ORF STATUS Function Best COG Functional category Pathways and functional systems
r_klactVI5830 check: MH R KOG0391 General function prediction only SNF2 family DNA-dependent ATPase
Only best alignment is shown:
BLASTP 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= r_klactVI5830 2028523 2023808 -1572
(1572 letters)
Database: KOG eukaryal database 04/03
60,738 sequences; 30,389,216 total letters
Searching..................................................done
Color Key for Alignment Scores: 
Score E
Sequences producing significant alignments: (bits) Value
YDR334w [R] KOG0391 SNF2 family DNA-dependent ATPase 1403 0.0
At3g12810 [R] KOG0391 SNF2 family DNA-dependent ATPase 681 0.0
Hs5730067 [R] KOG0391 SNF2 family DNA-dependent ATPase 447 e-125
CE25717 [R] KOG0391 SNF2 family DNA-dependent ATPase 412 e-114
At3g57300 [L] KOG0388 SNF2 family DNA-dependent ATPase 290 2e-77
YGL150c [L] KOG0388 SNF2 family DNA-dependent ATPase 289 2e-77
Hs15805014 [R] KOG0391 SNF2 family DNA-dependent ATPase 287 8e-77
ECU09g1890 [L] KOG0388 SNF2 family DNA-dependent ATPase 271 5e-72
7294205 [BK] KOG0386 Chromatin remodeling complex SWI/SNF compon... 269 3e-71
Hs21071050 [BK] KOG0386 Chromatin remodeling complex SWI/SNF com... 266 2e-70
Hs21071048 [BK] KOG0386 Chromatin remodeling complex SWI/SNF com... 266 2e-70
Hs21071056 [BK] KOG0386 Chromatin remodeling complex SWI/SNF com... 262 3e-69
7300511 [L] KOG0388 SNF2 family DNA-dependent ATPase 262 4e-69
Hs21071058 [K] KOG0385 Chromatin remodeling complex WSTF-ISWI sm... 261 6e-69
At3g06400 [K] KOG0385 Chromatin remodeling complex WSTF-ISWI sma... 259 3e-68
CE05553 [BK] KOG0386 Chromatin remodeling complex SWI/SNF compon... 257 9e-68
At5g18620 [K] KOG0385 Chromatin remodeling complex WSTF-ISWI sma... 256 2e-67
Hs21071044 [K] KOG0385 Chromatin remodeling complex WSTF-ISWI sm... 256 2e-67
At5g19310 [BK] KOG0386 Chromatin remodeling complex SWI/SNF comp... 255 3e-67
YOR290c [BK] KOG0386 Chromatin remodeling complex SWI/SNF compon... 252 4e-66
At3g06010 [BK] KOG0386 Chromatin remodeling complex SWI/SNF comp... 251 6e-66
YIL126w [BK] KOG0386 Chromatin remodeling complex SWI/SNF compon... 251 8e-66
SPAC1250.01 [BK] KOG0386 Chromatin remodeling complex SWI/SNF co... 249 2e-65
YOR304w [K] KOG0385 Chromatin remodeling complex WSTF-ISWI small... 246 2e-64
7303422 [K] KOG0385 Chromatin remodeling complex WSTF-ISWI small... 243 2e-63
CE00789 [K] KOG0385 Chromatin remodeling complex WSTF-ISWI small... 242 3e-63
At2g46020 [BK] KOG0386 Chromatin remodeling complex SWI/SNF comp... 241 5e-63
CE27114 [BK] KOG0386 Chromatin remodeling complex SWI/SNF compon... 240 1e-62
At2g28290 [BK] KOG0386 Chromatin remodeling complex SWI/SNF comp... 234 1e-60
YBR245c [K] KOG0385 Chromatin remodeling complex WSTF-ISWI small... 233 1e-60
Hs21914927 [K] KOG0385 Chromatin remodeling complex WSTF-ISWI sm... 226 2e-58
At2g13370 [K] KOG0384 Chromodomain-helicase DNA-binding protein 222 3e-57
Hs21071046 [K] KOG0385 Chromatin remodeling complex WSTF-ISWI sm... 222 4e-57
At5g66750 [K] KOG0385 Chromatin remodeling complex WSTF-ISWI sma... 220 2e-56
YFR038w [K] KOG0385 Chromatin remodeling complex WSTF-ISWI small... 218 6e-56
SPAC3G6.12 [L] KOG0388 SNF2 family DNA-dependent ATPase 215 5e-55
Hs14149730 [B] KOG0389 SNF2 family DNA-dependent ATPase 214 7e-55
Hs4557451 [R] KOG0383 Predicted helicase 213 1e-54
Hs20533808 [R] KOG0383 Predicted helicase 212 4e-54
YER164w [K] KOG0384 Chromodomain-helicase DNA-binding protein 209 2e-53
SPAC3G6.01 [K] KOG0384 Chromodomain-helicase DNA-binding protein 208 6e-53
Hs4557449 [K] KOG0384 Chromodomain-helicase DNA-binding protein 206 2e-52
At2g25170 [R] KOG0383 Predicted helicase 205 4e-52
Hs4557453 [R] KOG0383 Predicted helicase 205 5e-52
ECU10g1320 [K] KOG0385 Chromatin remodeling complex WSTF-ISWI sm... 203 2e-51
CE03657 [R] KOG0383 Predicted helicase 202 3e-51
SPAC1783.05 [K] KOG0384 Chromodomain-helicase DNA-binding protein 202 4e-51
Hs20536191 [K] KOG0385 Chromatin remodeling complex WSTF-ISWI sm... 201 1e-50
CE11572 [K] KOG0384 Chromodomain-helicase DNA-binding protein 197 1e-49
SPCC1235.05c [B] KOG0389 SNF2 family DNA-dependent ATPase 196 2e-49
YAL019w [B] KOG0389 SNF2 family DNA-dependent ATPase 196 3e-49
Hs4557447 [K] KOG0384 Chromodomain-helicase DNA-binding protein 195 4e-49
CE17716 [R] KOG0383 Predicted helicase 194 7e-49
7295870 [K] KOG0384 Chromodomain-helicase DNA-binding protein 194 1e-48
YPL082c [K] KOG0392 SNF2 family DNA-dependent ATPase domain-cont... 193 2e-48
SPBC1826.01c [K] KOG0392 SNF2 family DNA-dependent ATPase domain... 192 4e-48
CE16277 [B] KOG0389 SNF2 family DNA-dependent ATPase 192 4e-48
7297570 [B] KOG0389 SNF2 family DNA-dependent ATPase 192 4e-48
Hs4557565 [KL] KOG0387 Transcription-coupled repair protein CSB/... 189 3e-47
SPAC25A8.01c [B] KOG0389 SNF2 family DNA-dependent ATPase 186 3e-46
SPAC20G8.08c [B] KOG0389 SNF2 family DNA-dependent ATPase 186 3e-46
Hs22047300 [K] KOG0384 Chromodomain-helicase DNA-binding protein 181 1e-44
Hs21362042 [K] KOG0384 Chromodomain-helicase DNA-binding protein 179 3e-44
7293795 [R] KOG0383 Predicted helicase 177 2e-43
Hs22047966 [K] KOG0384 Chromodomain-helicase DNA-binding protein 176 3e-43
CE18196 [K] KOG0384 Chromodomain-helicase DNA-binding protein 176 3e-43
At2g02090 [B] KOG0389 SNF2 family DNA-dependent ATPase 174 1e-42
Hs17454125 [K] KOG0392 SNF2 family DNA-dependent ATPase domain-c... 173 2e-42
At5g44800 [R] KOG0383 Predicted helicase 172 3e-42
7300091 [K] KOG0392 SNF2 family DNA-dependent ATPase domain-cont... 170 2e-41
YJR035w [KL] KOG0387 Transcription-coupled repair protein CSB/RA... 167 2e-40
At3g54280 [K] KOG0392 SNF2 family DNA-dependent ATPase domain-co... 166 4e-40
At2g44980 [K] KOG0385 Chromatin remodeling complex WSTF-ISWI sma... 164 8e-40
ECU01g0350 [K] KOG0384 Chromodomain-helicase DNA-binding protein 156 2e-37
At2g18760 [KL] KOG0387 Transcription-coupled repair protein CSB/... 155 6e-37
SPBP35G2.10 [R] KOG0383 Predicted helicase 154 1e-36
SPCP25A2.02c [KL] KOG0387 Transcription-coupled repair protein C... 153 2e-36
HsM8922362 [K] KOG0385 Chromatin remodeling complex WSTF-ISWI sm... 150 1e-35
Hs14767157 [K] KOG0385 Chromatin remodeling complex WSTF-ISWI sm... 150 1e-35
ECU09g0410 [KL] KOG0387 Transcription-coupled repair protein CSB... 147 1e-34
At1g03750 [KL] KOG0387 Transcription-coupled repair protein CSB/... 147 1e-34
Hs13376715 [K] KOG0384 Chromodomain-helicase DNA-binding protein 144 1e-33
Hs6912622_2 [L] KOG0390 DNA repair protein SNF2 family 140 2e-32
CE11028 [KL] KOG0387 Transcription-coupled repair protein CSB/RA... 138 6e-32
7296236 [K] KOG0384 Chromodomain-helicase DNA-binding protein 136 2e-31
At3g19210 [L] KOG0390 DNA repair protein SNF2 family 133 2e-30
HsM14149926 [K] KOG0384 Chromodomain-helicase DNA-binding protein 132 3e-30
CE15856 [K] KOG0392 SNF2 family DNA-dependent ATPase domain-cont... 130 2e-29
ECU03g1530 [K] KOG0392 SNF2 family DNA-dependent ATPase domain-c... 130 2e-29
Hs4506397 [L] KOG0390 DNA repair protein SNF2 family 129 5e-29
SPAC15A10.03c [L] KOG0390 DNA repair protein SNF2 family 125 5e-28
7295868 [L] KOG0390 DNA repair protein SNF2 family 125 5e-28
At5g63950 [KL] KOG0387 Transcription-coupled repair protein CSB/... 124 9e-28
At4g31900 [R] KOG0383 Predicted helicase 120 2e-26
At3g16600 [KL] KOG1001 Helicase-like transcription factor HLTF/D... 117 1e-25
At5g43530 [KL] KOG1001 Helicase-like transcription factor HLTF/D... 117 2e-25
At5g22750 [KL] KOG1001 Helicase-like transcription factor HLTF/D... 115 7e-25
YOR191w [KL] KOG1001 Helicase-like transcription factor HLTF/DNA... 114 2e-24
YBR073w [L] KOG0390 DNA repair protein SNF2 family 112 4e-24
CE25143 [L] KOG0390 DNA repair protein SNF2 family 112 4e-24
Hs4757978 [K] KOG0385 Chromatin remodeling complex WSTF-ISWI sma... 112 6e-24
SPBC23E6.02 [KL] KOG1001 Helicase-like transcription factor HLTF... 110 2e-23
SPAC22F3.03c [L] KOG0390 DNA repair protein SNF2 family 110 2e-23
CE23323 [L] KOG0390 DNA repair protein SNF2 family 110 2e-23
YGL163c [L] KOG0390 DNA repair protein SNF2 family 109 3e-23
Hs17437081 [B] KOG0389 SNF2 family DNA-dependent ATPase 107 2e-22
YBR114w [L] KOG1002 Nucleotide excision repair protein RAD16 106 3e-22
SPCC330.01c [L] KOG1002 Nucleotide excision repair protein RAD16 106 3e-22
SPCC1620.14c [BK] KOG0386 Chromatin remodeling complex SWI/SNF c... 105 6e-22
SPBC582.10c [KL] KOG1001 Helicase-like transcription factor HLTF... 105 6e-22
7293730 [R] KOG0383 Predicted helicase 105 6e-22
At1g11100 [KL] KOG1001 Helicase-like transcription factor HLTF/D... 105 7e-22
At1g08600 [K] KOG1015 Transcription regulator XNP/ATRX DEAD-box ... 102 5e-21
CE17477 [R] KOG1016 Predicted DNA helicase DEAD-box superfamily 102 6e-21
At1g61140 [KL] KOG1001 Helicase-like transcription factor HLTF/D... 100 2e-20
SPAC17A2.12 [KL] KOG1001 Helicase-like transcription factor HLTF... 99 5e-20
At1g05120 [L] KOG1002 Nucleotide excision repair protein RAD16 99 7e-20
Hs19923174 [KL] KOG4439 RNA polymerase II transcription terminat... 98 9e-20
Hs21071052 [KL] KOG1001 Helicase-like transcription factor HLTF/... 97 2e-19
7298963 [KL] KOG4439 RNA polymerase II transcription termination... 97 3e-19
Hs20538502 [R] KOG1016 Predicted DNA helicase DEAD-box superfamily 96 3e-19
7301343 [K] KOG1015 Transcription regulator XNP/ATRX DEAD-box su... 96 5e-19
At1g50410 [KL] KOG1001 Helicase-like transcription factor HLTF/D... 94 2e-18
At5g05130 [KL] KOG1001 Helicase-like transcription factor HLTF/D... 93 4e-18
At1g02670 [L] KOG1002 Nucleotide excision repair protein RAD16 93 4e-18
CE11083 [KL] KOG4439 RNA polymerase II transcription termination... 92 7e-18
At3g20010 [KL] KOG1001 Helicase-like transcription factor HLTF/D... 92 7e-18
SPAC11E3.01c [R] KOG0391 SNF2 family DNA-dependent ATPase 92 9e-18
Hs20336209 [K] KOG1015 Transcription regulator XNP/ATRX DEAD-box... 92 9e-18
Hs20336207 [K] KOG1015 Transcription regulator XNP/ATRX DEAD-box... 92 9e-18
Hs20336205 [K] KOG1015 Transcription regulator XNP/ATRX DEAD-box... 92 9e-18
CE17314 [K] KOG1015 Transcription regulator XNP/ATRX DEAD-box su... 89 7e-17
7291744 [R] KOG1016 Predicted DNA helicase DEAD-box superfamily 89 7e-17
Hs21071060 [B] KOG1000 Chromatin remodeling protein HARP/SMARCAL... 87 2e-16
YLR032w [KL] KOG1001 Helicase-like transcription factor HLTF/DNA... 84 2e-15
At1g48310 [B] KOG1000 Chromatin remodeling protein HARP/SMARCAL1... 83 3e-15
At5g07810 [B] KOG1000 Chromatin remodeling protein HARP/SMARCAL1... 82 9e-15
CE14110 [KL] KOG4439 RNA polymerase II transcription termination... 80 2e-14
7298962 [KL] KOG4439 RNA polymerase II transcription termination... 78 1e-13
CE11450 [KL] KOG4439 RNA polymerase II transcription termination... 77 2e-13
Hs20532976 [B] KOG1000 Chromatin remodeling protein HARP/SMARCAL... 74 2e-12
7296909 [B] KOG1000 Chromatin remodeling protein HARP/SMARCAL1 D... 73 4e-12
ECU06g0820 [B] KOG1000 Chromatin remodeling protein HARP/SMARCAL... 72 5e-12
CE27689 [B] KOG1000 Chromatin remodeling protein HARP/SMARCAL1 D... 72 7e-12
CE27688 [B] KOG1000 Chromatin remodeling protein HARP/SMARCAL1 D... 72 7e-12
SPAC144.05 [L] KOG0298 DEAD box-containing helicase-like transcr... 70 2e-11
Hs22048060 [K] KOG0384 Chromodomain-helicase DNA-binding protein 65 7e-10
At1g05480 [L] KOG0390 DNA repair protein SNF2 family 65 9e-10
At3g24340 [L] KOG0390 DNA repair protein SNF2 family 64 1e-09
SPAC13G6.01c [KL] KOG1001 Helicase-like transcription factor HLT... 64 2e-09
At2g16390 [L] KOG0390 DNA repair protein SNF2 family 64 2e-09
At2g21450 [L] KOG0390 DNA repair protein SNF2 family 63 4e-09
CE23294 [KL] KOG4439 RNA polymerase II transcription termination... 62 9e-09
At2g40770 [L] KOG0298 DEAD box-containing helicase-like transcri... 60 3e-08
Hs17441908 [B] KOG1000 Chromatin remodeling protein HARP/SMARCAL... 57 2e-07
At3g42670 [L] KOG0390 DNA repair protein SNF2 family 55 7e-07
Hs22054523 [L] KOG0298 DEAD box-containing helicase-like transcr... 54 2e-06
At5g20420 [L] KOG0390 DNA repair protein SNF2 family 53 4e-06
YLR247c [L] KOG0298 DEAD box-containing helicase-like transcript... 52 1e-05
7295362 [L] KOG0298 DEAD box-containing helicase-like transcript... 52 1e-05
>YDR334w [R] KOG0391 SNF2 family DNA-dependent ATPase
Length = 1514
Score = 1403 bits (3632), Expect = 0.0
Identities = 735/1309 (56%), Positives = 903/1309 (68%), Gaps = 47/1309 (3%)
Query: 299 EEYYFTSSSEDDDNEKPRTALQKKSLPNRLKVKLHVNAPRQTITNPLHVLKPEYADVHSF 358
+ +YFT+SSE++D +K R +KK ++KL V+ P+QTITNPLHV+KP Y +H +
Sbjct: 218 DNFYFTTSSEEEDIKKKRGRKKKKP-----RIKLVVHPPKQTITNPLHVVKPGYESLHEY 272
Query: 359 LQSYKSLDEDVSLEEYDSYIKEQRKTAKLIRIGFERGAIKYDPQTDSLQSLSLRDVMPP- 417
+ S+KSL++D++LEEY+ YI EQR+ ++ G E GA+KYD +TDSLQ ++ +++
Sbjct: 273 IASFKSLEDDLTLEEYNKYIDEQRRLLSRLKKGIENGALKYDKETDSLQPITSKEIKTII 332
Query: 418 SNAAEPISVYYKEQSKHTFQDHLVNQGIVLSKSFQDSRRSQIAKARRVAQIIESHFKHIA 477
+ +PIS +YK+Q DHL+NQGI +SK F+ S +++IA+A++V+Q+IE HFKH+A
Sbjct: 333 TYKPDPISYFYKQQDLQIHTDHLINQGIHMSKLFRSSTKARIARAKKVSQMIEQHFKHVA 392
Query: 478 GAXXXXXXXXXXXXXNLARFAMQAVKKRWTMAEKAYKVLKKDELDQLERIQGKQHLTEML 537
GA +LARFA+QAVKKRW MAEKAY++L+KDE +QL+RI+GKQHL++ML
Sbjct: 393 GAEERKAKEEERHKKSLARFAVQAVKKRWNMAEKAYRILRKDEEEQLKRIEGKQHLSKML 452
Query: 538 EQSTQLLGAQLNQLDSCTYPXXXXXXXXXXXXXXXXDGNSDIDDEMMSTSSCDSDKEGN- 596
E+STQLL AQLNQ++ + + D+DDE+ ++S D + + +
Sbjct: 453 EKSTQLLEAQLNQVND----DGRSSTPSSDSNDVLSESDDDMDDELSTSSDEDEEVDADV 508
Query: 597 --------TERIGNDMELSVEELRSKYAQLN---KINDFGNETSKSAA---DESIFXXXX 642
TE D L++ +L+ KY N + D N+ K ES
Sbjct: 509 GLENSPASTEATPTDESLNLIQLKEKYGHFNGSSTVYDSRNKDEKFPTLDKHESSSSESS 568
Query: 643 XXXXXXXXXXXXXXXXXXXXXXXXXXXXTP--GLSALLGN--IXXXXXXXXXXXXXXXXX 698
TP GLSAL G
Sbjct: 569 VMTGEESSIYSSSENESQNENDRESDDKTPSVGLSALFGKGEESDGDLDLDDSEDFTVNS 628
Query: 699 XXXXXXXXXXXXAENNSKTEELPSP-PKSDNELKDEKAETTESVTSPAAADPLAVSDVPV 757
+N++ T E + NE +D+ + E + + L+V DVPV
Sbjct: 629 SSVEGEELEKDQVDNSAATFERAGDFVHTQNENRDDIKDVEEDAETKVQEEQLSVVDVPV 688
Query: 758 PSLLRGTLRIYQKQGLNWLASLYNNKTNGILADEMGLGKTIQTISLLAYLACEKENWGPH 817
PSLLRG LR YQKQGLNWLASLYNN TNGILADEMGLGKTIQTISLLAYLACEKENWGPH
Sbjct: 689 PSLLRGNLRTYQKQGLNWLASLYNNHTNGILADEMGLGKTIQTISLLAYLACEKENWGPH 748
Query: 818 LIVVPTSVLLNWEMEFKRFAPGFKVLTYYGSPQQRREKRKGWNKPDAFHVCITSYQLVVH 877
LIVVPTSVLLNWEMEFKRFAPGFKVLTYYGSPQQR+EKRKGWNKPDAFHVCI SYQLVV
Sbjct: 749 LIVVPTSVLLNWEMEFKRFAPGFKVLTYYGSPQQRKEKRKGWNKPDAFHVCIVSYQLVVQ 808
Query: 878 DQHSFKRKKWQYMILDEAHNIKNFRSTRWQALLNFNTERRLLLTGTPLQNNLAELWSLLY 937
DQHSFKRK+WQYM+LDEAHNIKNFRSTRWQALLNFNT+RRLLLTGTPLQNNLAELWSLLY
Sbjct: 809 DQHSFKRKRWQYMVLDEAHNIKNFRSTRWQALLNFNTQRRLLLTGTPLQNNLAELWSLLY 868
Query: 938 FLMPQTALENGKVSGFADLDAFQQWFGRPVDKIVETGENYEQDEETKKTVSKLHQVLRPY 997
FLMPQT ++ KVSGFADLDAFQQWFGRPVDKI+ETG+N+ QD+ETKKTV+KLHQVLRPY
Sbjct: 869 FLMPQTVIDGKKVSGFADLDAFQQWFGRPVDKIIETGQNFGQDKETKKTVAKLHQVLRPY 928
Query: 998 LLRRLKADVEKQMPGKYEHIIYCRLSKRQRFLYDDFMSRAQTKETLASGNFMSIINCLMQ 1057
LLRRLKADVEKQMP KYEHI+YC+LSKRQRFLYDDFMSRAQTK TLASGNFMSI+NCLMQ
Sbjct: 929 LLRRLKADVEKQMPAKYEHIVYCKLSKRQRFLYDDFMSRAQTKATLASGNFMSIVNCLMQ 988
Query: 1058 LRKVCNHPDLFEVRPILTSFCIEDSVSKSYCDLNNYVYNRLHENQFETSVDLSNLNFQFT 1117
LRKVCNHP+LFEVRPILTSF +E V+ Y D+ + +N VDL LN FT
Sbjct: 989 LRKVCNHPNLFEVRPILTSFVLEHCVASDYKDVERTLLKLFKKNNQVNRVDLDFLNLVFT 1048
Query: 1118 SNDKTLSTNHSEKISELQCVQPILKEISRL----KQLNENDSPVTQPDFQDLNQYYSYAK 1173
NDK L++ H+E+IS+L CV+ ++E+++L KQL E + +FQD NQY+ Y+
Sbjct: 1049 LNDKDLTSYHAEEISKLTCVKNFVEEVNKLRETNKQLQEEFGEASFLNFQDANQYFKYSN 1108
Query: 1174 HNKINEIIGQLEHLNYMNNLRCNRRPMYGSNIVKLLTVGPKKFIDCE--LTQESIKPLET 1231
K+ + L L +N LRC+RRP++G N++ LLT + D + E IKPL+T
Sbjct: 1109 KQKLEGTVDMLNFLKMVNKLRCDRRPIFGKNLIDLLTKDRRVKYDKSSIIDNELIKPLQT 1168
Query: 1232 RLLEGKETIEKFAVITPPVVTLDIRERAVGVDDNNKRFEESVKHHLVSQMRSLENPFHQL 1291
R+L+ ++ I+ FAV+TP V+LD+R+ A+G++D++ E+ + ++ + NP HQL
Sbjct: 1169 RVLDNRKIIDTFAVLTPSAVSLDMRKLALGLNDDSS-VGENTRLKVMQNCFEVSNPLHQL 1227
Query: 1292 QTKLSVAFPDKSLLQYDCGXXXXXXXXXXXXXDNGHRALIFTQMTKVLDILEQFLNFHGY 1351
QTKL++AFPDKSLLQYDCG DNGHRALIFTQMTKVLD+LEQFLN+HGY
Sbjct: 1228 QTKLTIAFPDKSLLQYDCGKLQKLAILLQQLKDNGHRALIFTQMTKVLDVLEQFLNYHGY 1287
Query: 1352 LYMRLDGATKIEDRQILTERFNSDPRITVFILSSRSGGLGINLTGADTVIFYDSDWNPAM 1411
LYMRLDGATKIEDRQILTERFN+D RITVFILSSRSGGLGINLTGADTVIFYDSDWNPAM
Sbjct: 1288 LYMRLDGATKIEDRQILTERFNTDSRITVFILSSRSGGLGINLTGADTVIFYDSDWNPAM 1347
Query: 1412 DKQCQDRCHRIGQTRDVHIYRFVSDHTIESNILKKANQKRHLDNVVIQTGDFTTDYFTKL 1471
DKQCQDRCHRIGQTRDVHIYRFVS+HTIESNILKKANQKR LDNVVIQ GDFTTDYF+KL
Sbjct: 1348 DKQCQDRCHRIGQTRDVHIYRFVSEHTIESNILKKANQKRQLDNVVIQEGDFTTDYFSKL 1407
Query: 1472 SVKDLLGAEAPEDIP-DDKPXXXXXXXXX-------XXXXXXXXXXXXXXXXXXXREVNV 1523
SV+DLLG+E PE+ DKP REV +
Sbjct: 1408 SVRDLLGSELPENASGGDKPLIADADVAAKDPRQLERLLAQAEDEDDVKAANLAMREVEI 1467
Query: 1524 DNEDFQEGSVAAQXXXXXXXXXXXXXXXYGGTSHVEEYMVRFIANGFYY 1572
DN+DF E + + Y GT+HV+EYM+RFIANG+YY
Sbjct: 1468 DNDDFDEST--EKKAANEEEENHAELDEYEGTAHVDEYMIRFIANGYYY 1514
Score = 73.9 bits (180), Expect = 2e-12
Identities = 49/118 (41%), Positives = 65/118 (54%), Gaps = 11/118 (9%)
Query: 8 RQLAKTRLEYELLTNELFHLWEFTSLVEYDPLFRNTSNSFKTFLQERGLDVESSLEQ--D 65
+ LA + Y+LLTNELFHL EF SLV+YDP N S SF+ FL+E L +E E+ D
Sbjct: 18 QDLADLKFRYDLLTNELFHLREFVSLVDYDPTHFNDSESFQKFLRETHLSLEERGEKFTD 77
Query: 66 DM--KESNASRRLKRRNVISGTADSSSDKNNIWG-------QVMPLVDQEYSELQEKL 114
D+ K +N +RRN+ + T SS N G + PLV + EL+ KL
Sbjct: 78 DVAKKGTNGDLTRRRRNLRTSTVVSSETTNEKKGDIELKLESIAPLVRNKCEELKYKL 135
>At3g12810 [R] KOG0391 SNF2 family DNA-dependent ATPase
Length = 1048
Score = 681 bits (1756), Expect = 0.0
Identities = 370/787 (47%), Positives = 500/787 (63%), Gaps = 49/787 (6%)
Query: 727 DNELKDEKAETTESVTSPAAADPLAVS------DVPVPSLLRGTLRIYQKQGLNWLASLY 780
DN+ KD + ++ + +A P + +P LL+ +LR YQ GL+WL ++Y
Sbjct: 78 DND-KDSSDKIADAAAAARSAQPTGFTYSTTKVRTKLPFLLKHSLREYQHIGLDWLVTMY 136
Query: 781 NNKTNGILADEMGLGKTIQTISLLAYLACEKENWGPHLIVVPTSVLLNWEMEFKRFAPGF 840
K NGILADEMGLGKTI TI+LLA+LAC+K WGPHLIVVPTSV+LNWE EF ++ P F
Sbjct: 137 EKKLNGILADEMGLGKTIMTIALLAHLACDKGIWGPHLIVVPTSVMLNWETEFLKWCPAF 196
Query: 841 KVLTYYGSPQQRREKRKGWNKPDAFHVCITSYQLVVHDQHSFKRKKWQYMILDEAHNIKN 900
K+LTY+GS ++R+ KR+GW K ++FHVCIT+Y+LV+ D FKRKKW+Y+ILDEAH IKN
Sbjct: 197 KILTYFGSAKERKLKRQGWMKLNSFHVCITTYRLVIQDSKMFKRKKWKYLILDEAHLIKN 256
Query: 901 FRSTRWQALLNFNTERRLLLTGTPLQNNLAELWSLLYFLMPQTALENGKVSGFADLDAFQ 960
++S RWQ LLNFN++RR+LLTGTPLQN+L ELWSL++FLMP F F+
Sbjct: 257 WKSQRWQTLLNFNSKRRILLTGTPLQNDLMELWSLMHFLMPHV---------FQSHQEFK 307
Query: 961 QWFGRPVDKIVETGENYEQDEETKKTVSKLHQVLRPYLLRRLKADVEKQMPGKYEHIIYC 1020
WF P+ +VE Q++ K+ + +LH VLRP+LLRRLK DVEKQ+P K+EH+I+C
Sbjct: 308 DWFCNPIAGMVE-----GQEKINKEVIDRLHNVLRPFLLRRLKRDVEKQLPSKHEHVIFC 362
Query: 1021 RLSKRQRFLYDDFMSRAQTKETLASGNFMSIINCLMQLRKVCNHPDLFEVRPILTSF--- 1077
RLSKRQR LY+DF++ +T+ TL SG+F +I+ +MQLRKVCNHPDLFE RPI++SF
Sbjct: 363 RLSKRQRNLYEDFIASTETQATLTSGSFFGMISIIMQLRKVCNHPDLFEGRPIVSSFDMA 422
Query: 1078 CIEDSVSKSYCDLNNYVYNRLHENQFETSVDLSNLNFQFTSNDKTLSTNHSEKISELQCV 1137
I+ +S + C L L E+ F + VDL L F FT D ++++ ++I +
Sbjct: 423 GIDVQLSSTICSL-------LLESPF-SKVDLEALGFLFTHLDFSMTSWEGDEIKAISTP 474
Query: 1138 QPILKEISRLKQLNEND--SPVTQPDFQDLNQYYSYAK---HNKINEIIGQLEHLNYMNN 1192
++K+ LK E SP + + Q N + K +I E + + + N+
Sbjct: 475 SELIKQRVNLKDDLEAIPLSPKNRKNLQGTNIFEEIRKAVFEERIQESKDRAAAIAWWNS 534
Query: 1193 LRCNRRPMYGSNIVKLLTV-GPKKFIDCE---------LTQESIKPLETRLLEGKETIEK 1242
LRC R+P Y +++ LLT+ GP + L + P+E R + E +E
Sbjct: 535 LRCQRKPTYSTSLRTLLTIKGPLDDLKANCSSYMYSSILADIVLSPIE-RFQKMIELVEA 593
Query: 1243 FAVITPPVVTLDIRERAVGVDDNNKRFEESVKHHLVSQMRSLENPFHQLQTKLSVAFPDK 1302
F P + D+ S K + + L +P + V FPD+
Sbjct: 594 F-TFAIPAARVPSPTCWCSKSDSPVFLSPSYKEKVTDLLSPLLSPIRPAIVRRQVYFPDR 652
Query: 1303 SLLQYDCGXXXXXXXXXXXXXDNGHRALIFTQMTKVLDILEQFLNFHGYLYMRLDGATKI 1362
L+Q+DCG GHRALIFTQMTK+LD+LE F+N +GY YMRLDG+T
Sbjct: 653 RLIQFDCGKLQELAMLLRKLKFGGHRALIFTQMTKMLDVLEAFINLYGYTYMRLDGSTPP 712
Query: 1363 EDRQILTERFNSDPRITVFILSSRSGGLGINLTGADTVIFYDSDWNPAMDKQCQDRCHRI 1422
E+RQ L +RFN++P+I +FILS+RSGG+GINL GADTVIFYDSDWNPAMD+Q QDRCHRI
Sbjct: 713 EERQTLMQRFNTNPKIFLFILSTRSGGVGINLVGADTVIFYDSDWNPAMDQQAQDRCHRI 772
Query: 1423 GQTRDVHIYRFVSDHTIESNILKKANQKRHLDNVVIQTGDFTTDYFTKLSVKDLLGAEAP 1482
GQTR+VHIYR +S+ TIE NILKKANQKR LDN+VIQ G++ T++F KL +L
Sbjct: 773 GQTREVHIYRLISESTIEENILKKANQKRVLDNLVIQNGEYNTEFFKKLDPMELFSGHKA 832
Query: 1483 EDIPDDK 1489
D+K
Sbjct: 833 LTTKDEK 839
>Hs5730067 [R] KOG0391 SNF2 family DNA-dependent ATPase
Length = 2971
Score = 447 bits (1150), Expect = e-125
Identities = 219/372 (58%), Positives = 274/372 (72%), Gaps = 20/372 (5%)
Query: 712 ENNSKTEELPSPPKSDNELKDEKAETTESVTSPAAADP----LAVSDV--PVPSLLRGTL 765
E S+ + PP K E T+ + + P LA + V P+P LLRG L
Sbjct: 362 EEQSEADAGSGPPTPGPTTLGPKKEITDIAAAAESLQPKGYTLATTQVKTPIPLLLRGQL 421
Query: 766 RIYQKQGLNWLASLYNNKTNGILADEMGLGKTIQTISLLAYLACEKENWGPHLIVVPTSV 825
R YQ GL+WL ++Y K NGILADEMGLGKTIQTISLLA+LACEK NWGPHLI+VPTSV
Sbjct: 422 REYQHIGLDWLVTMYEKKLNGILADEMGLGKTIQTISLLAHLACEKGNWGPHLIIVPTSV 481
Query: 826 LLNWEMEFKRFAPGFKVLTYYGSPQQRREKRKGWNKPDAFHVCITSYQLVVHDQHSFKRK 885
+LNWEME KR+ P FK+LTYYG+ ++R+ KR+GW KP+AFHVCITSY+LV+ D +F+RK
Sbjct: 482 MLNWEMELKRWCPSFKILTYYGAQKERKLKRQGWTKPNAFHVCITSYKLVLQDHQAFRRK 541
Query: 886 KWQYMILDEAHNIKNFRSTRWQALLNFNTERRLLLTGTPLQNNLAELWSLLYFLMPQTAL 945
W+Y+ILDEA NIKNF+S RWQ+LLNFN++RRLLLTGTPLQN+L ELWSL++FLMP
Sbjct: 542 NWRYLILDEAQNIKNFKSQRWQSLLNFNSQRRLLLTGTPLQNSLMELWSLMHFLMPHV-- 599
Query: 946 ENGKVSGFADLDAFQQWFGRPVDKIVETGENYEQDEETKKTVSKLHQVLRPYLLRRLKAD 1005
