ORF STATUS Function Best COG Functional category Pathways and functional systems
r_klactVI5772 good YU KOG2020 Intracellular trafficking, secretion, and vesicular transport Nuclear transport receptor CRM1/MSN5 (importin beta superfamily)
r_klactVI5772 good YU KOG2020 Nuclear structure Nuclear transport receptor CRM1/MSN5 (importin beta superfamily)
Only best alignment is shown:
BLASTP 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= r_klactVI5772 2012016 2008354 -1221
(1221 letters)
Database: KOG eukaryal database 04/03
60,738 sequences; 30,389,216 total letters
Searching..................................................done
Color Key for Alignment Scores: 
Score E
Sequences producing significant alignments: (bits) Value
YDR335w [YU] KOG2020 Nuclear transport receptor CRM1/MSN5 (impor... 1678 0.0
SPAC328.01c [YU] KOG2020 Nuclear transport receptor CRM1/MSN5 (i... 300 1e-80
Hs22060276 [YU] KOG2020 Nuclear transport receptor CRM1/MSN5 (im... 91 1e-17
7293623 [YU] KOG2020 Nuclear transport receptor CRM1/MSN5 (impor... 65 7e-10
>YDR335w [YU] KOG2020 Nuclear transport receptor CRM1/MSN5 (importin beta
superfamily)
Length = 1224
Score = 1678 bits (4346), Expect = 0.0
Identities = 811/1224 (66%), Positives = 999/1224 (81%), Gaps = 3/1224 (0%)
Query: 1 MENSGASQVVAALEVIYDPKSDNAKRLDAQKFLDEVKEREESPFWGYEIALNNPQNSILK 60
M+++GASQ+V+AL+VIY PKS+N++R +AQKFLDEVK ESPFWGYEIAL NP NSILK
Sbjct: 1 MDSTGASQIVSALDVIYSPKSNNSQRQEAQKFLDEVKLCSESPFWGYEIALQNPTNSILK 60
Query: 61 HFGLGLLVNALKKNWSGYDEEKRMALRKWIIELNYRVQPNDPRYIREKLAFLWVEIAKRI 120
+FGLGLL +A+KKNW+ YDE KR+ALRKW++ELN+ VQ D RYI+EKLA LWVE+AKR
Sbjct: 61 YFGLGLLDHAVKKNWNDYDEGKRVALRKWVMELNFGVQDYDTRYIKEKLATLWVEVAKRT 120
Query: 121 WGEALKVEEPTEEQLAESWVDMDRCLTELWQMNEASRELVLIIFRTLFEDTFLLEDVAVL 180
WGEALK PTEEQL SWVDMD L ELW +N++SREL LIIFR LFED FLL+D+ VL
Sbjct: 121 WGEALKQTNPTEEQLLTSWVDMDNNLFELWNINQSSRELALIIFRILFEDVFLLDDLIVL 180
Query: 181 KRLPIIQPLCIMIVCPMDVFSVKYKYSGKWEMFKSNPEGWFALFTSELKAALEVENAQYI 240
KR+ +IQPLC+MIVCP++VF++KYK+S KW FK+N EGWF+++ EL AL+ N++YI
Sbjct: 181 KRMTVIQPLCVMIVCPIEVFAIKYKFSDKWTKFKANEEGWFSVWIPELNNALQQNNSEYI 240
Query: 241 VRLLETLKSCLNWPLSEVIVSNDVFSALLGCLTKDIPKAQSIALDSIHILLTRPYSNTDH 300
