHKRGLWDVSFCQYDKLLATSSGDKTVKIW 560
Query: 549 N----SVLLTKEPPAIGALQCF----DAALATGTKDGIVRLWDLRSGKVVRMLEGHTDAI 600
+ SV+ T E +C L + DG++++WD SG+ ++ L+GH + +
Sbjct: 561 SLDTFSVMKTLEGHTNAVQRCSFINKQKQLISCGADGLIKIWDCSSGECLKTLDGHNNRL 620
Query: 601 TSLQF--DSVNLVTGAMDRSIRIW 622
+L D +V+ D + W
Sbjct: 621 WALSTMNDGDMIVSADADGVFQFW 644
>Hs4759276 [A] KOG0299 U3 snoRNP-associated protein (contains WD40 repeats)
Length = 475
Score = 53.5 bits (127), Expect = 1e-06
Identities = 52/200 (26%), Positives = 89/200 (44%), Gaps = 37/200 (18%)
Query: 417 SLDHSVKVWDLSKKKQIATLHGHLASISCMQ-IDQYSTLITGGRDAVLKLWDIDKAMADE 475
S D SVKVW++++ + TL GH +++ + + + + GGRD +++W I
Sbjct: 260 SHDRSVKVWNVAENSYVETLFGHQDAVAALDALSRECCVTAGGRDGTVRVWKI------- 312
Query: 476 ASNSSEDNDACLYTFDSHVDEITAISFDGDNLVSGSQDRTVRQWDLNSGKCTQTIDISFA 535
E++ Y +D I I + +++VSG+ D +V W L+ +
Sbjct: 313 ----PEESQLVFYGHQGSIDCIHLI--NEEHMVSGADDGSVALWGLSKKR---------- 356
Query: 536 TGPMRSQRNIPLRNSVLLTKEP---PAIGALQCFDAALATGTKDGIVRLWDLRSGKVVRM 592
P+ QR ++P ++ AL D +ATG+ VRLW + G+ R
Sbjct: 357 --PLALQREAHGLRGEPGLEQPFWISSVAALLNTD-LVATGSHSSCVRLW--QCGEGFRQ 411
Query: 593 LEGHTDA-----ITSLQFDS 607
L+ D I SL+F S
Sbjct: 412 LDLLCDIPLVGFINSLKFSS 431
>Hs4506439 [B] KOG0264 Nucleosome remodeling factor subunit CAF1/NURF55/MSI1
Length = 425
Score = 53.5 bits (127), Expect = 1e-06
Identities = 38/150 (25%), Positives = 72/150 (47%), Gaps = 11/150 (7%)
Query: 383 YDSGSKITSLPK----AHDEDITCLDFDMPFGTMCSAGSLDHSVKVWDL-SKKKQIATLH 437
+D+ S TS P AH ++ CL F+ + + GS D +V +WDL + K ++ T
Sbjct: 254 WDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHTFE 313
Query: 438 GHLASISCMQIDQY--STLITGGRDAVLKLWDIDKAMADEASNSSEDN-DACLYTFDSHV 494
H I + + + L + G D L +WD+ K ++++ +ED L+ H
Sbjct: 314 SHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKIGEEQSAEDAEDGPPELLFIHGGHT 373
Query: 495 DEITAISFDGDN---LVSGSQDRTVRQWDL 521
+I+ S++ + + S S+D ++ W +
Sbjct: 374 AKISDFSWNPNEPWVICSVSEDNIMQIWQM 403
>Hs22048320 [B] KOG0264 Nucleosome remodeling factor subunit CAF1/NURF55/MSI1
Length = 345
Score = 53.5 bits (127), Expect = 1e-06
Identities = 40/150 (26%), Positives = 70/150 (46%), Gaps = 12/150 (8%)
Query: 383 YDSGSKITSLPK----AHDEDITCLDFDMPFGTMCSA-GSLDHSVKVWDLSKKK-QIATL 436