F F++WF P+ ++E + Y + V +LH+VLRP+LLRR+K D
Sbjct: 600 -------FQSHREFKEWFSNPLTGMIEGSQEYNEG-----LVKRLHKVLRPFLLRRVKVD 647
Query: 1006 VEKQMPGKYEHIIYCRLSKRQRFLYDDFMSRAQTKETLASGNFMSIINCLMQLRKVCNHP 1065
VEKQMP KYEH+I CRLSKRQR LYDDFM++ TKETLA+G+FMS+IN LMQLRKVCNHP
Sbjct: 648 VEKQMPKKYEHVIRCRLSKRQRCLYDDFMAQTTTKETLATGHFMSVINILMQLRKVCNHP 707
Query: 1066 DLFEVRPILTSF 1077
+LF+ RP+ + F
Sbjct: 708 NLFDPRPVTSPF 719
Score = 264 bits (675), Expect = 7e-70
Identities = 139/324 (42%), Positives = 194/324 (58%), Gaps = 22/324 (6%)
Query: 1183 QLEHLNYMNNLRCNRRPMYGSNIVKLLT--------VGPKK--------FIDCELTQESI 1226
+LE + ++ P+YG+ ++ T +GP+ + E ++
Sbjct: 1641 RLERIFQLSEAHGALAPVYGTEVLDFCTLPQPVASPIGPRSPGPSHPTFWTYTEAAHRAV 1700
Query: 1227 KPLETRLLEGKETIEKFAVITPPVVTLDIRERAVGVDDNNKRFEESVKHHLVSQMRSLEN 1286
+ RL + E IE+F + PPV A + + + L S++
Sbjct: 1701 LFPQQRLDQLSEIIERFIFVMPPVEAPPPSLHACHPPPWLAPRQAAFQEQLASELWPRAR 1760
Query: 1287 PFHQLQTKLSVAFPDKSLLQYDCGXXXXXXXXXXXXXDNGHRALIFTQMTKVLDILEQFL 1346
P H++ + FPD L+QYDCG GHR LIFTQMT++LD+LEQFL
Sbjct: 1761 PLHRIVCNMRTQFPDLRLIQYDCGKLQTLAVLLRQLKAEGHRVLIFTQMTRMLDVLEQFL 1820
Query: 1347 NFHGYLYMRLDGATKIEDRQILTERFNSDPRITVFILSSRSGGLGINLTGADTVIFYDSD 1406
+HG+LY+RLDG+T++E RQ L ERFN+D RI FILS+RSGG+G+NLTGADTV+FYDSD
Sbjct: 1821 TYHGHLYLRLDGSTRVEQRQALMERFNADKRIFCFILSTRSGGVGVNLTGADTVVFYDSD 1880
Query: 1407 WNPAMDKQCQDRCHRIGQTRDVHIYRFVSDHTIESNILKKANQKRHLDNVVIQTGDFTTD 1466
WNP MD Q QDRCHRIGQTRDVHIYR +S+ T+E NILKKANQKR L ++ I+ G+FTT
Sbjct: 1881 WNPTMDAQAQDRCHRIGQTRDVHIYRLISERTVEENILKKANQKRMLGDMAIEGGNFTTA 1940
Query: 1467 YFTKLSVKDLLGAEAPEDIPDDKP 1490
YF + ++++L D+P ++P
Sbjct: 1941 YFKQQTIRELF------DMPLEEP 1958
>CE25717 [R] KOG0391 SNF2 family DNA-dependent ATPase
Length = 1933
Score = 412 bits (1058), Expect = e-114
Identities = 205/404 (50%), Positives = 270/404 (66%), Gaps = 33/404 (8%)
Query: 756 PVPSLLRGTLRIYQKQGLNWLASLYNNKTNGILADEMGLGKTIQTISLLAYLACEKENWG 815
PVP L+RG LR YQ GL+W+ +LY NGILADEMGLGKTIQTISLLA++AC + WG
Sbjct: 588 PVPFLIRGQLREYQMVGLDWMVTLYEKNLNGILADEMGLGKTIQTISLLAHMACSESIWG 647
Query: 816 PHLIVVPTSVLLNWEMEFKRFAPGFKVLTYYGSPQQRREKRKGWNKPDAFHVCITSYQLV 875
PHLIVVPTSV+LNWEMEFK++ P K+LTY+G+ ++R EKRKGW KP+ FHVCITSY+ V
Sbjct: 648 PHLIVVPTSVILNWEMEFKKWCPALKILTYFGTAKERAEKRKGWMKPNCFHVCITSYKTV 707
Query: 876 VHDQHSFKRKKWQYMILDEAHNIKNFRSTRWQALLNFNTERRLLLTGTPLQNNLAELWSL 935
D +FK++ WQY+ILDEA NIKN++S RWQALLN RRLLLTGTPLQN+L ELWSL
Sbjct: 708 TQDIRAFKQRAWQYLILDEAQNIKNWKSQRWQALLNVRARRRLLLTGTPLQNSLMELWSL 767
Query: 936 LYFLMPQTALENGKVSGFADLDAFQQWFGRPVDKIVETGENYEQDEETKKTVSKLHQVLR 995
++FLMP F+ D F+ WF P+ ++E + + +LH+VLR
Sbjct: 768 MHFLMPTI---------FSSHDDFKDWFSNPLTGMMEGNMEF-----NAPLIGRLHKVLR 813
Query: 996 PYLLRRLKADVEKQMPGKYEHIIYCRLSKRQRFLYDDFMSRAQTKETLASGNFMSIINCL 1055
P++LRRLK +VEKQ+P K EHI+ C LSKRQR+LYDDFMSR TKE L SGN MS++N +
Sbjct: 814 PFILRRLKKEVEKQLPEKTEHIVNCSLSKRQRYLYDDFMSRRSTKENLKSGNMMSVLNIV 873
Query: 1056 MQLRKVCNHPDLFEVRPILTSFCIED---SVSKSYCDLNNYVYNRLHENQFETSVDLSNL 1112
MQLRK CNHP+LFE RP++ F +E V +++ + +Q +LS +
Sbjct: 874 MQLRKCCNHPNLFEPRPVVAPFVVEKLQLDVPARLFEISQQDPSSSSASQIPEIFNLSKI 933
Query: 1113 NFQFTSNDKTLSTNHSEKISELQCVQPILKEISRLKQLNENDSP 1156
+Q S ++ +P+++E+ + E +P
Sbjct: 934 GYQ----------------SSVRSAKPLIEELEAMSTYPEPRAP 961
Score = 226 bits (577), Expect = 2e-58
Identities = 131/322 (40%), Positives = 179/322 (54%), Gaps = 12/322 (3%)
Query: 1221 LTQESIKPLETRLLEGKET-IEKFAVITPPVVT--LDIRERAVGVDDNNKRFEESVKHHL 1277
L E + ++ RLLE E +++F + PV+T R + G+ + +++
Sbjct: 1146 LAVEEDEVVQERLLEYCELLVQRFGMYVEPVLTDAWQCRPSSSGLPSYIRNNLSNIE--- 1202
Query: 1278 VSQMRSLENPFHQLQTKLSVA----FPDKSLLQYDCGXXXXXXXXXXXXXDNGHRALIFT 1333
++ L N T++S++ FP+ L++YDCG HR LIFT
Sbjct: 1203 LNSRSLLLNTSTNFDTRMSISRALQFPELRLIEYDCGKLQTLAVLLRQLYLYKHRCLIFT 1262
Query: 1334 QMTKVLDILEQFLNFHGYLYMRLDGATKIEDRQILTERFNSDPRITVFILSSRSGGLGIN 1393
QM+K+LD+L+ FL+ HGY Y RLDG T +E RQ + ERFN+DP++ FILS+RSGG+G+N
Sbjct: 1263 QMSKMLDVLQTFLSHHGYQYFRLDGTTGVEQRQAMMERFNADPKVFCFILSTRSGGVGVN 1322
Query: 1394 LTGADTVIFYDSDWNPAMDKQCQDRCHRIGQTRDVHIYRFVSDHTIESNILKKANQKRHL 1453
LTGADTVIFYDSDWNP MD Q QDRCHRIGQTR+V IYR +S+ TIE NIL+KA QKR L
Sbjct: 1323 LTGADTVIFYDSDWNPTMDAQAQDRCHRIGQTRNVSIYRLISERTIEENILRKATQKRRL 1382
Query: 1454 DNVVIQTGDFTTDYFTKL-SVKDLLGAEAPE-DIPDDKPXXXXXXXXXXXXXXXXXXXXX 1511
+ I FT ++F + S++DL E E D
Sbjct: 1383 GELAIDEAGFTPEFFKQSDSIRDLFDGENVEVTAVADVATTMSEKEMEVAMAKCEDEADV 1442
Query: 1512 XXXXXXXREVNVDNEDFQEGSV 1533
E NVDN +F E S+
Sbjct: 1443 NAAKIAVAEANVDNAEFDEKSL 1464
>At3g57300 [L] KOG0388 SNF2 family DNA-dependent ATPase
Length = 1496
Score = 290 bits (741), Expect = 2e-77
Identities = 151/330 (45%), Positives = 205/330 (61%), Gaps = 27/330 (8%)
Query: 753 SDVPVPSLLRGTLRIYQKQGLNWLASLYNNKTNGILADEMGLGKTIQTISLLAYLACEKE 812
S V P L +GTL+ YQ +GL WL + Y NGILADEMGLGKTIQ ++ LA+LA EK
Sbjct: 574 STVQTPELFKGTLKEYQMKGLQWLVNCYEQGLNGILADEMGLGKTIQAMAFLAHLAEEKN 633
Query: 813 NWGPHLIVVPTSVLLNWEMEFKRFAPGFKVLTYYGSPQQRREKRKGWN------KPDAFH 866
WGP L+V P SVL NW E RF P K L Y+G Q+R RK N + FH
Sbjct: 634 IWGPFLVVAPASVLNNWADEISRFCPDLKTLPYWGGLQERTILRKNINPKRMYRRDAGFH 693
Query: 867 VCITSYQLVVHDQHSFKRKKWQYMILDEAHNIKNFRSTRWQALLNFNTERRLLLTGTPLQ 926
+ ITSYQL+V D+ F+R KWQYM+LDEA IK+ S RW+ LL+FN RLLLTGTP+Q
Sbjct: 694 ILITSYQLLVTDEKYFRRVKWQYMVLDEAQAIKSSSSIRWKTLLSFNCRNRLLLTGTPIQ 753
Query: 927 NNLAELWSLLYFLMPQTALENGKVSGFADLDAFQQWFGRPVDKIVETGENYEQDEETKKT 986
NN+AELW+LL+F+MP F + D F +WF + ++ E G + +
Sbjct: 754 NNMAELWALLHFIMPML---------FDNHDQFNEWFSKGIENHAEHGGTLNEHQ----- 799
Query: 987 VSKLHQVLRPYLLRRLKADVEKQMPGKYEHIIYCRLSKRQRFLYDDFMSRAQTKETLAS- 1045
+++LH +L+P++LRR+K DV ++ K E ++C+LS RQ+ Y ++ E S
Sbjct: 800 LNRLHAILKPFMLRRVKKDVVSELTTKTEVTVHCKLSSRQQAFYQAIKNKISLAELFDSN 859
Query: 1046 -GNF-----MSIINCLMQLRKVCNHPDLFE 1069
G F ++++N ++QLRKVCNHP+LFE
Sbjct: 860 RGQFTDKKVLNLMNIVIQLRKVCNHPELFE 889
Score = 144 bits (364), Expect = 9e-34
Identities = 84/212 (39%), Positives = 116/212 (54%), Gaps = 17/212 (8%)
Query: 1265 NNKRFEESVKHHLVSQMRS---LENPFHQLQTKLSVAFP-----DKSLLQYDCGXXXXXX 1316
N R S H L+ ++ S + P QL ++ + P D + L D G
Sbjct: 1153 NGPRKPNSFPHPLIQEIDSELPVVQPALQLTHRIFGSCPPMQSFDPAKLLTDSGKLQTLD 1212
Query: 1317 XXXXXXXDNGHRALIFTQMTKVLDILEQFLNFHGYLYMRLDGATKIEDRQILTERFNSDP 1376
HR L+F QMTK+L+ILE ++N+ Y Y+RLDG++ I DR+ + F
Sbjct: 1213 ILLKRLRAGNHRVLLFAQMTKMLNILEDYMNYRKYKYLRLDGSSTIMDRRDMVRDFQHRS 1272
Query: 1377 RITVFILSSRSGGLGINLTGADTVIFYDSDWNPAMDKQCQDRCHRIGQTRDVHIYRFVSD 1436
I VF+LS+R+GGLGINLT ADTVIFY+SDWNP +D Q DR HR+GQT+ D
Sbjct: 1273 DIFVFLLSTRAGGLGINLTAADTVIFYESDWNPTLDLQAMDRAHRLGQTK---------D 1323
Query: 1437 HTIESNILKKANQKRHLDNVVIQTGDFTTDYF 1468
T+E IL +A+QK + +V+ G D F
Sbjct: 1324 ETVEEKILHRASQKNTVQQLVMTGGHVQGDDF 1355
>YGL150c [L] KOG0388 SNF2 family DNA-dependent ATPase
Length = 1489
Score = 289 bits (740), Expect = 2e-77
Identities = 168/442 (38%), Positives = 249/442 (56%), Gaps = 43/442 (9%)
Query: 711 AENNSKTEELPSPPKSDNELKDEKAETTESVTSPAAADPLAVSDVPVPSLLRGTLRIYQK 770
AE +K ++ + E ++E ++ TS L + P +L TL+ YQ
Sbjct: 658 AETRAKAKQFDDHANAHEEEEEEDELNFQNPTS------LGEITIEQPKILACTLKEYQL 711
Query: 771 QGLNWLASLYNNKTNGILADEMGLGKTIQTISLLAYLACEKENWGPHLIVVPTSVLLNWE 830
+GLNWLA+LY+ NGILADEMGLGKT+Q+IS+LA+LA WGP L+V P S L NW
Sbjct: 712 KGLNWLANLYDQGINGILADEMGLGKTVQSISVLAHLAENHNIWGPFLVVTPASTLHNWV 771
Query: 831 MEFKRFAPGFKVLTYYGSPQQRREKRKGW-------NKPDAFHVCITSYQLVVHDQHSFK 883
E +F P FK+L Y+G+ R+ RK W NK FHV +TSYQ+VV D + +
Sbjct: 772 NEISKFLPQFKILPYWGNANDRKVLRKFWDRKNLRYNKNAPFHVMVTSYQMVVTDANYLQ 831
Query: 884 RKKWQYMILDEAHNIKNFRSTRWQALLNFNTERRLLLTGTPLQNNLAELWSLLYFLMPQT 943
+ KWQYMILDEA IK+ +S+RW+ LL+F+ RLLLTGTP+QN++ ELW+LL+F+MP
Sbjct: 832 KMKWQYMILDEAQAIKSSQSSRWKNLLSFHCRNRLLLTGTPIQNSMQELWALLHFIMP-- 889
Query: 944 ALENGKVSGFADLDAFQQWFGRPVDKIVETGENYEQDEETKKTVSKLHQVLRPYLLRRLK 1003
S F D F +WF + ++ E Q + + +LH +L+P++LRR+K
Sbjct: 890 -------SLFDSHDEFNEWFSKDIESHAEANTKLNQQQ-----LRRLHMILKPFMLRRVK 937
Query: 1004 ADVEKQMPGKYEHIIYCRLSKRQRFLYD----------DFMSRAQTKETLA-----SGNF 1048
+V+ ++ K E + C L++RQ LY D + A T ++ + SG+
Sbjct: 938 KNVQSELGDKIEIDVLCDLTQRQAKLYQVLKSQISTNYDAIENAATNDSTSNSASNSGSD 997
Query: 1049 MSIINCLMQLRKVCNHPDLFEVRPILTSFCIEDSVSKSYCDLNNYVYNRLHENQFETSVD 1108
++IN +MQ RKVCNHPDLFE + + F + K+ L V N ++++
Sbjct: 998 QNLINAVMQFRKVCNHPDLFERADVDSPFSF-TTFGKTTSMLTASVANNNSSVISNSNMN 1056
Query: 1109 LSNLNFQFTSNDKTLSTNHSEK 1130
LS+++ SN K +S +
Sbjct: 1057 LSSMSSNNISNGKFTDLIYSSR 1078
Score = 157 bits (396), Expect = 2e-37
Identities = 71/134 (52%), Positives = 100/134 (73%)
Query: 1326 GHRALIFTQMTKVLDILEQFLNFHGYLYMRLDGATKIEDRQILTERFNSDPRITVFILSS 1385
GHR LI+ QMTK++D++E++L + Y ++RLDG++K+EDR+ L + ++P I VF+LS+
Sbjct: 1315 GHRVLIYFQMTKMMDLMEEYLTYRQYNHIRLDGSSKLEDRRDLVHDWQTNPEIFVFLLST 1374
Query: 1386 RSGGLGINLTGADTVIFYDSDWNPAMDKQCQDRCHRIGQTRDVHIYRFVSDHTIESNILK 1445
R+GGLGINLT ADTVIFYDSDWNP +D Q DR HR+GQTR V +YR + TIE +
Sbjct: 1375 RAGGLGINLTAADTVIFYDSDWNPTIDSQAMDRAHRLGQTRQVTVYRLLVRGTIEERMRD 1434
Query: 1446 KANQKRHLDNVVIQ 1459
+A QK + VV++
Sbjct: 1435 RAKQKEQVQQVVME 1448
>Hs15805014 [R] KOG0391 SNF2 family DNA-dependent ATPase
Length = 3124
Score = 287 bits (735), Expect = 8e-77
Identities = 148/388 (38%), Positives = 231/388 (59%), Gaps = 27/388 (6%)
Query: 758 PSLLRGTLRIYQKQGLNWLASLYNNKTNGILADEMGLGKTIQTISLLAYLACEKENWGPH 817
PSLL G LR YQK GL+WLA LY NGILADE GLGKT+Q I+ A+LAC + NWGPH
Sbjct: 1048 PSLLYGALRDYQKIGLDWLAKLYRKNLNGILADEAGLGKTVQIIAFFAHLACNEGNWGPH 1107
Query: 818 LIVVPTSVLLNWEMEFKRFAPGFKVLTYYGSPQQRREKRKGWNKPDAFHVCITSYQLVVH 877
L+VV + +L WE+E KR+ PG K+L+Y GS ++ + KR+ W +P++FHVCITSY
Sbjct: 1108 LVVVRSCNILKWELELKRWCPGLKILSYIGSHRELKAKRQEWAEPNSFHVCITSYTQFFR 1167
Query: 878 DQHSFKRKKWQYMILDEAHNIKNFRSTRWQALLNFNTERRLLLTGTPLQNNLAELWSLLY 937
+F R +W+ +++DE +K W+A+ +++RLLL +PL N ELW++++
Sbjct: 1168 GLTAFTRVRWKCLVIDEMQRVKGMTERHWEAVFTLQSQQRLLLIDSPLHNTFLELWTMVH 1227
Query: 938 FLMPQTALENGKVSGFADLDAFQQWFGRPVDKIVETGENYEQDEETKKTVSKLHQVLRPY 997
FL+P + + + P+ E ++Y K V +LH+V +P+
Sbjct: 1228 FLVPGIS---------------RPYLSSPLRAPSEESQDYYH-----KVVIRLHRVTQPF 1267
Query: 998 LLRRLKADVEKQMPGKYEHIIYCRLSKRQRFLYDDFMSRAQTKETLASGNFMSIINCLMQ 1057
+LRR K DVEKQ+ KYEH++ CRLS RQ+ LY+D + + T+E L SG+F+++++ L++
Sbjct: 1268 ILRRTKRDVEKQLTKKYEHVLKCRLSNRQKALYEDVILQPGTQEALKSGHFVNVLSILVR 1327
Query: 1058 LRKVCNHPDLFEVRPILTSFCIEDSVSKSYCDLNNYVYNRLHENQFETSVDLSNLNFQFT 1117
L+++CNHP L E R +S+ S + + E F DLS F
Sbjct: 1328 LQRICNHPGLVEPRHPGSSYVAGPLEYPSAS-----LILKALERDFWKEADLS--MFDLI 1380
Query: 1118 SNDKTLSTNHSEKISELQCVQPILKEIS 1145
+ ++ + +E +S+ + + +++EIS
Sbjct: 1381 GLENKITRHEAELLSKKKIPRKLMEEIS 1408
Score = 155 bits (393), Expect = 4e-37
Identities = 101/328 (30%), Positives = 156/328 (46%), Gaps = 31/328 (9%)
Query: 1183 QLEHLNYMNNLRCNRRPMYGSNIVKLLTV----------------GPKKFIDCELTQESI 1226
+L+ + +N RC++ P+YG +++++ + G + T S
Sbjct: 1713 RLDQIYLVNERRCSQAPVYGRDLLRICALPSHGRVQWRGSLDGRRGKEAGPAHSYTSSSE 1772
Query: 1227 KPLETRLL------EGKETIEKFAVITPPVV----TLDIRERAVGVDDNNKRFEESVKHH 1276
P E L ++ I++ A + PPVV +L + + + ++ H
Sbjct: 1773 SPSELMLTLCRCGESLQDVIDRVAFVIPPVVAAPPSLRVPRPPPLYSHRMRILRQGLREH 1832
Query: 1277 LVSQMRSLENPFHQLQTKLSVAFPDKSLLQYDCGXXXXXXXXXXXXXDNGHRALIFTQMT 1336
+ L Q + FP+ L+Q+D G G R LI +QM
Sbjct: 1833 AAPYFQQLR----QTTAPRLLQFPELRLVQFDSGKLEALAILLQKLKSEGRRVLILSQMI 1888
Query: 1337 KVLDILEQFLNFHGYLYMRLDGATKIEDRQILTERFNSDPRITVFILSSRSGGLGINLTG 1396
+LDILE FLNFH Y+R+D E RQ L FN D RI ILS+ S GINL
Sbjct: 1889 LMLDILEMFLNFHYLTYVRIDENASSEQRQELMRSFNRDRRIFCAILSTHSRTTGINLVE 1948
Query: 1397 ADTVIFYDSDWNPAMDKQCQDRCHRIGQTRDVHIYRFVSDHTIESNILKKANQKRHLDNV 1456
ADTV+FYD+D NP MD + Q+ C RIG+ +D+HIYR VS ++IE +LK K + V
Sbjct: 1949 ADTVVFYDNDLNPVMDAKAQEWCDRIGRCKDIHIYRLVSGNSIEEKLLKNGT-KDLIREV 2007
Query: 1457 VIQTGDFTTDYFTKLSVKDLLGAEAPED 1484
Q D++ + T+ ++++L +P D
Sbjct: 2008 AAQGNDYSMAFLTQRTIQELFEVYSPMD 2035
>ECU09g1890 [L] KOG0388 SNF2 family DNA-dependent ATPase
Length = 883
Score = 271 bits (694), Expect = 5e-72
Identities = 149/315 (47%), Positives = 202/315 (63%), Gaps = 26/315 (8%)
Query: 755 VPVPSLLRGTLRIYQKQGLNWLASLYNNKTNGILADEMGLGKTIQTISLLAYLACEKENW 814
VP PS+L+ TL+ YQ +GLNWL SLY+ NGILAD+MGLGKT+Q+ISLLA+L +E
Sbjct: 265 VPQPSILKCTLKEYQLRGLNWLVSLYDKGINGILADDMGLGKTVQSISLLAHLYETEEVP 324
Query: 815 GPHLIVVPTSVLLNWEMEFKRFAPGFKVLTYYGSPQQRREKRKGWNKPDAFHVCITSYQL 874
GP L+V +S L NW EF RF P F+V + GSP +R+E +K + D V IT+YQ
Sbjct: 325 GPFLVVTISSTLDNWAQEFARFLPSFRVCRFSGSPSERKELKKRFKNSD---VVITTYQT 381
Query: 875 VVHDQHSFKRKKWQYMILDEAHNIKNFRSTRWQALLNFNTERRLLLTGTPLQNNLAELWS 934
V D+ K+ KWQYMILDEA IK+ S RW+ LL+F RLLLTGTP+QN++ ELW+
Sbjct: 382 AVSDEKMLKKIKWQYMILDEAQAIKSSMSRRWKTLLSFKARNRLLLTGTPIQNSMQELWA 441
Query: 935 LLYFLMPQTALENGKVSGFADLDAFQQWFGRPVDKIVETGENYEQDEETKKTVSKLHQVL 994
LL+F+MP F L+ F WF K +ET ++ + +K++ +LH +L
Sbjct: 442 LLHFIMPTL---------FDSLNEFSDWF----SKEIETSAIMKKTVD-EKSLQRLHAIL 487
Query: 995 RPYLLRRLKADVEKQMPGKYEHIIYCRLSKRQRFLYDDFMSRAQTKETLASGNFMSIINC 1054
+P++LRR K+DV ++ K + +YC LS RQ+ LY KE S + M + N
Sbjct: 488 KPFMLRRHKSDVIHELGQKTQIDLYCDLSYRQKVLY---------KEITRSCSSMEMENL 538
Query: 1055 LMQLRKVCNHPDLFE 1069
LMQL+KVCNHPDLF+
Sbjct: 539 LMQLKKVCNHPDLFK 553
Score = 145 bits (367), Expect = 4e-34
Identities = 76/185 (41%), Positives = 109/185 (58%), Gaps = 3/185 (1%)
Query: 1284 LENPFHQLQTKLSVAFPDKSLLQYDCGXXXXXXXXXXXXXDNGHRALIFTQMTKVLDILE 1343
LEN L T + V P + D G GHR L++ QMT+++D++E
Sbjct: 702 LENRHIPLNTTIYV--PPLNTFISDSGKLVVLDELLPKLKAEGHRLLMYFQMTRMIDLIE 759
Query: 1344 QFLNFHGYLYMRLDGATKIEDRQILTERFNSDPRITVFILSSRSGGLGINLTGADTVIFY 1403
+L GY Y+RLDG+ K R + + + + +F+LS+R+GGLGINLT ADTV+FY
Sbjct: 760 DYLVRKGYTYLRLDGSLKASARAEVIRDWQASDKF-IFLLSTRAGGLGINLTAADTVVFY 818
Query: 1404 DSDWNPAMDKQCQDRCHRIGQTRDVHIYRFVSDHTIESNILKKANQKRHLDNVVIQTGDF 1463
DSDWNP D+Q DR HR+GQTRDV +YR ++ T+E +L+ AN+K + +VI F
Sbjct: 819 DSDWNPTADQQAMDRAHRLGQTRDVTVYRLITRGTVEEKVLESANRKDEIQKMVIHGNIF 878
Query: 1464 TTDYF 1468
+ F
Sbjct: 879 EGENF 883
>7294205 [BK] KOG0386 Chromatin remodeling complex SWI/SNF component SWI2 and
related ATPases (DNA/RNA helicase superfamily)
Length = 1638
Score = 269 bits (687), Expect = 3e-71
Identities = 151/338 (44%), Positives = 203/338 (59%), Gaps = 33/338 (9%)
Query: 760 LLRGTLRIYQKQGLNWLASLYNNKTNGILADEMGLGKTIQTISLLAYLACEKENWGPHLI 819
++ GTL+ YQ +GL WL SLYNN NGILADEMGLGKTIQTISL+ YL K+ GP+LI
Sbjct: 768 MVNGTLKEYQIKGLEWLVSLYNNNLNGILADEMGLGKTIQTISLVTYLMDRKKVMGPYLI 827
Query: 820 VVPTSVLLNWEMEFKRFAPGFKVLTYYGSPQQRREKRKGWNKPDAFHVCITSYQLVVHDQ 879
+VP S L NW +EF+++AP V++Y GSPQ RR + + F+V +T+Y+ V+ D+
Sbjct: 828 IVPLSTLPNWVLEFEKWAPAVGVVSYKGSPQGRR-LLQNQMRATKFNVLLTTYEYVIKDK 886
Query: 880 HSFKRKKWQYMILDEAHNIKNFRSTRWQAL-LNFNTERRLLLTGTPLQNNLAELWSLLYF 938
+ +W+YMI+DE H +KN Q L ++ RLLLTGTPLQN L ELW+LL F
Sbjct: 887 AVLAKIQWKYMIIDEGHRMKNHHCKLTQVLNTHYIAPYRLLLTGTPLQNKLPELWALLNF 946
Query: 939 LMPQTALENGKVSGFADLDAFQQWFGRPVDKIVETGENYE-QDEETKKTVSKLHQVLRPY 997
L+P S F F+QWF P TGE E +EET + +LH+VLRP+
Sbjct: 947 LLP---------SIFKSCSTFEQWFNAP---FATTGEKVELNEEETILIIRRLHKVLRPF 994
Query: 998 LLRRLKADVEKQMPGKYEHIIYCRLSKRQRFLYDDFMSR------AQTKETLASGNFMSI 1051
LLRRLK +VE Q+P K E+II C +S QR LY S+ K G ++
Sbjct: 995 LLRRLKKEVEHQLPDKVEYIIKCDMSALQRVLYKHMQSKGVLLTDGSEKGKHGKGGAKAL 1054
Query: 1052 INCLMQLRKVCNHPDLFEVRPILTSFCIEDSVSKSYCD 1089
+N ++QLRK+CNHP +F+ + + YCD
Sbjct: 1055 MNTIVQLRKLCNHPFMFQ------------HIEEKYCD 1080
Score = 138 bits (347), Expect = 8e-32
Identities = 72/172 (41%), Positives = 104/172 (59%), Gaps = 9/172 (5%)
Query: 1327 HRALIFTQMTKVLDILEQFLNFHGYLYMRLDGATKIEDRQILTERFNSDPR-ITVFILSS 1385
HR L+F QMT+ + I+E +L + + Y+RLDG TK EDR L +FN+ + VF+LS+
Sbjct: 1115 HRVLLFCQMTQCMTIIEDYLGWRQFGYLRLDGTTKAEDRGELLRKFNAKGSDVFVFLLST 1174
Query: 1386 RSGGLGINLTGADTVIFYDSDWNPAMDKQCQDRCHRIGQTRDVHIYRFVSDHTIESNILK 1445
R+GGLG+NL ADTV+ +DSDWNP D Q QDR HRIGQ +V + R ++ +++E IL
Sbjct: 1175 RAGGLGLNLQTADTVVIFDSDWNPHQDLQAQDRAHRIGQRNEVRVLRLMTVNSVEERILA 1234
Query: 1446 KANQKRHLDNVVIQTGDF--------TTDYFTKLSVKDLLGAEAPEDIPDDK 1489
A K ++D VIQ G F + + +D E ++PDD+
Sbjct: 1235 AARYKLNMDEKVIQAGMFDQKSTGSERQQFLQTILHQDDNEEEEENEVPDDE 1286
>Hs21071050 [BK] KOG0386 Chromatin remodeling complex SWI/SNF component SWI2 and
related ATPases (DNA/RNA helicase superfamily)
Length = 1568
Score = 266 bits (680), Expect = 2e-70
Identities = 143/322 (44%), Positives = 196/322 (60%), Gaps = 29/322 (9%)
Query: 760 LLRGTLRIYQKQGLNWLASLYNNKTNGILADEMGLGKTIQTISLLAYLACEKENWGPHLI 819
L+ GTL+ YQ QGL W+ SLYNN NGILADEMGLGKTIQTI+L+ YL K GP+LI
Sbjct: 715 LINGTLKHYQLQGLEWMVSLYNNNLNGILADEMGLGKTIQTIALITYLMEHKRLNGPYLI 774
Query: 820 VVPTSVLLNWEMEFKRFAPGFKVLTYYGSPQQRR----EKRKGWNKPDAFHVCITSYQLV 875
+VP S L NW EF ++AP ++Y G+P RR + R G F+V +T+Y+ +
Sbjct: 775 IVPLSTLSNWTYEFDKWAPSVVKISYKGTPAMRRSLVPQLRSG-----KFNVLLTTYEYI 829
Query: 876 VHDQHSFKRKKWQYMILDEAHNIKNFRSTRWQAL-LNFNTERRLLLTGTPLQNNLAELWS 934
+ D+H + +W+YMI+DE H +KN Q L ++ RR+LLTGTPLQN L ELW+
Sbjct: 830 IKDKHILAKIRWKYMIVDEGHRMKNHHCKLTQVLNTHYVAPRRILLTGTPLQNKLPELWA 889
Query: 935 LLYFLMPQTALENGKVSGFADLDAFQQWFGRPVDKIVETGENYE-QDEETKKTVSKLHQV 993
LL FL+P F F+QWF P TGE + +EET + +LH+V
Sbjct: 890 LLNFLLPTI---------FKSCSTFEQWFNAP---FAMTGERVDLNEEETILIIRRLHKV 937
Query: 994 LRPYLLRRLKADVEKQMPGKYEHIIYCRLSKRQRFLYDDFMSR------AQTKETLASGN 1047
LRP+LLRRLK +VE Q+P K E++I C +S Q+ LY ++ K+ G
Sbjct: 938 LRPFLLRRLKKEVESQLPEKVEYVIKCDMSALQKILYRHMQAKGILLTDGSEKDKKGKGG 997
Query: 1048 FMSIINCLMQLRKVCNHPDLFE 1069
+++N +MQLRK+CNHP +F+
Sbjct: 998 AKTLMNTIMQLRKICNHPYMFQ 1019
Score = 141 bits (356), Expect = 7e-33
Identities = 72/171 (42%), Positives = 108/171 (63%), Gaps = 8/171 (4%)
Query: 1327 HRALIFTQMTKVLDILEQFLNFHGYLYMRLDGATKIEDRQILTERFNSD-PRITVFILSS 1385
HR L+F QMT ++ I+E + F +LY+RLDG TK EDR L ++FN + +F+LS+
Sbjct: 1063 HRVLLFCQMTSLMTIMEDYFAFRNFLYLRLDGTTKSEDRAALLKKFNEPGSQYFIFLLST 1122
Query: 1386 RSGGLGINLTGADTVIFYDSDWNPAMDKQCQDRCHRIGQTRDVHIYRFVSDHTIESNILK 1445
R+GGLG+NL ADTV+ +DSDWNP D Q QDR HRIGQ +V + R + +++E IL
Sbjct: 1123 RAGGLGLNLQAADTVVIFDSDWNPHQDLQAQDRAHRIGQQNEVRVLRLCTVNSVEEKILA 1182
Query: 1446 KANQKRHLDNVVIQTGDF---TTDYFTKLSVKDLL----GAEAPEDIPDDK 1489
A K ++D VIQ G F ++ + + ++ +L E +++PDD+
Sbjct: 1183 AAKYKLNVDQKVIQAGMFDQKSSSHERRAFLQAILEHEEENEEEDEVPDDE 1233
>Hs21071048 [BK] KOG0386 Chromatin remodeling complex SWI/SNF component SWI2 and
related ATPases (DNA/RNA helicase superfamily)
Length = 1586
Score = 266 bits (680), Expect = 2e-70
Identities = 143/322 (44%), Positives = 196/322 (60%), Gaps = 29/322 (9%)
Query: 760 LLRGTLRIYQKQGLNWLASLYNNKTNGILADEMGLGKTIQTISLLAYLACEKENWGPHLI 819
L+ GTL+ YQ QGL W+ SLYNN NGILADEMGLGKTIQTI+L+ YL K GP+LI
Sbjct: 715 LINGTLKHYQLQGLEWMVSLYNNNLNGILADEMGLGKTIQTIALITYLMEHKRLNGPYLI 774
Query: 820 VVPTSVLLNWEMEFKRFAPGFKVLTYYGSPQQRR----EKRKGWNKPDAFHVCITSYQLV 875
+VP S L NW EF ++AP ++Y G+P RR + R G F+V +T+Y+ +
Sbjct: 775 IVPLSTLSNWTYEFDKWAPSVVKISYKGTPAMRRSLVPQLRSG-----KFNVLLTTYEYI 829
Query: 876 VHDQHSFKRKKWQYMILDEAHNIKNFRSTRWQAL-LNFNTERRLLLTGTPLQNNLAELWS 934
+ D+H + +W+YMI+DE H +KN Q L ++ RR+LLTGTPLQN L ELW+
Sbjct: 830 IKDKHILAKIRWKYMIVDEGHRMKNHHCKLTQVLNTHYVAPRRILLTGTPLQNKLPELWA 889
Query: 935 LLYFLMPQTALENGKVSGFADLDAFQQWFGRPVDKIVETGENYE-QDEETKKTVSKLHQV 993
LL FL+P F F+QWF P TGE + +EET + +LH+V
Sbjct: 890 LLNFLLPTI---------FKSCSTFEQWFNAP---FAMTGERVDLNEEETILIIRRLHKV 937
Query: 994 LRPYLLRRLKADVEKQMPGKYEHIIYCRLSKRQRFLYDDFMSR------AQTKETLASGN 1047
LRP+LLRRLK +VE Q+P K E++I C +S Q+ LY ++ K+ G
Sbjct: 938 LRPFLLRRLKKEVESQLPEKVEYVIKCDMSALQKILYRHMQAKGILLTDGSEKDKKGKGG 997
Query: 1048 FMSIINCLMQLRKVCNHPDLFE 1069
+++N +MQLRK+CNHP +F+
Sbjct: 998 AKTLMNTIMQLRKICNHPYMFQ 1019
Score = 141 bits (356), Expect = 7e-33
Identities = 72/171 (42%), Positives = 108/171 (63%), Gaps = 8/171 (4%)
Query: 1327 HRALIFTQMTKVLDILEQFLNFHGYLYMRLDGATKIEDRQILTERFNSD-PRITVFILSS 1385
HR L+F QMT ++ I+E + F +LY+RLDG TK EDR L ++FN + +F+LS+
Sbjct: 1063 HRVLLFCQMTSLMTIMEDYFAFRNFLYLRLDGTTKSEDRAALLKKFNEPGSQYFIFLLST 1122
Query: 1386 RSGGLGINLTGADTVIFYDSDWNPAMDKQCQDRCHRIGQTRDVHIYRFVSDHTIESNILK 1445
R+GGLG+NL ADTV+ +DSDWNP D Q QDR HRIGQ +V + R + +++E IL
Sbjct: 1123 RAGGLGLNLQAADTVVIFDSDWNPHQDLQAQDRAHRIGQQNEVRVLRLCTVNSVEEKILA 1182
Query: 1446 KANQKRHLDNVVIQTGDF---TTDYFTKLSVKDLL----GAEAPEDIPDDK 1489
A K ++D VIQ G F ++ + + ++ +L E +++PDD+
Sbjct: 1183 AAKYKLNVDQKVIQAGMFDQKSSSHERRAFLQAILEHEEENEEEDEVPDDE 1233
>Hs21071056 [BK] KOG0386 Chromatin remodeling complex SWI/SNF component SWI2 and
related ATPases (DNA/RNA helicase superfamily)
Length = 1647
Score = 262 bits (670), Expect = 3e-69
Identities = 144/322 (44%), Positives = 194/322 (59%), Gaps = 29/322 (9%)
Query: 760 LLRGTLRIYQKQGLNWLASLYNNKTNGILADEMGLGKTIQTISLLAYLACEKENWGPHLI 819
++ G L+ YQ +GL WL SLYNN NGILADEMGLGKTIQTI+L+ YL K GP LI
Sbjct: 749 MVNGVLKQYQIKGLEWLVSLYNNNLNGILADEMGLGKTIQTIALITYLMEHKRINGPFLI 808
Query: 820 VVPTSVLLNWEMEFKRFAPGFKVLTYYGSPQQRR----EKRKGWNKPDAFHVCITSYQLV 875
+VP S L NW EF ++AP ++Y GSP RR + R G F+V +T+Y+ +
Sbjct: 809 IVPLSTLSNWAYEFDKWAPSVVKVSYKGSPAARRAFVPQLRSG-----KFNVLLTTYEYI 863
Query: 876 VHDQHSFKRKKWQYMILDEAHNIKNFRSTRWQAL-LNFNTERRLLLTGTPLQNNLAELWS 934
+ D+H + +W+YMI+DE H +KN Q L ++ RRLLLTGTPLQN L ELW+
Sbjct: 864 IKDKHILAKIRWKYMIVDEGHRMKNHHCKLTQVLNTHYVAPRRLLLTGTPLQNKLPELWA 923
Query: 935 LLYFLMPQTALENGKVSGFADLDAFQQWFGRPVDKIVETGENYE-QDEETKKTVSKLHQV 993
LL FL+P F F+QWF P TGE + +EET + +LH+V
Sbjct: 924 LLNFLLPTI---------FKSCSTFEQWFNAP---FAMTGEKVDLNEEETILIIRRLHKV 971
Query: 994 LRPYLLRRLKADVEKQMPGKYEHIIYCRLSKRQRFLYDDFMSR------AQTKETLASGN 1047
LRP+LLRRLK +VE Q+P K E++I C +S QR LY ++ K+ G
Sbjct: 972 LRPFLLRRLKKEVEAQLPEKVEYVIKCDMSALQRVLYRHMQAKGVLLTDGSEKDKKGKGG 1031
Query: 1048 FMSIINCLMQLRKVCNHPDLFE 1069
+++N +MQLRK+CNHP +F+
Sbjct: 1032 TKTLMNTIMQLRKICNHPYMFQ 1053