+RLLETLK+CLNWPL+EVIV NDV S+LL CL+ +IP+AQS+ALDSIHILLTRPYSN H
Sbjct: 241 IRLLETLKTCLNWPLTEVIVRNDVLSSLLTCLSSNIPRAQSMALDSIHILLTRPYSNESH 300
Query: 301 YNMIVNRVFDSMGLMDTVYSQLLFDPIEGIDEAKYPIMKKFVDMITCLYTCVLKISDLQN 360
Y M ++RVFD+M L+D+VY LLFDP + IDE KYPI+KKFVDMI+CLY CV KI +
Sbjct: 301 YQMTIDRVFDNMDLLDSVYESLLFDPTDDIDETKYPIIKKFVDMISCLYVCVPKIKETNG 360
Query: 361 -IETYMKLVLKTTYNPSLIVSGLSLDLWCACLRNDEFLPILEKLVIPDLLEFAGNALIYY 419
I+ Y KLVLKTTYNPSLIVSGL+LDLWC CLRNDE+LP LEK VIPDLL+FA +AL+YY
Sbjct: 361 QIQKYFKLVLKTTYNPSLIVSGLTLDLWCTCLRNDEYLPKLEKYVIPDLLQFAADALVYY 420
Query: 420 EQIEDHVSKNFVEVDFQSTAEYENYCSSYRKRIRDIIRLISCVQLDFAYDWLCERLNKYF 479
EQI+ H+SK F E+DFQS +E++ +CS+YRKRIRDIIRLISCV+LD YDWL RLN YF
Sbjct: 421 EQIDGHISKKFAEIDFQSKSEFQTFCSTYRKRIRDIIRLISCVELDLTYDWLNNRLNNYF 480
Query: 480 GSQFGQQVLSSTYLDHKSEPYLSALTQFMIVECFINGCIRWKIWYTDESTFSQKLDAILA 539
S FGQQVLSST+LDHK EPYL AL+Q+MIVECFINGCIRWKIWY + +KLD+IL
Sbjct: 481 SSPFGQQVLSSTFLDHKLEPYLGALSQYMIVECFINGCIRWKIWYPTGDDYDEKLDSILQ 540
Query: 540 KVEMLSNQXXXXXXXXXXXXKKQIQNFALFLTILKDNVLFTLLEKIITTATLEYPEIDMN 599
K+E+LSNQ KKQIQNFALFLT+LKDNVLFTLLEKIIT+AT++YPEI++
Sbjct: 541 KLEILSNQLIALNLREPLLLKKQIQNFALFLTMLKDNVLFTLLEKIITSATMDYPEINLE 600
Query: 600 EKSEQSDAVRDLRYACGIELNRMALLMPASLQPIYPDLENVVAGILPKLSSHETISFKSF 659
E+ +SDAVRDLRYACGIELNRMALLMP SL+ IYPDLE+V+A I+P LS HE ISFKSF
Sbjct: 601 ERGAESDAVRDLRYACGIELNRMALLMPESLKKIYPDLESVIARIMPNLSYHEKISFKSF 660
Query: 660 LLTIVLKSNLENKGEKFAQLVDPEFAAWSDKGTVVGLTDLPWFLERLGIVKIAEYFQRRN 719
LL IVLKS+L+ K E+FA +VDPE AWSDK TVVGL+DL WF+ERLGIV+IAEYFQRR+
Sbjct: 661 LLIIVLKSSLDMKEERFAAIVDPELLAWSDKTTVVGLSDLHWFMERLGIVQIAEYFQRRD 720
Query: 720 IDENSDLLSIQMDEDGKKLKADLTQHWQTIFPVRATRMFIHYSMQSVKGDVEFRMLQELW 779
IDENSDLLSI +D++GK+LK++LT+ WQ++FPVRATRMFIHYSMQS+K D EF+MLQ+LW
Sbjct: 721 IDENSDLLSIPIDDEGKELKSELTKRWQSLFPVRATRMFIHYSMQSIKTDEEFKMLQDLW 780
Query: 780 KPRIVPILPYILRLLFQLQSYHNPANWASLPTVVQSFVRVSTVERFWEAGATNKSKDEFI 839
+PRIVPILPYI RLL+QLQSYH+P NW LPTVVQSFV+ ST+ERFWEAGA+NKSKDEFI
Sbjct: 781 RPRIVPILPYITRLLYQLQSYHDPDNWKGLPTVVQSFVKYSTIERFWEAGASNKSKDEFI 840
Query: 840 DEHNKALQTVRDFADSVGHIVRYTREYVLLVLASMSGLGSIFFEVDNLANLMMDSIAIYT 899
DEH KA+QT+RDFADSVGHI+RYTREY LLVL+++S LGS+F+ +D +L+++SIAI+
Sbjct: 841 DEHMKAMQTLRDFADSVGHIIRYTREYTLLVLSAISSLGSVFYLLDESPDLLLNSIAIFK 900