+D+ SK TS P A+ ++ CL F+ P+G A GS D +V +WDL K ++ +
Sbjct: 169 WDTRSKNTSKPSHSVDAYTAEVNCLSFN-PYGEFILATGSADKTVALWDLRNLKLKVHSF 227
Query: 437 HGHLASISCMQIDQYSTLI--TGGRDAVLKLWDIDKAMADEASNSSEDNDACLYTFDSHV 494
H I +Q ++ I + G D L +WD+ K +++ +ED L+ H
Sbjct: 228 ESHKDEIFQVQWSPHNETILASSGTDHGLNVWDLSKITEEQSPEDAEDRPPELFIHGGHT 287
Query: 495 DEITAISFDGDN---LVSGSQDRTVRQWDL 521
+I S + + S S++ + W +
Sbjct: 288 AKIPDFSLNPSEPWMICSVSENNIMEVWQM 317
>CE02005 [R] KOG0288 WD40 repeat protein TipD
Length = 464
Score = 53.5 bits (127), Expect = 1e-06
Identities = 53/239 (22%), Positives = 98/239 (40%), Gaps = 45/239 (18%)
Query: 403 LDFDMPFGTMCSAGSLDHSVKVWDLSKKKQIATLHGHLASISCMQIDQYSTLITGGRDAV 462
LD+D +C A S D + ++W++ ++ ++T GH +S ++ Q +I+G D
Sbjct: 226 LDYDSQ-RHVCLASSNDKTCRLWNIDSQRLLSTFSGHTDKVSSARLFQSHNVISGSADRT 284
Query: 463 LKLWDIDKAMADEASNSSEDNDACLYTFDSHVDEITA-ISFDGDNLVSGSQDRTVRQWDL 521
+K WDI ++ Y S V +I A + +S D+ VR WD
Sbjct: 285 IKNWDISSIRCLKS-----------YLVGSTVFDIVAKCGVSQSSFISSHFDKKVRFWDA 333
Query: 522 NSGKCTQTIDISFATGPMRSQRNIPLRNSVLLTKEPPAIGALQCFDAALATGTKDGIVRL 581
S T ++++ G S +I + +L ++D + L
Sbjct: 334 RSSDATYSVEL----GQKVSSLDISMDGLQVL------------------ASSRDDTLSL 371
Query: 582 WDLRSGKVVRMLEGH--------TDAITSLQFDSVNLVTGAMDRSIRIWDLRTGILSDV 632
D+R+ ++ + T AI S + V + G+ + S+ IW+ +T L V
Sbjct: 372 IDVRNYGIIHLYSAEQYKTSCDSTRAIFSSTGEYV--LAGSSNSSVFIWNTKTTKLEKV 428
>At5g25150 [K] KOG0263 Transcription initiation factor TFIID subunit TAF5
(also component of histone acetyltransferase SAGA)
Length = 700
Score = 53.5 bits (127), Expect = 1e-06
Identities = 45/227 (19%), Positives = 84/227 (36%), Gaps = 37/227 (16%)
Query: 380 QQFYDSGSKITSLPKAHDEDITCLDFDMPFGTMCSAGSLDHSVKVWDLSKKKQIATLHGH 439
Q +G + +L H + F P G + S D ++++W + GH
Sbjct: 401 QSIGPNGRRSYTLLLGHSGPVYSATFSPP-GDFVLSSSADTTIRLWSTKLNANLVCYKGH 459
Query: 440 LASISCMQIDQYSTLITG-GRDAVLKLWDIDKAMADEASNSSEDNDACLYTFDSHVDEIT 498
+ Q + D ++W +D+ L H+ ++
Sbjct: 460 NYPVWDAQFSPFGHYFASCSHDRTARIWSMDRIQP-------------LRIMAGHLSDVD 506
Query: 499 AISFDGDNLVSGSQDRTVRQWDLNSGKCTQTIDISFATGPMRSQRNIPLRNSVLLTKEPP 558
+ + + +GS D+TVR WD+ +G+C + I R+ VL P
Sbjct: 507 WHP-NCNYIATGSSDKTVRLWDVQTGECVRIF--------------IGHRSMVLSLAMSP 551
Query: 559 AIGALQCFDAALATGTKDGIVRLWDLRSGKVVRMLEGHTDAITSLQF 605