Score = 138 bits (347), Expect = 8e-32
Identities = 66/138 (47%), Positives = 91/138 (65%), Gaps = 1/138 (0%)
Query: 1327 HRALIFTQMTKVLDILEQFLNFHGYLYMRLDGATKIEDRQILTERFNSD-PRITVFILSS 1385
H+ L+F QMT ++ I+E + + G+ Y+RLDG TK EDR +L + FN +F+LS+
Sbjct: 1097 HKVLLFCQMTSLMTIMEDYFAYRGFKYLRLDGTTKAEDRGMLLKTFNEPGSEYFIFLLST 1156
Query: 1386 RSGGLGINLTGADTVIFYDSDWNPAMDKQCQDRCHRIGQTRDVHIYRFVSDHTIESNILK 1445
R+GGLG+NL ADTVI +DSDWNP D Q QDR HRIGQ +V + R + +++E IL
Sbjct: 1157 RAGGLGLNLQSADTVIIFDSDWNPHQDLQAQDRAHRIGQQNEVRVLRLCTVNSVEEKILA 1216
Query: 1446 KANQKRHLDNVVIQTGDF 1463
A K ++D VIQ G F
Sbjct: 1217 AAKYKLNVDQKVIQAGMF 1234
>7300511 [L] KOG0388 SNF2 family DNA-dependent ATPase
Length = 1477
Score = 262 bits (669), Expect = 4e-69
Identities = 144/374 (38%), Positives = 218/374 (57%), Gaps = 55/374 (14%)
Query: 731 KDEKAETTESVTSPAAADPLAVSDVPVPSLLRGTLRIYQKQGLNWLASLYNNKTNGILAD 790
K+E+ + ESV + D+P P + +GTL+ YQ +G+ WLA++Y+ +GILAD
Sbjct: 501 KEEEEQAQESVEDIKPEPRPEMKDLPQPKMFKGTLKGYQIKGMTWLANIYDQGISGILAD 560
Query: 791 EMGLGKTIQTISLLAYLACEKENWGPHLIVVPTSVLLNWEMEFKRFAPGFKVLTYYGSPQ 850
EMGLGKT+Q+I+ L ++A E++G F P FKV+ Y+GSP
Sbjct: 561 EMGLGKTVQSIAFLCHIA---EHYGV-------------------FVPDFKVVPYWGSPA 598
Query: 851 QRREKRKGWNKPD------AFHVCITSYQLVVHDQHSFKRKKWQYMILDEAHNIKNFRST 904
+R+ R+ W++ +FHV ITSYQLVV D F R KWQYM+LDEA IK+ S
Sbjct: 599 ERKILRQFWDQKHLHTRDASFHVVITSYQLVVSDYKYFNRIKWQYMVLDEAQAIKSAASQ 658
Query: 905 RWQALLNFNTERRLLLTGTPLQNNLAELWSLLYFLMPQTALENGKVSGFADLDAFQQWFG 964
RW+ LL F+ RLLL+GTP+QN++AELW+LL+F+MP F D F +WF
Sbjct: 659 RWKLLLGFSCRNRLLLSGTPIQNSMAELWALLHFIMPTL---------FDSHDEFNEWFS 709
Query: 965 RPVDKIVETGENYEQDEETKKTVSKLHQVLRPYLLRRLKADVEKQMPGKYEHIIYCRLSK 1024
+ ++ E ++ K +S+LH +L+P++LRR+K DVE ++ K E ++YC L+
Sbjct: 710 KDIESHAENKTGIDE-----KQISRLHMILKPFMLRRIKKDVENELSDKIEIMVYCPLTI 764
Query: 1025 RQRFLYDDFMSRAQTKE----------TLASGNFMSIINCLMQLRKVCNHPDLFEVRPIL 1074
RQ+ LY + + ++ T +S + +++N +MQ RKVCNHP+LFE R
Sbjct: 765 RQKLLYRALKQKIRIEDLLHLTSGSTTTSSSSSASNLMNLVMQFRKVCNHPELFERRDAR 824
Query: 1075 TSF---CIEDSVSK 1085
+ F C E ++ +
Sbjct: 825 SPFFMRCAEYTIPR 838
Score = 92.8 bits (229), Expect = 4e-18
Identities = 47/105 (44%), Positives = 66/105 (62%)
Query: 1296 SVAFPDKSLLQYDCGXXXXXXXXXXXXXDNGHRALIFTQMTKVLDILEQFLNFHGYLYMR 1355
S+ PDK L D G NGHR LI++QMTK++D+LE+++ + YMR
Sbjct: 1073 SIVVPDKETLITDAGKLFVLDNLLTRLKANGHRVLIYSQMTKMIDLLEEYMWHRKHRYMR 1132
Query: 1356 LDGATKIEDRQILTERFNSDPRITVFILSSRSGGLGINLTGADTV 1400
LDG++KI R+ + F + I VF+LS+R+GGLGINLT ADT+
Sbjct: 1133 LDGSSKISARRDMVADFQTRADIFVFLLSTRAGGLGINLTAADTL 1177
>Hs21071058 [K] KOG0385 Chromatin remodeling complex WSTF-ISWI small subunit
Length = 1052
Score = 261 bits (667), Expect = 6e-69
Identities = 151/341 (44%), Positives = 197/341 (57%), Gaps = 23/341 (6%)
Query: 731 KDEKAETTESVTSPAAADPLAVSDVPVPSLLR-GTLRIYQKQGLNWLASLYNNKTNGILA 789
+ E+ E E +T + A + PS ++ G LR YQ +GLNWL SLY N NGILA
Sbjct: 145 RTEQEEDEELLTESSKATNVCTRFEDSPSYVKWGKLRDYQVRGLNWLISLYENGINGILA 204
Query: 790 DEMGLGKTIQTISLLAYLACEKENWGPHLIVVPTSVLLNWEMEFKRFAPGFKVLTYYGSP 849
DEMGLGKT+QTISLL Y+ + GPH+++VP S L NW EFKR+ P + + G
Sbjct: 205 DEMGLGKTLQTISLLGYMKHYRNIPGPHMVLVPKSTLHNWMSEFKRWVPTLRSVCLIGDK 264
Query: 850 QQRREKRKGWNKPDAFHVCITSYQLVVHDQHSFKRKKWQYMILDEAHNIKNFRSTRWQAL 909
+QR + P + VC+TSY++++ ++ FK+ W+Y+++DEAH IKN +S + +
Sbjct: 265 EQRAAFVRDVLLPGEWDVCVTSYEMLIKEKSVFKKFNWRYLVIDEAHRIKNEKSKLSEIV 324
Query: 910 LNFNTERRLLLTGTPLQNNLAELWSLLYFLMPQTALENGKVSGFADLDAFQQWFGRPVDK 969
F T RLLLTGTPLQNNL ELWSLL FL+P F D F WF
Sbjct: 325 REFKTTNRLLLTGTPLQNNLHELWSLLNFLLPDV---------FNSADDFDSWFDT---- 371
Query: 970 IVETGENYEQDEETKKTVSKLHQVLRPYLLRRLKADVEKQMPGKYEHIIYCRLSKRQRFL 1029
N D+ K V +LH VLRP+LLRR+KADVEK +P K E IY LSK QR
Sbjct: 372 -----NNCLGDQ---KLVERLHMVLRPFLLRRIKADVEKSLPPKKEVKIYVGLSKMQREW 423
Query: 1030 YDD-FMSRAQTKETLASGNFMSIINCLMQLRKVCNHPDLFE 1069
Y M + + M ++N LMQLRK CNHP LF+
Sbjct: 424 YTRILMKDIDILNSAGKMDKMRLLNILMQLRKCCNHPYLFD 464
Score = 152 bits (384), Expect = 4e-36
Identities = 76/156 (48%), Positives = 104/156 (65%), Gaps = 3/156 (1%)
Query: 1324 DNGHRALIFTQMTKVLDILEQFLNFHGYLYMRLDGATKIEDRQILTERFNSDPRIT--VF 1381
+ G R LIF+QMT+VLDILE + + Y Y RLDG T ++RQ +N +P T VF
Sbjct: 497 EQGSRVLIFSQMTRVLDILEDYCMWRNYEYCRLDGQTPHDERQDSINAYN-EPNSTKFVF 555
Query: 1382 ILSSRSGGLGINLTGADTVIFYDSDWNPAMDKQCQDRCHRIGQTRDVHIYRFVSDHTIES 1441
+LS+R+GGLGINL AD VI YDSDWNP +D Q DR HRIGQT+ V ++RF++D+T+E
Sbjct: 556 MLSTRAGGLGINLATADVVILYDSDWNPQVDLQAMDRAHRIGQTKTVRVFRFITDNTVEE 615
Query: 1442 NILKKANQKRHLDNVVIQTGDFTTDYFTKLSVKDLL 1477
I+++A K LD++VIQ G K+ ++L
Sbjct: 616 RIVERAEMKLRLDSIVIQQGRLVDQNLNKIGKDEML 651
>At3g06400 [K] KOG0385 Chromatin remodeling complex WSTF-ISWI small subunit
Length = 1057
Score = 259 bits (661), Expect = 3e-68
Identities = 138/312 (44%), Positives = 194/312 (61%), Gaps = 22/312 (7%)
Query: 758 PSLLRGTLRIYQKQGLNWLASLYNNKTNGILADEMGLGKTIQTISLLAYLACEKENWGPH 817
PS ++G +R YQ GLNWL LY N NGILADEMGLGKT+QTISLLAYL + GPH
Sbjct: 182 PSCIQGKMRDYQLAGLNWLIRLYENGINGILADEMGLGKTLQTISLLAYLHEYRGINGPH 241
Query: 818 LIVVPTSVLLNWEMEFKRFAPGFKVLTYYGSPQQRREKRKGWNKPDAFHVCITSYQLVVH 877
++V P S L NW E +RF P + + + G+P++RR R+ F +C+TS+++ +
Sbjct: 242 MVVAPKSTLGNWMNEIRRFCPVLRAVKFLGNPEERRHIREDLLVAGKFDICVTSFEMAIK 301
Query: 878 DQHSFKRKKWQYMILDEAHNIKNFRSTRWQALLNFNTERRLLLTGTPLQNNLAELWSLLY 937
++ + +R W+Y+I+DEAH IKN S + + F+T RLL+TGTPLQNNL ELW+LL
Sbjct: 302 EKTALRRFSWRYIIIDEAHRIKNENSLLSKTMRLFSTNYRLLITGTPLQNNLHELWALLN 361
Query: 938 FLMPQTALENGKVSGFADLDAFQQWFGRPVDKIVETGENYEQDEETKKTVSKLHQVLRPY 997
FL+P+ F+ + F +WF +GEN +Q+ V +LH+VLRP+
Sbjct: 362 FLLPEI---------FSSAETFDEWF-------QISGENDQQE-----VVQQLHKVLRPF 400
Query: 998 LLRRLKADVEKQMPGKYEHIIYCRLSKRQRFLYDDFMSRAQTKETLASGNFMSIINCLMQ 1057
LLRRLK+DVEK +P K E I+ +S+ Q+ Y + + + A G ++N MQ
Sbjct: 401 LLRRLKSDVEKGLPPKKETILKVGMSQMQKQYYKALLQK-DLEAVNAGGERKRLLNIAMQ 459
Query: 1058 LRKVCNHPDLFE 1069
LRK CNHP LF+
Sbjct: 460 LRKCCNHPYLFQ 471
Score = 143 bits (360), Expect = 2e-33
Identities = 72/151 (47%), Positives = 100/151 (65%), Gaps = 1/151 (0%)
Query: 1328 RALIFTQMTKVLDILEQFLNFHGYLYMRLDGATKIEDRQILTERFNSD-PRITVFILSSR 1386
R LIF+QMT++LDILE +L + GYLY R+DG T ++R E +N VF+LS+R
Sbjct: 508 RVLIFSQMTRLLDILEDYLMYRGYLYCRIDGNTGGDERDASIEAYNKPGSEKFVFLLSTR 567
Query: 1387 SGGLGINLTGADTVIFYDSDWNPAMDKQCQDRCHRIGQTRDVHIYRFVSDHTIESNILKK 1446
+GGLGINL AD VI YDSDWNP +D Q QDR HRIGQ ++V ++RF ++ IE ++++
Sbjct: 568 AGGLGINLATADVVILYDSDWNPQVDLQAQDRAHRIGQKKEVQVFRFCTESAIEEKVIER 627
Query: 1447 ANQKRHLDNVVIQTGDFTTDYFTKLSVKDLL 1477
A +K LD +VIQ G ++ +LL
Sbjct: 628 AYKKLALDALVIQQGRLAEQKSKSVNKDELL 658
>CE05553 [BK] KOG0386 Chromatin remodeling complex SWI/SNF component SWI2 and
related ATPases (DNA/RNA helicase superfamily)
Length = 1474
Score = 257 bits (657), Expect = 9e-68
Identities = 143/314 (45%), Positives = 198/314 (62%), Gaps = 21/314 (6%)
Query: 758 PSLLRGTLRIYQKQGLNWLASLYNNKTNGILADEMGLGKTIQTISLLAYLACEKENWGPH 817
P+LL L+ YQ +GL W+ SLYNN NGILADEMGLGKTIQTISL+ YL K+N GP+
Sbjct: 529 PNLL---LKPYQIKGLEWMVSLYNNNLNGILADEMGLGKTIQTISLVTYLMEVKQNNGPY 585
Query: 818 LIVVPTSVLLNWEMEFKRFAPGFKVLTYYGSPQQRREKRKGWNKPDAFHVCITSYQLVVH 877
L++VP S L NW+ EF ++AP + Y G+ RR + +G + AF+V +T+Y+ V+
Sbjct: 586 LVIVPLSTLSNWQNEFAKWAPSVTTIIYKGTKDARR-RVEGQIRKGAFNVLMTTYEYVIK 644
Query: 878 DQHSFKRKKWQYMILDEAHNIKNFRSTRWQALLN--FNTERRLLLTGTPLQNNLAELWSL 935
++ + +W+YMI+DE H +KN + + +LN F+ + RLLLTGTPLQN L ELW+L
Sbjct: 645 EKALLGKIRWKYMIIDEGHRLKN-HNCKLTLMLNGFFHAQHRLLLTGTPLQNKLPELWAL 703
Query: 936 LYFLMPQTALENGKVSGFADLDAFQQWFGRPVDKIVETGENYE-QDEETKKTVSKLHQVL 994
L FL+P S F+ F+QWF P TGE E EET + +LH+VL
Sbjct: 704 LNFLLP---------SIFSSCGTFEQWFNAP---FATTGEKVELNQEETMLIIRRLHKVL 751
Query: 995 RPYLLRRLKADVEKQMPGKYEHIIYCRLSKRQRFLYDDFMSRAQTKETLASGNFMSIINC 1054
RP+LLRRLK +VE Q+P K E++I C S Q+ +Y M + + S S++N
Sbjct: 752 RPFLLRRLKKEVESQLPDKTEYVIKCDQSALQKVIY-RHMQKGLLLDAKMSSGARSLMNT 810
Query: 1055 LMQLRKVCNHPDLF 1068
++ LRK+CNHP LF
Sbjct: 811 VVHLRKLCNHPFLF 824
Score = 150 bits (378), Expect = 2e-35
Identities = 78/172 (45%), Positives = 114/172 (65%), Gaps = 8/172 (4%)
Query: 1326 GHRALIFTQMTKVLDILEQFLNFHGYLYMRLDGATKIEDRQILTERFNS-DPRITVFILS 1384
GHR L+F QMT +++I E FLNF Y Y+RLDG+TK ++R L +FN+ + + +F+LS
Sbjct: 866 GHRILMFFQMTSMMNIFEDFLNFRRYTYLRLDGSTKPDERGDLLTQFNAPNSDLFLFMLS 925
Query: 1385 SRSGGLGINLTGADTVIFYDSDWNPAMDKQCQDRCHRIGQTRDVHIYRFVSDHTIESNIL 1444
+R+GGLG+NL ADTVI +DSDWNP D Q QDR HRIGQ ++V + R ++ +++E IL
Sbjct: 926 TRAGGLGLNLQTADTVIIFDSDWNPHQDMQAQDRAHRIGQKKEVRVLRLITANSVEEKIL 985
Query: 1445 KKANQKRHLDNVVIQTGDF---TTDYFTKLSVKDLLGA----EAPEDIPDDK 1489
A K ++D VIQ G F +T K ++ ++ A E E++PDD+
Sbjct: 986 AAARYKLNVDEKVIQAGKFDQRSTGAERKQMLEQIIQADGEEEEEEEVPDDE 1037
>At5g18620 [K] KOG0385 Chromatin remodeling complex WSTF-ISWI small subunit
Length = 1063
Score = 256 bits (655), Expect = 2e-67
Identities = 137/312 (43%), Positives = 193/312 (60%), Gaps = 22/312 (7%)
Query: 758 PSLLRGTLRIYQKQGLNWLASLYNNKTNGILADEMGLGKTIQTISLLAYLACEKENWGPH 817
P+ ++G LR YQ GLNWL LY N NGILADEMGLGKT+QTISLLAYL + GPH
Sbjct: 174 PACIQGKLRDYQLAGLNWLIRLYENGINGILADEMGLGKTLQTISLLAYLHEYRGINGPH 233
Query: 818 LIVVPTSVLLNWEMEFKRFAPGFKVLTYYGSPQQRREKRKGWNKPDAFHVCITSYQLVVH 877
++V P S L NW E +RF P + + + G+P++RR R+ F +C+TS+++ +
Sbjct: 234 MVVAPKSTLGNWMNEIRRFCPVLRAVKFLGNPEERRHIREELLVAGKFDICVTSFEMAIK 293
Query: 878 DQHSFKRKKWQYMILDEAHNIKNFRSTRWQALLNFNTERRLLLTGTPLQNNLAELWSLLY 937
++ + +R W+Y+I+DEAH IKN S + + F+T RLL+TGTPLQNNL ELW+LL
Sbjct: 294 EKTTLRRFSWRYIIIDEAHRIKNENSLLSKTMRLFSTNYRLLITGTPLQNNLHELWALLN 353
Query: 938 FLMPQTALENGKVSGFADLDAFQQWFGRPVDKIVETGENYEQDEETKKTVSKLHQVLRPY 997
FL+P+ F+ + F +WF +GEN +Q+ V +LH+VLRP+
Sbjct: 354 FLLPEV---------FSSAETFDEWF-------QISGENDQQE-----VVQQLHKVLRPF 392
Query: 998 LLRRLKADVEKQMPGKYEHIIYCRLSKRQRFLYDDFMSRAQTKETLASGNFMSIINCLMQ 1057
LLRRLK+DVEK +P K E I+ +S+ Q+ Y + + + G ++N MQ
Sbjct: 393 LLRRLKSDVEKGLPPKKETILKVGMSQMQKQYYKALLQK-DLEVVNGGGERKRLLNIAMQ 451
Query: 1058 LRKVCNHPDLFE 1069
LRK CNHP LF+
Sbjct: 452 LRKCCNHPYLFQ 463
Score = 143 bits (360), Expect = 2e-33
Identities = 70/139 (50%), Positives = 97/139 (69%), Gaps = 1/139 (0%)
Query: 1324 DNGHRALIFTQMTKVLDILEQFLNFHGYLYMRLDGATKIEDRQILTERFNSD-PRITVFI 1382
D R LIF+QMT++LDILE +L + GY Y R+DG T ++R E +N VF+
Sbjct: 496 DRDSRVLIFSQMTRLLDILEDYLMYRGYQYCRIDGNTGGDERDASIEAYNKPGSEKFVFL 555
Query: 1383 LSSRSGGLGINLTGADTVIFYDSDWNPAMDKQCQDRCHRIGQTRDVHIYRFVSDHTIESN 1442
LS+R+GGLGINL AD VI YDSDWNP +D Q QDR HRIGQ ++V ++RF +++ IE+
Sbjct: 556 LSTRAGGLGINLATADVVILYDSDWNPQVDLQAQDRAHRIGQKKEVQVFRFCTENAIEAK 615
Query: 1443 ILKKANQKRHLDNVVIQTG 1461
++++A +K LD +VIQ G
Sbjct: 616 VIERAYKKLALDALVIQQG 634
>Hs21071044 [K] KOG0385 Chromatin remodeling complex WSTF-ISWI small subunit
Length = 1054
Score = 256 bits (654), Expect = 2e-67
Identities = 146/341 (42%), Positives = 196/341 (56%), Gaps = 23/341 (6%)
Query: 731 KDEKAETTESVTSPAAADPLAVSDVPVPSLLRG-TLRIYQKQGLNWLASLYNNKTNGILA 789
+ E+ E E ++ + + PS ++G LR YQ +GLNWL SLY N NGILA
Sbjct: 148 RTEQEEDEELLSESRKTSNVCIRFEVSPSYVKGGPLRDYQIRGLNWLISLYENGVNGILA 207
Query: 790 DEMGLGKTIQTISLLAYLACEKENWGPHLIVVPTSVLLNWEMEFKRFAPGFKVLTYYGSP 849
DEMGLGKT+QTI+LL YL + GPH+++VP S L NW EFKR+ P +V+ + G
Sbjct: 208 DEMGLGKTLQTIALLGYLKHYRNIPGPHMVLVPKSTLHNWMNEFKRWVPSLRVICFVGDK 267
Query: 850 QQRREKRKGWNKPDAFHVCITSYQLVVHDQHSFKRKKWQYMILDEAHNIKNFRSTRWQAL 909
R + P + VC+TSY++V+ ++ FK+ W+Y+++DEAH IKN +S + +
Sbjct: 268 DARAAFIRDEMMPGEWDVCVTSYEMVIKEKSVFKKFHWRYLVIDEAHRIKNEKSKLSEIV 327
Query: 910 LNFNTERRLLLTGTPLQNNLAELWSLLYFLMPQTALENGKVSGFADLDAFQQWFGRPVDK 969
F + RLLLTGTPLQNNL ELW+LL FL+P F D F WF
Sbjct: 328 REFKSTNRLLLTGTPLQNNLHELWALLNFLLPDV---------FNSADDFDSWFDT---- 374
Query: 970 IVETGENYEQDEETKKTVSKLHQVLRPYLLRRLKADVEKQMPGKYEHIIYCRLSKRQRFL 1029
+N D+ K V +LH VL+P+LLRR+K DVEK +P K E IY LSK QR
Sbjct: 375 -----KNCLGDQ---KLVERLHAVLKPFLLRRIKTDVEKSLPPKKEIKIYLGLSKMQREW 426
Query: 1030 YDD-FMSRAQTKETLASGNFMSIINCLMQLRKVCNHPDLFE 1069
Y M + + M ++N LMQLRK CNHP LF+
Sbjct: 427 YTKILMKDIDVLNSSGKMDKMRLLNILMQLRKCCNHPYLFD 467
Score = 142 bits (358), Expect = 4e-33
Identities = 74/167 (44%), Positives = 105/167 (62%), Gaps = 13/167 (7%)
Query: 1324 DNGHRALIFTQMTKVLDILEQFLNFHGYLYMRLDGATKIEDRQI------------LTER 1371
+ G R LIF+QMT++LDILE + + GY Y RLDG T E+R+ E
Sbjct: 500 EQGSRVLIFSQMTRLLDILEDYCMWRGYEYCRLDGQTPHEEREDKFLEVEFLGQREAIEA 559
Query: 1372 FNS-DPRITVFILSSRSGGLGINLTGADTVIFYDSDWNPAMDKQCQDRCHRIGQTRDVHI 1430
FN+ + +F+LS+R+GGLGINL AD VI YDSDWNP +D Q DR HRIGQ + V +
Sbjct: 560 FNAPNSSKFIFMLSTRAGGLGINLASADVVILYDSDWNPQVDLQAMDRAHRIGQKKPVRV 619
Query: 1431 YRFVSDHTIESNILKKANQKRHLDNVVIQTGDFTTDYFTKLSVKDLL 1477
+R ++D+T+E I+++A K LD++VIQ G KL+ +++L
Sbjct: 620 FRLITDNTVEERIVERAEIKLRLDSIVIQQGRLIDQQSNKLAKEEML 666
>At5g19310 [BK] KOG0386 Chromatin remodeling complex SWI/SNF component SWI2 and
related ATPases (DNA/RNA helicase superfamily)
Length = 1041
Score = 255 bits (652), Expect = 3e-67
Identities = 144/313 (46%), Positives = 186/313 (59%), Gaps = 15/313 (4%)
Query: 758 PSLLRG-TLRIYQKQGLNWLASLYNNKTNGILADEMGLGKTIQTISLLAYLACEKENWGP 816
PSLL+G LR YQ +GL W+ SLYNN NGILADEMGLGKTIQTI+L+AYL K+ GP
Sbjct: 355 PSLLQGGELRSYQLEGLQWMVSLYNNDYNGILADEMGLGKTIQTIALIAYLLESKDLHGP 414
Query: 817 HLIVVPTSVLLNWEMEFKRFAPGFKVLTYYGSPQQRREKRKGWNKPDAFHVCITSYQLVV 876
HLI+ P +VL NWE EF +AP Y GS ++R E R F+V IT Y L++
Sbjct: 415 HLILAPKAVLPNWENEFALWAPSISAFLYDGSKEKRTEIR-ARIAGGKFNVLITHYDLIM 473
Query: 877 HDQHSFKRKKWQYMILDEAHNIKNFRSTRWQAL-LNFNTERRLLLTGTPLQNNLAELWSL 935
D+ K+ W YMI+DE H +KN + L + +RRLLLTGTP+QN+L ELWSL
Sbjct: 474 RDKAFLKKIDWNYMIVDEGHRLKNHECALAKTLGTGYRIKRRLLLTGTPIQNSLQELWSL 533
Query: 936 LYFLMPQTALENGKVSGFADLDAFQQWFGRPVDKIVETGENYEQDEETKKTVSKLHQVLR 995
L FL+P F + F++WF P E G DEE +++LH V+R
Sbjct: 534 LNFLLPHI---------FNSIHNFEEWFNTP---FAECGSASLTDEEELLIINRLHHVIR 581
Query: 996 PYLLRRLKADVEKQMPGKYEHIIYCRLSKRQRFLYDDFMSRAQTKETLASGNFMSIINCL 1055
P+LLRR K++VEK +PGK + I+ C +S Q+ Y + +G S+ N
Sbjct: 582 PFLLRRKKSEVEKFLPGKTQVILKCDMSAWQKLYYKQVTDVGRVGLHSGNGKSKSLQNLT 641
Query: 1056 MQLRKVCNHPDLF 1068
MQLRK CNHP LF
Sbjct: 642 MQLRKCCNHPYLF 654
Score = 152 bits (385), Expect = 3e-36
Identities = 73/141 (51%), Positives = 105/141 (73%), Gaps = 1/141 (0%)
Query: 1326 GHRALIFTQMTKVLDILEQFLNFHGYLYMRLDGATKIEDRQILTERFNS-DPRITVFILS 1384
GHR L+F+QMT+++D+LE +L+ + Y+Y+RLDG+TK + R IL ++FN D +F+LS
Sbjct: 688 GHRILLFSQMTRLIDLLEIYLSLNDYMYLRLDGSTKTDQRGILLKQFNEPDSPYFMFLLS 747
Query: 1385 SRSGGLGINLTGADTVIFYDSDWNPAMDKQCQDRCHRIGQTRDVHIYRFVSDHTIESNIL 1444
+R+GGLG+NL ADT+I +DSDWNP MD+Q +DR HRIGQ ++V ++ VS +IE IL
Sbjct: 748 TRAGGLGLNLQTADTIIIFDSDWNPQMDQQAEDRAHRIGQKKEVRVFVLVSIGSIEEVIL 807
Query: 1445 KKANQKRHLDNVVIQTGDFTT 1465
++A QK +D VIQ G F T
Sbjct: 808 ERAKQKMGIDAKVIQAGLFNT 828
>YOR290c [BK] KOG0386 Chromatin remodeling complex SWI/SNF component SWI2 and
related ATPases (DNA/RNA helicase superfamily)
Length = 1703
Score = 252 bits (643), Expect = 4e-66
Identities = 142/367 (38%), Positives = 216/367 (58%), Gaps = 23/367 (6%)
Query: 712 ENNSKTEELPSPPKSDNELKDEKAETTESVTSPAAADPLAVSDVPVPSLL-RGTLRIYQK 770
E + + ++L PK +E D+ + + +V A + PS+L GTL+ YQ
Sbjct: 714 EASEEVDDLSMVPKMKDEEYDDDDDNS-NVDYYNVAHRIKEDIKKQPSILVGGTLKDYQI 772
Query: 771 QGLNWLASLYNNKTNGILADEMGLGKTIQTISLLAYLACEKENWGPHLIVVPTSVLLNWE 830
+GL W+ SL+NN NGILADEMGLGKTIQTISLL YL K GP+L++VP S L NW
Sbjct: 773 KGLQWMVSLFNNHLNGILADEMGLGKTIQTISLLTYLYEMKNIRGPYLVIVPLSTLSNWS 832
Query: 831 MEFKRFAPGFKVLTYYGSPQQRREKRKGWNKPDAFHVCITSYQLVVHDQHSFKRKKWQYM 890
EF ++AP + +++ GSP +R+ K + + F V +T+++ ++ ++ + KW +M
Sbjct: 833 SEFAKWAPTLRTISFKGSPNERKAK-QAKIRAGEFDVVLTTFEYIIKERALLSKVKWVHM 891
Query: 891 ILDEAHNIKNFRSTRWQAL-LNFNTERRLLLTGTPLQNNLAELWSLLYFLMPQTALENGK 949
I+DE H +KN +S L +++ + RL+LTGTPLQNNL ELW+LL F++P+
Sbjct: 892 IIDEGHRMKNAQSKLSLTLNTHYHADYRLILTGTPLQNNLPELWALLNFVLPKI------ 945
Query: 950 VSGFADLDAFQQWFGRPVDKIVETGENYEQDEETKKTVSKLHQVLRPYLLRRLKADVEKQ 1009
F + +F +WF P + +EET + +LH+VLRP+LLRRLK DVEK+
Sbjct: 946 ---FNSVKSFDEWFNTPFANTGGQDKIELSEEETLLVIRRLHKVLRPFLLRRLKKDVEKE 1002
Query: 1010 MPGKYEHIIYCRLSKRQRFLYDD-------FMSRAQTKETLASGNFMSIINCLMQLRKVC 1062
+P K E ++ C++S Q+ +Y F+ K+ + F N +MQL+K+C
Sbjct: 1003 LPDKVEKVVKCKMSALQQIMYQQMLKYRRLFIGDQNNKKMVGLRGFN---NQIMQLKKIC 1059
Query: 1063 NHPDLFE 1069
NHP +FE
Sbjct: 1060 NHPFVFE 1066
Score = 144 bits (364), Expect = 9e-34
Identities = 76/159 (47%), Positives = 104/159 (64%), Gaps = 4/159 (2%)
Query: 1326 GHRALIFTQMTKVLDILEQFLNFHGYLYMRLDGATKIEDRQILTERFNS-DPRITVFILS 1384
GHR LIF QMT+++DI+E FL + Y+RLDG TK ++R L FN+ D FILS
Sbjct: 1103 GHRVLIFFQMTQIMDIMEDFLRYINIKYLRLDGHTKSDERSELLRLFNAPDSEYLCFILS 1162
Query: 1385 SRSGGLGINLTGADTVIFYDSDWNPAMDKQCQDRCHRIGQTRDVHIYRFVSDHTIESNIL 1444
+R+GGLG+NL ADTVI +D+DWNP D Q QDR HRIGQ +V I R ++ +++E IL
Sbjct: 1163 TRAGGLGLNLQTADTVIIFDTDWNPHQDLQAQDRAHRIGQKNEVRILRLITTNSVEEVIL 1222
Query: 1445 KKANQKRHLDNVVIQTGDF---TTDYFTKLSVKDLLGAE 1480
++A +K +D VIQ G F +T + ++ LL AE
Sbjct: 1223 ERAYKKLDIDGKVIQAGKFDNKSTSEEQEALLRSLLDAE 1261
>At3g06010 [BK] KOG0386 Chromatin remodeling complex SWI/SNF component SWI2 and
related ATPases (DNA/RNA helicase superfamily)
Length = 1132
Score = 251 bits (641), Expect = 6e-66
Identities = 141/313 (45%), Positives = 183/313 (58%), Gaps = 14/313 (4%)
Query: 758 PSLLRG-TLRIYQKQGLNWLASLYNNKTNGILADEMGLGKTIQTISLLAYLACEKENWGP 816
PSLL G LR YQ +GL W+ SL+NN NGILADEMGLGKTIQTISL+AYL K GP
Sbjct: 425 PSLLEGGELRSYQLEGLQWMVSLFNNNLNGILADEMGLGKTIQTISLIAYLLENKGVPGP 484
Query: 817 HLIVVPTSVLLNWEMEFKRFAPGFKVLTYYGSPQQRREKRKGWNKPDAFHVCITSYQLVV 876
+LIV P +VL NW EF + P Y G ++R+ R+ F+V IT Y L++
Sbjct: 485 YLIVAPKAVLPNWVNEFATWVPSIAAFLYDGRLEERKAIREKIAGEGKFNVLITHYDLIM 544
Query: 877 HDQHSFKRKKWQYMILDEAHNIKNFRSTRWQALL-NFNTERRLLLTGTPLQNNLAELWSL 935
D+ K+ +W YMI+DE H +KN S + LL + +RRLLLTGTP+QN+L ELWSL
Sbjct: 545 RDKAFLKKIEWYYMIVDEGHRLKNHESALAKTLLTGYRIKRRLLLTGTPIQNSLQELWSL 604
Query: 936 LYFLMPQTALENGKVSGFADLDAFQQWFGRPVDKIVETGENYEQDEETKKTVSKLHQVLR 995
L FL+P F + F++WF P + G DEE + +LH V+R
Sbjct: 605 LNFLLPHI---------FNSVQNFEEWFNAP---FADRGNVSLTDEEELLIIHRLHHVIR 652
Query: 996 PYLLRRLKADVEKQMPGKYEHIIYCRLSKRQRFLYDDFMSRAQTKETLASGNFMSIINCL 1055
P++LRR K +VEK +PGK + I+ C +S Q+ Y + SG S+ N
Sbjct: 653 PFILRRKKDEVEKFLPGKTQVILKCDMSAWQKVYYKQVTDMGRVGLQTGSGKSKSLQNLT 712
Query: 1056 MQLRKVCNHPDLF 1068
MQLRK CNHP LF
Sbjct: 713 MQLRKCCNHPYLF 725
Score = 150 bits (378), Expect = 2e-35
Identities = 72/141 (51%), Positives = 102/141 (72%), Gaps = 1/141 (0%)
Query: 1326 GHRALIFTQMTKVLDILEQFLNFHGYLYMRLDGATKIEDRQILTERFNS-DPRITVFILS 1384
GHR L+F+QMT+++D+LE +L + Y Y+RLDG TK + R +L ++FN D +F+LS
Sbjct: 759 GHRILLFSQMTRLIDVLEIYLTLNDYKYLRLDGTTKTDQRGLLLKQFNEPDSPYFMFLLS 818
Query: 1385 SRSGGLGINLTGADTVIFYDSDWNPAMDKQCQDRCHRIGQTRDVHIYRFVSDHTIESNIL 1444
+R+GGLG+NL ADTVI +DSDWNP MD+Q +DR HRIGQ ++V ++ VS ++E IL
Sbjct: 819 TRAGGLGLNLQTADTVIIFDSDWNPQMDQQAEDRAHRIGQKKEVRVFVLVSVGSVEEVIL 878
Query: 1445 KKANQKRHLDNVVIQTGDFTT 1465
++A QK +D VIQ G F T
Sbjct: 879 ERAKQKMGIDAKVIQAGLFNT 899
>YIL126w [BK] KOG0386 Chromatin remodeling complex SWI/SNF component SWI2 and
related ATPases (DNA/RNA helicase superfamily)
Length = 1359
Score = 251 bits (640), Expect = 8e-66
Identities = 135/317 (42%), Positives = 190/317 (59%), Gaps = 18/317 (5%)
Query: 760 LLRGTLRIYQKQGLNWLASLYNNKTNGILADEMGLGKTIQTISLLAYLACEKENWGPHLI 819
L+ GTL+ YQ +GL W+ SLYNN NGILADEMGLGKTIQ+ISL+ YL K++ GP L+
Sbjct: 465 LVGGTLKEYQLRGLEWMVSLYNNHLNGILADEMGLGKTIQSISLITYLYEVKKDIGPFLV 524
Query: 820 VVPTSVLLNWEMEFKRFAPGFKVLTYYGSPQQRREKRKGWNKPDAFHVCITSYQLVVHDQ 879
+VP S + NW +EF+++AP + Y G+P QR + + F V +T+Y+ ++ D+
Sbjct: 525 IVPLSTITNWTLEFEKWAPSLNTIIYKGTPNQRHSLQH-QIRVGNFDVLLTTYEYIIKDK 583
Query: 880 HSFKRKKWQYMILDEAHNIKNFRSTRWQALLN-FNTERRLLLTGTPLQNNLAELWSLLYF 938
+ W +MI+DE H +KN +S + + + T RL+LTGTPLQNNL ELW+LL F
Sbjct: 584 SLLSKHDWAHMIIDEGHRMKNAQSKLSFTISHYYRTRNRLILTGTPLQNNLPELWALLNF 643
Query: 939 LMPQTALENGKVSGFADLDAFQQWFGRPVDKIVETGENYE-QDEETKKTVSKLHQVLRPY 997
++P+ F F+ WF P T E E +EET + +LH+VLRP+
Sbjct: 644 VLPKI---------FNSAKTFEDWFNTPFAN-TGTQEKLELTEEETLLIIRRLHKVLRPF 693
Query: 998 LLRRLKADVEKQMPGKYEHIIYCRLSKRQRFLYDDFMSR-----AQTKETLASGNFMSII 1052
LLRRLK +VEK +P K E +I C+LS Q+ LY + E G +
Sbjct: 694 LLRRLKKEVEKDLPDKVEKVIKCKLSGLQQQLYQQMLKHNALFVGAGTEGATKGGIKGLN 753
Query: 1053 NCLMQLRKVCNHPDLFE 1069
N +MQLRK+CNHP +F+
Sbjct: 754 NKIMQLRKICNHPFVFD 770
Score = 144 bits (364), Expect = 9e-34
Identities = 79/169 (46%), Positives = 108/169 (63%), Gaps = 5/169 (2%)
Query: 1325 NGHRALIFTQMTKVLDILEQFLNFHGYLYMRLDGATKIEDRQILTERFNS-DPRITVFIL 1383
+GHR L+F QMT+V+DI+E FL YMRLDG+TK E+R + FN+ D F+L
Sbjct: 806 SGHRVLMFFQMTQVMDIMEDFLRMKDLKYMRLDGSTKTEERTEMLNAFNAPDSDYFCFLL 865
Query: 1384 SSRSGGLGINLTGADTVIFYDSDWNPAMDKQCQDRCHRIGQTRDVHIYRFVSDHTIESNI 1443
S+R+GGLG+NL ADTVI +D+DWNP D Q QDR HRIGQ +V I R ++ ++E I
Sbjct: 866 STRAGGLGLNLQTADTVIIFDTDWNPHQDLQAQDRAHRIGQKNEVRILRLITTDSVEEVI 925
Query: 1444 LKKANQKRHLDNVVIQTGDF---TTDYFTKLSVKDLLGAEAPEDIPDDK 1489
L++A QK +D VIQ G F +T + ++ L+ +E D DDK
Sbjct: 926 LERAMQKLDIDGKVIQAGKFDNKSTAEEQEAFLRRLIESETNRD-DDDK 973
>SPAC1250.01 [BK] KOG0386 Chromatin remodeling complex SWI/SNF component SWI2 and
related ATPases (DNA/RNA helicase superfamily)
Length = 1199
Score = 249 bits (636), Expect = 2e-65
Identities = 137/318 (43%), Positives = 192/318 (60%), Gaps = 22/318 (6%)
Query: 760 LLRGTLRIYQKQGLNWLASLYNNKTNGILADEMGLGKTIQTISLLAYLACEKENWGPHLI 819
L+ G L+ YQ +GL W+ SLYNN NGILADEMGLGKTIQTISL+ +L +K GP L+
Sbjct: 412 LVGGKLKEYQLRGLQWMISLYNNHLNGILADEMGLGKTIQTISLITHLIEKKRQNGPFLV 471
Query: 820 VVPTSVLLNWEMEFKRFAPGFKVLTYYGSPQQRREKRKGWNKPDAFHVCITSYQLVVHDQ 879