Query: 900 P-DGDISPGVSTHGWKHIINVAVRPILRNCPDECAPKFMSAFLPKLFKTLDLMLEKKWST 958
P +ISPGVSTHGWKHI+N+A+RPIL+ CP +C KFM AFLPKLF+ LDL+L +KWS+
Sbjct: 901 PGSNEISPGVSTHGWKHIMNIAIRPILKGCPKDCLGKFMPAFLPKLFEILDLLLCQKWSS 960
Query: 959 H-TQSEVNPPPRDXXXXXXXXXXXXXXRQFTTVVVRLLIDSIGQVGSHTQASKIRVSVHQ 1017
H ++NP P D RQ TTVVVR++ID +GQ ++ ++K R++ HQ
Sbjct: 961 HMNDMDMNPVPTDDDQMTEEILEENLLRQLTTVVVRIVIDCVGQGNANPNSAKSRLNNHQ 1020
Query: 1018 IKMRKIIFEDINILAPFLRLLNRLVSVRDSKCSFNSILILKSCLSETLAKHPDVDRFYTT 1077
++MRKIIF D+N LAPFL+LLN L+S +D+KCSFNSIL++K CL+ L ++ VD ++T
Sbjct: 1021 MEMRKIIFNDLNTLAPFLKLLNHLISFKDTKCSFNSILVMKCCLTSVLNQNNTVDEYFTF 1080
Query: 1078 EVVPNLIMNVLTQRAFKDSFYEALYAFTVIFLTLSKEYDYFNQFLYELSRGYNIDELYTN 1137
EV+ NL++NVL AFKDSF+EALYAFTVIFLTL KEY FL+E+S GYNIDELY N
Sbjct: 1081 EVMKNLLLNVLCNSAFKDSFHEALYAFTVIFLTLCKEYPSARAFLFEISNGYNIDELYRN 1140
Query: 1138 LKQVDNYKDQRVVAAGFIDWMKDIYGDQDDSHFTADHEAKTKERREAILARAGEQLLGKN 1197
L+ VD YK QR + FIDW+K G +D + A E K +E+REAIL +A E+L+ KN
Sbjct: 1141 LRSVDEYKTQRALMIDFIDWVKSTSGKEDGNVDHAGDERKRQEKREAILKKANERLIKKN 1200
Query: 1198 KPESNMLEDPNLEGDVLGGLFDNN 1221
K +ML+DPN+E +G LFD+N
Sbjct: 1201 KENGDMLDDPNIEDGAVGNLFDDN 1224
>SPAC328.01c [YU] KOG2020 Nuclear transport receptor CRM1/MSN5 (importin beta
superfamily)
Length = 984
Score = 300 bits (767), Expect = 1e-80
Identities = 252/1002 (25%), Positives = 442/1002 (43%), Gaps = 88/1002 (8%)
Query: 1 MENSGASQVVAALEVIYDPKSDNAKRLDAQKFLDEVKEREESPFWGYEIALNNPQN---- 56
M+ G S ++ AL V++ P+S R AQ+ LDE+K+ SP ++ N Q
Sbjct: 1 MDEKGLSNILQALNVVHSPESSRETRFSAQQLLDELKDSYSSPSVAIQLLELNEQAFSSL 60
Query: 57 ------SILKHFGLGLLVNALKKNWSGYDEEKRMALRKWIIELNYRVQPND---PRYIRE 107
I++HF L L ++ NW + +++ ++ ++ +++ ++ N+ ++R
Sbjct: 61 GCKLDIHIVQHFSLSLFETSVGMNWKSFSNKEKESVTSFLCKIS--LEDNNLLSVHFVRS 118
Query: 108 KLAFLWVEIAKRIWGEALKVEEPTEEQLAESWVDMDRCLTELWQMNEASRELVLIIFRTL 167
KLA +++EIAKR W + E D L LW ++ R+L +I R +
Sbjct: 119 KLASVFIEIAKRDWYNTWREE-------------FDSFLQSLWSLSLQHRQLSSLILRGI 165
Query: 168 FEDTFLLEDVAVLKRLPIIQPLCIMIVCPMDVFSVKYKYSGKWEM-FKSNPEGWFALFTS 226
ED + +D R I+ I I+ Y + + SN EGW + +
Sbjct: 166 MEDLYQYDDPVASLRSHILFNALISILSSSSTLHKLYPSGLPYSVTIPSNNEGWLIRWGN 225
Query: 227 ELKAALEVENAQYIVRLLETLKSCLNWPLSEVIVSNDVFSALLGCLTKDIPKAQSIALDS 286