+A+G +DG + +WDL + + + L GH + SL +
Sbjct: 552 D-------GRYMASGDEDGTIMMWDLSTARCITPLMGHNSCVWSLSY 591
>At4g04940 [R] KOG1539 WD repeat protein
Length = 931
Score = 53.5 bits (127), Expect = 1e-06
Identities = 31/75 (41%), Positives = 45/75 (59%), Gaps = 2/75 (2%)
Query: 570 LATGTKDGIVRLWDLRSGKVVRMLEGHTDAITSLQF--DSVNLVTGAMDRSIRIWDLRTG 627
LAT D ++RL+D+ + K+VR GHTD IT L F D +++ +MD S+RIWD+
Sbjct: 551 LATVADDFVIRLYDVVTLKMVREFRGHTDRITDLCFSEDGKWVISSSMDGSLRIWDVILA 610
Query: 628 ILSDVFAYEQPITSL 642
D + PIT+L
Sbjct: 611 KQIDGVHVDVPITAL 625
>At3g20740 [K] KOG1034 Transcriptional repressor EED/ESC/FIE required for
transcriptional silencing WD repeat superfamily
Length = 369
Score = 53.5 bits (127), Expect = 1e-06
Identities = 35/133 (26%), Positives = 67/133 (50%), Gaps = 18/133 (13%)
Query: 570 LATGTKDGIVRLWDLRSGKVVRMLEGHTDAITSLQFDSVN---LVTGAMDRSIRIWDLRT 626
+A G GI+R+ D+ S + + L GH D++ ++ + ++T + D S+R+W++ T
Sbjct: 101 VAAGGVKGIIRVIDVNSETIHKSLVGHGDSVNEIRTQPLKPQLVITASKDESVRLWNVET 160
Query: 627 GILSDVFA----YEQPITSLHF---DLDKIVISNNEPTVKIYNRKDGNHW------FCGE 673
GI +FA + + S+ F D+ + + T+KI++ K+ W F
Sbjct: 161 GICILIFAGAGGHRYEVLSVDFHPSDIYRFASCGMDTTIKIWSMKE--FWTYVEKSFTWT 218
Query: 674 DDPEQGNVDFVRY 686
DDP + FV++
Sbjct: 219 DDPSKFPTKFVQF 231
>Hs11968023 [R] KOG1721 FOG: Zn-finger
Length = 1883
Score = 53.1 bits (126), Expect = 1e-06
Identities = 53/265 (20%), Positives = 105/265 (39%), Gaps = 70/265 (26%)
Query: 409 FGTMCSAGSLDHSVKVWDLSKKKQIATLHGHLASISCMQIDQYSTLITGGRDAVLKLWDI 468
FG + S D +V+V++L +K I GH + ++C+ + Q T G++
Sbjct: 1540 FGNLLYTCSADKTVRVYNLVSRKCIGVFEGHTSKVNCLLVTQ-----TSGKN-------- 1586
Query: 469 DKAMADEASNSSEDNDACLYTFDSHVDEITAISFDGDNLVSGSQDRTVRQWDLNSGKCTQ 528
A LYT GS D T+R +++ S +C +
Sbjct: 1587 ----------------AALYT--------------------GSSDHTIRCYNVKSRECVE 1610
Query: 529 TIDISFATGPMRSQRNI---PLRNSVLLTKEPPAIGALQCFDA----------------- 568
+ + + S+ I L N ++T L+ F+
Sbjct: 1611 QLQLEDRVLCLHSRWRILYAGLANGTVVTFNIKNNKRLEIFECHGPRAVSCLATAQEGAR 1670
Query: 569 -ALATGTKDGIVRLWDLRSGKVVRMLEGHTDAITSLQFDSVNLVTGAMDRSIRIWDLRTG 627
L G+ D + + D R+G ++R LEGH+ I ++ + + +G+ D+S+ ++ TG
Sbjct: 1671 KLLVVGSYDCTISVRDARNGLLLRTLEGHSKTILCMKVVNDLVFSGSSDQSVHAHNIHTG 1730
Query: 628 ILSDVFAYEQPITSLHFDLDKIVIS 652