+VP S L NW MEF+R+AP + Y G PQ R+ + F V +T+Y+ ++ D+
Sbjct: 472 IVPLSTLTNWTMEFERWAPSIVKIVYKGPPQVRKALHPQVRHSN-FQVLLTTYEYIIKDR 530
Query: 880 HSFKRKKWQYMILDEAHNIKNFRSTRWQALLNFNTER-RLLLTGTPLQNNLAELWSLLYF 938
R KW YMI+DE H +KN +S L + + R RL+LTGTPLQNNL ELW+LL F
Sbjct: 531 PLLSRIKWIYMIIDEGHRMKNTQSKLTNTLTTYYSSRYRLILTGTPLQNNLPELWALLNF 590
Query: 939 LMPQTALENGKVSGFADLDAFQQWFGRPVDKIVETGENYEQDEETKKTVSKLHQVLRPYL 998
++P+ F + +F +WF P + +EE+ + +LH+VLRP+L
Sbjct: 591 VLPRI---------FNSIKSFDEWFNTPFANTGGQDKMELTEEESLLVIRRLHKVLRPFL 641
Query: 999 LRRLKADVEKQMPGKYEHIIYCRLSKRQRFLYDD-------FMSRAQTKETLASGNFMSI 1051
LRRLK DVE ++P K E +I C++S Q+ LY ++ A+ +T G +
Sbjct: 642 LRRLKKDVEAELPDKVEKVIRCQMSGLQQKLYYQMKKHGMLYVEDAKRGKTGIKG----L 697
Query: 1052 INCLMQLRKVCNHPDLFE 1069
N +MQL+K+CNHP +FE
Sbjct: 698 QNTVMQLKKICNHPFVFE 715
Score = 155 bits (392), Expect = 5e-37
Identities = 80/170 (47%), Positives = 116/170 (68%), Gaps = 6/170 (3%)
Query: 1325 NGHRALIFTQMTKVLDILEQFLNFHGYLYMRLDGATKIEDRQILTERFNSDP--RITVFI 1382
+GHR L+F QMT++++I+E +L++ + Y+RLDG+TK +DR L FN DP + +F+
Sbjct: 751 SGHRILMFFQMTQIMNIMEDYLHYRQWRYLRLDGSTKADDRSKLLGVFN-DPTAEVNLFL 809
Query: 1383 LSSRSGGLGINLTGADTVIFYDSDWNPAMDKQCQDRCHRIGQTRDVHIYRFVSDHTIESN 1442
LS+R+GGLG+NL ADTVI +DSDWNP D Q QDR HRIGQT++V IYR +++ ++E N
Sbjct: 810 LSTRAGGLGLNLQTADTVIIFDSDWNPHQDLQAQDRAHRIGQTKEVRIYRLITEKSVEEN 869
Query: 1443 ILKKANQKRHLDNVVIQTGDF---TTDYFTKLSVKDLLGAEAPEDIPDDK 1489
IL +A K +D VIQ G F +T + ++ LL E E+ D+K
Sbjct: 870 ILARAQYKLDIDGKVIQAGKFDNKSTPEEREAFLRSLLENENGEEENDEK 919
>YOR304w [K] KOG0385 Chromatin remodeling complex WSTF-ISWI small subunit
Length = 1120
Score = 246 bits (629), Expect = 2e-64
Identities = 141/316 (44%), Positives = 187/316 (58%), Gaps = 24/316 (7%)
Query: 758 PSLLR-GTLRIYQKQGLNWLASLYNNKTNGILADEMGLGKTIQTISLLAYLACEKENWGP 816
PS ++ G LR YQ QGLNWL SL+ NK +GILADEMGLGKT+QTIS L YL K+ GP
Sbjct: 176 PSFVKSGKLRDYQVQGLNWLISLHENKLSGILADEMGLGKTLQTISFLGYLRYVKQIEGP 235
Query: 817 HLIVVPTSVLLNWEMEFKRFAPGFKVLTYYGSPQQRREKRKGWNKPDAFHVCITSYQLVV 876
LI+VP S L NW EF ++ P VL +G R + + F V ITSY++V+
Sbjct: 236 FLIIVPKSTLDNWRREFLKWTPNVNVLVLHGDKDTRADIVRNIILEARFDVLITSYEMVI 295
Query: 877 HDQHSFKRKKWQYMILDEAHNIKNFRSTRWQALLNFNTERRLLLTGTPLQNNLAELWSLL 936
++++ KR WQY+++DEAH IKN +S Q + F ++ RLL+TGTPLQNNL ELW+LL
Sbjct: 296 REKNALKRLAWQYIVIDEAHRIKNEQSALSQIIRLFYSKNRLLITGTPLQNNLHELWALL 355
Query: 937 YFLMPQTALENGKVSGFADLDAFQQWFGRPVDKIVETGENYEQDEETKKTVSKLHQVLRP 996
FL+P F D + F +WF + N EQD+E + +LH VL P
Sbjct: 356 NFLLPDI---------FGDSELFDEWFEQ---------NNSEQDQEI--VIQQLHSVLNP 395
Query: 997 YLLRRLKADVEKQMPGKYEHIIYCRLSKRQRFLYDDFMSRAQTKETLASG---NFMSIIN 1053
+LLRR+KADVEK + K E +Y ++ Q Y + + A G ++N
Sbjct: 396 FLLRRVKADVEKSLLPKIETNVYVGMTDMQIQWYKSLLEKDIDAVNGAVGKREGKTRLLN 455
Query: 1054 CLMQLRKVCNHPDLFE 1069
+MQLRK CNHP LFE
Sbjct: 456 IVMQLRKCCNHPYLFE 471
Score = 144 bits (363), Expect = 1e-33
Identities = 69/139 (49%), Positives = 97/139 (69%), Gaps = 1/139 (0%)
Query: 1324 DNGHRALIFTQMTKVLDILEQFLNFHGYLYMRLDGATKIEDRQILTERFNS-DPRITVFI 1382
+ G R LIF+QM+++LDILE + F + Y R+DG+T E+R + +N + VF+
Sbjct: 504 EKGSRVLIFSQMSRLLDILEDYCYFRDFEYCRIDGSTSHEERIEAIDEYNKPNSEKFVFL 563
Query: 1383 LSSRSGGLGINLTGADTVIFYDSDWNPAMDKQCQDRCHRIGQTRDVHIYRFVSDHTIESN 1442
L++R+GGLGINL ADTVI +DSDWNP D Q DR HRIGQ + VH+YRFV+++ IE
Sbjct: 564 LTTRAGGLGINLVTADTVILFDSDWNPQADLQAMDRAHRIGQKKQVHVYRFVTENAIEEK 623
Query: 1443 ILKKANQKRHLDNVVIQTG 1461
++++A QK LD +VIQ G
Sbjct: 624 VIERAAQKLRLDQLVIQQG 642
>7303422 [K] KOG0385 Chromatin remodeling complex WSTF-ISWI small subunit
Length = 1027
Score = 243 bits (620), Expect = 2e-63
Identities = 138/340 (40%), Positives = 187/340 (54%), Gaps = 22/340 (6%)
Query: 731 KDEKAETTESVTSPAAADPLAVSDVPVPSLLRGTLRIYQKQGLNWLASLYNNKTNGILAD 790
K E+ E E + +A + D + G +R YQ +GLNW+ SLY N NGILAD
Sbjct: 94 KTEQEEDEELLAEDSATKEIFRFDASPAYIKSGEMRDYQIRGLNWMISLYENGINGILAD 153
Query: 791 EMGLGKTIQTISLLAYLACEKENWGPHLIVVPTSVLLNWEMEFKRFAPGFKVLTYYGSPQ 850
EMGLGKT+QTISLL YL K GPH+++VP S L NW EFK++ P + + G
Sbjct: 154 EMGLGKTLQTISLLGYLKHFKNQAGPHIVIVPKSTLQNWVNEFKKWCPSLRAVCLIGDQD 213
Query: 851 QRREKRKGWNKPDAFHVCITSYQLVVHDQHSFKRKKWQYMILDEAHNIKNFRSTRWQALL 910
R + P + VC+TSY++ + ++ FK+ W+Y+++DEAH IKN +S + L
Sbjct: 214 TRNTFIRDVLMPGEWDVCVTSYEMCIREKSVFKKFNWRYLVIDEAHRIKNEKSKLSEILR 273
Query: 911 NFNTERRLLLTGTPLQNNLAELWSLLYFLMPQTALENGKVSGFADLDAFQQWFGRPVDKI 970
F T RLL+TGTPLQNNL ELW+LL FL+P F + F +WF
Sbjct: 274 EFKTANRLLITGTPLQNNLHELWALLNFLLPDV---------FNSSEDFDEWF------- 317
Query: 971 VETGENYEQDEETKKTVSKLHQVLRPYLLRRLKADVEKQMPGKYEHIIYCRLSKRQRFLY 1030
N +++LH VL+P+LLRRLKA+VEK++ K E I+ LSK QR Y
Sbjct: 318 -----NTNTCLGDDALITRLHAVLKPFLLRRLKAEVEKRLKPKKEMKIFVGLSKMQRDWY 372
Query: 1031 DDFMSR-AQTKETLASGNFMSIINCLMQLRKVCNHPDLFE 1069
+ + M + N LMQLRK NHP LF+
Sbjct: 373 TKVLLKDIDVVNGAGKVEKMRLQNILMQLRKCTNHPYLFD 412
Score = 147 bits (371), Expect = 1e-34
Identities = 76/174 (43%), Positives = 105/174 (59%), Gaps = 1/174 (0%)
Query: 1305 LQYDCGXXXXXXXXXXXXXDNGHRALIFTQMTKVLDILEQFLNFHGYLYMRLDGATKIED 1364
L Y+ G + G R LIF+QMT++LDILE + ++ Y Y RLDG T ED
Sbjct: 426 LVYNSGKMAILDKLLPKLQEQGSRVLIFSQMTRMLDILEDYCHWRNYNYCRLDGQTPHED 485
Query: 1365 RQILTERFNSDPRIT-VFILSSRSGGLGINLTGADTVIFYDSDWNPAMDKQCQDRCHRIG 1423
R + FN D +F+LS+R+GGLGINL AD VI YDSDWNP MD Q DR HRIG
Sbjct: 486 RNRQIQEFNMDNSAKFLFMLSTRAGGLGINLATADVVIIYDSDWNPQMDLQAMDRAHRIG 545
Query: 1424 QTRDVHIYRFVSDHTIESNILKKANQKRHLDNVVIQTGDFTTDYFTKLSVKDLL 1477
Q + V ++R +++ T+E I+++A K LD +VIQ G + +L+ ++L
Sbjct: 546 QKKQVRVFRLITESTVEEKIVERAEVKLRLDKMVIQGGRLVDNRSNQLNKDEML 599
>CE00789 [K] KOG0385 Chromatin remodeling complex WSTF-ISWI small subunit
Length = 971
Score = 242 bits (618), Expect = 3e-63
Identities = 137/340 (40%), Positives = 184/340 (53%), Gaps = 22/340 (6%)
Query: 731 KDEKAETTESVTSPAAADPLAVSDVPVPSLLRGTLRIYQKQGLNWLASLYNNKTNGILAD 790
K E+ E E V +D L + D + G +R YQ +GLNWLASL +NK NGILAD
Sbjct: 60 KTEQEEDEEMVADAIKSDDLVIFDKSPFYIENGEMRDYQVRGLNWLASLQHNKINGILAD 119
Query: 791 EMGLGKTIQTISLLAYLACEKENWGPHLIVVPTSVLLNWEMEFKRFAPGFKVLTYYGSPQ 850
EMGLGKT+QTIS++ Y+ K PHL++VP S L NW EFK++ P + G
Sbjct: 120 EMGLGKTLQTISMIGYMKHYKNKASPHLVIVPKSTLQNWANEFKKWCPSINAVVLIGDEA 179
Query: 851 QRREKRKGWNKPDAFHVCITSYQLVVHDQHSFKRKKWQYMILDEAHNIKNFRSTRWQALL 910
R + + P F VC T+Y++++ + K+ W+Y+I+DEAH IKN +S + +
Sbjct: 180 ARNQVLRDVILPQKFDVCCTTYEMMLKVKTQLKKLNWRYIIIDEAHRIKNEKSKLSETVR 239
Query: 911 NFNTERRLLLTGTPLQNNLAELWSLLYFLMPQTALENGKVSGFADLDAFQQWFGRPVDKI 970
N+E RLL+TGTPLQNNL ELW+LL FL+P F D F WF
Sbjct: 240 ELNSENRLLITGTPLQNNLHELWALLNFLLPDI---------FTSSDDFDSWFSN----- 285
Query: 971 VETGENYEQDEETKKTVSKLHQVLRPYLLRRLKADVEKQMPGKYEHIIYCRLSKRQRFLY 1030
+ V +LH+VL+P+LLRR+K+DVEK + K E +Y LSK QR Y
Sbjct: 286 -------DAMSGNTDLVQRLHKVLQPFLLRRIKSDVEKSLLPKKEVKVYVGLSKMQREWY 338
Query: 1031 DD-FMSRAQTKETLASGNFMSIINCLMQLRKVCNHPDLFE 1069
M ++N LM LRK NHP LF+
Sbjct: 339 TKVLMKDIDIINGAGKVEKARLMNILMHLRKCVNHPYLFD 378
Score = 143 bits (360), Expect = 2e-33
Identities = 68/139 (48%), Positives = 96/139 (68%), Gaps = 1/139 (0%)
Query: 1324 DNGHRALIFTQMTKVLDILEQFLNFHGYLYMRLDGATKIEDRQILTERFNS-DPRITVFI 1382
+ G R LIF+Q +++LD+LE F + Y Y RLDG+T EDR E +N+ D + +F+
Sbjct: 411 EQGSRVLIFSQFSRMLDLLEDFCWWRHYEYCRLDGSTPHEDRSNAIEAYNAPDSKKFIFM 470
Query: 1383 LSSRSGGLGINLTGADTVIFYDSDWNPAMDKQCQDRCHRIGQTRDVHIYRFVSDHTIESN 1442
L++R+GGLGINL AD VI YDSDWNP D Q DR HRIGQ + V ++R ++++T++
Sbjct: 471 LTTRAGGLGINLATADVVIIYDSDWNPQSDLQAMDRAHRIGQKKQVRVFRLITENTVDER 530
Query: 1443 ILKKANQKRHLDNVVIQTG 1461
I++KA K LDN+VIQ G
Sbjct: 531 IIEKAEAKLRLDNIVIQQG 549
>At2g46020 [BK] KOG0386 Chromatin remodeling complex SWI/SNF component SWI2 and
related ATPases (DNA/RNA helicase superfamily)
Length = 1245
Score = 241 bits (616), Expect = 5e-63
Identities = 141/335 (42%), Positives = 196/335 (58%), Gaps = 31/335 (9%)
Query: 751 AVSDVPV--PSLLR-GTLRIYQKQGLNWLASLYNNKTNGILADEMGLGKTIQTISLLAYL 807
AV++V V PS+L+ GTLR YQ GL W+ SLYNNK NGILADEMGLGKT+Q ++L+AYL
Sbjct: 17 AVNEVVVRQPSMLQAGTLRDYQLVGLQWMLSLYNNKLNGILADEMGLGKTVQVMALIAYL 76
Query: 808 ACEKENWGPHLIVVPTSVLLNWEMEFKRFAPGFKVLTYYGSPQQRREKRKGWNKPDAFHV 867
K N+GPHLI+VP +VL+NW+ E + P + Y G+ Q R K K + F+V
Sbjct: 77 MEFKGNYGPHLIIVPNAVLVNWKSELHTWLPSVSCIYYVGTKDQ-RSKLFSQVKFEKFNV 135
Query: 868 CITSYQLVVHDQHSFKRKKWQYMILDEAHNIKNFRSTRWQALLNFNTERRLLLTGTPLQN 927
+T+Y+ +++D+ + W+Y+I+DEA +K+ S + L + +RRLLLTGTPLQN
Sbjct: 136 LVTTYEFIMYDRSKLSKVDWKYIIIDEAQRMKDRESVLARDLDRYRCQRRLLLTGTPLQN 195
Query: 928 NLAELWSLLYFLMPQTALENGKVSGFADLDAFQQWFGRPVDKIVETGENYEQD-EETKK- 985
+L ELWSLL L+P F + AF WF +P K N E D ET+K
Sbjct: 196 DLKELWSLLNLLLPDV---------FDNRKAFHDWFAQPFQK-EGPAHNIEDDWLETEKK 245
Query: 986 --TVSKLHQVLRPYLLRRLKADVEKQMPGKYEHIIYCRLSKRQRFLY------------- 1030
+ +LHQ+L P++LRR DVE +P K ++ CR+S Q +Y
Sbjct: 246 VIVIHRLHQILEPFMLRRRVEDVEGSLPAKVSVVLRCRMSAIQSAVYDWIKATGTLRVDP 305
Query: 1031 DDFMSRAQTKETLASGNFMSIINCLMQLRKVCNHP 1065
DD RAQ + + ++ N M+LRK CNHP
Sbjct: 306 DDEKLRAQKNPIYQAKIYRTLNNRCMELRKACNHP 340
Score = 107 bits (267), Expect = 2e-22
Identities = 56/130 (43%), Positives = 75/130 (57%), Gaps = 1/130 (0%)
Query: 1302 KSLLQYDCGXXXXXXXXXXXXXDNGHRALIFTQMTKVLDILEQFLNFHGYLYMRLDGATK 1361
K L CG GHR L+F+ MTK+LDILE++L + +Y R+DG T
Sbjct: 352 KDFLVRSCGKLWILDRILIKLQRTGHRVLLFSTMTKLLDILEEYLQWRRLVYRRIDGTTS 411
Query: 1362 IEDRQILTERFNS-DPRITVFILSSRSGGLGINLTGADTVIFYDSDWNPAMDKQCQDRCH 1420
+EDR+ FN D +F+LS R+ G G+NL ADTV+ YD D NP ++Q R H
Sbjct: 412 LEDRESAIVDFNDPDTDCFIFLLSIRAAGRGLNLQTADTVVIYDPDPNPKNEEQAVARAH 471
Query: 1421 RIGQTRDVHI 1430
RIGQTR+V +
Sbjct: 472 RIGQTREVKV 481
>CE27114 [BK] KOG0386 Chromatin remodeling complex SWI/SNF component SWI2 and
related ATPases (DNA/RNA helicase superfamily)
Length = 1336
Score = 240 bits (612), Expect = 1e-62
Identities = 131/308 (42%), Positives = 190/308 (61%), Gaps = 18/308 (5%)
Query: 765 LRIYQKQGLNWLASLYNNKTNGILADEMGLGKTIQTISLLAYLACEKENWGPHLIVVPTS 824
L+ YQ +GL W+ SL+NN NGILADEMGLGKTIQTI+ + YL K+ GP L++VP S
Sbjct: 366 LKPYQIKGLEWMVSLFNNNLNGILADEMGLGKTIQTIAFITYLMEIKKTSGPFLVIVPLS 425
Query: 825 VLLNWEMEFKRFAPGFKVLTYYGSPQQRREKRKGWNKPDAFHVCITSYQLVVHDQHSFKR 884
+ NW+ EF ++A ++ Y G P++ R+ + K F+V +T+++ V+ ++ +
Sbjct: 426 TVPNWQNEFDKWAANVHLIAYKG-PKETRKVFEPIIKSGKFNVLLTTFEYVIREKALLGK 484
Query: 885 KKWQYMILDEAHNIKNFRSTRWQALLN--FNTERRLLLTGTPLQNNLAELWSLLYFLMPQ 942
+W+YMI+DE H +KN + + +LN F +RRLL+TGTPLQN L ELW+LL FL+P
Sbjct: 485 LRWKYMIIDEGHRLKN-QHCKLTEMLNTRFQCQRRLLITGTPLQNKLPELWALLNFLLP- 542
Query: 943 TALENGKVSGFADLDAFQQWFGRPVDKIVETGENYE-QDEETKKTVSKLHQVLRPYLLRR 1001
S F+ F+QWF P TGE E EET + +LH+VLRP+LLRR
Sbjct: 543 --------SIFSSCSTFEQWFNAP---FATTGEKVELTQEETMLIIRRLHKVLRPFLLRR 591
Query: 1002 LKADVEKQMPGKYEHIIYCRLSKRQRFLYDDFMSRAQTKETLASGNFMSIINCLMQLRKV 1061
LK +VE ++P K E ++ C +S Q+ LY M + + + S+ N ++ LRK+
Sbjct: 592 LKKEVESELPDKMEFVVRCDMSALQKVLY-KHMQKGLLLDGKTNTGSKSLRNTMIHLRKL 650
Query: 1062 CNHPDLFE 1069
CNHP LFE
Sbjct: 651 CNHPFLFE 658
Score = 137 bits (344), Expect = 2e-31
Identities = 73/173 (42%), Positives = 110/173 (63%), Gaps = 10/173 (5%)
Query: 1326 GHRALIFTQMTKVLDILEQFLNFHGYLYMRLDGATKIEDRQILTERFNS-DPRITVFILS 1384
GHR L+F QMT ++ I+E FL Y+RLDG+TK ++R L ++FN+ + +F+LS
Sbjct: 699 GHRVLMFFQMTSMMTIVEDFLAGGTIQYLRLDGSTKPDERGALLDKFNAPNSEYFLFMLS 758
Query: 1385 SRSGGLGINLTGADTVIFYDSDWNPAMDKQCQDRCHRIGQTRDVHIYRFVSDHTIESNIL 1444
+R+GGLG+NL ADTVI +DSDWNP D Q QDR HRIGQ +V ++R ++ +++E IL
Sbjct: 759 TRAGGLGLNLQTADTVIIFDSDWNPHQDMQAQDRAHRIGQKAEVRVFRLITANSVEEKIL 818
Query: 1445 KKANQKRHLDNVVIQTGDFTTDYFTKLSVKDLL--------GAEAPEDIPDDK 1489
A K ++D VIQ G F + T +++L +E E++P+D+
Sbjct: 819 AAARYKLNVDEKVIQAGKF-DNRSTGAERREILENIIKTENESEEDEEVPNDE 870
>At2g28290 [BK] KOG0386 Chromatin remodeling complex SWI/SNF component SWI2 and
related ATPases (DNA/RNA helicase superfamily)
Length = 1339
Score = 234 bits (596), Expect = 1e-60
Identities = 134/323 (41%), Positives = 185/323 (56%), Gaps = 25/323 (7%)
Query: 759 SLLRGTLRIYQKQGLNWLASLYNNKTNGILADEMGLGKT--------IQTISLLAYLACE 810
SL+ G LR YQ GL WL SLYNN NGILADEMGLGKT +Q ISL+ YL
Sbjct: 787 SLVGGKLREYQMNGLRWLVSLYNNHLNGILADEMGLGKTVQMGLGKTVQVISLICYLMET 846
Query: 811 KENWGPHLIVVPTSVLLNWEMEFKRFAPGFKVLTYYGSPQQRREKRKGWNKPDAFHVCIT 870
K + GP L+VVP+SVL W+ E +AP + Y G+P +RR+ K F+V +T
Sbjct: 847 KNDRGPFLVVVPSSVLPGWQSEINFWAPSIHKIVYCGTPDERRKLFKEQIVHQKFNVLLT 906
Query: 871 SYQLVV--HDQHSFKRKKWQYMILDEAHNIKNFRSTRWQALLNFNTERRLLLTGTPLQNN 928
+Y+ ++ HD+ + W Y+I+DE H IKN L ++ + RLLLTGTPLQNN
Sbjct: 907 TYEYLMNKHDRPKLSKIHWHYIIIDEGHRIKNASCKLNADLKHYVSSHRLLLTGTPLQNN 966
Query: 929 LAELWSLLYFLMPQTALENGKVSGFADLDAFQQWFGRPVDKIVETGENYEQDEETKKTVS 988
L ELW+LL FL+P F + F QWF +P E+ +EE ++
Sbjct: 967 LEELWALLNFLLPNI---------FNSSEDFSQWFNKPFQSNGESSA-LLSEEENLLIIN 1016
Query: 989 KLHQVLRPYLLRRLKADVEKQMPGKYEHIIYCRLSKRQRFLYDDFMSRAQTK-ETLASGN 1047
+LHQVLRP++LRRLK VE ++P K E +I C S Q+ L M R + ++ +
Sbjct: 1017 RLHQVLRPFVLRRLKHKVENELPEKIERLIRCEASAYQKLL----MKRVEDNLGSIGNAK 1072
Query: 1048 FMSIINCLMQLRKVCNHPDLFEV 1070
++ N +M+LR +CNHP L ++
Sbjct: 1073 SRAVHNSVMELRNICNHPYLSQL 1095
Score = 126 bits (317), Expect = 2e-28
Identities = 63/138 (45%), Positives = 87/138 (62%), Gaps = 1/138 (0%)
Query: 1327 HRALIFTQMTKVLDILEQFLNFHGYLYMRLDGATKIEDRQILTERFN-SDPRITVFILSS 1385
HR L F+ MT++LD++E +L GY Y+RLDG T DR L + FN S +F+LS
Sbjct: 1127 HRVLFFSTMTRLLDVMEDYLTLKGYKYLRLDGQTSGGDRGALIDGFNKSGSPFFIFLLSI 1186
Query: 1386 RSGGLGINLTGADTVIFYDSDWNPAMDKQCQDRCHRIGQTRDVHIYRFVSDHTIESNILK 1445
R+GG+G+NL ADTVI +D+DWNP +D Q Q R HRIGQ +DV + RF + +++E +
Sbjct: 1187 RAGGVGVNLQAADTVILFDTDWNPQVDLQAQARAHRIGQKKDVLVLRFETVNSVEEQVRA 1246
Query: 1446 KANQKRHLDNVVIQTGDF 1463
A K + N I G F
Sbjct: 1247 SAEHKLGVANQSITAGFF 1264
>YBR245c [K] KOG0385 Chromatin remodeling complex WSTF-ISWI small subunit
Length = 1129
Score = 233 bits (595), Expect = 1e-60
Identities = 137/343 (39%), Positives = 191/343 (54%), Gaps = 32/343 (9%)
Query: 730 LKDEKAETTESVTSPAAADPLAVSDVPVPSLLRGTLRIYQKQGLNWLASLYNNKTNGILA 789
LK+E ++ ES+ P V+ G LR YQ QG+NWL SL+ NK GILA
Sbjct: 170 LKEEDSDDDESIEFQFRESPAYVN---------GQLRPYQIQGVNWLVSLHKNKIAGILA 220
Query: 790 DEMGLGKTIQTISLLAYLACEKENWGPHLIVVPTSVLLNWEMEFKRFAPGFKVLTYYGSP 849
DEMGLGKT+QTIS L YL ++ GP L++ P S L NW E R+ P G
Sbjct: 221 DEMGLGKTLQTISFLGYLRYIEKIPGPFLVIAPKSTLNNWLREINRWTPDVNAFILQGDK 280
Query: 850 QQRREKRKGWNKPDAFHVCITSYQLVVHDQHSFKRKKWQYMILDEAHNIKNFRSTRWQAL 909
++R E + F V I SY++++ ++ K+ W+Y+I+DEAH IKN S Q L
Sbjct: 281 EERAELIQKKLLGCDFDVVIASYEIIIREKSPLKKINWEYIIIDEAHRIKNEESMLSQVL 340
Query: 910 LNFNTERRLLLTGTPLQNNLAELWSLLYFLMPQTALENGKVSGFADLDAFQQWFGRPVDK 969
F + RLL+TGTPLQNNL ELW+LL FL+P F+D F WF
Sbjct: 341 REFTSRNRLLITGTPLQNNLHELWALLNFLLPDI---------FSDAQDFDDWF------ 385
Query: 970 IVETGENYEQDEETKKTVSKLHQVLRPYLLRRLKADVEKQMPGKYEHIIYCRLSKRQRFL 1029
+ E+ E+D++ K V +LH VL+P+LLRR+K+DVE + K E +Y +S Q+
Sbjct: 386 ---SSESTEEDQD--KIVKQLHTVLQPFLLRRIKSDVETSLLPKKELNLYVGMSSMQKKW 440
Query: 1030 YDDFMSRAQTKETLASGNFMS---IINCLMQLRKVCNHPDLFE 1069
Y + + ++G+ S ++N +MQLRK CNHP LF+
Sbjct: 441 YKKILEKDLDAVNGSNGSKESKTRLLNIMMQLRKCCNHPYLFD 483
Score = 145 bits (367), Expect = 4e-34
Identities = 70/137 (51%), Positives = 97/137 (70%), Gaps = 1/137 (0%)
Query: 1324 DNGHRALIFTQMTKVLDILEQFLNFHGYLYMRLDGATKIEDRQILTERFNS-DPRITVFI 1382
+ G R LIF+QM+++LDILE + F Y Y R+DG+T EDR + +N+ D + VF+
Sbjct: 516 EEGSRVLIFSQMSRLLDILEDYCYFRNYEYCRIDGSTAHEDRIQAIDDYNAPDSKKFVFL 575
Query: 1383 LSSRSGGLGINLTGADTVIFYDSDWNPAMDKQCQDRCHRIGQTRDVHIYRFVSDHTIESN 1442
L++R+GGLGINLT AD V+ YDSDWNP D Q DR HRIGQ + V ++R V+D+++E
Sbjct: 576 LTTRAGGLGINLTSADVVVLYDSDWNPQADLQAMDRAHRIGQKKQVKVFRLVTDNSVEEK 635
Query: 1443 ILKKANQKRHLDNVVIQ 1459
IL++A QK LD +VIQ
Sbjct: 636 ILERATQKLRLDQLVIQ 652
>Hs21914927 [K] KOG0385 Chromatin remodeling complex WSTF-ISWI small subunit
Length = 838
Score = 226 bits (576), Expect = 2e-58
Identities = 133/340 (39%), Positives = 192/340 (56%), Gaps = 29/340 (8%)
Query: 712 ENNSKT----EELPSPPKSDNELKDEKAETTESVTSPAAADPLAVSDVPVP-----SLLR 762
EN+S T E+L S++ +KD +ET T + PVP
Sbjct: 161 ENSSSTNLCVEDLQKNKDSNSIIKDRLSETVRQNTKFFFDPVRKCNGQPVPFQQPKHFTG 220
Query: 763 GTLRIYQKQGLNWLASLYNNKTNGILADEMGLGKTIQTISLLAYLACEKENWGPHLIVVP 822
G +R YQ +G+ WL L+ N NGILADEMGLGKT+Q I+ +A L ++ GP L+ P
Sbjct: 221 GVMRWYQVEGMEWLRMLWENGINGILADEMGLGKTVQCIATIA-LMIQRGVPGPFLVCGP 279
Query: 823 TSVLLNWEMEFKRFAPGFKVLTYYGSPQQRRE------KRKGWNKPDAFHVCITSYQLVV 876
S L NW EFKRF P + Y+G+ ++R++ KRKG + V ITS+++ +
Sbjct: 280 LSTLPNWMAEFKRFTPDIPTMLYHGTQEERQKLVRNIYKRKGTLQ--IHPVVITSFEIAM 337
Query: 877 HDQHSFKRKKWQYMILDEAHNIKNFRSTRWQALLNFNTERRLLLTGTPLQNNLAELWSLL 936
D+++ + W+Y+I+DE H IKN + + L FN + +LLLTGTPLQNNL+ELWSLL
Sbjct: 338 RDRNALQHCYWKYLIVDEGHRIKNMKCRLIRELKRFNADNKLLLTGTPLQNNLSELWSLL 397
Query: 937 YFLMPQTALENGKVSGFADLDAFQQWFGRPVDKIVETGENYEQDEETKKTVSKLHQVLRP 996
FL+P F DL +F+ WF + + ET E+ E + + LHQ+L P
Sbjct: 398 NFLLPDV---------FDDLKSFESWF--DITSLSETAEDIIAKEREQNVLHMLHQILTP 446
Query: 997 YLLRRLKADVEKQMPGKYEHIIYCRLSKRQRFLYDDFMSR 1036
+LLRRLK+DV ++P K E ++Y LSK+Q Y ++R
Sbjct: 447 FLLRRLKSDVALEVPPKREVVVYAPLSKKQEIFYTAIVNR 486
Score = 150 bits (380), Expect = 1e-35
Identities = 68/138 (49%), Positives = 97/138 (70%)
Query: 1326 GHRALIFTQMTKVLDILEQFLNFHGYLYMRLDGATKIEDRQILTERFNSDPRITVFILSS 1385
GH+ L+F+QMT +LDIL + + + + RLDG+ +R+ FN+DP + +F++S+
Sbjct: 615 GHKVLLFSQMTSMLDILMDYCHLRDFNFSRLDGSMSYSEREKNMHSFNTDPEVFIFLVST 674
Query: 1386 RSGGLGINLTGADTVIFYDSDWNPAMDKQCQDRCHRIGQTRDVHIYRFVSDHTIESNILK 1445
R+GGLGINLT ADTVI YDSDWNP D Q QDRCHRIGQT+ V +YR V+ +TI+ I++
Sbjct: 675 RAGGLGINLTAADTVIIYDSDWNPQSDLQAQDRCHRIGQTKPVVVYRLVTANTIDQKIVE 734
Query: 1446 KANQKRHLDNVVIQTGDF 1463
+A KR L+ ++I F
Sbjct: 735 RAAAKRKLEKLIIHKNHF 752
>At2g13370 [K] KOG0384 Chromodomain-helicase DNA-binding protein
Length = 1738
Score = 222 bits (566), Expect = 3e-57
Identities = 124/316 (39%), Positives = 189/316 (59%), Gaps = 28/316 (8%)
Query: 760 LLRGTLRIYQKQGLNWLASLYNNKTNGILADEMGLGKTIQTISLLAYLACEKENWGPHLI 819
L+ GTLR YQ +GLN+L + + N TN ILADEMGLGKT+Q++S+L +L ++ GP L+
Sbjct: 636 LIGGTLRDYQLEGLNFLVNSWLNDTNVILADEMGLGKTVQSVSMLGFLQNTQQIPGPFLV 695
Query: 820 VVPTSVLLNWEMEFKRFAPGFKVLTYYGSPQQRREKRK-----GWNKPDAFHVCITSYQL 874
VVP S L NW EF+++ PG ++ Y G+ R + K +P F+ +T+Y++
Sbjct: 696 VVPLSTLANWAKEFRKWLPGMNIIVYVGTRASREVRNKTNDVHKVGRPIKFNALLTTYEV 755
Query: 875 VVHDQHSFKRKKWQYMILDEAHNIKNFRSTRWQALLNFNTERRLLLTGTPLQNNLAELWS 934
V+ D+ + KW Y+++DEAH +KN + + ALL F+T+ +LL+TGTPLQN++ ELW+
Sbjct: 756 VLKDKAVLSKIKWIYLMVDEAHRLKNSEAQLYTALLEFSTKNKLLITGTPLQNSVEELWA 815
Query: 935 LLYFLMPQTALENGKVSGFADLDAFQQWFGRPVDKIVETGENYEQDEETKKTVSKLHQVL 994
LL+FL P GK + D+ VE +N E++ ++ LH L
Sbjct: 816 LLHFLDP------GKF--------------KNKDEFVENYKNLSSFNESE--LANLHLEL 853
Query: 995 RPYLLRRLKADVEKQMPGKYEHIIYCRLSKRQRFLYDDFMSR-AQTKETLASGNFMSIIN 1053
RP++LRR+ DVEK +P K E I+ +S Q+ Y + R GN +S++N
Sbjct: 854 RPHILRRVIKDVEKSLPPKIERILRVEMSPLQKQYYKWILERNFHDLNKGVRGNQVSLLN 913
Query: 1054 CLMQLRKVCNHPDLFE 1069
+++L+K CNHP LFE
Sbjct: 914 IVVELKKCCNHPFLFE 929
Score = 139 bits (349), Expect = 5e-32
Identities = 69/134 (51%), Positives = 94/134 (69%), Gaps = 1/134 (0%)
Query: 1327 HRALIFTQMTKVLDILEQFLNFHGYLYMRLDGATKIEDRQILTERFNSDPRITV-FILSS 1385
HR LIF+QM ++LDIL ++L+ G+ + RLDG+TK E RQ + FN+ F+LS+
Sbjct: 970 HRVLIFSQMVRMLDILAEYLSLRGFQFQRLDGSTKAELRQQAMDHFNAPASDDFCFLLST 1029
Query: 1386 RSGGLGINLTGADTVIFYDSDWNPAMDKQCQDRCHRIGQTRDVHIYRFVSDHTIESNILK 1445
R+GGLGINL ADTV+ +DSDWNP D Q R HRIGQ V+IYRFV+ ++E IL+
Sbjct: 1030 RAGGLGINLATADTVVIFDSDWNPQNDLQAMSRAHRIGQQEVVNIYRFVTSKSVEEEILE 1089
Query: 1446 KANQKRHLDNVVIQ 1459
+A +K LD++VIQ
Sbjct: 1090 RAKRKMVLDHLVIQ 1103
>Hs21071046 [K] KOG0385 Chromatin remodeling complex WSTF-ISWI small subunit
Length = 1033
Score = 222 bits (565), Expect = 4e-57
Identities = 133/341 (39%), Positives = 181/341 (53%), Gaps = 44/341 (12%)
Query: 731 KDEKAETTESVTSPAAADPLAVSDVPVPSLLRG-TLRIYQKQGLNWLASLYNNKTNGILA 789
+ E+ E E ++ + + PS ++G LR YQ +GLNWL SLY N NGILA
Sbjct: 148 RTEQEEDEELLSESRKTSNVCIRFEVSPSYVKGGPLRDYQIRGLNWLISLYENGVNGILA 207
Query: 790 DEMGLGKTIQTISLLAYLACEKENWGPHLIVVPTSVLLNWEMEFKRFAPGFKVLTYYGSP 849
DE+ GPH+++VP S L NW EFKR+ P +V+ + G
Sbjct: 208 DEIP---------------------GPHMVLVPKSTLHNWMNEFKRWVPSLRVICFVGDK 246
Query: 850 QQRREKRKGWNKPDAFHVCITSYQLVVHDQHSFKRKKWQYMILDEAHNIKNFRSTRWQAL 909
R + P + VC+TSY++V+ ++ FK+ W+Y+++DEAH IKN +S + +
Sbjct: 247 DARAAFIRDEMMPGEWDVCVTSYEMVIKEKSVFKKFHWRYLVIDEAHRIKNEKSKLSEIV 306
Query: 910 LNFNTERRLLLTGTPLQNNLAELWSLLYFLMPQTALENGKVSGFADLDAFQQWFGRPVDK 969
F + RLLLTGTPLQNNL ELW+LL FL+P F D F WF
Sbjct: 307 REFKSTNRLLLTGTPLQNNLHELWALLNFLLPDV---------FNSADDFDSWFDT---- 353
Query: 970 IVETGENYEQDEETKKTVSKLHQVLRPYLLRRLKADVEKQMPGKYEHIIYCRLSKRQRFL 1029
+N D+ K V +LH VL+P+LLRR+K DVEK +P K E IY LSK QR
Sbjct: 354 -----KNCLGDQ---KLVERLHAVLKPFLLRRIKTDVEKSLPPKKEIKIYLGLSKMQREW 405
Query: 1030 YDD-FMSRAQTKETLASGNFMSIINCLMQLRKVCNHPDLFE 1069
Y M + + M ++N LMQLRK CNHP LF+
Sbjct: 406 YTKILMKDIDVLNSSGKMDKMRLLNILMQLRKCCNHPYLFD 446
Score = 142 bits (358), Expect = 4e-33
Identities = 74/167 (44%), Positives = 105/167 (62%), Gaps = 13/167 (7%)
Query: 1324 DNGHRALIFTQMTKVLDILEQFLNFHGYLYMRLDGATKIEDRQI------------LTER 1371
+ G R LIF+QMT++LDILE + + GY Y RLDG T E+R+ E
Sbjct: 479 EQGSRVLIFSQMTRLLDILEDYCMWRGYEYCRLDGQTPHEEREDKFLEVEFLGQREAIEA 538
Query: 1372 FNS-DPRITVFILSSRSGGLGINLTGADTVIFYDSDWNPAMDKQCQDRCHRIGQTRDVHI 1430
FN+ + +F+LS+R+GGLGINL AD VI YDSDWNP +D Q DR HRIGQ + V +
Sbjct: 539 FNAPNSSKFIFMLSTRAGGLGINLASADVVILYDSDWNPQVDLQAMDRAHRIGQKKPVRV 598
Query: 1431 YRFVSDHTIESNILKKANQKRHLDNVVIQTGDFTTDYFTKLSVKDLL 1477
+R ++D+T+E I+++A K LD++VIQ G KL+ +++L
Sbjct: 599 FRLITDNTVEERIVERAEIKLRLDSIVIQQGRLIDQQSNKLAKEEML 645