L E+ + L+ KSCL+W ++ I ++ S + L + ++ A+D
Sbjct: 226 AL------ESQDDALECLKCFKSCLSWVATDSIREANIVSHICQILVQGPIFLKTHAIDC 279
Query: 287 IHILLTRPYSNTDHYNMIVNRVFDSMGLMD-----TVYSQLLFDPIEGIDEAKYPIMKKF 341
I+I +TR D IV + L T S+ + +Y ++KK
Sbjct: 280 IYICVTRTMEIDDPLWEIVEEMLSPSSLYTLHQVYTATSESINIKTLSSTTPEYILLKKL 339
Query: 342 VDMITCL--YTCV----LKISDLQNIETYMKLVLKTTYNPSLIVSGLSLDLWCACLRNDE 395
+ I L Y + K L +++TY LVL+ +PSL++S +S W LR+
Sbjct: 340 SETIVALGQYNYLDSNRRKCIKLTSLDTYSLLVLEIMKHPSLLISAISQHFWVLALRD-- 397
Query: 396 FLPILEK-----LVIPDLLEFAGNALIYYEQ-----IEDHVSKNFVEVDFQSTAEYENYC 445
PI+ K +V P+LL A L+ +E I + + +++ D + + ++C
Sbjct: 398 --PIISKHEKFQIVYPELLSIASERLLRFEDAVVELIPESATAKYLQEDVEGVSAVHSFC 455
Query: 446 SSYRKRIRDIIRLISCVQLDFAYDWLCERLNKYFGSQFG--QQVLSSTYLDHKSEP-YLS 502
++R+ + DI+RL + + +W+ N++ + G + + S T K+ P YL+
Sbjct: 456 GNFRRFMFDIVRLTVSITPIESLNWI---QNRFQSTVLGNMEDIQSQTEFFSKTSPLYLT 512
Query: 503 ALTQFMIVECFINGCIRWKIWYTDESTFSQKLDAILAKVEMLSNQXXXXXXXXXXXXKKQ 562
F +E F++G RW +D+ + IL + + Q +
Sbjct: 513 MDVGFSTIEAFLHGVTRWNENTSDDPA---TYEIILQNLFLWCKQLVEINFKDPMLITRL 569
Query: 563 IQNFALFLTIL---KDNVLFTLLEKIITTATLEYPEIDMNEKSEQSDAVRDLRYACGIEL 619
I LF +IL +L +LEKII+ T + Q + ++R C EL
Sbjct: 570 ISVLVLFTSILARENTTLLGVVLEKIISAVTYDNTSASYGFSDVQK--INEMRSRCCFEL 627
Query: 620 NRMALLMPASLQPIYPDLENVVAGI--LPKLSSHETISFKSFLLTIVLKS--NLENKGEK 675
R+ LMP L I+ L++++ + L+ E + K+FL I S N+E K E
Sbjct: 628 VRLGELMPNPLMNIFDQLQSIIDQLDNATTLTGSEIVMLKTFLFVITQFSDVNIEVKNEY 687
Query: 676 FAQLVDPEFAAWSDKGTVVGLTDLPWFLERLGIVKIAEYFQRRNIDENSDLLSIQMDEDG 735
F +LV P W D V FL +G ++AEY + N+D ++D D
Sbjct: 688 FEKLVGPVVKTWLDVQPPVNSP--MEFLNHIGFPQMAEYLSAK-YPYNADYTQFELDADA 744
Query: 736 KKLKADLTQHWQTIFPVRATRMFIHYSMQSVK-GDVEFRMLQELWKPRIVPILPYILRLL 794
+++L + ++P++ F + + EF + LW+ + ++P +L+L+
Sbjct: 745 ASYQSNLETGRKWLWPIKCLGRFCEATCSNKHIHPSEFEGQKNLWQVILPNVVPNLLKLV 804
Query: 795 FQLQSYHNPANWASLPTVVQSFVRVSTVERFWEAGATNKSKDEFIDEHNKALQTVRDFAD 854
QL + P+ + L S ++ S VERFW G + SK++F++E K +
Sbjct: 805 EQLHCCYEPSFISGLGMHNSSILQKSIVERFWLHGVSQISKNQFLEESYKMDVSANKLIH 864
Query: 855 SVGHIVRYTREYVLLVLASMSGLGSIFFEVDNLANLMMDSIAIYTPDGDISPGVSTHGWK 914
S GH +R REY +AS LG FF V L+ + + + + G+S H W