L ++ ++ L K++++
Sbjct: 1731 ELVRIYKGHNHAVTVVNILGKVMVT 1755
>YOR269w [S] KOG0295 WD40 repeat-containing protein
Length = 494
Score = 52.8 bits (125), Expect = 2e-06
Identities = 27/76 (35%), Positives = 42/76 (54%), Gaps = 4/76 (5%)
Query: 455 ITGGRDAVLKLWDID--KAMADEAS--NSSEDNDACLYTFDSHVDEITAISFDGDNLVSG 510
++ RD +K+W+I MA A N ++ N C+ T H+ + IS G L S
Sbjct: 374 VSASRDRTIKIWEIPLPTLMAHRAPIPNPTDSNFRCVLTLKGHLSWVRDISIRGQYLFSC 433
Query: 511 SQDRTVRQWDLNSGKC 526
+ D++VR WDLN+G+C
Sbjct: 434 ADDKSVRCWDLNTGQC 449
Score = 52.4 bits (124), Expect = 2e-06
Identities = 53/224 (23%), Positives = 93/224 (40%), Gaps = 43/224 (19%)
Query: 429 KKKQIATLHGHLASISCMQIDQYST---LITGGRDAVLKLWDIDKAMADEASNSSEDNDA 485
K +QI +L GH +S ++I Q + + + RD +K+WD N
Sbjct: 242 KFQQIRSLLGHEHIVSAVKIWQKNNDVHIASCSRDQTVKIWDFH-------------NGW 288
Query: 486 CLYTFDSHVDEITAISFDGDNLVSGSQDRTVRQWDLNSGKCTQTIDISFATG---PMRSQ 542
L TF H + +I GD ++SGS D T+R SG +S TG P+
Sbjct: 289 SLKTFQPHSQWVRSIDVLGDYIISGSHDTTLRLTHWPSGN-----GLSVGTGHEFPIEKV 343
Query: 543 RNIP-LRNSVLLTKEPPAIGALQCFDAALA-TGTKDGIVRLWDL---------------- 584
+ I + +S + P+ + + + ++D +++W++
Sbjct: 344 KFIHFIEDSPEIRFRTPSTDRYKNWGMQYCVSASRDRTIKIWEIPLPTLMAHRAPIPNPT 403
Query: 585 -RSGKVVRMLEGHTDAITSLQFDSVNLVTGAMDRSIRIWDLRTG 627
+ + V L+GH + + L + A D+S+R WDL TG
Sbjct: 404 DSNFRCVLTLKGHLSWVRDISIRGQYLFSCADDKSVRCWDLNTG 447
Database: KOG eukaryal database 04/03
Posted date: Apr 14, 2003 1:07 PM
Number of letters in database: 30,389,216
Number of sequences in database: 60,738
Lambda K H
0.314 0.132 0.373
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 42,012,589
Number of Sequences: 60738
Number of extensions: 1840816
Number of successful extensions: 11232
Number of sequences better than 1.0e-05: 285
Number of HSP's better than 0.0 without gapping: 26
Number of HSP's successfully gapped in prelim test: 271
Number of HSP's that attempted gapping in prelim test: 7738
Number of HSP's gapped (non-prelim): 1531
length of query: 705
length of database: 30,389,216
effective HSP length: 113
effective length of query: 592
effective length of database: 23,525,822
effective search space: 13927286624
effective search space used: 13927286624
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)