>At5g66750 [K] KOG0385 Chromatin remodeling complex WSTF-ISWI small subunit
Length = 764
Score = 220 bits (560), Expect = 2e-56
Identities = 127/321 (39%), Positives = 181/321 (55%), Gaps = 20/321 (6%)
Query: 758 PSLLRGTLRIYQKQGLNWLASLYNNKTNGILADEMGLGKTIQTISLLAYLACEKENWGPH 817
P L G L+ YQ +G+ WL SL+ N NGILAD+MGLGKTIQTI L++L + GP+
Sbjct: 195 PLLTGGQLKSYQLKGVKWLISLWQNGLNGILADQMGLGKTIQTIGFLSHLKGNGLD-GPY 253
Query: 818 LIVVPTSVLLNWEMEFKRFAPGFKVLTYYGSPQQRRE-KRKGWNKP--DAFHVCITSYQL 874
L++ P S L NW E RF P + Y+G QR E +RK K F + ITSY++
Sbjct: 254 LVIAPLSTLSNWFNEIARFTPSINAIIYHGDKNQRDELRRKHMPKTVGPKFPIVITSYEV 313
Query: 875 VVHDQHSFKRK-KWQYMILDEAHNIKNFRSTRWQALLNFNTERRLLLTGTPLQNNLAELW 933
++D R W+Y+++DE H +KN + + L + + +LLLTGTPLQNNL+ELW
Sbjct: 314 AMNDAKRILRHYPWKYVVIDEGHRLKNHKCKLLRELKHLKMDNKLLLTGTPLQNNLSELW 373
Query: 934 SLLYFLMPQTALENGKVSGFADLDAFQQWFGRPVDKIVETGENYEQDEETKKTVSKLHQV 993
SLL F++P F D F+ WF +K E+++ + VSKLH +
Sbjct: 374 SLLNFILPDI---------FTSHDEFESWFDFS-EKNKNEATKEEEEKRRAQVVSKLHGI 423
Query: 994 LRPYLLRRLKADVEKQMPGKYEHIIYCRLSKRQRFLYDDFMS---RAQTKETLASGNFM- 1049
LRP++LRR+K DVE +P K E I+Y ++ Q+ + ++ A E G
Sbjct: 424 LRPFILRRMKCDVELSLPRKKEIIMYATMTDHQKKFQEHLVNNTLEAHLGENAIRGQGWK 483
Query: 1050 -SIINCLMQLRKVCNHPDLFE 1069
+ N ++QLRK CNHPDL +
Sbjct: 484 GKLNNLVIQLRKNCNHPDLLQ 504
Score = 155 bits (391), Expect = 6e-37
Identities = 86/221 (38%), Positives = 130/221 (57%), Gaps = 6/221 (2%)
Query: 1275 HHLVSQMRSLENPFHQLQTKL--SVAFPDKSLLQYDCGXXXXXXXXXXXXXDNGHRALIF 1332
++LV Q+R N LQ ++ S +P + CG N H+ LIF
Sbjct: 487 NNLVIQLRKNCNHPDLLQGQIDGSYLYPPVEEIVGQCGKFRLLERLLVRLFANNHKVLIF 546
Query: 1333 TQMTKVLDILEQFLNFHGYLYMRLDGATKIEDRQILTERFNSDPR-ITVFILSSRSGGLG 1391
+Q TK+LDI++ + + G+ R+DG+ K+++R+ + F+ + ++F+LS+R+GGLG
Sbjct: 547 SQWTKLLDIMDYYFSEKGFEVCRIDGSVKLDERRRQIKDFSDEKSSCSIFLLSTRAGGLG 606
Query: 1392 INLTGADTVIFYDSDWNPAMDKQCQDRCHRIGQTRDVHIYRFVSDHTIESNILKKANQKR 1451
INLT ADT I YDSDWNP MD Q DRCHRIGQT+ VH+YR + +IE+ +LK+A K
Sbjct: 607 INLTAADTCILYDSDWNPQMDLQAMDRCHRIGQTKPVHVYRLSTAQSIETRVLKRAYSKL 666
Query: 1452 HLDNVVIQTGDFTTD---YFTKLSVKDLLGAEAPEDIPDDK 1489
L++VVI G F + T L +D+L ++ +DK
Sbjct: 667 KLEHVVIGQGQFHQERAKSSTPLEEEDILALLKEDETAEDK 707
>YFR038w [K] KOG0385 Chromatin remodeling complex WSTF-ISWI small subunit
Length = 778
Score = 218 bits (555), Expect = 6e-56
Identities = 138/331 (41%), Positives = 186/331 (55%), Gaps = 29/331 (8%)
Query: 712 ENNSKTEELPSPPKSDNELKDEKAETTESVTSPAAADPLAVSDVPVPSLLRGT-LRIYQK 770
E++SK + +D K +K E T T A D A+ P LL+ L+ YQ
Sbjct: 173 EHSSKKRKTKKKSITDFFKKQKKNEDT--TTQNGAPDDAAIKQ---PRLLKNCILKPYQL 227
Query: 771 QGLNWLASLYNNKTNGILADEMGLGKTIQTISLLAYLACEKENWGPHLIVVPTSVLLNWE 830
+GLNWL +LY N NGILADEMGLGKT+Q+I+LLA++ E + GP L+ P S L NW
Sbjct: 228 EGLNWLITLYENGLNGILADEMGLGKTVQSIALLAFIY-EMDTKGPFLVTAPLSTLDNWM 286
Query: 831 MEFKRFAPGFKVLTYYGSP--QQRREKRKGWNKPDA-FHVCITSYQLVVHDQHSFKRKKW 887
EF +FAP VL YYG+ ++R K K + K + ITSY++++ D + W
Sbjct: 287 NEFAKFAPDLPVLKYYGTNGYKERSAKLKNFFKQHGGTGIVITSYEIILRDTDLIMSQNW 346
Query: 888 QYMILDEAHNIKNFRSTRWQALLNFNTERRLLLTGTPLQNNLAELWSLLYFLMPQTALEN 947
+++I+DE H +KN + L NT RLLLTGTPLQNNLAELWSLL F+MP
Sbjct: 347 KFLIVDEGHRLKNINCRLIKELKKINTSNRLLLTGTPLQNNLAELWSLLNFIMPDI---- 402
Query: 948 GKVSGFADLDAFQQWFGRPVDKI-VETGENYE------QDEETKKTVSKLHQVLRPYLLR 1000
FAD + F +WF D + + +G N E DE K +S LH +L+P+LLR
Sbjct: 403 -----FADFEIFNKWF--DFDSLNLGSGSNSEALNKLINDELQKNLISNLHTILKPFLLR 455
Query: 1001 RLKADV-EKQMPGKYEHIIYCRLSKRQRFLY 1030
RLK V +P K E+II C ++ Q Y
Sbjct: 456 RLKKVVLANILPPKREYIINCPMTSAQEKFY 486
Score = 139 bits (349), Expect = 5e-32
Identities = 66/139 (47%), Positives = 94/139 (67%), Gaps = 1/139 (0%)
Query: 1326 GHRALIFTQMTKVLDILEQFLNFHGYLYMRLDGATKIEDRQILTERFNSDP-RITVFILS 1384
GH+ LI++Q +LD++E + + + + R+DG+ E R+ E+FNS + +F+LS
Sbjct: 619 GHKVLIYSQFVNMLDLIEDWCDLNSFATFRIDGSVNNETRKDQLEKFNSSKDKHNIFLLS 678
Query: 1385 SRSGGLGINLTGADTVIFYDSDWNPAMDKQCQDRCHRIGQTRDVHIYRFVSDHTIESNIL 1444
+R+ GLGINL GADTV+ +DSDWNP +D Q DRCHRIGQ V +YR D+TIE IL
Sbjct: 679 TRAAGLGINLVGADTVVLFDSDWNPQVDLQAMDRCHRIGQESPVIVYRLCCDNTIEHVIL 738
Query: 1445 KKANQKRHLDNVVIQTGDF 1463
+A KR+L+ +VIQ G F
Sbjct: 739 TRAANKRNLERMVIQMGKF 757
>SPAC3G6.12 [L] KOG0388 SNF2 family DNA-dependent ATPase
Length = 1063
Score = 215 bits (547), Expect = 5e-55
Identities = 110/247 (44%), Positives = 151/247 (60%), Gaps = 21/247 (8%)
Query: 754 DVPVPSLLRGTLRIYQKQGLNWLASLYNNKTNGILADEMGLGKTIQTISLLAYLACEKEN 813
+V P +L L+ YQ +GLNWLA+LY NGILADEMGLGKT+Q+IS++AYLA
Sbjct: 831 EVKQPKMLMCKLKEYQLKGLNWLANLYEQGINGILADEMGLGKTVQSISVMAYLAETHNI 890
Query: 814 WGPHLIVVPTSVLLNWEMEFKRFAPGFKVLTYYGSPQQRREKRKGW-------NKPDAFH 866
WGP L++ P S L NW+ E RF P K + Y+GS + R+ RK W ++ FH
Sbjct: 891 WGPFLVIAPASTLHNWQQEITRFVPKLKCIPYWGSTKDRKILRKFWCRKNMTYDENSPFH 950
Query: 867 VCITSYQLVVHDQHSFKRKKWQYMILDEAHNIKNFRSTRWQALLNFNTERRLLLTGTPLQ 926
V +TSYQLVV D F+ KWQYMILDEA IK+ S+RW++LL F RLLLTGTP+Q
Sbjct: 951 VVVTSYQLVVLDAQYFQSVKWQYMILDEAQAIKSSSSSRWKSLLAFKCRNRLLLTGTPIQ 1010
Query: 927 NNLAELWSLLYFLMPQTALENGKVSGFADLDAFQQWFGRPVDKIVETGENYEQDEETKKT 986
N + ELW+LL+F+MP S F + F +WF + ++ ++ + +
Sbjct: 1011 NTMQELWALLHFIMP---------SLFDSHNEFSEWFSKDIESHAQSNTQLNEQQ----- 1056
Query: 987 VSKLHQV 993
+ +LH +
Sbjct: 1057 LKRLHMI 1063
>Hs14149730 [B] KOG0389 SNF2 family DNA-dependent ATPase
Length = 1026
Score = 214 bits (546), Expect = 7e-55
Identities = 129/318 (40%), Positives = 183/318 (56%), Gaps = 22/318 (6%)
Query: 754 DVPVPSLLRGTLRI--YQKQGLNWLASLYNNKTNGILADEMGLGKTIQTISLLAYLACEK 811
++ PS+L +L + YQK GLNWLA ++ + NGILADEMGLGKTIQ I+ LAYL E
Sbjct: 484 NIEQPSILNQSLSLKPYQKVGLNWLALVHKHGLNGILADEMGLGKTIQAIAFLAYLYQEG 543
Query: 812 ENWGPHLIVVPTSVLLNWEMEFKRFAPGFKVLTYYGSPQQRREKRKG-WNKPDAFHVCIT 870
N GPHLIVVP S + NW E + P KVL YYGS ++R++ R ++ + ++V +T
Sbjct: 544 NN-GPHLIVVPASTIDNWLREVNLWCPTLKVLCYYGSQEERKQIRFNIHSRYEDYNVIVT 602
Query: 871 SYQLVVH---DQHSFKRKKWQYMILDEAHNIKNFRSTRWQALLNFNTERRLLLTGTPLQN 927
+Y + D+ F+R K Y I DE H +KN S R+Q L+ N RLLLTGTP+QN
Sbjct: 603 TYNCAISSSDDRSLFRRLKLNYAIFDEGHMLKNMGSIRYQHLMTINANNRLLLTGTPVQN 662
Query: 928 NLAELWSLLYFLMPQTALENGKVSGFADLDAFQQWFGRPVDKIVETGENYEQDEETKKTV 987
NL EL SLL F+MP + ++ F +T EQ K+ +
Sbjct: 663 NLLELMSLLNFVMPHMF--------SSSTSEIRRMFSS------KTKSADEQSIYEKERI 708
Query: 988 SKLHQVLRPYLLRRLKADVEKQMPGKYEHIIYCRLSKRQRFLYDDFMSRAQTKETLASGN 1047
+ Q+++P++LRR+K +V KQ+P K + I C +S++Q LY +R + N
Sbjct: 709 AHAKQIIKPFILRRVKEEVLKQLPPKKDRIELCAMSEKQEQLYLGLFNRLKKSINNLEKN 768
Query: 1048 FMSIINCLMQLRKVCNHP 1065
+ N +MQLRK+ NHP
Sbjct: 769 -TEMCNVMMQLRKMANHP 785
Score = 135 bits (339), Expect = 7e-31
Identities = 68/139 (48%), Positives = 94/139 (66%), Gaps = 2/139 (1%)
Query: 1326 GHRALIFTQMTKVLDILEQFLNFHGYLYMRLDGATKIEDRQILTERFNSDPRITVFILSS 1385
G R ++F+Q T +LDILE L H + Y+RLDG T+I +R L + FN+D I VF+LS+
Sbjct: 870 GDRVVLFSQFTMMLDILEVLLKHHQHRYLRLDGKTQISERIHLIDEFNTDMDIFVFLLST 929
Query: 1386 RSGGLGINLTGADTVIFYDSDWNPAMDKQCQDRCHRIGQTRDVHIYRFVSDHTIESNILK 1445
++GGLGINLT A+ VI +D D NP DKQ +DRCHR+GQT++V + + +S TIE ++LK
Sbjct: 930 KAGGLGINLTSANVVILHDIDCNPYNDKQAEDRCHRVGQTKEVLVIKLISQGTIEESMLK 989
Query: 1446 KANQKRHL--DNVVIQTGD 1462
QK L D + GD
Sbjct: 990 INQQKLKLEQDMTTVDEGD 1008
>Hs4557451 [R] KOG0383 Predicted helicase
Length = 1944
Score = 213 bits (543), Expect = 1e-54
Identities = 132/328 (40%), Positives = 178/328 (54%), Gaps = 44/328 (13%)
Query: 763 GTLRIYQKQGLNWLASLYNNKTNGILADEMGLGKTIQTISLLAYLACEKENWGPHLIVVP 822
GTL +YQ +GLNWL + T+ ILADEMGLGKTIQTI L L E GP L+ P
Sbjct: 734 GTLHMYQLEGLNWLRFSWAQGTDTILADEMGLGKTIQTIVFLYSLYKEGHTKGPFLVSAP 793
Query: 823 TSVLLNWEMEFKRFAPGFKVLTYYGSPQQR---REKR--------KGWNK--------PD 863
S ++NWE EF+ +AP F V+TY G R RE KG K
Sbjct: 794 LSTIINWEREFQMWAPKFYVVTYTGDKDSRAIIRENEFSFEDNAIKGGKKAFKMKREAQV 853
Query: 864 AFHVCITSYQLVVHDQHSFKRKKWQYMILDEAHNIKNFRSTRWQALLNFNTERRLLLTGT 923
FHV +TSY+L+ DQ + +W +++DEAH +KN +S ++ L + + +LLLTGT
Sbjct: 854 KFHVLLTSYELITIDQAALGSIRWACLVVDEAHRLKNNQSKFFRVLNGYKIDHKLLLTGT 913
Query: 924 PLQNNLAELWSLLYFLMPQTALENGKVSGFADLDAFQQWFGRPVDKIVETGENYEQDEET 983
PLQNNL EL+ LL FL P+ F +L+ F + F D
Sbjct: 914 PLQNNLEELFHLLNFLTPER---------FNNLEGFLEEFA---------------DISK 949
Query: 984 KKTVSKLHQVLRPYLLRRLKADVEKQMPGKYEHIIYCRLSKRQRFLYDDFMSR-AQTKET 1042
+ + KLH +L P++LRRLKADV K MP K E I+ LS Q+ Y ++R + +
Sbjct: 950 EDQIKKLHDLLGPHMLRRLKADVFKNMPAKTELIVRVELSPMQKKYYKYILTRNFEALNS 1009
Query: 1043 LASGNFMSIINCLMQLRKVCNHPDLFEV 1070
GN +S++N +M L+K CNHP LF V
Sbjct: 1010 RGGGNQVSLLNIMMDLKKCCNHPYLFPV 1037
Score = 135 bits (339), Expect = 7e-31
Identities = 70/139 (50%), Positives = 93/139 (66%), Gaps = 1/139 (0%)
Query: 1324 DNGHRALIFTQMTKVLDILEQFLNFHGYLYMRLDGATKIEDRQILTERFNSD-PRITVFI 1382
+ GHR LIF+QMTK+LD+LE FL++ GY Y R+DG RQ +RFN+ + F+
Sbjct: 1074 EQGHRVLIFSQMTKMLDLLEDFLDYEGYKYERIDGGITGALRQEAIDRFNAPGAQQFCFL 1133
Query: 1383 LSSRSGGLGINLTGADTVIFYDSDWNPAMDKQCQDRCHRIGQTRDVHIYRFVSDHTIESN 1442
LS+R+GGLGINL ADTVI +DSDWNP D Q R HRIGQ V IYRFV+ ++E
Sbjct: 1134 LSTRAGGLGINLATADTVIIFDSDWNPHNDIQAFSRAHRIGQANKVMIYRFVTRASVEER 1193
Query: 1443 ILKKANQKRHLDNVVIQTG 1461
I + A +K L ++V++ G
Sbjct: 1194 ITQVAKRKMMLTHLVVRPG 1212
>Hs20533808 [R] KOG0383 Predicted helicase
Length = 1954
Score = 212 bits (539), Expect = 4e-54
Identities = 128/331 (38%), Positives = 181/331 (54%), Gaps = 44/331 (13%)
Query: 763 GTLRIYQKQGLNWLASLYNNKTNGILADEMGLGKTIQTISLLAYLACEKENWGPHLIVVP 822
GTL YQ +GLNWL + T+ ILADEMGLGKT+QTI L L E + GP+L+ P
Sbjct: 698 GTLHPYQLEGLNWLRFSWAQGTDTILADEMGLGKTVQTIVFLYSLYKEGHSKGPYLVSAP 757
Query: 823 TSVLLNWEMEFKRFAPGFKVLTYYGSPQQR---------------REKRKGWNKPD---- 863
S ++NWE EF+ +AP F V+TY G + R R +K +
Sbjct: 758 LSTIINWEREFEMWAPDFYVVTYTGDKESRSVIRENEFSFEDNAIRSGKKVFRMKKEVQI 817
Query: 864 AFHVCITSYQLVVHDQHSFKRKKWQYMILDEAHNIKNFRSTRWQALLNFNTERRLLLTGT 923
FHV +TSY+L+ DQ +W +++DEAH +KN +S ++ L ++ + +LLLTGT
Sbjct: 818 KFHVLLTSYELITIDQAILGSIEWACLVVDEAHRLKNNQSKFFRVLNSYKIDYKLLLTGT 877
Query: 924 PLQNNLAELWSLLYFLMPQTALENGKVSGFADLDAFQQWFGRPVDKIVETGENYEQDEET 983
PLQNNL EL+ LL FL P+ F +L+ F + F D
Sbjct: 878 PLQNNLEELFHLLNFLTPER---------FNNLEGFLEEFA---------------DISK 913
Query: 984 KKTVSKLHQVLRPYLLRRLKADVEKQMPGKYEHIIYCRLSKRQRFLYDDFMSR-AQTKET 1042
+ + KLH +L P++LRRLKADV K MP K E I+ LS+ Q+ Y ++R + +
Sbjct: 914 EDQIKKLHDLLGPHMLRRLKADVFKNMPAKTELIVRVELSQMQKKYYKFILTRNFEALNS 973
Query: 1043 LASGNFMSIINCLMQLRKVCNHPDLFEVRPI 1073
GN +S++N +M L+K CNHP LF V +
Sbjct: 974 KGGGNQVSLLNIMMDLKKCCNHPYLFPVAAV 1004
Score = 140 bits (354), Expect = 1e-32
Identities = 79/167 (47%), Positives = 103/167 (61%), Gaps = 2/167 (1%)
Query: 1324 DNGHRALIFTQMTKVLDILEQFLNFHGYLYMRLDGATKIEDRQILTERFNSD-PRITVFI 1382
D GHR LIF+QMTK+LD+LE FL + GY Y R+DG RQ +RFN+ + F+
Sbjct: 1038 DEGHRVLIFSQMTKMLDLLEDFLEYEGYKYERIDGGITGGLRQEAIDRFNAPGAQQFCFL 1097
Query: 1383 LSSRSGGLGINLTGADTVIFYDSDWNPAMDKQCQDRCHRIGQTRDVHIYRFVSDHTIESN 1442
LS+R+GGLGINL ADTVI YDSDWNP D Q R HRIGQ + V IYRFV+ ++E
Sbjct: 1098 LSTRAGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQNKKVMIYRFVTRASVEER 1157
Query: 1443 ILKKANQKRHLDNVVIQTG-DFTTDYFTKLSVKDLLGAEAPEDIPDD 1488
I + A +K L ++V++ G + TK + D+L E DD
Sbjct: 1158 ITQVAKRKMMLTHLVVRPGLGSKSGSMTKQELDDILKFGTEELFKDD 1204
>YER164w [K] KOG0384 Chromodomain-helicase DNA-binding protein
Length = 1468
Score = 209 bits (533), Expect = 2e-53
Identities = 119/325 (36%), Positives = 185/325 (56%), Gaps = 34/325 (10%)
Query: 755 VPVPSLLRGTLRIYQKQGLNWLASLYNNKTNGILADEMGLGKTIQTISLLAYLACEKENW 814
V P + G LR +Q G+NW+A L++ NGILADEMGLGKT+QT++ +++L +
Sbjct: 366 VQPPFIKGGELRDFQLTGINWMAFLWSKGDNGILADEMGLGKTVQTVAFISWLIFARRQN 425
Query: 815 GPHLIVVPTSVLLNWEMEFKRFAPGFKVLTYYGSPQQR---------REKRKGWNKPDAF 865
GPH+IVVP S + W F+++AP + Y G+ + R R K F
Sbjct: 426 GPHIIVVPLSTMPAWLDTFEKWAPDLNCICYMGNQKSRDTIREYEFYTNPRAKGKKTMKF 485
Query: 866 HVCITSYQLVVHDQHSFKRKKWQYMILDEAHNIKNFRSTRWQALLNFNTERRLLLTGTPL 925
+V +T+Y+ ++ D+ KWQ+M +DEAH +KN S+ +++L +F R+L+TGTPL
Sbjct: 486 NVLLTTYEYILKDRAELGSIKWQFMAVDEAHRLKNAESSLYESLNSFKVANRMLITGTPL 545
Query: 926 QNNLAELWSLLYFLMPQTALENGKVSGFADLDAFQQWFGRPVDKIVETGENYEQDEETKK 985
QNN+ EL +L+ FLMP G+ + ++D EN QDEE ++
Sbjct: 546 QNNIKELAALVNFLMP------GRFTIDQEIDF----------------EN--QDEEQEE 581
Query: 986 TVSKLHQVLRPYLLRRLKADVEKQMPGKYEHIIYCRLSKRQRFLYDDFMSRAQTKETL-A 1044
+ LH+ ++P++LRRLK DVEK +P K E I+ LS Q Y + +++ + T A
Sbjct: 582 YIHDLHRRIQPFILRRLKKDVEKSLPSKTERILRVELSDVQTEYYKNILTKNYSALTAGA 641
Query: 1045 SGNFMSIINCLMQLRKVCNHPDLFE 1069
G S++N + +L+K NHP LF+
Sbjct: 642 KGGHFSLLNIMNELKKASNHPYLFD 666
Score = 135 bits (339), Expect = 7e-31
Identities = 69/147 (46%), Positives = 93/147 (62%), Gaps = 1/147 (0%)
Query: 1325 NGHRALIFTQMTKVLDILEQFLNFHGYLYMRLDGATKIEDRQILTERFNS-DPRITVFIL 1383
+GHR LIF+QM ++LDIL +L+ G + RLDG R+I + FNS D VF+L
Sbjct: 710 DGHRVLIFSQMVRMLDILGDYLSIKGINFQRLDGTVPSAQRRISIDHFNSPDSNDFVFLL 769
Query: 1384 SSRSGGLGINLTGADTVIFYDSDWNPAMDKQCQDRCHRIGQTRDVHIYRFVSDHTIESNI 1443
S+R+GGLGINL ADTV+ +DSDWNP D Q R HRIGQ V +YR VS T+E +
Sbjct: 770 STRAGGLGINLMTADTVVIFDSDWNPQADLQAMARAHRIGQKNHVMVYRLVSKDTVEEEV 829
Query: 1444 LKKANQKRHLDNVVIQTGDFTTDYFTK 1470
L++A +K L+ +I G + +TK
Sbjct: 830 LERARKKMILEYAIISLGVTDGNKYTK 856
>SPAC3G6.01 [K] KOG0384 Chromodomain-helicase DNA-binding protein
Length = 1388
Score = 208 bits (529), Expect = 6e-53
Identities = 119/314 (37%), Positives = 178/314 (55%), Gaps = 31/314 (9%)
Query: 763 GTLRIYQKQGLNWLASLYNNKTNGILADEMGLGKTIQTISLLAYLACEKENWGPHLIVVP 822
G LR +Q G+NW+A L++ NGILADEMGLGKT+QT++ L+YLA GP L+VVP
Sbjct: 373 GELRDFQLTGVNWMAYLWHKNENGILADEMGLGKTVQTVAFLSYLAHSLRQHGPFLVVVP 432
Query: 823 TSVLLNWEMEFKRFAPGFKVLTYYGSPQQRREKRK-----GWNKPDAFHVCITSYQLVVH 877
S + W+ +A ++Y G+ R+ R + F++ +T+Y+ V+
Sbjct: 433 LSTVPAWQETLALWASDMNCISYLGNTTSRQVIRDYEFYVDGTQKIKFNLLLTTYEYVLK 492
Query: 878 DQHSFKRKKWQYMILDEAHNIKNFRSTRWQALLNFNTERRLLLTGTPLQNNLAELWSLLY 937
D+ KWQYM +DEAH +KN S+ ++AL F RLL+TGTPLQNN+ EL +L+
Sbjct: 493 DRSVLSNIKWQYMAIDEAHRLKNSESSLYEALSQFKNSNRLLITGTPLQNNIRELAALVD 552
Query: 938 FLMPQTALENGKVSGFADLDAFQQWFGRPVDKIVETGENYEQDEETKKTVSKLHQVLRPY 997
FLMP GK +I E DEE + + L + L+PY
Sbjct: 553 FLMP------GKF------------------EIREEINLEAPDEEQEAYIRSLQEHLQPY 588
Query: 998 LLRRLKADVEKQMPGKYEHIIYCRLSKRQRFLYDDFMSR--AQTKETLASGNFMSIINCL 1055
+LRRLK DVEK +P K E I+ LS Q + Y + ++R ++++SG+ +S++N +
Sbjct: 589 ILRRLKKDVEKSLPSKSERILRVELSDLQMYWYKNILTRNYRVLTQSISSGSQISLLNIV 648
Query: 1056 MQLRKVCNHPDLFE 1069
++L+K NHP LF+
Sbjct: 649 VELKKASNHPYLFD 662
Score = 130 bits (326), Expect = 2e-29
Identities = 66/138 (47%), Positives = 90/138 (64%), Gaps = 1/138 (0%)
Query: 1325 NGHRALIFTQMTKVLDILEQFLNFHGYLYMRLDGATKIEDRQILTERFNS-DPRITVFIL 1383
+GHR LIF+QM ++LDIL +L+ GY + RLDG R+ + FN+ + VF+L
Sbjct: 705 DGHRVLIFSQMVRMLDILGDYLSLRGYPHQRLDGTVPAAVRRTSIDHFNAPNSPDFVFLL 764
Query: 1384 SSRSGGLGINLTGADTVIFYDSDWNPAMDKQCQDRCHRIGQTRDVHIYRFVSDHTIESNI 1443
S+R+GGLGINL ADTVI +DSDWNP D Q R HRIGQ V +YR +S TIE ++
Sbjct: 765 STRAGGLGINLMTADTVIIFDSDWNPQADLQAMARAHRIGQKNHVMVYRLLSKDTIEEDV 824
Query: 1444 LKKANQKRHLDNVVIQTG 1461
L++A +K L+ +I G
Sbjct: 825 LERARRKMILEYAIISLG 842
>Hs4557449 [K] KOG0384 Chromodomain-helicase DNA-binding protein
Length = 1739
Score = 206 bits (525), Expect = 2e-52
Identities = 122/310 (39%), Positives = 176/310 (56%), Gaps = 39/310 (12%)
Query: 765 LRIYQKQGLNWLASLYNNKTNGILADEMGLGKTIQTISLLAYLACEKENWGPHLIVVPTS 824
LR YQ +GLNWLA + + ILADEMGLGKTIQTIS L+YL + + +GP LIVVP S
Sbjct: 484 LRDYQLEGLNWLAHSWCKNNSVILADEMGLGKTIQTISFLSYLFHQHQLYGPFLIVVPLS 543
Query: 825 VLLNWEMEFKRFAPGFKVLTYYGSPQQRREKRK-----GWNKPDAFHVCITSYQLVVHDQ 879
L +W+ EF+ +AP V+ Y G R R+ K F+ IT+Y++++ D+
Sbjct: 544 TLTSWQREFEIWAPEINVVVYIGDLMSRNTIREYEWIHSQTKRLKFNALITTYEILLKDK 603
Query: 880 HSFKRKKWQYMILDEAHNIKNFRSTRWQALLNFNTERRLLLTGTPLQNNLAELWSLLYFL 939
W ++ +DEAH +KN S ++ L++F + RLL+TGTPLQN+L ELWSLL+F+
Sbjct: 604 TVLGSINWAFLGVDEAHRLKNDDSLLYKTLIDFKSNHRLLITGTPLQNSLKELWSLLHFI 663
Query: 940 MPQTALENGKVSGFADLDAFQQWFGRPVDKIVETGENYEQD--EETKKTVSKLHQVLRPY 997
MP + F+ W E++E+D + + LH+VL P+
Sbjct: 664 MP---------------EKFEFW------------EDFEEDHGKGRENGYQSLHKVLEPF 696
Query: 998 LLRRLKADVEKQMPGKYEHIIYCRLSKRQRFLYDDFMSR---AQTKETLASGNFMSIINC 1054
LLRR+K DVEK +P K E I+ +S Q+ Y ++R A K T G+ +N
Sbjct: 697 LLRRVKKDVEKSLPAKVEQILRVEMSALQKQYYKWILTRNYKALAKGT--RGSTSGFLNI 754
Query: 1055 LMQLRKVCNH 1064
+M+L+K CNH
Sbjct: 755 VMELKKCCNH 764
Score = 138 bits (347), Expect = 8e-32
Identities = 70/142 (49%), Positives = 97/142 (68%), Gaps = 1/142 (0%)
Query: 1324 DNGHRALIFTQMTKVLDILEQFLNFHGYLYMRLDGATKIEDRQILTERFNSD-PRITVFI 1382
+ G+R LIF+QM ++LDIL ++L Y + RLDG+ K E R+ + FN+D F+
Sbjct: 805 ERGNRVLIFSQMVRMLDILAEYLTIKHYPFQRLDGSIKGEIRKQALDHFNADGSEDFCFL 864
Query: 1383 LSSRSGGLGINLTGADTVIFYDSDWNPAMDKQCQDRCHRIGQTRDVHIYRFVSDHTIESN 1442
LS+R+GGLGINL ADTV+ +DSDWNP D Q Q R HRIGQ + V+IYR V+ T+E
Sbjct: 865 LSTRAGGLGINLASADTVVIFDSDWNPQNDLQAQARAHRIGQKKQVNIYRLVTKGTVEEE 924
Query: 1443 ILKKANQKRHLDNVVIQTGDFT 1464
I+++A +K LD++VIQ D T
Sbjct: 925 IIERAKKKMVLDHLVIQRMDTT 946
>At2g25170 [R] KOG0383 Predicted helicase
Length = 1359
Score = 205 bits (522), Expect = 4e-52
Identities = 130/338 (38%), Positives = 189/338 (55%), Gaps = 50/338 (14%)
Query: 761 LRGTLRIYQKQGLNWLASLYNNKTNGILADEMGLGKTIQTISLLAYLACEKENWGPHLIV 820
+ G L YQ +GLN+L ++ +T+ ILADEMGLGKTIQ+I+LLA L +EN PHL++
Sbjct: 269 IEGLLHPYQLEGLNFLRFSWSKQTHVILADEMGLGKTIQSIALLASLF--EENLIPHLVI 326
Query: 821 VPTSVLLNWEMEFKRFAPGFKVLTYYGSPQQR-----------------REKRKGWNKPD 863
P S L NWE EF +AP V+ Y+G+ Q R ++K+ G +
Sbjct: 327 APLSTLRNWEREFATWAPQMNVVMYFGTAQARAVIREHEFYLSKDQKKIKKKKSGQISSE 386
Query: 864 A------FHVCITSYQLVVHDQHSFKRKKWQYMILDEAHNIKNFRSTRWQALLNFNTERR 917
+ F V +TSY+++ D K KW+ MI+DE H +KN S + +L +++ R
Sbjct: 387 SKQKRIKFDVLLTSYEMINLDSAVLKPIKWECMIVDEGHRLKNKDSKLFSSLTQYSSNHR 446
Query: 918 LLLTGTPLQNNLAELWSLLYFLMPQTALENGKVSGFADLDAFQQWFGRPVDKIVETGENY 977
+LLTGTPLQNNL EL+ L++F L+ GK F L+ FQ+ F
Sbjct: 447 ILLTGTPLQNNLDELFMLMHF------LDAGK---FGSLEEFQEEF-------------- 483
Query: 978 EQDEETKKTVSKLHQVLRPYLLRRLKADVEKQMPGKYEHIIYCRLSKRQRFLYDDFMSRA 1037
+D ++ +S+LH++L P+LLRR+K DV K MP K E I+ LS Q+ Y +R
Sbjct: 484 -KDINQEEQISRLHKMLAPHLLRRVKKDVMKDMPPKKELILRVDLSSLQKEYYKAIFTRN 542
Query: 1038 QTKETLASGNFMSIINCLMQLRKVCNHPDLFE-VRPIL 1074
T G +S+ N +M+LRKVC HP + E V P++
Sbjct: 543 YQVLTKKGGAQISLNNIMMELRKVCCHPYMLEGVEPVI 580
Score = 125 bits (315), Expect = 4e-28
Identities = 70/177 (39%), Positives = 100/177 (55%), Gaps = 4/177 (2%)
Query: 1302 KSLLQYDCGXXXXXXXXXXXXXDNGHRALIFTQMTKVLDILEQFLNFHGYLYMRLDGATK 1361
K LL+ CG + GHR LI+TQ +LD+LE + + Y R+DG
Sbjct: 588 KQLLE-SCGKLQLLDKMMVKLKEQGHRVLIYTQFQHMLDLLEDYCTHKKWQYERIDGKVG 646
Query: 1362 IEDRQILTERFNS-DPRITVFILSSRSGGLGINLTGADTVIFYDSDWNPAMDKQCQDRCH 1420
+RQI +RFN+ + F+LS+R+GGLGINL ADTVI YDSDWNP D Q R H
Sbjct: 647 GAERQIRIDRFNAKNSNKFCFLLSTRAGGLGINLATADTVIIYDSDWNPHADLQAMARAH 706
Query: 1421 RIGQTRDVHIYRFVSDHTIESNILKKANQKRHLDNVVIQTGDFTTDYFTKLSVKDLL 1477
R+GQT V IYR ++ TIE +++ +K L+++V+ G T + + D++
Sbjct: 707 RLGQTNKVMIYRLINRGTIEERMMQLTKKKMVLEHLVV--GKLKTQNINQEELDDII 761
>Hs4557453 [R] KOG0383 Predicted helicase
Length = 1912
Score = 205 bits (521), Expect = 5e-52
Identities = 129/328 (39%), Positives = 175/328 (53%), Gaps = 44/328 (13%)
Query: 763 GTLRIYQKQGLNWLASLYNNKTNGILADEMGLGKTIQTISLLAYLACEKENWGPHLIVVP 822
GTL YQ +GLNWL + T+ ILADEMGLGKT+QT L L E + GP L+ P
Sbjct: 724 GTLHPYQMEGLNWLRFSWAQGTDTILADEMGLGKTVQTAVFLYSLYKEGHSKGPFLVSAP 783
Query: 823 TSVLLNWEMEFKRFAPGFKVLTYYGSPQQR---RE-------------KRKGWNKPDA-- 864
S ++NWE EF+ +AP V+TY G R RE K+ K +A
Sbjct: 784 LSTIINWEREFEMWAPDMYVVTYVGDKDSRAIIRENEFSFEDNAIRGGKKASRMKKEASV 843
Query: 865 -FHVCITSYQLVVHDQHSFKRKKWQYMILDEAHNIKNFRSTRWQALLNFNTERRLLLTGT 923
FHV +TSY+L+ D W +I+DEAH +KN +S ++ L ++ + +LLLTGT
Sbjct: 844 KFHVLLTSYELITIDMAILGSIDWACLIVDEAHRLKNNQSKFFRVLNGYSLQHKLLLTGT 903
Query: 924 PLQNNLAELWSLLYFLMPQTALENGKVSGFADLDAFQQWFGRPVDKIVETGENYEQDEET 983
PLQNNL EL+ LL FL P+ F +L+ F + F D
Sbjct: 904 PLQNNLEELFHLLNFLTPER---------FHNLEGFLEEFA---------------DIAK 939
Query: 984 KKTVSKLHQVLRPYLLRRLKADVEKQMPGKYEHIIYCRLSKRQRFLYDDFMSR-AQTKET 1042
+ + KLH +L P++LRRLKADV K MP K E I+ LS Q+ Y ++R +
Sbjct: 940 EDQIKKLHDMLGPHMLRRLKADVFKNMPSKTELIVRVELSPMQKKYYKYILTRNFEALNA 999
Query: 1043 LASGNFMSIINCLMQLRKVCNHPDLFEV 1070
GN +S++N +M L+K CNHP LF V
Sbjct: 1000 RGGGNQVSLLNVVMDLKKCCNHPYLFPV 1027
Score = 137 bits (345), Expect = 1e-31
Identities = 77/167 (46%), Positives = 102/167 (60%), Gaps = 2/167 (1%)
Query: 1324 DNGHRALIFTQMTKVLDILEQFLNFHGYLYMRLDGATKIEDRQILTERFNSD-PRITVFI 1382
+ GHR LIF+QMTK+LD+LE FL GY Y R+DG RQ +RFN+ + F+
Sbjct: 1064 EGGHRVLIFSQMTKMLDLLEDFLEHEGYKYERIDGGITGNMRQEAIDRFNAPGAQQFCFL 1123
Query: 1383 LSSRSGGLGINLTGADTVIFYDSDWNPAMDKQCQDRCHRIGQTRDVHIYRFVSDHTIESN 1442
LS+R+GGLGINL ADTVI YDSDWNP D Q R HRIGQ + V IYRFV+ ++E
Sbjct: 1124 LSTRAGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQNKKVMIYRFVTRASVEER 1183
Query: 1443 ILKKANQKRHLDNVVIQTG-DFTTDYFTKLSVKDLLGAEAPEDIPDD 1488
I + A +K L ++V++ G T +K + D+L E D+
Sbjct: 1184 ITQVAKKKMMLTHLVVRPGLGSKTGSMSKQELDDILKFGTEELFKDE 1230
>ECU10g1320 [K] KOG0385 Chromatin remodeling complex WSTF-ISWI small subunit
Length = 823
Score = 203 bits (517), Expect = 2e-51
Identities = 114/311 (36%), Positives = 171/311 (54%), Gaps = 23/311 (7%)
Query: 758 PSLLRGTLRIYQKQGLNWLASLYNNKTNGILADEMGLGKTIQTISLLAYLACEKENWGPH 817
P + LR YQ +GLNWL +++ N N ILADEMGLGKT+QTI+ L Y+ K+ H
Sbjct: 46 PRFVLYELRDYQIEGLNWLINMHENSINCILADEMGLGKTLQTIAFLGYIRYVKKERKRH 105
Query: 818 LIVVPTSVLLNWEMEFKRFAPGFKVLTYYGSPQQRREKRKGWNKPDAFHVCITSYQLVVH 877
LI++P S L NW EF++F P +KV +Y S ++ R + + + C+T+Y++ ++
Sbjct: 106 LIILPKSTLANWRREFRKFMPNYKVRVFYSSRKEMRREAEE-IMSSRWDACLTTYEMCIN 164