Sbjct: 865 SFGHFLRRLREYCYYAIASFMRLGQAFFCVPGLSKQFLTAFFSH------AAGLSLHQWT 918
Query: 915 HIINVAVRPILRNCPDECAPKFMSAFLPKLFKTLDLMLEKKW 956
++NV ++P NCP E + + LP L LD L +W
Sbjct: 919 SMVNVVIKPYCVNCPAELRDECLLPLLPALLSELDHKLVSEW 960
>Hs22060276 [YU] KOG2020 Nuclear transport receptor CRM1/MSN5 (importin beta
superfamily)
Length = 1204
Score = 90.5 bits (223), Expect = 1e-17
Identities = 162/743 (21%), Positives = 293/743 (38%), Gaps = 87/743 (11%)
Query: 3 NSGASQVVAALEVIYDPKSDNAKRLDAQKFLDEVKEREESPF---WGYEIALNNPQNSIL 59
N+ Q+V A+ V+ DP S RL+A KF +E KE+ P G +A Q +I+
Sbjct: 7 NALCEQLVKAVTVMMDPNSTQRYRLEALKFCEEFKEK--CPICVPCGLRLA-EKTQVAIV 63
Query: 60 KHFGLGLLVNALKKNWSGYDEEKRMALRKWIIELNYRVQPN---DPRYIREKLAFLWVEI 116
+HFGL +L + +K W+G +++ L+ ++EL N + +I++ L+ + VE+
Sbjct: 64 RHFGLQILEHVVKFRWNGMSRLEKVYLKNSVMELIANGTLNILEEENHIKDALSRIVVEM 123
Query: 117 AKRIWGEALKVEEPTEEQLAESWVDMDRCLTELWQMNEASRELVLIIFRTLFEDTFLLED 176
KR W + W DM L L + E ELV+ I L ED +
Sbjct: 124 IKREW--------------PQHWPDMLIELDTLSKQGETQTELVMFILLRLAEDVVTFQT 169
Query: 177 VAVLKRLPIIQPLCIMIVCPMDVFSVKYKYSGKWEMFKSNPEGWFALFTSELKAALEVEN 236
+ +R I Q L +++ +S + N + + T + + N
Sbjct: 170 LPPQRRRDIQQTL---------TQNMERIFSFLLNTLQENVNKYQQVKTDTSQESKAQAN 220
Query: 237 AQYIVRLLETLKSCLNW-PLSEVIVSNDVFSALLGCLTKDIPKAQSIALDSIHILLTRPY 295
+ V L TL ++W +S + N +L CL + + Q A + + I ++R
Sbjct: 221 CRVGVAALNTLAGYIDWVSMSHITAENCKLLEIL-CLLLNEQELQLGAAECLLIAVSRKG 279
Query: 296 SNTDHYNMIVNRVFDSMGLMDTVYSQLLFDPIEGIDEAKYPIMKKFVDMITCL--YTCVL 353
D ++V +F + M + S G+ E Y +K+ ++ L C L
Sbjct: 280 KLEDRKPLMV--LFGDVA-MHYILSAAQTADGGGLVEKHYVFLKRLCQVLCALGNQLCAL 336
Query: 354 KISDL-----QNIETYMKLVLKTTYNPSLIVSGLSLDLWCACLRNDEFL--PILEKLVIP 406
+D N Y++ L T +PS + + W A R++ P+L +IP
Sbjct: 337 LGADSDVETPSNFGKYLESFLAFTTHPSQFLRSSTQMTWGALFRHEILSRDPLL-LAIIP 395
Query: 407 DLLEFAGNALIY--YEQIEDHVSKNFVEVDFQSTAEYENYCSSYRKRIRDIIRLISC--- 461
L + L+ + D S + DF S ++ + +S R + +++RL +C
Sbjct: 396 KYLRASMTNLVKMGFPSKTDSPSCEYSRFDFDSDEDFNAFFNSSRAQQGEVMRL-ACRLD 454
Query: 462 --VQLDFAYDWLCERLNKYFGSQFGQQVLSSTYLDHKSEPYLSAL--TQFMIVECFINGC 517
A +WL +L ST+LD S SA+ + + F
Sbjct: 455 PKTSFQMAGEWLKYQL--------------STFLDAGSVNSCSAVGTGEGSLCSVFSPSF 500
Query: 518 IRWKIWYTDESTFSQKLDAILAKVEMLSNQXXXXXXXXXXXXKKQIQNFALFLT------ 571