Query: 878 DQHSFKRKKWQYMILDEAHNIKNFRSTRWQALLNFNTERRLLLTGTPLQNNLAELWSLLY 937
+ KW Y+++DEAH IKN S + + F+ + RLL+TGTPLQNN+ ELW+LL
Sbjct: 165 ARSILNTVKWSYIVIDEAHRIKNEHSLLSKIVRIFSCDHRLLITGTPLQNNVHELWALLN 224
Query: 938 FLMPQTALENGKVSGFADLDAFQQWFGRPVDKIVETGENYEQDEETKKTVSKLHQVLRPY 997
F++P+ F D + F+ + DE + + ++ VL+ +
Sbjct: 225 FIVPEI---------FNDAEKFESYV-------------MNIDEGDGEAIRRIRSVLQLF 262
Query: 998 LLRRLKADVEKQMPGKYEHIIYCRLSKRQRFLYDDFMSRAQTKETLASGNFMSIINCLMQ 1057
LRR K DVE +P K +Y +LS QR Y + R + ++N +MQ
Sbjct: 263 FLRREKIDVEMSLPPKKIVNLYSKLSPMQREWYRMLLKRDLSPLGSTRDPKGMLMNVVMQ 322
Query: 1058 LRKVCNHPDLF 1068
LRK CNHP LF
Sbjct: 323 LRKCCNHPYLF 333
Score = 140 bits (352), Expect = 2e-32
Identities = 73/167 (43%), Positives = 109/167 (64%), Gaps = 3/167 (1%)
Query: 1326 GHRALIFTQMTKVLDILEQFLNFHGYLYMRLDGATKIEDRQILTERFNSD-PRITVFILS 1384
G R LIF+QM+ +LDILE + F Y Y R+DG+T DR + FN++ +F+L+
Sbjct: 368 GSRVLIFSQMSMMLDILEDYAMFREYEYCRIDGSTSYRDRTEAIDGFNAEGSEKFLFLLT 427
Query: 1385 SRSGGLGINLTGADTVIFYDSDWNPAMDKQCQDRCHRIGQTRDVHIYRFVSDHTIESNIL 1444
+R+GGLGINL+ ADTVI +DSDWNP MD Q QDR HRIGQ + V ++R +S++T+E I+
Sbjct: 428 TRAGGLGINLSTADTVILFDSDWNPQMDLQAQDRAHRIGQKKQVVVFRLISENTVEERIV 487
Query: 1445 KKANQKRHLDNVVIQTGDFTTDYFTKLSVKDLL--GAEAPEDIPDDK 1489
++ QK LD++++Q + ++ + D+L G E ED D+
Sbjct: 488 YRSLQKLKLDDILLQGRYHRSSSVSQSELIDILANGMEITEDEGKDE 534
>CE03657 [R] KOG0383 Predicted helicase
Length = 1787
Score = 202 bits (514), Expect = 3e-51
Identities = 131/365 (35%), Positives = 183/365 (49%), Gaps = 50/365 (13%)
Query: 724 PKSDNELKDEKAETTESVTSPAAADPLAVSDVPVPSLLRGTLRIYQKQGLNWLASLYNNK 783
PK D K + P +S+ G L YQ +G+NWL ++N
Sbjct: 581 PKEDEVTSRRKKREKIDILKKYEVQPDFISETG------GNLHPYQLEGINWLRHCWSNG 634
Query: 784 TNGILADEMGLGKTIQTISLLAYLACEKENWGPHLIVVPTSVLLNWEMEFKRFAPGFKVL 843
T+ ILADEMGLGKT+Q+++ L L E GP LI P S ++NWE E + + P F V+
Sbjct: 635 TDAILADEMGLGKTVQSLTFLYTLMKEGHTKGPFLIAAPLSTIINWEREAELWCPDFYVV 694
Query: 844 TYYGSPQQRREKR-----------KGWNKPD--------AFHVCITSYQLVVHDQHSFKR 884
TY G + R R +G K FHV +TSY+ + D+
Sbjct: 695 TYVGDRESRMVIREHEFSFVDGAVRGGPKVSKIKTLENLKFHVLLTSYECINMDKAILSS 754
Query: 885 KKWQYMILDEAHNIKNFRSTRWQALLNFNTERRLLLTGTPLQNNLAELWSLLYFLMPQTA 944
W +++DEAH +KN +ST ++ L +N + R+LLTGTPLQNNL EL+ LL FL P
Sbjct: 755 IDWAALVVDEAHRLKNNQSTFFKNLREYNIQYRVLLTGTPLQNNLEELFHLLNFLAPDR- 813
Query: 945 LENGKVSGFADLDAFQQWFGRPVDKIVETGENYEQDEETKKTVSKLHQVLRPYLLRRLKA 1004
F L++F E E ++D+ + KLH +L P++LRRLKA
Sbjct: 814 --------FNQLESF----------TAEFSEISKEDQ-----IEKLHNLLGPHMLRRLKA 850
Query: 1005 DVEKQMPGKYEHIIYCRLSKRQRFLYDDFMSR-AQTKETLASGNFMSIINCLMQLRKVCN 1063
DV MP K E I+ LS Q+ Y + ++R G MS+IN +M+L+K CN
Sbjct: 851 DVLTGMPSKQELIVRVELSAMQKKYYKNILTRNFDALNVKNGGTQMSLINIIMELKKCCN 910
Query: 1064 HPDLF 1068
HP LF
Sbjct: 911 HPYLF 915
Score = 136 bits (342), Expect = 3e-31
Identities = 70/139 (50%), Positives = 92/139 (65%), Gaps = 1/139 (0%)
Query: 1324 DNGHRALIFTQMTKVLDILEQFLNFHGYLYMRLDGATKIEDRQILTERFNSD-PRITVFI 1382
D GHR LIF+QMT +LDILE F + GY Y R+DG+ + RQ +R+N+ + VF+
Sbjct: 954 DGGHRVLIFSQMTMMLDILEDFCDVEGYKYERIDGSITGQQRQDAIDRYNAPGAKQFVFL 1013
Query: 1383 LSSRSGGLGINLTGADTVIFYDSDWNPAMDKQCQDRCHRIGQTRDVHIYRFVSDHTIESN 1442
LS+R+GGLGINL ADTVI YDSDWNP D Q R HR+GQ V IYRFV+ ++E
Sbjct: 1014 LSTRAGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRLGQKHKVMIYRFVTKGSVEER 1073
Query: 1443 ILKKANQKRHLDNVVIQTG 1461
I A +K L ++V++ G
Sbjct: 1074 ITSVAKKKMLLTHLVVRAG 1092
>SPAC1783.05 [K] KOG0384 Chromodomain-helicase DNA-binding protein
Length = 1373
Score = 202 bits (513), Expect = 4e-51
Identities = 119/322 (36%), Positives = 180/322 (54%), Gaps = 37/322 (11%)
Query: 758 PSLLRG-TLRIYQKQGLNWLASLYNNKTNGILADEMGLGKTIQTISLLAYLACEKENWGP 816
PS ++G +R +Q G+NW+A L++ NGILADEMGLGKT+QT+ L+YL + GP
Sbjct: 382 PSYIKGGEIRDFQLTGINWMAYLWHRNENGILADEMGLGKTVQTVCFLSYLVHSLKQHGP 441
Query: 817 HLIVVPTSVLLNWEMEFKRFAPGFKVLTYYGSPQQRREKRKGW------NKPDAFHVCIT 870
LIVVP S + W+ + P + Y G+ + R R+ ++ F++ +T
Sbjct: 442 FLIVVPLSTVPAWQETLANWTPDLNSICYTGNTESRANIREYEFYLSTNSRKLKFNILLT 501
Query: 871 SYQLVVHDQHSFKRKKWQYMILDEAHNIKNFRSTRWQALLNFNTERRLLLTGTPLQNNLA 930
+Y+ ++ D+ +WQY+ +DEAH +KN S+ ++ L F T RLL+TGTPLQNNL
Sbjct: 502 TYEYILKDKQELNNIRWQYLAIDEAHRLKNSESSLYETLSQFRTANRLLITGTPLQNNLK 561
Query: 931 ELWSLLYFLMPQTALENGKVSGFADLDAFQQWFGRPVDKIVETGENYEQ-DEETKKTVSK 989
EL SL+ FLMP GK + N++Q + E ++ +
Sbjct: 562 ELASLVNFLMP------GKF-------------------YIRDELNFDQPNAEQERDIRD 596
Query: 990 LHQVLRPYLLRRLKADVEKQMPGKYEHIIYCRLSKRQRFLYDDFMS---RAQTKETLASG 1046
L + L+P++LRRLK DVEK +P K E I+ LS Q Y + ++ RA T T G
Sbjct: 597 LQERLQPFILRRLKKDVEKSLPSKSERILRVELSDMQTEWYKNILTKNYRALTGHTDGRG 656
Query: 1047 NFMSIINCLMQLRKVCNHPDLF 1068
+S++N +++L+KV NHP LF
Sbjct: 657 Q-LSLLNIVVELKKVSNHPYLF 677
Score = 137 bits (345), Expect = 1e-31
Identities = 67/138 (48%), Positives = 94/138 (67%), Gaps = 1/138 (0%)
Query: 1325 NGHRALIFTQMTKVLDILEQFLNFHGYLYMRLDGATKIEDRQILTERFNS-DPRITVFIL 1383
+GHR LIF+QM ++L+IL ++++ GY Y RLDG R++ + FN+ D VF+L
Sbjct: 719 DGHRVLIFSQMVRMLNILGEYMSLRGYNYQRLDGTIPASVRRVSIDHFNAPDSPDFVFLL 778
Query: 1384 SSRSGGLGINLTGADTVIFYDSDWNPAMDKQCQDRCHRIGQTRDVHIYRFVSDHTIESNI 1443
S+R+GGLGINL ADTVI +DSDWNP D Q R HRIGQ V++YRF+S T+E +I
Sbjct: 779 STRAGGLGINLNTADTVIIFDSDWNPQADLQAMARAHRIGQKNHVNVYRFLSKDTVEEDI 838
Query: 1444 LKKANQKRHLDNVVIQTG 1461
L++A +K L+ +I G
Sbjct: 839 LERARRKMILEYAIISLG 856
>Hs20536191 [K] KOG0385 Chromatin remodeling complex WSTF-ISWI small subunit
Length = 897
Score = 201 bits (510), Expect = 1e-50
Identities = 113/305 (37%), Positives = 174/305 (57%), Gaps = 21/305 (6%)
Query: 765 LRIYQKQGLNWLASLYNNKTNGILADEMGLGKTIQTISLLAYLACEKENWGPHLIVVPTS 824
LR YQ +G+NWLA ++ + IL DEMGLGKT QTI+L YLA + GP LI+ P S
Sbjct: 46 LRSYQLEGVNWLAQRFHCQNGCILGDEMGLGKTCQTIALFIYLAGRLNDEGPFLILCPLS 105
Query: 825 VLLNWEMEFKRFAPGFKVLTYYGSPQQRREKRKGWNKPDAFHVCITSYQLVVHDQHSFKR 884
VL NW+ E +RFAPG +TY G ++R ++ + FHV +T+Y++ + D K
Sbjct: 106 VLSNWKEEMQRFAPGLSCVTYAGDKEERACLQQDLKQESRFHVLLTTYEICLKDASFLKS 165
Query: 885 KKWQYMILDEAHNIKNFRSTRWQALLNFNTERRLLLTGTPLQNNLAELWSLLYFLMPQTA 944
W +++DEAH +KN S + L F+ LLLTGTP+QN+L EL+SLL F+ P
Sbjct: 166 FPWSVLVVDEAHRLKNQSSLLHKTLSEFSVVFSLLLTGTPIQNSLQELYSLLSFVEP--- 222
Query: 945 LENGKVSGFADLDAFQQWFGRPVDKIVETGENYEQDEETKKTVSKLHQVLRPYLLRRLKA 1004
D F + +++ + + Y+ E+ ++ ++LH++L+P+LLRR+KA
Sbjct: 223 ------------DLFSK------EEVGDFIQRYQDIEKESESGNELHKLLQPFLLRRVKA 264
Query: 1005 DVEKQMPGKYEHIIYCRLSKRQRFLYDDFMSRAQTKETLASGNFMSIINCLMQLRKVCNH 1064
+V ++P K E +IY +S Q+ Y + + + + + N L QLRK +H
Sbjct: 265 EVATELPKKTEVVIYHGMSALQKKYYKAILMKDLDAFENETAKKVKLQNILSQLRKCVDH 324
Query: 1065 PDLFE 1069
P LF+
Sbjct: 325 PYLFD 329
Score = 140 bits (352), Expect = 2e-32
Identities = 66/139 (47%), Positives = 96/139 (68%), Gaps = 1/139 (0%)
Query: 1326 GHRALIFTQMTKVLDILEQFLNFHGYLYMRLDGATKIEDRQILTERFNSDPRITVFILSS 1385
GHR L+F+QMT++LDIL+ ++++ GY Y R+DG+ + E+R + + F P I VF+LS+
Sbjct: 363 GHRVLLFSQMTQMLDILQDYMDYRGYSYERVDGSVRGEERHLAIKNFGQQP-IFVFLLST 421
Query: 1386 RSGGLGINLTGADTVIFYDSDWNPAMDKQCQDRCHRIGQTRDVHIYRFVSDHTIESNILK 1445
R+GG+G+NLT ADTVIF DSD+NP D Q R HRIGQ + V + R + T+E + +
Sbjct: 422 RAGGVGMNLTAADTVIFVDSDFNPQNDLQAAARAHRIGQNKSVKVIRLIGRDTVEEIVYR 481
Query: 1446 KANQKRHLDNVVIQTGDFT 1464
KA K L N++I+ G FT
Sbjct: 482 KAASKLQLTNMIIEGGHFT 500
>CE11572 [K] KOG0384 Chromodomain-helicase DNA-binding protein
Length = 1465
Score = 197 bits (500), Expect = 1e-49
Identities = 124/359 (34%), Positives = 188/359 (51%), Gaps = 42/359 (11%)
Query: 716 KTEELPSPPKSDNEL-KDEKAETTESVTSPAAADPLAVSDVPVPSLLRGTLRIYQKQGLN 774
+ E L SP K+ N L K K E ES+ D + LR YQ +GLN
Sbjct: 365 RIENLKSPNKNSNVLRKRPKFEKFESMPDFLKTDGESTHK----------LRDYQLEGLN 414
Query: 775 WLASLYNNKTNGILADEMGLGKTIQTISLLAYLACEKENWGPHLIVVPTSVLLNWEMEFK 834
W+ + + ILADEMGLGKTIQ+ISLLA L + GP+L+VVP S + W+ EF
Sbjct: 415 WMVYAWCKGNSSILADEMGLGKTIQSISLLASLFHRYDLAGPYLVVVPLSTMAAWQKEFA 474
Query: 835 RFAPGFKVLTYYGSPQQRREKRK-----GWNKPDAFHVCITSYQLVVHDQHSFKRKKWQY 889
++AP ++ Y G R R+ G K + +T+Y++++ D+ W
Sbjct: 475 QWAPEMNLVVYMGDVVSRDMIRQYEWFVGGTKKMKINAILTTYEILLKDKAFLSSIDWAA 534
Query: 890 MILDEAHNIKNFRSTRWQALLNFNTERRLLLTGTPLQNNLAELWSLLYFLMPQTALENGK 949
+++DEAH +KN S +++L F +LL+TGTPLQN+L ELW+LL+F+MP+
Sbjct: 535 LLVDEAHRLKNDESLLYKSLTQFRFNHKLLITGTPLQNSLKELWALLHFIMPE------- 587
Query: 950 VSGFADLDAFQQWFGRPVDKIVETGENYEQDEETKKTVSKLHQVLRPYLLRRLKADVEKQ 1009
D ++++ ET N E K +S LH+ L P+LLRR+K DVEK
Sbjct: 588 -----KFDCWEEF---------ETAHN----ESNHKGISALHKKLEPFLLRRVKKDVEKS 629
Query: 1010 MPGKYEHIIYCRLSKRQRFLYDDFMSRAQTKETL-ASGNFMSIINCLMQLRKVCNHPDL 1067
+P K E I+ ++ Q+ Y +++ + + G+ +N +M+L+K CNH L
Sbjct: 630 LPPKTEQILRVDMTAHQKQFYKWILTKNYRELSKGVKGSINGFVNLVMELKKCCNHASL 688
Score = 133 bits (334), Expect = 3e-30
Identities = 69/143 (48%), Positives = 97/143 (67%), Gaps = 3/143 (2%)
Query: 1324 DNGHRALIFTQMTKVLDILEQFLNFHGYLYMRLDGATKIEDRQILTERFNSDPRIT--VF 1381
D GHR LIF+QM +LDIL+++L + RLDG+ + + R+ + +N+ P T F
Sbjct: 725 DKGHRVLIFSQMVMMLDILQEYLQLRRFPSQRLDGSMRADLRKQALDHYNA-PGSTDFAF 783
Query: 1382 ILSSRSGGLGINLTGADTVIFYDSDWNPAMDKQCQDRCHRIGQTRDVHIYRFVSDHTIES 1441
+LS+R+GGLGINL ADTVI +DSDWNP D Q R HRIGQT+ V+IYR V+ ++E
Sbjct: 784 LLSTRAGGLGINLATADTVIIFDSDWNPQNDLQAMSRAHRIGQTKTVNIYRLVTKGSVEE 843
Query: 1442 NILKKANQKRHLDNVVIQTGDFT 1464
I+++A +K LD++VIQ D T
Sbjct: 844 EIVERAKRKLVLDHLVIQRMDTT 866
>SPCC1235.05c [B] KOG0389 SNF2 family DNA-dependent ATPase
Length = 1284
Score = 196 bits (499), Expect = 2e-49
Identities = 132/352 (37%), Positives = 188/352 (52%), Gaps = 36/352 (10%)
Query: 739 ESVTSPAAAD---PLAVSDVPVPSLLRGTLRIYQKQGLNWLASLYNNKTNGILADEMGLG 795
ESV + AA + P V++ P L+ YQ G+NWL LY K +GILADEMGLG
Sbjct: 521 ESVPTEAADNSDFPKFVTEQPKTLASDVQLKSYQLVGVNWLHLLYQQKLSGILADEMGLG 580
Query: 796 KTIQTISLLAYLACEKENWGPHLIVVPTSVLLNWEMEFKRFAPGFKVLTYYGSPQQRREK 855
KT Q ++ A L E+ + GPHL+VVP+S L NW E RF P +V YYGS Q+R
Sbjct: 581 KTCQVVAFFA-LLLEQGHHGPHLVVVPSSTLENWLRELARFCPSLRVEPYYGSQQERANI 639
Query: 856 RKGWNKPD-AFHVCITSYQLVVH---DQHSFKRKKWQYMILDEAHNIKNFRSTRWQALLN 911
R+ + + + + +T+YQL + D+ K + + + DE H +KN S R++ L+N
Sbjct: 640 REAIEENEIKYDILVTTYQLATNNKEDRSFLKHQNFDVCVYDEGHYLKNRMSERYKHLMN 699
Query: 912 FNTERRLLLTGTPLQNNLAELWSLLYFLMPQTALENGKVSGFADLDAFQQWFGRPVDKIV 971
N RLLLTGTPLQNNL EL SLL F++P N S DLD + K
Sbjct: 700 LNANFRLLLTGTPLQNNLKELVSLLAFILP-----NMFDSDMDDLDV--------IFKAK 746
Query: 972 ETGE-NYEQDEETKKTVSKLHQVLRPYLLRRLKADVEKQMPGKYEHIIYCRLSKRQRFLY 1030
T + + EQ +K+ +S+ ++ P++LRR K V +P K + I +C+LS+ Q +Y
Sbjct: 747 PTADADIEQALLSKQRISRAKTMMTPFVLRRRKNQVLNDLPKKTQIIEHCKLSENQLEIY 806
Query: 1031 --------------DDFMSRAQTKETLASGNFMSIINCLMQLRKVCNHPDLF 1068
DD ++ + + G +S + LMQLRK NH LF
Sbjct: 807 NRYAALQKNQQLRRDDKRNKRSKNDEESDGKSLSAGHVLMQLRKAANHALLF 858
Score = 131 bits (330), Expect = 7e-30
Identities = 69/157 (43%), Positives = 103/157 (64%), Gaps = 1/157 (0%)
Query: 1324 DNGHRALIFTQMTKVLDILEQFLNFHGYLYMRLDGATKIEDRQILTERFNSDPRITVFIL 1383
+ G R L+F+Q T++LDILEQ L+ Y+RLDG+T++E RQ + ++F+ + +TVF+L
Sbjct: 938 EEGSRILLFSQFTQMLDILEQVLDTLKISYVRLDGSTQVEVRQDIIDQFHKEEDVTVFLL 997
Query: 1384 SSRSGGLGINLTGADTVIFYDSDWNPAMDKQCQDRCHRIGQTRDVHIYRFVSDHTIESNI 1443
S+++GG GINL A+ VI YD +NP D Q +DR HR+GQ R+V + R ++D+TIE I
Sbjct: 998 STKAGGFGINLACANVVILYDCSYNPFDDLQAEDRAHRVGQVREVTVIRLITDNTIEEYI 1057
Query: 1444 LKKANQKRHLDNVVIQTGDFTTDYFTKLSVKDLLGAE 1480
K AN K LD + G + +L V+D+L E
Sbjct: 1058 QKLANTKLALDMSLSSDGKDREEIGERL-VQDMLDEE 1093
>YAL019w [B] KOG0389 SNF2 family DNA-dependent ATPase
Length = 1131
Score = 196 bits (497), Expect = 3e-49
Identities = 152/469 (32%), Positives = 226/469 (47%), Gaps = 48/469 (10%)
Query: 714 NSKTEELPSPPKSDNELKDEKAETTE------SVTSPAAADPLAVSDVPVPSLLRG--TL 765
N + E++ D++ D++ T S TS P+ P LL +L
Sbjct: 513 NDEEEDVEYDDGDDDDDDDDEFVATRKNTHVISTTSRNGRKPIVKFFKGKPRLLSPEISL 572
Query: 766 RIYQKQGLNWLASLYNNKTNGILADEMGLGKTIQTISLLAYLACEKENWGPHLIVVPTSV 825
+ YQ+ G+NWL LY NK + ILAD+MGLGKT Q IS AYL E GPHL+VVP+S
Sbjct: 573 KDYQQTGINWLNLLYQNKMSCILADDMGLGKTCQVISFFAYLKQINEP-GPHLVVVPSST 631
Query: 826 LLNWEMEFKRFAPGFKVLTYYGSPQQRREKRKGWNK-PDAFHVCITSYQLVV---HDQHS 881
L NW EF++FAP K+ YYGS Q+R E R + + V +T+Y L +D
Sbjct: 632 LENWLREFQKFAPALKIEPYYGSLQEREELRDILERNAGKYDVIVTTYNLAAGNKYDVSF 691
Query: 882 FKRKKWQYMILDEAHNIKNFRSTRWQALLNFNTERRLLLTGTPLQNNLAELWSLLYFLMP 941
K + + ++ DE H +KN S R+ L+ RLLLTGTPLQNNL EL SLL F+MP
Sbjct: 692 LKNRNFNVVVYDEGHMLKNSTSERFAKLMKIRANFRLLLTGTPLQNNLKELMSLLEFIMP 751
Query: 942 QTALENGKVSGFADLDAFQQWFGRPVDKIVETGENYEQDEETKKTVSKLHQVLRPYLLRR 1001
+ + ++F F + K + +N+ ++ +++ +++P++LRR
Sbjct: 752 NLFI--------SKKESFDAIFKQRA-KTTDDNKNH-NPLLAQEAITRAKTMMKPFILRR 801
Query: 1002 LKADVEKQMPGKYEHIIYCRLSKRQRFLYD----------------DFMSRAQTKETLAS 1045
K V K +P K+ HI YC L+ Q+ +YD + A+ K L S
Sbjct: 802 RKDQVLKHLPPKHTHIQYCELNAIQKKIYDKEIQIVLEHKRMIKDGELPKDAKEKSKLQS 861
Query: 1046 GNFMSIINCLMQLRKVCNHPDLFE---VRPILTSFCIEDSVSKSYCDLNNYVYNRLHENQ 1102
S N +M LRK HP LF I+T +Y + N Y + +
Sbjct: 862 S---SSKNLIMALRKASLHPLLFRNIYNDKIITKMSDAILDEPAYAENGNKEYIK-EDMS 917
Query: 1103 FETSVDLSNL--NFQFTSNDKTLSTNHSEKISELQCVQPILKEISRLKQ 1149
+ T +L L NF T + L + + ++ ++ +LK I KQ
Sbjct: 918 YMTDFELHKLCCNFPNTLSKYQLHNDEWMQSGKIDALKKLLKTIIVDKQ 966
Score = 122 bits (306), Expect = 5e-27
Identities = 59/134 (44%), Positives = 89/134 (66%)
Query: 1324 DNGHRALIFTQMTKVLDILEQFLNFHGYLYMRLDGATKIEDRQILTERFNSDPRITVFIL 1383
D + LIF+ T+VLDILE L+ Y ++RLDG+T++ DRQ+L ++F D I +FIL
Sbjct: 964 DKQEKVLIFSLFTQVLDILEMVLSTLDYKFLRLDGSTQVNDRQLLIDKFYEDKDIPIFIL 1023
Query: 1384 SSRSGGLGINLTGADTVIFYDSDWNPAMDKQCQDRCHRIGQTRDVHIYRFVSDHTIESNI 1443
S+++GG GINL A+ VI +D +NP D+Q DR HR+GQT++V+I ++ +IE I
Sbjct: 1024 STKAGGFGINLVCANNVIIFDQSFNPHDDRQAADRAHRVGQTKEVNITTLITKDSIEEKI 1083
Query: 1444 LKKANQKRHLDNVV 1457
+ A K LD+ +
Sbjct: 1084 HQLAKNKLALDSYI 1097
>Hs4557447 [K] KOG0384 Chromodomain-helicase DNA-binding protein
Length = 1709
Score = 195 bits (496), Expect = 4e-49
Identities = 116/306 (37%), Positives = 170/306 (54%), Gaps = 31/306 (10%)
Query: 765 LRIYQKQGLNWLASLYNNKTNGILADEMGLGKTIQTISLLAYLACEKENWGPHLIVVPTS 824
LR YQ GLNWLA + + ILADEMGLGKTIQTIS L YL E + +GP L+VVP S
Sbjct: 481 LRDYQLNGLNWLAHSWCKGNSCILADEMGLGKTIQTISFLNYLFHEHQLYGPFLLVVPLS 540
Query: 825 VLLNWEMEFKRFAPGFKVLTYYGSPQQRREKR-KGW----NKPDAFHVCITSYQLVVHDQ 879
L +W+ E + +A + Y G R R W K F++ +T+Y++++ D+
Sbjct: 541 TLTSWQREIQTWASQMNAVVYLGDINSRNMIRTHEWTHHQTKRLKFNILLTTYEILLKDK 600
Query: 880 HSFKRKKWQYMILDEAHNIKNFRSTRWQALLNFNTERRLLLTGTPLQNNLAELWSLLYFL 939
W ++ +DEAH +KN S ++ L++F + RLL+TGTPLQN+L ELWSLL+F+
Sbjct: 601 AFLGGLNWAFIGVDEAHRLKNDDSLLYKTLIDFKSNHRLLITGTPLQNSLKELWSLLHFI 660
Query: 940 MPQTALENGKVSGFADLDAFQQWFGRPVDKIVETGENYEQDEETKKTVSKLHQVLRPYLL 999
MP+ F+ + F++ G+ G Y + LH+ L P+LL
Sbjct: 661 MPEK---------FSSWEDFEEEHGK--------GREY--------GYASLHKELEPFLL 695
Query: 1000 RRLKADVEKQMPGKYEHIIYCRLSKRQRFLYDDFMSRAQTKETLAS-GNFMSIINCLMQL 1058
RR+K DVEK +P K E I+ +S Q+ Y ++R + S G+ +N +M+L
Sbjct: 696 RRVKKDVEKSLPAKVEQILRMEMSALQKQYYKWILTRNYKALSKGSKGSTSGFLNIMMEL 755
Query: 1059 RKVCNH 1064
+K CNH
Sbjct: 756 KKCCNH 761
Score = 135 bits (341), Expect = 4e-31
Identities = 68/142 (47%), Positives = 99/142 (68%), Gaps = 1/142 (0%)
Query: 1324 DNGHRALIFTQMTKVLDILEQFLNFHGYLYMRLDGATKIEDRQILTERFNSD-PRITVFI 1382
+ G+R LIF+QM ++LDIL ++L + + + RLDG+ K E R+ + FN++ F+
Sbjct: 802 ERGNRVLIFSQMVRMLDILAEYLKYRQFPFQRLDGSIKGELRKQALDHFNAEGSEDFCFL 861
Query: 1383 LSSRSGGLGINLTGADTVIFYDSDWNPAMDKQCQDRCHRIGQTRDVHIYRFVSDHTIESN 1442
LS+R+GGLGINL ADTV+ +DSDWNP D Q Q R HRIGQ + V+IYR V+ ++E +
Sbjct: 862 LSTRAGGLGINLASADTVVIFDSDWNPQNDLQAQARAHRIGQKKQVNIYRLVTKGSVEED 921
Query: 1443 ILKKANQKRHLDNVVIQTGDFT 1464
IL++A +K LD++VIQ D T
Sbjct: 922 ILERAKKKMVLDHLVIQRMDTT 943
>CE17716 [R] KOG0383 Predicted helicase
Length = 1829
Score = 194 bits (494), Expect = 7e-49
Identities = 135/366 (36%), Positives = 189/366 (50%), Gaps = 52/366 (14%)
Query: 723 PPKSDNELKDEKAETTESVTSPAAADPLAVSDVPVPSLLRGTLRIYQKQGLNWLASLYNN 782
PPK D E K +K E + + P V++ G L YQ +GLNWL ++N
Sbjct: 568 PPKED-EKKKKKREKID-IRKKYEVQPDYVTETG------GKLHPYQLEGLNWLRHCWSN 619
Query: 783 KTNGILADEMGLGKTIQTISLLAYLACEKENWGPHLIVVPTSVLLNWEMEFKRFAPGFKV 842
T+ ILADEMGLGKT+Q+++ L L E GP LI P S ++NWE E +++ P F V
Sbjct: 620 GTDAILADEMGLGKTVQSLTFLYSLMKEGHCKGPFLIAAPLSTIINWEREAEQWCPDFYV 679
Query: 843 LTYYGSPQQR---REKRKGW------NKPDA----------FHVCITSYQLVVHDQHSFK 883
+TY G R RE + + P A FHV +TSY+ + D+
Sbjct: 680 VTYVGLRDARVVLREHEFSFVEGAVRSGPKASKMKTTENMKFHVLLTSYETINMDKTILS 739
Query: 884 RKKWQYMILDEAHNIKNFRSTRWQALLNFNTERRLLLTGTPLQNNLAELWSLLYFLMPQT 943
+W +++DEAH +KN +S ++ L + R+LLTGTPLQNNL EL+ LL FL +
Sbjct: 740 SIEWGALVVDEAHRLKNNQSLFFKNLNEYTIHYRVLLTGTPLQNNLEELFHLLNFLSKER 799
Query: 944 ALENGKVSGFADLDAFQQWFGRPVDKIVETGENYEQDEETKKTVSKLHQVLRPYLLRRLK 1003
F L+AF E E ++D+ + KLH +L P++LRRLK
Sbjct: 800 ---------FNQLEAF----------TAEFNEISKEDQ-----IEKLHNLLGPHMLRRLK 835
Query: 1004 ADVEKQMPGKYEHIIYCRLSKRQRFLYDDFMSR-AQTKETLASGNFMSIINCLMQLRKVC 1062
ADV MP K E I+ LS Q+ Y + ++R G MS++N LM+L+K C
Sbjct: 836 ADVLTGMPSKSELIVRVELSAMQKKWYKNILTRNFDALNVKNGGTQMSLMNVLMELKKCC 895
Query: 1063 NHPDLF 1068
NHP LF
Sbjct: 896 NHPYLF 901
Score = 134 bits (338), Expect = 9e-31
Identities = 67/139 (48%), Positives = 93/139 (66%), Gaps = 1/139 (0%)
Query: 1324 DNGHRALIFTQMTKVLDILEQFLNFHGYLYMRLDGATKIEDRQILTERFNSD-PRITVFI 1382
D GHR LIF+QMT++LDI+E + GY Y R+DG+ + RQ +R+N+ + +F+
Sbjct: 940 DGGHRVLIFSQMTRMLDIMEDLCEYEGYRYERIDGSIMGQMRQDAIDRYNAPGAQQFIFL 999
Query: 1383 LSSRSGGLGINLTGADTVIFYDSDWNPAMDKQCQDRCHRIGQTRDVHIYRFVSDHTIESN 1442
LS+R+GGLGINL ADTVI YDSDWNP D Q R HR+GQ V IYRFV+ ++E
Sbjct: 1000 LSTRAGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRLGQKHKVMIYRFVTKKSVEEK 1059
Query: 1443 ILKKANQKRHLDNVVIQTG 1461
I A +K L+++V++ G
Sbjct: 1060 ITSVAKKKMLLNHLVVRAG 1078
>7295870 [K] KOG0384 Chromodomain-helicase DNA-binding protein
Length = 1883
Score = 194 bits (492), Expect = 1e-48
Identities = 118/317 (37%), Positives = 172/317 (54%), Gaps = 37/317 (11%)
Query: 764 TLRIYQKQGLNWLASLYNNKTNGILADEMGLGKTIQTISLLAYLACEKENWGPHLIVVPT 823
TLR YQ GLNWL + + + ILADEMGLGKTIQTI L L +GP L VVP
Sbjct: 527 TLRDYQMDGLNWLLHSWCKENSVILADEMGLGKTIQTICFLYSLFKIHHLYGPFLCVVPL 586
Query: 824 SVLLNWEMEFKRFAPGFKVLTYYGSPQQRRE-KRKGW----NKPDAFHVCITSYQLVVHD 878
S + W+ EF +AP V+TY G + R ++ W +K F+ +T+Y++V+ D
Sbjct: 587 STMTAWQREFDLWAPDMNVVTYLGDIKSRELIQQYEWQFESSKRLKFNCILTTYEIVLKD 646
Query: 879 QHSFKRKKWQYMILDEAHNIKNFRSTRWQALLNFNTERRLLLTGTPLQNNLAELWSLLYF 938
+ +W +++DEAH +KN S +++L F+T RLL+TGTPLQN+L ELW+LL+F
Sbjct: 647 KQFLGTLQWAALLVDEAHRLKNDDSLLYKSLKEFDTNHRLLITGTPLQNSLKELWALLHF 706
Query: 939 LMPQTALENGKVSGFADLDAFQQWFGRPVDKIVETGENYE--QDEETKKTVSKLHQVLRP 996
+MP D F W EN+E K ++LHQ L P
Sbjct: 707 IMP---------------DKFDTW------------ENFEVQHGNAEDKGYTRLHQQLEP 739
Query: 997 YLLRRLKADVEKQMPGKYEHIIYCRLSKRQRFLYDDFMSR-AQTKETLASGNFMSIINCL 1055
Y+LRR+K DVEK +P K E I+ ++ Q+ Y +++ G+ + +N +
Sbjct: 740 YILRRVKKDVEKSLPAKVEQILRVEMTSLQKQYYKWILTKNFDALRKGKRGSTSTFLNIV 799
Query: 1056 MQLRKVCNHPDLFEVRP 1072
++L+K CNH L +RP
Sbjct: 800 IELKKCCNHAAL--IRP 814
Score = 135 bits (339), Expect = 7e-31
Identities = 69/142 (48%), Positives = 96/142 (67%), Gaps = 1/142 (0%)
Query: 1324 DNGHRALIFTQMTKVLDILEQFLNFHGYLYMRLDGATKIEDRQILTERFNSD-PRITVFI 1382
+ GHR LIF+QM ++LD+L +L + + RLDG+ K E R+ + FN++ + F+
Sbjct: 850 ETGHRVLIFSQMVRMLDVLADYLQKRHFPFQRLDGSIKGEMRRQALDHFNAEGSQDFCFL 909
Query: 1383 LSSRSGGLGINLTGADTVIFYDSDWNPAMDKQCQDRCHRIGQTRDVHIYRFVSDHTIESN 1442
LS+R+GGLGINL ADTVI +DSDWNP D Q Q R HRIGQ V+IYR V+ ++E
Sbjct: 910 LSTRAGGLGINLATADTVIIFDSDWNPQNDLQAQARAHRIGQKNQVNIYRLVTARSVEEQ 969
Query: 1443 ILKKANQKRHLDNVVIQTGDFT 1464
I+++A QK LD++VIQ D T
Sbjct: 970 IVERAKQKMVLDHLVIQRMDTT 991
>YPL082c [K] KOG0392 SNF2 family DNA-dependent ATPase domain-containing
protein
Length = 1867
Score = 193 bits (491), Expect = 2e-48
Identities = 122/341 (35%), Positives = 175/341 (50%), Gaps = 37/341 (10%)
Query: 748 DPLAVSDVPVPSLLRGTLRIYQKQGLNWLASLYNNKTNGILADEMGLGKTIQTISLLA-- 805
DP +P ++ TLR YQ+ G+NWLA L +GIL D+MGLGKT+QTI ++A
Sbjct: 1255 DPSKAKPFKLPIAIKATLRKYQQDGVNWLAFLNKYHLHGILCDDMGLGKTLQTICIIASD 1314
Query: 806 -YLACEKENWG----------PHLIVVPTSVLLNWEMEFKRFAPGFKVLTYYGSPQQRRE 854
YL KE++ P LI+ P S+ +WE EF ++AP KV+ Y G P R
Sbjct: 1315 QYL--RKEDYEKTRSVESRALPSLIICPPSLTGHWENEFDQYAPFLKVVVYAGGPTVRLT 1372
Query: 855 KRKGWNKPDAFHVCITSYQLVVHDQHSFKRKKWQYMILDEAHNIKNFRSTRWQALLNFNT 914
R + D + +TSY + +D + ++ Y +LDE H IKN +S +A+
Sbjct: 1373 LRPQLSDAD---IIVTSYDVARNDLAVLNKTEYNYCVLDEGHIIKNSQSKLAKAVKEITA 1429
Query: 915 ERRLLLTGTPLQNNLAELWSLLYFLMPQTALENGKVSGFADLD-AFQQWFGRPVDKIVET 973
RL+LTGTP+QNN+ ELWSL FLMP GF + FQ+ F +P+ +
Sbjct: 1430 NHRLILTGTPIQNNVLELWSLFDFLMP----------GFLGTEKMFQERFAKPIAASRNS 1479
Query: 974 GENYEQDEETKKTVSKLHQVLRPYLLRRLKADVEKQMPGKYEHIIYCRLSKRQRFLYDDF 1033
+ ++ E + LH+ + P++LRRLK DV +P K YC L Q+ LY DF
Sbjct: 1480 KTSSKEQEAGVLALEALHKQVLPFMLRRLKEDVLSDLPPKIIQDYYCELGDLQKQLYMDF 1539
Query: 1034 MSRAQT-------KETLASGNFMSIINCLMQLRKVCNHPDL 1067
+ + +A G I L +RK+CNHP L
Sbjct: 1540 TKKQKNVVEKDIENSEIADGK-QHIFQALQYMRKLCNHPAL 1579
Score = 123 bits (309), Expect = 2e-27
Identities = 63/136 (46%), Positives = 88/136 (64%), Gaps = 5/136 (3%)
Query: 1327 HRALIFTQMTKVLDILEQFLNFHGYL----YMRLDGATKIEDRQILTERFNSDPRITVFI 1382
HRALIF Q+ +LD++E L F Y+ YMRLDG+ DRQ + +FN DP I +
Sbjct: 1647 HRALIFCQLKDMLDMVENDL-FKKYMPSVTYMRLDGSIDPRDRQKVVRKFNEDPSIDCLL 1705
Query: 1383 LSSRSGGLGINLTGADTVIFYDSDWNPAMDKQCQDRCHRIGQTRDVHIYRFVSDHTIESN 1442
L+++ GGLG+NLTGADTVIF + DWNP D Q DR HRIGQ + V++YR ++ T+E
Sbjct: 1706 LTTKVGGLGLNLTGADTVIFVEHDWNPMNDLQAMDRAHRIGQKKVVNVYRIITKGTLEEK 1765
Query: 1443 ILKKANQKRHLDNVVI 1458
I+ K ++ + V+
Sbjct: 1766 IMGLQKFKMNIASTVV 1781