++W+ + ++ L + E+ N K + LT
Sbjct: 501 VQWEAMTLFLESVITQMFRTLNREEIPVNDGIELLQMVLNFDTKDPLILSCVLTNVSALF 560
Query: 572 ---ILKDNVLFTLLEKIITTATLEYPEIDMNEKSEQSDAVRDLRYACGIELNRMALLMPA 628
+ L + K+ ++ T E E K+ ++ AVR++R + +M P
Sbjct: 561 PFVTYRPEFLPQVFSKLFSSVTFETVE---ESKAPRTRAVRNVRRHACSSIIKMCRDYPQ 617
Query: 629 SLQPIYPDLENVVAGILPK---LSSHETISFKSFLLTIVLK-SNLENKGEKFAQLVDPEF 684
+ P + L N V +L L+ E + L+ I + N E + +L+ P
Sbjct: 618 LVLPNFDMLYNHVKQLLSNELLLTQMEKCALMEALVLISNQFKNYERQKVFLEELMAPVA 677
Query: 685 AAWSDKGTVVGLTDLPWFLERLG 707
+ W + L+D+ F+ +G
Sbjct: 678 SIWLSQDMHRVLSDVDAFIAYVG 700
>7293623 [YU] KOG2020 Nuclear transport receptor CRM1/MSN5 (importin beta
superfamily)
Length = 1241
Score = 65.1 bits (157), Expect = 7e-10
Identities = 49/179 (27%), Positives = 89/179 (49%), Gaps = 23/179 (12%)
Query: 6 ASQVVAALEVIYDPKSDNAKRLDAQKFLDEVKEREESPFW---GYEIALNNPQNSILKHF 62
A+++ +A++++ +P + RL+A + KE ESP G +A + N ++HF
Sbjct: 11 AAELASAIDLVMNPMTQQQARLEAYMACERFKE--ESPMCAQVGLFLASSPQSNQQVRHF 68
Query: 63 GLGLLVNALKKNWSGYDEEKRMALRKWIIE-LNYRVQPNDPRYI---REKLAFLWVEIAK 118
GL L+ +K W+ E+++ ++ I+ LN V P + R + ++ L+ + VE+ K
Sbjct: 69 GLQLIEYTIKYRWNCITHEEKVYIKDNAIKMLNVGVGPAEDRSLLPTKDALSRIIVEMIK 128
Query: 119 RIWGEALKVEEPTEEQLAESWVDMDRCLTELWQMNEASRELVLIIFRTLFEDTFLLEDV 177
R W + W D+ L++ EA ELVL++F L ED LL+ +
Sbjct: 129 REW--------------PQQWSDLLPELSQACTKGEAQTELVLLVFLRLVEDVALLQTI 173
Database: KOG eukaryal database 04/03
Posted date: Apr 14, 2003 1:07 PM
Number of letters in database: 30,389,216
Number of sequences in database: 60,738
Lambda K H
0.322 0.138 0.409
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 70,125,741
Number of Sequences: 60738
Number of extensions: 2944967
Number of successful extensions: 7190
Number of sequences better than 1.0e-05: 4
Number of HSP's better than 0.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 7170
Number of HSP's gapped (non-prelim): 5
length of query: 1221
length of database: 30,389,216
effective HSP length: 118
effective length of query: 1103
effective length of database: 23,222,132
effective search space: 25614011596
effective search space used: 25614011596
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)