>SPBC1826.01c [K] KOG0392 SNF2 family DNA-dependent ATPase domain-containing
protein
Length = 635
Score = 192 bits (488), Expect = 4e-48
Identities = 122/372 (32%), Positives = 189/372 (50%), Gaps = 43/372 (11%)
Query: 721 PSPPKSDNELKDEKAETTESVTSPAAADPLAVSDVPVPSLLRGTLRIYQKQGLNWLASLY 780
P P+ + ++++ + E + +P+ + ++ PVP + LR YQ++G+NWLA L
Sbjct: 1 PDLPQYLLDSREKERKFLEQMLNPSKVEAFSI---PVP--ISADLRKYQQEGVNWLAFLN 55
Query: 781 NNKTNGILADEMGLGKTIQTISLLAYLACEKENWG-----------PHLIVVPTSVLLNW 829
+ +GIL D+MGLGKT+QTI ++A ++ P LIV P+++ +W
Sbjct: 56 KYELHGILCDDMGLGKTLQTICIVASDHYNRQKLFEESGSPKFAHVPSLIVCPSTLAGHW 115
Query: 830 EMEFKRFAPGFKVLTYYGSPQQRREKRKGWNKPDAFHVCITSYQLVVHDQHSFKRKKWQY 889
+ E +AP KV Y G P +R + R K D V +TSY + +D + W Y
Sbjct: 116 QQELSTYAPFLKVSAYVGPPAERAKIRSKMKKSD---VVVTSYDICRNDVDELVKIDWNY 172
Query: 890 MILDEAHNIKNFRSTRWQALLNFNTERRLLLTGTPLQNNLAELWSLLYFLMPQTALENGK 949
+LDE H IKN R+ +A+ + + RL+L+GTP+QNN+ ELWSL FLMP
Sbjct: 173 CVLDEGHVIKNARAKLTKAVKSLRSYHRLILSGTPIQNNVLELWSLFDFLMP-------- 224
Query: 950 VSGFADLD-AFQQWFGRPVDKIVETGENYEQDEETKKTVSKLHQVLRPYLLRRLKADVEK 1008
GF + FQ+ F RP+ + + ++ E + +H+ + P++LRRLK DV
Sbjct: 225 --GFLGTEKTFQERFVRPIAASRDAKSSSKERERGTLALEAIHKQVLPFMLRRLKEDVLA 282
Query: 1009 QMPGKYEHIIYCRLSKRQRFLYDDFMSRAQTKETL-------------ASGNFMSIINCL 1055
+P K YC +S QR L +DF+S+ E L I L
Sbjct: 283 DLPPKIIQDYYCDMSDLQRKLLNDFVSQLNINEELEDDETEKTQGTRKKKSQKAHIFQAL 342
Query: 1056 MQLRKVCNHPDL 1067
+RK+CNHP L
Sbjct: 343 QYMRKLCNHPAL 354
Score = 117 bits (293), Expect = 1e-25
Identities = 63/160 (39%), Positives = 90/160 (55%), Gaps = 3/160 (1%)
Query: 1327 HRALIFTQMTKVLDILEQFL---NFHGYLYMRLDGATKIEDRQILTERFNSDPRITVFIL 1383
HR LIF Q+ +LD++E+ L YMRLDG+ + RQ +FN+DP I V +L
Sbjct: 419 HRVLIFCQLKDMLDMVEKDLLQATMPDVTYMRLDGSVEPTKRQEAVTKFNNDPSIDVLLL 478
Query: 1384 SSRSGGLGINLTGADTVIFYDSDWNPAMDKQCQDRCHRIGQTRDVHIYRFVSDHTIESNI 1443
++ GGLG+NLTGADTVIF + DWNP D Q DR HRIGQ + V++YR ++ +E I
Sbjct: 479 TTHVGGLGLNLTGADTVIFVEHDWNPMRDLQAMDRAHRIGQKKVVNVYRLITRGCLEEKI 538
Query: 1444 LKKANQKRHLDNVVIQTGDFTTDYFTKLSVKDLLGAEAPE 1483
+ K ++ + V+ + + DL A E
Sbjct: 539 MGLQRFKMNVASTVVNQQNAGLSSIGTDQILDLFNTTADE 578
>CE16277 [B] KOG0389 SNF2 family DNA-dependent ATPase
Length = 1038
Score = 192 bits (488), Expect = 4e-48
Identities = 123/314 (39%), Positives = 173/314 (54%), Gaps = 20/314 (6%)
Query: 757 VPSLLRG-TLRIYQKQGLNWLASLYNNKTNGILADEMGLGKTIQTISLLAYLACEKENWG 815
+P L G TL YQ G+ WL +YN N IL DEMGLGKTIQ ++ L+YL + G
Sbjct: 385 LPLLKEGCTLHDYQLIGVKWLIMMYNKDLNAILGDEMGLGKTIQIVAFLSYLK-QIGKTG 443
Query: 816 PHLIVVPTSVLLNWEMEFKRFAPGFKVLTYYGSPQQRREKRKGWNKP-DAFHVCITSYQL 874
PHLIVVP+S + NW EF ++ P ++LTYYGS +R+ R K D V +T+Y +
Sbjct: 444 PHLIVVPSSTIENWIGEFHKWCPSIQLLTYYGSQDERKHLRHRVKKQKDHIDVILTTYNM 503
Query: 875 VVH---DQHSFKRKKWQYMILDEAHNIKNFRSTRWQALLNFNTERRLLLTGTPLQNNLAE 931
V D+ FK Y+I DE H +KN S R++ L+ ++++LLTGTPLQNNL E
Sbjct: 504 VTSKSDDKKFFKNFSLNYVIYDEGHMLKNCDSERYRGLMKVKGKKKILLTGTPLQNNLIE 563
Query: 932 LWSLLYFLMPQTALENGKVSGFADLDAFQQWFGRPVDKIVETGENYEQDEETKKTVSKLH 991
L SL+YF++ + + N L + G +D + Y+QD + +
Sbjct: 564 LISLMYFVL--SKVFNKYCEDITHLLQHFKQLGPALD--TKNKALYQQDR-----IEEAK 614
Query: 992 QVLRPYLLRRLKADVEKQMPGKYEHIIYCRLSKRQRFLYDDFMSRAQTKETLASGNFMSI 1051
+L+PY+LRRLK V +P K E II + K Q+ LYD+ + Q E SG+
Sbjct: 615 AILQPYILRRLKNQVLGSLPSKSEQIIEVEMKKPQKQLYDNIVEALQQSE--ESGD---S 669
Query: 1052 INCLMQLRKVCNHP 1065
LM+LR+ NHP
Sbjct: 670 YGSLMRLRQAANHP 683
Score = 137 bits (344), Expect = 2e-31
Identities = 67/132 (50%), Positives = 89/132 (66%)
Query: 1326 GHRALIFTQMTKVLDILEQFLNFHGYLYMRLDGATKIEDRQILTERFNSDPRITVFILSS 1385
G + LIF+Q T +LDILE +LN GY Y RLDG T + DRQ + FN + VF+LS+
Sbjct: 769 GDKVLIFSQFTSMLDILEVYLNIRGYSYKRLDGQTPVLDRQEMINEFNLSKDLFVFLLST 828
Query: 1386 RSGGLGINLTGADTVIFYDSDWNPAMDKQCQDRCHRIGQTRDVHIYRFVSDHTIESNILK 1445
R+GGLGINLT A+ +I +D D+NP DKQ +DRCHR+GQ + VH+ R VS T+E +L
Sbjct: 829 RAGGLGINLTSANHIIIHDIDFNPYNDKQAEDRCHRMGQEKPVHVTRLVSKGTVEVGMLA 888
Query: 1446 KANQKRHLDNVV 1457
A +K L+ V
Sbjct: 889 LAKKKLQLEKQV 900
>7297570 [B] KOG0389 SNF2 family DNA-dependent ATPase
Length = 844
Score = 192 bits (488), Expect = 4e-48
Identities = 118/319 (36%), Positives = 177/319 (54%), Gaps = 19/319 (5%)
Query: 755 VPVPSLLRGTLRI--YQKQGLNWLASLYNNKTNGILADEMGLGKTIQTISLLAYLACEKE 812
V P LL L++ YQ GLNWL ++ + NGILADEMGLGKTIQ I+ LAYL
Sbjct: 277 VEQPKLLSSGLQLADYQIIGLNWLTVMHKQEMNGILADEMGLGKTIQVIAFLAYLKENGL 336
Query: 813 NWGPHLIVVPTSVLLNWEMEFKRFAPGFKVLTYYGSPQQRREKRKGWNKP--DAFHVCIT 870
+ HLIVVP+S L NWE E R+ P V Y+GS +RR R + K F V +T
Sbjct: 337 SQAAHLIVVPSSTLDNWEAEISRWCPELVVEKYHGSQDERRRMRGRFAKDGFTGFDVLLT 396
Query: 871 SYQLV---VHDQHSFKRKKWQYMILDEAHNIKNFRSTRWQALLNFNTERRLLLTGTPLQN 927
+Y +V ++ F+ K Y+I DEAH +KN + R+ L+ N R+LLTGTPLQN
Sbjct: 397 TYHIVGSTPEERKMFRVCKLDYVIFDEAHMLKNMTTQRYANLITINARMRILLTGTPLQN 456
Query: 928 NLAELWSLLYFLMPQTALENGKVSGFADLDAFQQWFGRPVDKIVETGENYEQDEETKKTV 987
NL EL SLL F+MP+ ++ ++ + F + K G+ E + + +
Sbjct: 457 NLLELISLLCFVMPKFFAKS--------IEDIKSLFAK---KGKSDGDQDEVSQFQETQI 505
Query: 988 SKLHQVLRPYLLRRLKADVEKQMPGKYEHIIYCRLSKRQRFLYDDFMS-RAQTKETLASG 1046
+ ++++P++LRRLK DV K +P K + +S +Q+ Y + + + K + S
Sbjct: 506 QRAKRIMKPFVLRRLKKDVLKNLPKKLSLVEKVPMSSQQKIYYHELVDYYSNNKGEVCSS 565
Query: 1047 NFMSIINCLMQLRKVCNHP 1065
+ + I +M++R++ NHP
Sbjct: 566 SERAGIAIMMEMRRIANHP 584
Score = 139 bits (351), Expect = 3e-32
Identities = 67/129 (51%), Positives = 90/129 (68%)
Query: 1326 GHRALIFTQMTKVLDILEQFLNFHGYLYMRLDGATKIEDRQILTERFNSDPRITVFILSS 1385
GHR L+F+Q T +LDI+E++L + + RLDGAT + RQ L FN D I VF+LS+
Sbjct: 668 GHRVLLFSQFTMMLDIVEEYLRIRKFGFCRLDGATAVNVRQDLITDFNGDDSIFVFLLST 727
Query: 1386 RSGGLGINLTGADTVIFYDSDWNPAMDKQCQDRCHRIGQTRDVHIYRFVSDHTIESNILK 1445
++GG+GINLT ADT + +D D+NP DKQ +DRCHR+GQ R V IYR +S+ TIE IL
Sbjct: 728 KAGGVGINLTAADTCVIHDIDFNPYNDKQAEDRCHRMGQQRPVTIYRLISESTIEEGILM 787
Query: 1446 KANQKRHLD 1454
A +K L+
Sbjct: 788 AAEEKLKLE 796
>Hs4557565 [KL] KOG0387 Transcription-coupled repair protein CSB/RAD26 (contains
SNF2 family DNA-dependent ATPase domain)
Length = 1493
Score = 189 bits (480), Expect = 3e-47
Identities = 120/329 (36%), Positives = 167/329 (50%), Gaps = 24/329 (7%)
Query: 757 VPSLLRGTLRIYQKQGLNWLASLYNNKTNGILADEMGLGKTIQTISLLAYLACEK----- 811
VP L L YQ+ G+ WL L+ + GIL DEMGLGKTIQ I+ LA L+ K
Sbjct: 499 VPGFLFKKLFKYQQTGVRWLWELHCQQAGGILGDEMGLGKTIQIIAFLAGLSYSKIRTRG 558
Query: 812 -----ENWGPHLIVVPTSVLLNWEMEFKRFAPGFKVLTYYGSPQQRREKRKGWNKPDAFH 866
E GP +IV PT+V+ W EF + P F+V + + +K K H
Sbjct: 559 SNYRFEGLGPTVIVCPTTVMHQWVKEFHTWWPPFRVAILHETGSYTHKKEKLIRDVAHCH 618
Query: 867 -VCITSYQLVVHDQHSFKRKKWQYMILDEAHNIKNFRSTRWQALLNFNTERRLLLTGTPL 925
+ ITSY + Q R W Y+ILDE H I+N + A F T R++L+G+P+
Sbjct: 619 GILITSYSYIRLMQDDISRYDWHYVILDEGHKIRNPNAAVTLACKQFRTPHRIILSGSPM 678
Query: 926 QNNLAELWSLLYFLMPQTALENGKVSGFADLDAFQQWFGRPVDKIVETGENYEQDEETKK 985
QNNL ELWSL F+ P GK+ L F + F P+ + + Q + K
Sbjct: 679 QNNLRELWSLFDFIFP------GKL---GTLPVFMEQFSVPITMGGYSNASPVQVKTAYK 729
Query: 986 TVSKLHQVLRPYLLRRLKADVEK--QMPGKYEHIIYCRLSKRQRFLYDDFMSRAQTKETL 1043
L + PYLLRR+K+DV+ +P K E +++CRL+ Q +Y +F+ + L
Sbjct: 730 CACVLRDTINPYLLRRMKSDVKMSLSLPDKNEQVLFCRLTDEQHKVYQNFVDSKEVYRIL 789
Query: 1044 ASGNFMSIINCLMQLRKVCNHPDLFEVRP 1072
M I + L+ LRK+CNHPDLF P
Sbjct: 790 --NGEMQIFSGLIALRKICNHPDLFSGGP 816
Score = 129 bits (324), Expect = 4e-29
Identities = 63/134 (47%), Positives = 88/134 (65%)
Query: 1326 GHRALIFTQMTKVLDILEQFLNFHGYLYMRLDGATKIEDRQILTERFNSDPRITVFILSS 1385
G R L+F+Q ++LDILE FL Y Y+++DG T I RQ L R+N D I VF+L++
Sbjct: 855 GQRVLLFSQSRQMLDILEVFLRAQKYTYLKMDGTTTIASRQPLITRYNEDTSIFVFLLTT 914
Query: 1386 RSGGLGINLTGADTVIFYDSDWNPAMDKQCQDRCHRIGQTRDVHIYRFVSDHTIESNILK 1445
R GGLG+NLTGA+ V+ YD DWNP+ D Q ++R RIGQ + V +YR ++ TIE I
Sbjct: 915 RVGGLGVNLTGANRVVIYDPDWNPSTDTQARERAWRIGQKKQVTVYRLLTAGTIEEKIYH 974
Query: 1446 KANQKRHLDNVVIQ 1459
+ K+ L N V++
Sbjct: 975 RQIFKQFLTNRVLK 988
>SPAC25A8.01c [B] KOG0389 SNF2 family DNA-dependent ATPase
Length = 922
Score = 186 bits (471), Expect = 3e-46
Identities = 166/534 (31%), Positives = 251/534 (46%), Gaps = 87/534 (16%)
Query: 765 LRIYQKQGLNWLASLYNNKTNGILADEMGLGKTIQTISLLAYLACEKENWGPHLIVVPTS 824
L+ YQ G+NWL LY K GILADEMGLGKT QTI+ + L + N GPHL++ P S
Sbjct: 387 LQDYQIIGINWLYLLYELKLAGILADEMGLGKTCQTIAFFSLLMDKNIN-GPHLVIAPAS 445
Query: 825 VLLNWEMEFKRFAPGFKVLTYYGSPQQRREKRKGWNK-PDAFHVCITSYQLVVH---DQH 880
+ NW EF +F P K+ YYGS +R E R+ N D+++V +T+Y+L D+
Sbjct: 446 TMENWLREFAKFCPKLKIELYYGSQVEREEIRERINSNKDSYNVMLTTYRLAATSKADRL 505
Query: 881 SFKRKKWQYMILDEAHNIKNFRSTRWQALLNFNTERRLLLTGTPLQNNLAELWSLLYFLM 940
+ +K+ + DE H +KN S R++ L++ + R+LLTGTPLQNNL EL SLL F++
Sbjct: 506 FLRNQKFNVCVYDEGHYLKNRASERYRHLMSIPADFRVLLTGTPLQNNLKELISLLAFIL 565
Query: 941 PQTALENGKVSGFADLDAFQQWFGRPVDKIVETGENYEQDEETKKTVSKLHQVLRPYLLR 1000
P G LD P ++E+ +++ VS+ ++ P++LR
Sbjct: 566 PHVF-----DYGLKSLDVIFTMKKSP-------ESDFERALLSEQRVSRAKMMMAPFVLR 613
Query: 1001 RLKADVEKQMPGKYEHIIYCRLSKRQRFLYDDFMSRAQTKETLASGNFMSIIN------- 1053
R K+ V +P K I +C S+ +R YDDF S+ L + ++
Sbjct: 614 RKKSQVLDALPKKTRIIEFCEFSEEERRRYDDFASKQSVNSLLDENVMKTNLDTNANLAK 673
Query: 1054 -------CLMQLRKVCNHPDLFEVR---PILTSFCIEDSVSKSYCDLNN-YVYNRLHENQ 1102
L+QLRK+ +HP LF + IL Y N Y++ + Q
Sbjct: 674 KKSTAGFVLVQLRKLADHPMLFRIHYKDDILRQMAKAIMNEPQYKKANELYIF---EDMQ 730
Query: 1103 FETSVDLSNLNFQFTSND------------------KTLSTN----------HSEKISEL 1134
+ + ++L NL +F S + K L TN S+ L
Sbjct: 731 YMSDIELHNLCCKFPSINSFQLKDEPWMDATKVRKLKKLLTNAVENGDRVVLFSQFTQVL 790
Query: 1135 QCVQPILKEISRLKQLNENDSPVTQPDF-QDL-NQYYSYAKHNKINEIIGQLEHLNYMNN 1192
+Q ++K ++ LK L + S TQ DF QDL +Q+Y+ IN + + + N
Sbjct: 791 DILQLVMKSLN-LKFLRFDGS--TQVDFRQDLIDQFYA---DESINVFLLSTKAGGFGIN 844
Query: 1193 LRCNRRPMYGSNIVKLLTVGPKKFIDCELTQESIKPLETRLLEGKE-TIEKFAV 1245
L C +N+V L V F D + + R+ + KE T+ KF V
Sbjct: 845 LAC-------ANMVILYDVSFNPFDDLQAEDRA-----HRVGQKKEVTVYKFVV 886
Score = 121 bits (304), Expect = 8e-27
Identities = 59/131 (45%), Positives = 89/131 (67%)
Query: 1324 DNGHRALIFTQMTKVLDILEQFLNFHGYLYMRLDGATKIEDRQILTERFNSDPRITVFIL 1383
+NG R ++F+Q T+VLDIL+ + ++R DG+T+++ RQ L ++F +D I VF+L
Sbjct: 775 ENGDRVVLFSQFTQVLDILQLVMKSLNLKFLRFDGSTQVDFRQDLIDQFYADESINVFLL 834
Query: 1384 SSRSGGLGINLTGADTVIFYDSDWNPAMDKQCQDRCHRIGQTRDVHIYRFVSDHTIESNI 1443
S+++GG GINL A+ VI YD +NP D Q +DR HR+GQ ++V +Y+FV TIE +I
Sbjct: 835 STKAGGFGINLACANMVILYDVSFNPFDDLQAEDRAHRVGQKKEVTVYKFVVKDTIEEHI 894
Query: 1444 LKKANQKRHLD 1454
+ AN K LD
Sbjct: 895 QRLANAKIALD 905
>SPAC20G8.08c [B] KOG0389 SNF2 family DNA-dependent ATPase
Length = 944
Score = 186 bits (471), Expect = 3e-46
Identities = 125/309 (40%), Positives = 171/309 (54%), Gaps = 26/309 (8%)
Query: 764 TLRIYQKQGLNWLASLYNNKTNGILADEMGLGKTIQTISLLAYLACEKENWGPHLIVVPT 823
TL+ YQ GLNWL +Y K +GILADEMGLGKT Q IS LA L EK HL+VVP+
Sbjct: 413 TLKSYQIVGLNWLCLMYKAKLSGILADEMGLGKTCQVISFLASLK-EKGIQNRHLVVVPS 471
Query: 824 SVLLNWEMEFKRFAPGFKVLTYYGSPQQRREKRKGWNKPDAFHVCITSYQLVV--HDQHS 881
S L NW EF++F P +V +Y G+ +R KR D F V +T+YQL D S
Sbjct: 472 STLGNWLREFEKFCPSLRVESYSGTQSERINKRYYLMDTD-FDVLVTTYQLASGSRDDRS 530
Query: 882 FKRK-KWQYMILDEAHNIKNFRSTRWQALLNFNTERRLLLTGTPLQNNLAELWSLLYFLM 940
F RK ++ I DE H +KN S R++ L+N RLL+TGTPLQNNL EL SLL F++
Sbjct: 531 FLRKQRFDISIFDEGHYLKNRMSERYKHLMNIPANFRLLITGTPLQNNLKELISLLAFML 590
Query: 941 PQTALENGKVSGFADLDAFQQWFGRPVDKIVETGE-NYEQDEETKKTVSKLHQVLRPYLL 999
P+ N LD + KI T + + E+ +++ +S+ ++ P++L
Sbjct: 591 PKVFDNN-----MQGLDI--------IYKIKTTSDGDIERAYLSQERISRAKTIMNPFIL 637
Query: 1000 RRLKADVEKQMPGKYEHIIYCRLSKRQRFLYDDFMSRAQTKETLASGNFMSIINCLMQLR 1059
RR K +V +P K +H+ YC + + Q LY +S + K + + N LMQLR
Sbjct: 638 RRRKENVLSDLPPKIQHVEYCHMEETQLSLY---LSVLELKNLVNANR----ENILMQLR 690
Query: 1060 KVCNHPDLF 1068
K H LF
Sbjct: 691 KAALHQLLF 699
Score = 130 bits (328), Expect = 1e-29
Identities = 65/128 (50%), Positives = 90/128 (69%)
Query: 1328 RALIFTQMTKVLDILEQFLNFHGYLYMRLDGATKIEDRQILTERFNSDPRITVFILSSRS 1387
R LIF+Q T+VLDILE LN ++RLDG+T +E RQ L + F+++ VF+LS++S
Sbjct: 782 RILIFSQFTQVLDILEYVLNTLDLEFLRLDGSTPVETRQQLIDDFHTNENYKVFLLSTKS 841
Query: 1388 GGLGINLTGADTVIFYDSDWNPAMDKQCQDRCHRIGQTRDVHIYRFVSDHTIESNILKKA 1447
GG GINLT A+ VI +D +NP D Q +DR HR+GQTR VH+YR ++ +TIE NI + A
Sbjct: 842 GGFGINLTCANIVILFDCSFNPFDDMQAEDRAHRVGQTRPVHVYRLITKNTIEENIRRLA 901
Query: 1448 NQKRHLDN 1455
N K L++
Sbjct: 902 NTKLTLES 909
>Hs22047300 [K] KOG0384 Chromodomain-helicase DNA-binding protein
Length = 1970
Score = 181 bits (458), Expect = 1e-44
Identities = 119/319 (37%), Positives = 168/319 (52%), Gaps = 45/319 (14%)
Query: 765 LRIYQKQGLNWLASLYNNKTNGILADEMGLGKTIQTISLLAYLACEKENWGPHLIVVPTS 824
LR YQ +G+NWL + N N ILADEMGLGKTIQ+I+ L Y K GP L++ P S
Sbjct: 399 LREYQLEGVNWLLFNWYNMRNCILADEMGLGKTIQSITFL-YEIYLKGIHGPFLVIAPLS 457
Query: 825 VLLNWEMEFKRFAPGFKVLTYYGSPQQRREKR--------------KGWNKPDAFHVCIT 870
+ NWE EF+ + V+ Y+GS RR + KG K FH IT
Sbjct: 458 TIPNWEREFRTWTE-LNVVVYHGSQASRRTIQLYEMYFKDPQGRVIKGSYK---FHAIIT 513
Query: 871 SYQLVVHDQHSFKRKKWQYMILDEAHNIKNFRSTRWQALLNFNTERRLLLTGTPLQNNLA 930
++++++ D + W+ +++DEAH +KN + L + E ++LLTGTPLQN +
Sbjct: 514 TFEMILTDCPELRNIPWRCVVIDEAHRLKNRNCKLLEGLKMMDLEHKVLLTGTPLQNTVE 573
Query: 931 ELWSLLYFLMPQTALENGKVSGFADLDAFQQWFGRPVDKIVETGENYEQDEETKKTVSKL 990
EL+SLL+FL P S F F Q FG D +T++ V KL
Sbjct: 574 ELFSLLHFLEP---------SRFPSETTFMQEFG---------------DLKTEEQVQKL 609
Query: 991 HQVLRPYLLRRLKADVEKQMPGKYEHIIYCRLSKRQRFLYDDFMSRAQTKETLASG--NF 1048
+L+P +LRRLK DVEK + K E II L+ Q+ Y + + T + G N
Sbjct: 610 QAILKPMMLRRLKEDVEKNLAPKEETIIEVELTNIQKKYYRAILEKNFTFLSKGGGQANV 669
Query: 1049 MSIINCLMQLRKVCNHPDL 1067
+++N +M+LRK CNHP L
Sbjct: 670 PNLLNTMMELRKCCNHPYL 688
Score = 131 bits (330), Expect = 7e-30
Identities = 68/136 (50%), Positives = 89/136 (65%), Gaps = 1/136 (0%)
Query: 1326 GHRALIFTQMTKVLDILEQFLNFHGYLYMRLDGATKIEDRQILTERFNS-DPRITVFILS 1384
GHR LIF+QM + LDILE +L Y Y R+DG + RQ +RF+ D VF+L
Sbjct: 737 GHRVLIFSQMVRCLDILEDYLIQRRYPYERIDGRVRGNLRQAAIDRFSKPDSDRFVFLLC 796
Query: 1385 SRSGGLGINLTGADTVIFYDSDWNPAMDKQCQDRCHRIGQTRDVHIYRFVSDHTIESNIL 1444
+R+GGLGINLT ADT I +DSDWNP D Q Q RCHRIGQ++ V IYR ++ ++ E +
Sbjct: 797 TRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQSKSVKIYRLITRNSYEREMF 856
Query: 1445 KKANQKRHLDNVVIQT 1460
KA+ K LD V+Q+
Sbjct: 857 DKASLKLGLDKAVLQS 872
>Hs21362042 [K] KOG0384 Chromodomain-helicase DNA-binding protein
Length = 2713
Score = 179 bits (454), Expect = 3e-44
Identities = 118/316 (37%), Positives = 169/316 (53%), Gaps = 39/316 (12%)
Query: 765 LRIYQKQGLNWLASLYNNKTNGILADEMGLGKTIQTISLLAYLACEKENWGPHLIVVPTS 824
LR YQ +G+NWL + N+ N ILADEMGLGKTIQ+I+ L+ + + GP LI+ P S
Sbjct: 459 LREYQLEGMNWLLFNWYNRKNCILADEMGLGKTIQSITFLSEIFLRGIH-GPFLIIAPLS 517
Query: 825 VLLNWEMEFKRFAPGFKVLTYYGSPQQRRE-------KRKGWNKPDA----FHVCITSYQ 873
+ NWE EF+ + + Y+GS R+ R P + FHV IT+++
Sbjct: 518 TITNWEREFRTWTE-MNAIVYHGSQISRQMIQQYEMVYRDAQGNPLSGVFKFHVVITTFE 576
Query: 874 LVVHDQHSFKRKKWQYMILDEAHNIKNFRSTRWQALLNFNTERRLLLTGTPLQNNLAELW 933
+++ D K+ W +I+DEAH +KN + L E ++LLTGTPLQN++ EL+
Sbjct: 577 MILADCPELKKIHWSCVIIDEAHRLKNRNCKLLEGLKLMALEHKVLLTGTPLQNSVEELF 636
Query: 934 SLLYFLMPQTALENGKVSGFADLDAFQQWFGRPVDKIVETGENYEQDEETKKTVSKLHQV 993
SLL FL P S F AF + FG D +T++ V KL +
Sbjct: 637 SLLNFLEP---------SQFPSETAFLEEFG---------------DLKTEEQVKKLQSI 672
Query: 994 LRPYLLRRLKADVEKQMPGKYEHIIYCRLSKRQRFLYDDFMSRAQTKETLASG--NFMSI 1051
L+P +LRRLK DVEK + K E II L+ Q+ Y + + + T + N ++
Sbjct: 673 LKPMMLRRLKDDVEKNLAPKQETIIEVELTNIQKKYYRAILEKNFSFLTKGANQHNMPNL 732
Query: 1052 INCLMQLRKVCNHPDL 1067
IN +M+LRK CNHP L
Sbjct: 733 INTMMELRKCCNHPYL 748
Score = 132 bits (333), Expect = 3e-30
Identities = 74/170 (43%), Positives = 101/170 (58%), Gaps = 6/170 (3%)
Query: 1326 GHRALIFTQMTKVLDILEQFLNFHGYLYMRLDGATKIEDRQILTERF-NSDPRITVFILS 1384
GH+ LIF+QM + LDILE +L Y Y R+DG + RQ +RF D VF+L
Sbjct: 797 GHKVLIFSQMVRCLDILEDYLIQRRYTYERIDGRVRGNLRQAAIDRFCKPDSDRFVFLLC 856
Query: 1385 SRSGGLGINLTGADTVIFYDSDWNPAMDKQCQDRCHRIGQTRDVHIYRFVSDHTIESNIL 1444
+R+GGLGINLT ADT I +DSDWNP D Q Q RCHRIGQ++ V +YR ++ ++ E +
Sbjct: 857 TRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQSKAVKVYRLITRNSYEREMF 916
Query: 1445 KKANQKRHLDNVVIQT-----GDFTTDYFTKLSVKDLLGAEAPEDIPDDK 1489
KA+ K LD V+Q G +K+ V+DLL A + D++
Sbjct: 917 DKASLKLGLDKAVLQDINRKGGTNGVQQLSKMEVEDLLRKGAYGALMDEE 966
>7293795 [R] KOG0383 Predicted helicase
Length = 883
Score = 177 bits (448), Expect = 2e-43
Identities = 118/319 (36%), Positives = 160/319 (49%), Gaps = 39/319 (12%)
Query: 765 LRIYQKQGLNWLASLYNNKTNGILADEMGLGKTIQTISLLAYLACEKENWGPHLIVVPTS 824
L +Q +G++WL + ILADEMGLGKTIQT+ L L E GP LI VP S
Sbjct: 267 LHPFQIEGVSWLRYSWGQGIPTILADEMGLGKTIQTVVFLYSLFKEGHCRGPFLISVPLS 326
Query: 825 VLLNWEMEFKRFAPGFKVLTYYGSPQQRREKRKGW--------------NKPDAFHVCIT 870
L NWE E + +AP +TY G R RK F+V +T
Sbjct: 327 TLTNWERELELWAPELYCVTYVGGKTARAVIRKHEISFEEVTTKTMRENQTQYKFNVMLT 386
Query: 871 SYQLVVHDQHSFKRKKWQYMILDEAHNIKNFRSTRWQALLNFNTERRLLLTGTPLQNNLA 930
SY+ + D W +++DEAH +++ +S ++ L + +LLLTGTPLQNNL
Sbjct: 387 SYEFISVDAAFLGCIDWAALVVDEAHRLRSNQSKFFRILSKYRIGYKLLLTGTPLQNNLE 446
Query: 931 ELWSLLYFLMPQTALENGKVSGFADLDAFQQWFGRPVDKIVETGENYEQDEETKKTVSKL 990
EL+ LL F L +GK F DL FQ F D ++ V +L
Sbjct: 447 ELFHLLNF------LSSGK---FNDLQTFQAEF---------------TDVSKEEQVKRL 482
Query: 991 HQVLRPYLLRRLKADVEKQMPGKYEHIIYCRLSKRQRFLYDDFMSR-AQTKETLASGNFM 1049
H++L P++LRRLKADV K MP K E I+ LS Q+ Y +++ + G
Sbjct: 483 HEILEPHMLRRLKADVLKSMPPKSEFIVRVELSSMQKKFYKHILTKNFKALNQKGGGRVC 542
Query: 1050 SIINCLMQLRKVCNHPDLF 1068
S++N +M LRK CNHP LF
Sbjct: 543 SLLNIMMDLRKCCNHPYLF 561
Score = 137 bits (345), Expect = 1e-31
Identities = 75/156 (48%), Positives = 105/156 (67%), Gaps = 4/156 (2%)
Query: 1325 NGHRALIFTQMTKVLDILEQFLNFHGYLYMRLDGATKIEDRQILTERFNSDP--RITVFI 1382
+ HR L+F+QMTK+L++LE FL GY Y R+DG+ K + RQ +RFN DP VF+
Sbjct: 601 DNHRVLLFSQMTKMLNVLEHFLEGEGYQYDRIDGSIKGDLRQKAIDRFN-DPVSEHFVFL 659
Query: 1383 LSSRSGGLGINLTGADTVIFYDSDWNPAMDKQCQDRCHRIGQTRDVHIYRFVSDHTIESN 1442
LS+R+GGLGINL ADTVI +DSDWNP D Q R HR+GQ + V IYRFV+ +++E
Sbjct: 660 LSTRAGGLGINLATADTVIIFDSDWNPHNDVQAFSRAHRMGQKKKVMIYRFVTHNSVEER 719
Query: 1443 ILKKANQKRHLDNVVIQTG-DFTTDYFTKLSVKDLL 1477
I++ A K L ++V++ G T F+K ++D+L
Sbjct: 720 IMQVAKHKMMLTHLVVRPGMGGMTTNFSKDELEDIL 755
>Hs22047966 [K] KOG0384 Chromodomain-helicase DNA-binding protein
Length = 1953
Score = 176 bits (445), Expect = 3e-43
Identities = 118/331 (35%), Positives = 175/331 (52%), Gaps = 41/331 (12%)
Query: 762 RGTLRIYQKQGLNWLASLYNNKTNGILADEMGLGKTIQTISLLAYLACEKENWGPHLIVV 821
R LR YQ +G+NWL + N+ N ILADEMGLGKTIQ+I+ L + + GP L++
Sbjct: 180 RNQLREYQLEGVNWLLFNWYNRQNCILADEMGLGKTIQSIAFLQEVYNVGIH-GPFLVIA 238
Query: 822 PTSVLLNWEMEFKRFAPGFKVLTYYGSPQQRR---------EKRKGWNKPDA--FHVCIT 870
P S + NWE EF + + Y+GS R+ + +G P A F IT
Sbjct: 239 PLSTITNWEREFNTWTE-MNTIVYHGSLASRQMIQQYEMYCKDSRGRLIPGAYKFDALIT 297
Query: 871 SYQLVVHDQHSFKRKKWQYMILDEAHNIKNFRSTRWQALLNFNTERRLLLTGTPLQNNLA 930
++++++ D + +W+ +I+DEAH +KN +L + + E ++LLTGTPLQN +
Sbjct: 298 TFEMILSDCPELREIEWRCVIIDEAHRLKNRNCKLLDSLKHMDLEHKVLLTGTPLQNTVE 357
Query: 931 ELWSLLYFLMPQTALENGKVSGFADLDAFQQWFGRPVDKIVETGENYEQDEETKKTVSKL 990
EL+SLL+FL P S F F + FG D +T++ V KL
Sbjct: 358 ELFSLLHFLEP---------SQFPSESEFLKDFG---------------DLKTEEQVQKL 393
Query: 991 HQVLRPYLLRRLKADVEKQMPGKYEHIIYCRLSKRQRFLYDDFMSRAQTKETLASG--NF 1048
+L+P +LRRLK DVEK + K E II L+ Q+ Y + + + + +G N
Sbjct: 394 QAILKPMMLRRLKEDVEKNLAPKQETIIEVELTNIQKKYYRAILEKNFSFLSKGAGHTNM 453
Query: 1049 MSIINCLMQLRKVCNHPDLFE--VRPILTSF 1077
+++N +M+LRK CNHP L ILT F
Sbjct: 454 PNLLNTMMELRKCCNHPYLINGAEEKILTEF 484
Score = 136 bits (342), Expect = 3e-31
Identities = 79/173 (45%), Positives = 107/173 (61%), Gaps = 9/173 (5%)
Query: 1326 GHRALIFTQMTKVLDILEQFLNFHGYLYMRLDGATKIEDRQILTERFNS-DPRITVFILS 1384
GH+ LIF+QM + LDILE +L YLY R+DG + RQ +RF+ D VF+L
Sbjct: 521 GHKVLIFSQMVRCLDILEDYLIQRRYLYERIDGRVRGNLRQAAIDRFSKPDSDRFVFLLC 580
Query: 1385 SRSGGLGINLTGADTVIFYDSDWNPAMDKQCQDRCHRIGQTRDVHIYRFVSDHTIESNIL 1444
+R+GGLGINLT ADT I +DSDWNP D Q Q RCHRIGQ++ V +YR ++ ++ E +
Sbjct: 581 TRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQSKAVKVYRLITRNSYEREMF 640
Query: 1445 KKANQKRHLDNVVIQT-----GDFT-TDYFTKLSVKDLL--GAEAPEDIPDDK 1489
KA+ K LD V+Q+ G+ T F+K ++DLL GA A DD+
Sbjct: 641 DKASLKLGLDKAVLQSMSGRDGNITGIQQFSKKEIEDLLRKGAYAAIMEEDDE 693
>CE18196 [K] KOG0384 Chromodomain-helicase DNA-binding protein
Length = 2957
Score = 176 bits (445), Expect = 3e-43
Identities = 122/320 (38%), Positives = 167/320 (52%), Gaps = 44/320 (13%)
Query: 764 TLRIYQKQGLNWLASLYNNKTNGILADEMGLGKTIQTISLLAYLACEKENWGPHLIVVPT 823
+LR YQ +G++WL Y N N ILADEMGLGKT+QTI+ L+ + + GP L+VVP
Sbjct: 1186 SLREYQFEGVDWLLYCYYNAQNCILADEMGLGKTVQTITFLSRI-YDYGIHGPFLVVVPL 1244
Query: 824 SVLLNWEMEFKRFAPGFKVLTYYGSPQQRR---------EKR----KGWNKPDA-FHVCI 869
S + NW EF+ + + Y+GS R +KR K W K I
Sbjct: 1245 STIQNWVREFETWT-DMNAIVYHGSAYAREVLQQYEVFYDKRHCGAKNWKKNFVKIDALI 1303
Query: 870 TSYQLVVHDQHSFKRKKWQYMILDEAHNIKNFRSTRW--QALLNFNTERRLLLTGTPLQN 927
T+++ VV D K+ W+ ++DEAH +KN R+ + LL F E R+LLTGTPLQN
Sbjct: 1304 TTFETVVSDVEFLKKIPWRVCVIDEAHRLKN-RNCKLLVNGLLAFRMEHRVLLTGTPLQN 1362
Query: 928 NLAELWSLLYFLMPQTALENGKVSGFADLDAFQQWFGRPVDKIVETGENYEQDEETKKTV 987
N+ EL+SLL FL PQ F + F + FG +T V
Sbjct: 1363 NIDELFSLLNFLHPQQ---------FDNSATFLEQFG---------------SCQTDDQV 1398
Query: 988 SKLHQVLRPYLLRRLKADVEKQMPGKYEHIIYCRLSKRQRFLYDDFMSRAQTKETLASGN 1047
KL ++L+P +LRRLK DVEK + K E II +LS Q+ Y + R +
Sbjct: 1399 QKLQEILKPMMLRRLKEDVEKSLGPKEETIIEVQLSDMQKKFYRAILER-NFSHLCKGTS 1457
Query: 1048 FMSIINCLMQLRKVCNHPDL 1067
S++N +M+LRK CNHP L
Sbjct: 1458 APSLMNVMMELRKCCNHPFL 1477
Score = 138 bits (347), Expect = 8e-32
Identities = 76/155 (49%), Positives = 100/155 (64%), Gaps = 5/155 (3%)
Query: 1325 NGHRALIFTQMTKVLDILEQFLNFHGYLYMRLDGATKIEDRQILTERF---NSDPRITVF 1381
+GH+ LIF+QM KVLD+LE+FL Y + R+DG + + RQ +RF NSD VF
Sbjct: 1526 DGHKVLIFSQMVKVLDLLEEFLISMSYPFERIDGNVRGDLRQAAIDRFSKENSDR--FVF 1583
Query: 1382 ILSSRSGGLGINLTGADTVIFYDSDWNPAMDKQCQDRCHRIGQTRDVHIYRFVSDHTIES 1441
+L +R+GGLGINLT ADTVI +DSDWNP D Q Q RCHRIGQ + V +YR ++ +T E
Sbjct: 1584 LLCTRAGGLGINLTAADTVIIFDSDWNPQNDLQAQARCHRIGQKKLVKVYRLITSNTYER 1643
Query: 1442 NILKKANQKRHLDNVVIQTGDFTTDYFTKLSVKDL 1476
+ KA+ K LD V+Q+ T LS KD+
Sbjct: 1644 EMFDKASLKLGLDKAVLQSTTALKAEGTALSKKDV 1678
>At2g02090 [B] KOG0389 SNF2 family DNA-dependent ATPase
Length = 763
Score = 174 bits (441), Expect = 1e-42
Identities = 133/424 (31%), Positives = 203/424 (47%), Gaps = 79/424 (18%)
Query: 765 LRIYQKQGLNWLASLYNNKTNG-ILADEMGLGKTIQTISLLAYLACEKENWGPHLIVVPT 823
L+ YQ G+N+L LY G ILADEMGLGKTIQ I+ L L+ + GPHL+V P
Sbjct: 213 LKPYQLVGVNFLLLLYKKGIEGAILADEMGLGKTIQAITYLTLLSRLNNDPGPHLVVCPA 272
Query: 824 SVLLNWEMEFKRFAPGFKVLTYYGSPQQRREKR----KGWNKPDAFHVCITSYQLVVH-- 877
SVL NWE E +++ P F VL Y+G+ + + KP F+V + Y L
Sbjct: 273 SVLENWERELRKWCPSFTVLQYHGAARAAYSRELNSLSKAGKPPPFNVLLVCYSLFERHS 332
Query: 878 -----DQHSFKRKKWQYMILDEAHNIKNFRSTRWQALLNF--NTERRLLLTGTPLQNNLA 930
D+ KR +W +++DEAH +K+ S RW+ L++ N +RL+LTGTPLQN+L
Sbjct: 333 EQQKDDRKVLKRWRWSCVLMDEAHALKDKNSYRWKNLMSVARNANQRLMLTGTPLQNDLH 392
Query: 931 ELWSLLYFLMPQTALENGKVSGFADLDAFQQWFGRPVDKIVETGENYE----QDEETKKT 986
ELWSLL F++P + T EN + + E +
Sbjct: 393 ELWSLLEFMLPD----------------------------IFTTENVDLKKLLNAEDTEL 424
Query: 987 VSKLHQVLRPYLLRRLKADVEKQMPGKYEHIIYCRLSKRQRFLY----DDFMSRAQTKET 1042
++++ +L P++LRRLK+DV +Q+ K + + Y + ++Q Y +++ + +Q +
Sbjct: 425 ITRMKSILGPFILRRLKSDVMQQLVPKIQRVEYVLMERKQEDAYKEAIEEYRAASQARLV 484
Query: 1043 LASGNFMS----------IINCLMQLRKVCNHPDLFEVRPILTSFCIEDSVSKSY----- 1087
S ++ I N Q RK+ NHP L +R I + + K +
Sbjct: 485 KLSSKSLNSLAKALPKRQISNYFTQFRKIANHPLL--IRRIYSDEDVIRIARKLHPIGAF 542
Query: 1088 ---CDLNNYVYNRLHENQFETSVDLSNLNFQFTSNDK--TLSTNH---SEKISELQCVQP 1139
C L+ + N F + L FQ+ ND TLS H S K L + P
Sbjct: 543 GFECSLDRVIEEVKGFNDFR----IHQLLFQYGVNDTKGTLSDKHVMLSAKCRTLAELLP 598
Query: 1140 ILKE 1143
+K+
Sbjct: 599 SMKK 602
Score = 150 bits (378), Expect = 2e-35
Identities = 72/142 (50%), Positives = 101/142 (70%)
Query: 1325 NGHRALIFTQMTKVLDILEQFLNFHGYLYMRLDGATKIEDRQILTERFNSDPRITVFILS 1384
+GHR LIF+Q T +LDILE L+ G Y RLDG+T++ DRQ + + FN+D I +LS
Sbjct: 603 SGHRVLIFSQWTSMLDILEWTLDVIGVTYRRLDGSTQVTDRQTIVDTFNNDKSIFACLLS 662
Query: 1385 SRSGGLGINLTGADTVIFYDSDWNPAMDKQCQDRCHRIGQTRDVHIYRFVSDHTIESNIL 1444
+R+GG G+NLTGADTVI +D D+NP +D+Q +DRCHRIGQT+ V I+R V+ T++ NI
Sbjct: 663 TRAGGQGLNLTGADTVIIHDMDFNPQIDRQAEDRCHRIGQTKPVTIFRLVTKSTVDENIY 722
Query: 1445 KKANQKRHLDNVVIQTGDFTTD 1466
+ A +K LD V+++G D
Sbjct: 723 EIAKRKLVLDAAVLESGVHVDD 744
>Hs17454125 [K] KOG0392 SNF2 family DNA-dependent ATPase domain-containing
protein
Length = 1849
Score = 173 bits (438), Expect = 2e-42
Identities = 121/377 (32%), Positives = 180/377 (47%), Gaps = 44/377 (11%)
Query: 720 LPSPPKSDNELKDEKAETTESVTSPAAADPLAVSDVPVPSLLRGTLRIYQKQGLNWLASL 779
+P PP EL KA+ + L +PVP + LR YQ+ G+NWLA L
Sbjct: 1223 IPDPPNMSAELIQLKAKERHFLEQLLDGKKLENYKIPVP--INAELRKYQQDGVNWLAFL 1280
Query: 780 YNNKTNGILADEMGLGKTIQTISLLAYLACEKENWG-----------PHLIVVPTSVLLN 828
K +GIL D+MGLGKT+Q+I +LA C + P L+V P ++ +
Sbjct: 1281 NKYKLHGILCDDMGLGKTLQSICILAGDHCHRAQEYARSKLAECMPLPSLVVCPPTLTGH 1340
Query: 829 WEMEFKRFAPG--FKVLTYYGSPQQRREKRKGWNKPDAFHVCITSYQLVVHDQHSFKRKK 886
W E +F L Y G P +R + ++ ++ + SY +V +D F+ K
Sbjct: 1341 WVDEVGKFCSREYLNPLHYTGPPTERIRLQ---HQVKRHNLIVASYDVVRNDIDFFRNIK 1397
Query: 887 WQYMILDEAHNIKNFRSTRWQALLNFNTERRLLLTGTPLQNNLAELWSLLYFLMPQTALE 946
+ Y ILDE H IKN ++ +A+ R++L+GTP+QNN+ ELWSL FLMP
Sbjct: 1398 FNYCILDEGHVIKNGKTKLSKAVKQLTANYRIILSGTPIQNNVLELWSLFDFLMP----- 1452
Query: 947 NGKVSGFADLD-AFQQWFGRPVDKIVETGENYEQDEETKKTVSKLHQVLRPYLLRRLKAD 1005
GF + F +G+P+ + + + E + LH+ + P+LLRR+K D
Sbjct: 1453 -----GFLGTERQFAARYGKPILASRDARSSSREQEAGVLAMDALHRQVLPFLLRRMKED 1507
Query: 1006 VEKQMPGKYEHIIYCRLSKRQRFLYDDF---MSRAQTKETLASGNFMS------------ 1050
V + +P K YC LS Q LY+DF ++ ET++S
Sbjct: 1508 VLQDLPPKIIQDYYCTLSPLQVQLYEDFAKSRAKCDVDETVSSATLSEETEKPKLKATGH 1567
Query: 1051 IINCLMQLRKVCNHPDL 1067
+ L LRK+CNHP L
Sbjct: 1568 VFQALQYLRKLCNHPAL 1584
Score = 122 bits (307), Expect = 3e-27
Identities = 62/135 (45%), Positives = 84/135 (61%), Gaps = 3/135 (2%)
Query: 1327 HRALIFTQMTKVLDILEQFL---NFHGYLYMRLDGATKIEDRQILTERFNSDPRITVFIL 1383
HR LIF Q+ +LDI+E L + Y+RLDG+ R + RFN+DP I V +L
Sbjct: 1645 HRILIFCQLKSMLDIVEHDLLKPHLPSVTYLRLDGSIPPGQRHSIVSRFNNDPSIDVLLL 1704
Query: 1384 SSRSGGLGINLTGADTVIFYDSDWNPAMDKQCQDRCHRIGQTRDVHIYRFVSDHTIESNI 1443
++ GGLG+NLTGADTV+F + DWNP D Q DR HRIGQ R V++YR ++ T+E I
Sbjct: 1705 TTHVGGLGLNLTGADTVVFVEHDWNPMRDLQAMDRAHRIGQKRVVNVYRLITRGTLEEKI 1764
Query: 1444 LKKANQKRHLDNVVI 1458
+ K ++ N VI
Sbjct: 1765 MGLQKFKMNIANTVI 1779
>At5g44800 [R] KOG0383 Predicted helicase
Length = 2228
Score = 172 bits (437), Expect = 3e-42
Identities = 117/351 (33%), Positives = 180/351 (50%), Gaps = 39/351 (11%)
Query: 732 DEKAETTESVTSPAAADPLAVSDVPVPSLLRG-TLRIYQKQGLNWLASLYNNKTNGILAD 790
++K S +P V+ P LRG L +Q + LNWL ++ N ILAD
Sbjct: 641 EQKTLERNSKGNPTRERGEVVTLTEQPQELRGGALFAHQLEALNWLRRCWHKSKNVILAD 700
Query: 791 EMGLGKTIQTISLLAYLACEKENWGPHLIVVPTSVLLNWEMEFKRFAPGFKVLTYYGSPQ 850
EMGLGKT+ + L+ L E P L++VP S + NW EF +AP V+ Y+GS +
Sbjct: 701 EMGLGKTVSASAFLSSLYFEFGVARPCLVLVPLSTMPNWLSEFSLWAPLLNVVEYHGSAK 760
Query: 851 QRREKRK-GWN---------KPDA--FHVCITSYQLVVHDQHSFKRKKWQYMILDEAHNI 898
R R W+ KP + F+V +T+Y++V+ D + W+ +++DE H +
Sbjct: 761 GRAIIRDYEWHAKNSTGTTKKPTSYKFNVLLTTYEMVLADSSHLRGVPWEVLVVDEGHRL 820
Query: 899 KNFRSTRWQALLNFNTERRLLLTGTPLQNNLAELWSLLYFLMPQTALENGKVSGFADLDA 958
KN S + L F+ + R+LLTGTPLQNN+ E+++LL FL P S F L +
Sbjct: 821 KNSESKLFSLLNTFSFQHRVLLTGTPLQNNIGEMYNLLNFLQP---------SSFPSLSS 871
Query: 959 FQQWFGRPVDKIVETGENYEQDEETKKTVSKLHQVLRPYLLRRLKADVEKQMPGKYEHII 1018
F++ F D + + V +L +++ P++LRRLK D + +P K E ++
Sbjct: 872 FEERF---------------HDLTSAEKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMV 916
Query: 1019 YCRLSKRQRFLYDDFMSR-AQTKETLASG-NFMSIINCLMQLRKVCNHPDL 1067
L+ Q Y +++ Q + G S++N +MQLRKVCNHP L
Sbjct: 917 PVELTSIQAEYYRAMLTKNYQILRNIGKGVAQQSMLNIVMQLRKVCNHPYL 967
Score = 129 bits (325), Expect = 3e-29
Identities = 68/135 (50%), Positives = 90/135 (66%), Gaps = 2/135 (1%)
Query: 1326 GHRALIFTQMTKVLDILEQFLN--FHGYLYMRLDGATKIEDRQILTERFNSDPRITVFIL 1383
GHR LIF+QMTK+LDILE +LN F + R+DG+ + DRQ RFN D VF+L
Sbjct: 1006 GHRVLIFSQMTKLLDILEDYLNIEFGPKTFERVDGSVAVADRQAAIARFNQDKNRFVFLL 1065
Query: 1384 SSRSGGLGINLTGADTVIFYDSDWNPAMDKQCQDRCHRIGQTRDVHIYRFVSDHTIESNI 1443
S+R+ GLGINL ADTVI YDSD+NP D Q +R HRIGQ++ + +YR V ++E I
Sbjct: 1066 STRACGLGINLATADTVIIYDSDFNPHADIQAMNRAHRIGQSKRLLVYRLVVRASVEERI 1125
Query: 1444 LKKANQKRHLDNVVI 1458
L+ A +K LD + +
Sbjct: 1126 LQLAKKKLMLDQLFV 1140
>7300091 [K] KOG0392 SNF2 family DNA-dependent ATPase domain-containing
protein
Length = 1861
Score = 170 bits (430), Expect = 2e-41
Identities = 120/375 (32%), Positives = 182/375 (48%), Gaps = 40/375 (10%)
Query: 714 NSKTEELPSPPKSDNELKDEKAETTESVTSPAAADPLAVSDVPVPSLLRGTLRIYQKQGL 773
+ KTE+L S P + +D + +P ++ + VP + LR YQ+ G+
Sbjct: 1244 DGKTEQLKSDPLQARKTRDREF-------LDYLFNPKSIPNYKVPVPISVELRCYQQAGI 1296
Query: 774 NWLASLYNNKTNGILADEMGLGKTIQTISLLA--YLACEKENWG--PHLIVVPTSVLLNW 829
NWL L +GIL D+MGLGKT+QTI +LA ++ + N P L++ P ++ +W
Sbjct: 1297 NWLWFLNKYNLHGILCDDMGLGKTLQTICILAGDHMHRQTANLANLPSLVICPPTLTGHW 1356
Query: 830 EMEFKRFAPGFKVLT---YYGSPQQRREKRKGWNKPDAFHVCITSYQLVVHDQHSFKRKK 886
E ++F VL YYG P R + R ++ + SY V D F
Sbjct: 1357 VYEVEKFLDQGSVLRPLHYYGFPVGREKLRSDIGTK--CNLVVASYDTVRKDIDFFSGIH 1414
Query: 887 WQYMILDEAHNIKNFRSTRWQALLNFNTERRLLLTGTPLQNNLAELWSLLYFLMPQTALE 946
+ Y +LDE H IKN ++ +A+ RL+L+GTP+QNN+ ELWSL FLMP
Sbjct: 1415 FNYCVLDEGHIIKNGKTKSSKAIKRLKANHRLILSGTPIQNNVLELWSLFDFLMP----- 1469
Query: 947 NGKVSGFADLD-AFQQWFGRPVDKIVETGENYEQDEETKKTVSKLHQVLRPYLLRRLKAD 1005
GF + F Q F RP+ + + ++ E + LH+ + P+LLRR+K D
Sbjct: 1470 -----GFLGTEKQFVQRFSRPILSSRDAKSSAKEQEAGVLAMEALHRQVLPFLLRRVKED 1524
Query: 1006 VEKQMPGKYEHIIYCRLSKRQRFLYDDFMSR----------AQTKETLASGNFMS---II 1052
V K +P K + C LS Q LY+DF ++ + ++ + N + I
Sbjct: 1525 VLKDLPPKITQDLLCELSPLQLRLYEDFSNKHLKDCLDKLGDSSSASMVTENLSAKTHIF 1584
Query: 1053 NCLMQLRKVCNHPDL 1067
L L+ VCNHP L
Sbjct: 1585 QALRYLQNVCNHPKL 1599
Score = 124 bits (311), Expect = 1e-27
Identities = 69/166 (41%), Positives = 91/166 (54%), Gaps = 9/166 (5%)
Query: 1296 SVAFPDKSLLQYDCGXXXXXXXXXXXXXDNGHRALIFTQMTKVLDILEQFL---NFHGYL 1352
S P L DCG HRALIF Q+ +LDI+EQ L +
Sbjct: 1627 SAKLPALKQLLLDCGIGVQTESVSQ------HRALIFCQLKAMLDIVEQDLLRRHLPSVT 1680
Query: 1353 YMRLDGATKIEDRQILTERFNSDPRITVFILSSRSGGLGINLTGADTVIFYDSDWNPAMD 1412
Y+RLDG+ RQ + FNSDP I V +L++ GGLG+NLTGADTVIF + DWNP D
Sbjct: 1681 YLRLDGSVPASQRQDIVNNFNSDPSIDVLLLTTMVGGLGLNLTGADTVIFVEHDWNPMKD 1740
Query: 1413 KQCQDRCHRIGQTRDVHIYRFVSDHTIESNILKKANQKRHLDNVVI 1458
Q DR HRIGQ + V++YR ++ +++E I+ K N V+
Sbjct: 1741 LQAMDRAHRIGQKKVVNVYRLITRNSLEEKIMGLQKFKILTANTVV 1786
>YJR035w [KL] KOG0387 Transcription-coupled repair protein CSB/RAD26 (contains
SNF2 family DNA-dependent ATPase domain)
Length = 1085
Score = 167 bits (422), Expect = 2e-40
Identities = 123/371 (33%), Positives = 172/371 (46%), Gaps = 57/371 (15%)
Query: 744 PAAADPLAVSDVPVPSLLRGTLRIYQKQGLNWLASLYNNKTNGILADEMGLGKTIQTISL 803
P D S +P + L YQK + WL LY GI+ DEMGLGKTIQ I+
Sbjct: 276 PNIPDAKLNSQFKIPGEIYSLLFNYQKTCVQWLYELYQQNCGGIIGDEMGLGKTIQVIAF 335
Query: 804 LAYLACEKENWGPHLIVVPTSVLLNWEMEFKRFAPGFK--VLTYYGSPQQRREKRKGW-- 859
+A L GP LIV P +V+ W EF+ + P + +L GS +K K
Sbjct: 336 IAALHHSGLLTGPVLIVCPATVMKQWCNEFQHWWPPLRTVILHSMGSGMASDQKFKMDEN 395
Query: 860 --------NKPDAF--------------------------------HVCITSYQ-LVVHD 878
+KP F H+ IT+Y L +H
Sbjct: 396 DLENLIMNSKPSDFSYEDWKNSTRTKKALESSYHLDKLIDKVVTDGHILITTYVGLRIHS 455
Query: 879 QHSFKRKKWQYMILDEAHNIKNFRSTRWQALLNFNTERRLLLTGTPLQNNLAELWSLLYF 938
K KWQY +LDE H I+N S T R++L+GTP+QNNL ELWSL F
Sbjct: 456 DKLLK-VKWQYAVLDEGHKIRNPDSEISLTCKKLKTHNRIILSGTPIQNNLTELWSLFDF 514
Query: 939 LMPQTALENGKVSGFADLDAFQQWFGRPVDKIVETGENYEQDEETKKTVSKLHQVLRPYL 998
+ P GK+ L FQQ F P++ Q + K L ++ PYL
Sbjct: 515 IFP------GKL---GTLPVFQQQFVIPINIGGYANATNIQVQTGYKCAVALRDLISPYL 565
Query: 999 LRRLKADVEKQMPGKYEHIIYCRLSKRQRFLYDDFMSRAQTKETLASGNFMSIINCLMQL 1058
LRR+KADV K +P K E +++C+L+K QR Y +F+ + + + +G +++ + L
Sbjct: 566 LRRVKADVAKDLPQKKEMVLFCKLTKYQRSKYLEFLHSSDLNQ-IQNGK-RNVLFGIDIL 623
Query: 1059 RKVCNHPDLFE 1069
RK+CNHPDL +
Sbjct: 624 RKICNHPDLLD 634
Score = 120 bits (300), Expect = 2e-26
Identities = 61/138 (44%), Positives = 92/138 (66%), Gaps = 6/138 (4%)
Query: 1326 GHRALIFTQMTKVLDILEQFLN-----FHGYLYMRLDGATKIEDRQILTERFNSDPRITV 1380
G++AL+FTQ ++LDILE+F++ Y+R+DG T I+ RQ L +RFN++ V
Sbjct: 667 GYKALLFTQSRQMLDILEEFISTKDPDLSHLNYLRMDGTTNIKGRQSLVDRFNNES-FDV 725
Query: 1381 FILSSRSGGLGINLTGADTVIFYDSDWNPAMDKQCQDRCHRIGQTRDVHIYRFVSDHTIE 1440
F+L++R GGLG+NLTGA+ +I +D DWNP+ D Q ++R RIGQ R+V IYR + +IE
Sbjct: 726 FLLTTRVGGLGVNLTGANRIIIFDPDWNPSTDMQARERAWRIGQKREVSIYRLMVGGSIE 785
Query: 1441 SNILKKANQKRHLDNVVI 1458
I + K+ L N ++
Sbjct: 786 EKIYHRQIFKQFLTNRIL 803
>At3g54280 [K] KOG0392 SNF2 family DNA-dependent ATPase domain-containing
protein
Length = 2049
Score = 166 bits (419), Expect = 4e-40
Identities = 117/361 (32%), Positives = 175/361 (48%), Gaps = 39/361 (10%)
Query: 731 KDEKAETTESVTSPAAADPLAVSDVPVPSLLRGTLRIYQKQGLNWLASLYNNKTNGILAD 790
KD + ++ D + D + + L+ LR YQ++G+NWL L K +GIL D
Sbjct: 1410 KDLSSNAEDAKFLEQLLDNSHIDDYKLCTELKVQLRRYQQEGINWLGFLKRFKLHGILCD 1469
Query: 791 EMGLGKTIQTISLLAYLACEKENWG------PHLIVVPTSVLLNWEMEFKRFAPG--FKV 842
+MGLGKT+Q +++A A E+ P +IV P++++ +W E +++ V
Sbjct: 1470 DMGLGKTLQASAIVASDAAERRGSTDELDVFPSIIVCPSTLVGHWAFEIEKYIDLSLLSV 1529
Query: 843 LTYYGSPQQRREKRKGWNKPDAFHVCITSYQLVVHDQHSFKRKKWQYMILDEAHNIKNFR 902
L Y GS Q R R+ +N +V ITSY +V D + W Y ILDE H IKN +
Sbjct: 1530 LQYVGSAQDRVSLREQFNN---HNVIITSYDVVRKDVDYLTQFSWNYCILDEGHIIKNAK 1586
Query: 903 STRWQALLNFNTERRLLLTGTPLQNNLAELWSLLYFLMPQTALENGKVSGFADLD-AFQQ 961
S A+ + RL+L+GTP+QNN+ ELWSL FLMP GF + FQ
Sbjct: 1587 SKITAAVKQLKAQHRLILSGTPIQNNIMELWSLFDFLMP----------GFLGTERQFQA 1636
Query: 962 WFGRPVDKIVETGENYEQDEETKKTVSKLHQVLRPYLLRRLKADVEKQMPGKYEHIIYCR 1021
+G+P+ + + + E + LH+ + P+LLRR K +V +P K YC
Sbjct: 1637 SYGKPLLAARDPKCSAKDAEAGVLAMEALHKQVMPFLLRRTKEEVLSDLPEKIIQDRYCD 1696
Query: 1022 LSKRQRFLYDDFMSRAQTKE---------TLASGN--------FMSIINCLMQLRKVCNH 1064
LS Q LY+ F + +E + SGN + L L K+C+H
Sbjct: 1697 LSPVQLKLYEQFSGSSAKQEISSIIKVDGSADSGNADVAPTKASTHVFQALQYLLKLCSH 1756
Query: 1065 P 1065
P
Sbjct: 1757 P 1757
Score = 109 bits (273), Expect = 3e-23
Identities = 61/165 (36%), Positives = 85/165 (50%), Gaps = 14/165 (8%)
Query: 1308 DCGXXXXXXXXXXXXXDNGHRALIFTQMTKVLDILEQFL---NFHGYLYMRLDGATKIED 1364
+CG HR LIF Q +LDI+E+ L + YMRLDG+ E
Sbjct: 1805 ECGIGSDASSSDGTLSVGQHRVLIFAQHKALLDIIEKDLFQAHMKSVTYMRLDGSVVPEK 1864
Query: 1365 RQILTERFNSDPRITVFILSSRSGGLGINLTGADTVIFYDSDWNPAMDK----------- 1413
R + + FNSDP I V +L++ GGLG+NLT ADT++F + DWNP D
Sbjct: 1865 RFEIVKAFNSDPTIDVLLLTTHVGGLGLNLTSADTLVFMEHDWNPMRDHQFANIELNKLW 1924
Query: 1414 QCQDRCHRIGQTRDVHIYRFVSDHTIESNILKKANQKRHLDNVVI 1458
Q DR HR+GQ R V+++R + T+E ++ K + N VI
Sbjct: 1925 QAMDRAHRLGQKRVVNVHRLIMRGTLEEKVMSLQKFKVSVANTVI 1969
>At2g44980 [K] KOG0385 Chromatin remodeling complex WSTF-ISWI small subunit
Length = 861
Score = 164 bits (416), Expect = 8e-40
Identities = 111/317 (35%), Positives = 160/317 (50%), Gaps = 29/317 (9%)
Query: 764 TLRIYQKQGLNWLASLYNNKTNGILA-DEMGLGKTIQTISLLAYLACEKENWGPHLIVVP 822
TL+ +Q +G++WL Y N +L D+MGLGKT+Q IS L+YL + GP L++ P
Sbjct: 50 TLKPHQVEGVSWLIQKYLLGVNVVLELDQMGLGKTLQAISFLSYLKFRQGLPGPFLVLCP 109
Query: 823 TSVLLNWEMEFKRFAPGFKVLTYYGSPQQRREKRKGWNKPD---AFHVCITSYQLVVHDQ 879
SV W E RF P +VL Y G R + RK F V +T+Y + + DQ
Sbjct: 110 LSVTDGWVSEINRFTPNLEVLRYVGDKYCRLDMRKSMYDHGHFLPFDVLLTTYDIALVDQ 169
Query: 880 HSFKRKKWQYMILDEAHNIKNFRSTRWQALL-NFNTERRLLLTGTPLQNNLAELWSLLYF 938
+ WQY I+DEA +KN S + LL F RRLL+TGTP+QNNL ELW+L++F
Sbjct: 170 DFLSQIPWQYAIIDEAQRLKNPNSVLYNVLLEQFLIPRRLLITGTPIQNNLTELWALMHF 229
Query: 939 LMPQTALENGKVSGFADLDAFQQWFGRPVDKIVETGENYEQDEETKKTVSKLHQVLRPYL 998
MP F LD F F ETG+ + + K+T L +L ++
Sbjct: 230 CMPLV---------FGTLDQFLSAF-------KETGDGLDVSND-KETYKSLKFILGAFM 272
Query: 999 LRRLKADVEKQ----MPGKYEHIIYCRLSKRQRFLYDDFMSR---AQTKETLASGNFMSI 1051
LRR K+ + + +P E + L Q+ +Y + + + + N S+
Sbjct: 273 LRRTKSLLIESGNLVLPPLTELTVMVPLVSLQKKIYTSILRKELPGLLELSSGGSNHTSL 332
Query: 1052 INCLMQLRKVCNHPDLF 1068
N ++QLRK C+HP LF
Sbjct: 333 QNIVIQLRKACSHPYLF 349
Score = 126 bits (317), Expect = 2e-28
Identities = 63/146 (43%), Positives = 92/146 (62%), Gaps = 11/146 (7%)
Query: 1324 DNGHRALIFTQMTKVLDILEQFLNFHGYLYMRLDGATKIEDRQILTERFNS------DPR 1377
D+GHR L+F+QMT LDIL+ F+ Y Y RLDG+ + E+R + F++ D
Sbjct: 382 DSGHRVLLFSQMTSTLDILQDFMELRRYSYERLDGSVRAEERFAAIKNFSAKTERGLDSE 441
Query: 1378 IT-----VFILSSRSGGLGINLTGADTVIFYDSDWNPAMDKQCQDRCHRIGQTRDVHIYR 1432
+ VF++S+R+GG+G+NL ADTVIFY+ DWNP +DKQ R HRIGQ V
Sbjct: 442 VDGSNAFVFMISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQISHVLSIN 501
Query: 1433 FVSDHTIESNILKKANQKRHLDNVVI 1458
V++H++E IL++A +K L + V+
Sbjct: 502 LVTEHSVEEVILRRAERKLQLSHNVV 527
>ECU01g0350 [K] KOG0384 Chromodomain-helicase DNA-binding protein
Length = 1251
Score = 156 bits (395), Expect = 2e-37
Identities = 109/315 (34%), Positives = 159/315 (49%), Gaps = 38/315 (12%)
Query: 765 LRIYQKQGLNWLASLYNNKTNGILADEMGLGKTIQTISLLAYLACEKENWGPHLIVVPTS 824
LR YQ +GLNWL + + K + I+ADEMGLGKT+Q+++ + L + + P L+V P S
Sbjct: 302 LREYQLEGLNWLLNRWYYKQSCIMADEMGLGKTVQSVTFINTLFTKYDYCAPVLVVTPLS 361
Query: 825 VLLNWEMEFKRFAPGFKVLTYYGSPQQRR-------EKRKGWNKPDAFHVCITSYQLVVH 877
++ +WE EF+ + +VL Y+ + R +K + F V IT+Y V+
Sbjct: 362 IIPHWEREFEAWT-DLRVLKYHENRPGRALIAEYEFVLKKNNLEIRLFDVLITTYDTVMA 420
Query: 878 DQHSFKRKKWQYMILDEAHNIKNFRSTRWQALLNFNTERRLLLTGTPLQNNLAELWSLLY 937
+Q + + I DEAH +KN +S L ++LL+GTPLQNN++ELWSLL
Sbjct: 421 EQEHLSQFHFSVGIFDEAHRLKNAKSKAATILRTLKFNHKVLLSGTPLQNNISELWSLLN 480
Query: 938 FLMPQTALENGKVSGFADLDAFQQWFGRPVDKIVETGENYEQDEETKKTVSKLHQVLRPY 997
F+ P F+ L F F E V KL +LRP
Sbjct: 481 FIDPMR---------FSSLPHFLGEF----------------KMENINDVEKLQGLLRPL 515
Query: 998 LLRRLKADVEKQMPGKYEHIIYCRLSKRQRFLYDDFMSRAQTKETLASGNFMS---IINC 1054
+LRR+K DVEK +P K E II L+ Q+ Y + + E L G S ++N
Sbjct: 516 MLRRMKEDVEKSIPTKEETIIEVALTMIQKRFYRAILEK--NIEFLTKGGKESAPNLLNV 573
Query: 1055 LMQLRKVCNHPDLFE 1069
+M+LRK C HP L +
Sbjct: 574 MMELRKCCIHPYLIK 588
Score = 147 bits (372), Expect = 1e-34
Identities = 73/154 (47%), Positives = 100/154 (64%), Gaps = 1/154 (0%)
Query: 1325 NGHRALIFTQMTKVLDILEQFLNFHGYLYMRLDGATKIEDRQILTERFNSDPR-ITVFIL 1383
+GH+ LIF+QMT+ LD+L ++L + Y Y R+DG + E+RQ +RF+ + VF+L
Sbjct: 663 DGHKVLIFSQMTRCLDLLAEYLAYRKYKYERIDGGARTENRQAAIDRFSDKTSDVFVFLL 722
Query: 1384 SSRSGGLGINLTGADTVIFYDSDWNPAMDKQCQDRCHRIGQTRDVHIYRFVSDHTIESNI 1443
S+R+GG+GINLT ADTVI +DSDWNP D Q Q RCHRIGQT +V +YR V+++T E +
Sbjct: 723 STRAGGVGINLTAADTVIIFDSDWNPQNDLQAQARCHRIGQTSEVKVYRLVTENTYEREM 782
Query: 1444 LKKANQKRHLDNVVIQTGDFTTDYFTKLSVKDLL 1477
KA K LD V+Q F K KD +
Sbjct: 783 FDKAGLKLGLDRAVLQKMTFEEQKSEKTRKKDAI 816
>At2g18760 [KL] KOG0387 Transcription-coupled repair protein CSB/RAD26 (contains
SNF2 family DNA-dependent ATPase domain)
Length = 1187
Score = 155 bits (391), Expect = 6e-37
Identities = 106/346 (30%), Positives = 158/346 (45%), Gaps = 45/346 (13%)
Query: 757 VPSLLRGTLRIYQKQGLNWLASLYNNKTNGILADEMGLGKTIQTISLLAYLACEKENWGP 816
+P + L YQ+ G+ WL L+ + GI+ DEMGLGKTIQ +S L L K + P
Sbjct: 377 IPECIFRKLFDYQRVGVQWLWELHCQRAGGIIGDEMGLGKTIQVLSFLGSLHFSKM-YKP 435
Query: 817 HLIVVPTSVLLNWEMEFKRFAPGFKVLTYYGSPQQ------------------------R 852
+I+ P ++L W E +++ P F V + S Q
Sbjct: 436 SIIICPVTLLRQWRREAQKWYPDFHVEILHDSAQDSGHGKGQGKASESDYDSESSVDSDH 495
Query: 853 REKRKGWNKPDAF---------HVCITSYQLVVHDQHSFKRKKWQYMILDEAHNIKNFRS 903
K K K D+ + IT+Y+ + +W Y +LDE H I+N S
Sbjct: 496 EPKSKNTKKWDSLLNRVLNSESGLLITTYEQLRLQGEKLLNIEWGYAVLDEGHRIRNPNS 555
Query: 904 TRWQALLNFNTERRLLLTGTPLQNNLAELWSLLYFLMPQTALENGKVSGFADLDAFQQWF 963
T R+++TG P+QN L ELWSL F+ P GK+ L F+ F
Sbjct: 556 DITLVCKQLQTVHRIIMTGAPIQNKLTELWSLFDFVFP------GKL---GVLPVFEAEF 606
Query: 964 GRPVDKIVETGENYEQDEETKKTVSKLHQVLRPYLLRRLKADVEKQMPGKYEHIIYCRLS 1023
P+ + Q + L ++ PYLLRR+KADV + K EH+++C L+
Sbjct: 607 SVPITVGGYANASPLQVSTAYRCAVVLRDLIMPYLLRRMKADVNAHLTKKTEHVLFCSLT 666
Query: 1024 KRQRFLYDDFMSRAQTKETLASGNFMSIINCLMQLRKVCNHPDLFE 1069
QR Y F++ ++ E + GN S+ + +RK+CNHPDL E
Sbjct: 667 VEQRSTYRAFLASSEV-EQIFDGNRNSLYG-IDVMRKICNHPDLLE 710
Score = 128 bits (321), Expect = 8e-29
Identities = 63/151 (41%), Positives = 94/151 (61%), Gaps = 1/151 (0%)
Query: 1326 GHRALIFTQMTKVLDILEQFLNFHGYLYMRLDGATKIEDRQILTERFNSDPRITVFILSS 1385
GHR L+F+Q ++LDILE FL + Y Y R+DG T ++ R L + FN+ + VF+L++
Sbjct: 743 GHRVLLFSQTQQMLDILESFLVANEYSYRRMDGLTPVKQRMALIDEFNNSEDMFVFVLTT 802
Query: 1386 RSGGLGINLTGADTVIFYDSDWNPAMDKQCQDRCHRIGQTRDVHIYRFVSDHTIESNILK 1445
+ GGLG NLTGA+ VI +D DWNP+ D Q ++R RIGQ +DV +YR ++ TIE +
Sbjct: 803 KVGGLGTNLTGANRVIIFDPDWNPSNDMQARERAWRIGQKKDVTVYRLITRGTIEEKVYH 862
Query: 1446 KANQKRHLDNVVIQTGDFTTDYFTKLSVKDL 1476
+ K L N +++ +F +KDL
Sbjct: 863 RQIYKHFLTNKILKNPQ-QRRFFKARDMKDL 892
>SPBP35G2.10 [R] KOG0383 Predicted helicase
Length = 1418
Score = 154 bits (388), Expect = 1e-36
Identities = 112/328 (34%), Positives = 177/328 (53%), Gaps = 44/328 (13%)
Query: 758 PSLLRG-TLRIYQKQGLNWLASLYNNKTNGILADEMGLGKTIQTISLLAYLACEKENWGP 816
PS ++G TL YQ +GLNWL + ILADEMGLGKT+Q IS ++ L + + P
Sbjct: 548 PSFIKGGTLMPYQLKGLNWLYLRWYTHHPCILADEMGLGKTVQVISFISVLFYRHKCF-P 606
Query: 817 HLIVVPTSVLLNWEMEFKRFAPGFKVLTYYGSPQQRREKR--KGWNKPD----AFHVCIT 870
L++VP + + NWE E K++AP ++ GS + R R + N+ D + HV +
Sbjct: 607 VLVIVPHATVANWERELKKWAPFLQINVLVGSEKNRSLVRDYRLINQKDPKHVSTHVLVI 666
Query: 871 SYQLVVHDQHSFKRKKWQYMILDEAHNIKNFRSTRWQALLNFNTERRLLLTGTPLQNNLA 930
S V + ++ +W+ +I+DE +KN +S+ + L + ++ +LLLTGTPLQNN+
Sbjct: 667 SASNVEREISLLRKFQWKVLIVDEGQRLKNDQSSLFYYLSSVKSDFKLLLTGTPLQNNVR 726
Query: 931 ELWSLLYFLMPQTALENGKVSGFADLDAFQQWFGRPVDKIVETGENYEQDEETKKTVSKL 990
EL++LL FL P K++ A+L+ I++T + V++L
Sbjct: 727 ELFNLLQFLNPM------KINA-AELEKRY--------SIIDT-----------EKVTEL 760
Query: 991 HQVLRPYLLRRLKADVEKQMPGKYEHIIYCRLSKRQRFLYDDFMSRAQT--------KET 1042
HQ+L+P+ LRR+K++V P K E II ++ Q+ LY +S+ + T
Sbjct: 761 HQILKPFFLRRVKSEVLDNFPTKVEVIIPLSMTPVQKGLYKSILSKNLSLLRNITGYANT 820
Query: 1043 LASG--NFMSIINCLMQLRKVCNHPDLF 1068
+SG S+ N LMQLRK HP ++
Sbjct: 821 SSSGGQRTTSLNNILMQLRKTLAHPYIY 848
Score = 109 bits (273), Expect = 3e-23
Identities = 54/138 (39%), Positives = 86/138 (62%), Gaps = 1/138 (0%)
Query: 1326 GHRALIFTQMTKVLDILEQFLNFHGYLYMRLDGATKIEDRQILTERFNS-DPRITVFILS 1384
GHR L+F+Q + LDILE + + Y R DGA+ +RQ + FN+ + ++ F+LS
Sbjct: 887 GHRILLFSQFIQQLDILEDWFEYKNIAYARFDGASSEMERQSAIDSFNAPNSELSCFLLS 946
Query: 1385 SRSGGLGINLTGADTVIFYDSDWNPAMDKQCQDRCHRIGQTRDVHIYRFVSDHTIESNIL 1444
+R+GG+GINL ADTVI D D+NP D Q R HR GQ + V ++ + ++E I+
Sbjct: 947 TRAGGVGINLASADTVIILDPDFNPHQDMQAIARAHRYGQKKKVLVFVLTTRDSVEEKII 1006
Query: 1445 KKANQKRHLDNVVIQTGD 1462
+ A +K LD++++++ D
Sbjct: 1007 QNAQKKLVLDHLIVESLD 1024
>SPCP25A2.02c [KL] KOG0387 Transcription-coupled repair protein CSB/RAD26 (contains
SNF2 family DNA-dependent ATPase domain)
Length = 973
Score = 153 bits (386), Expect = 2e-36
Identities = 105/347 (30%), Positives = 157/347 (44%), Gaps = 47/347 (13%)
Query: 757 VPSLLRGTLRIYQKQGLNWLASLYNNKTNGILADEMGLGKTIQTISLLAYLACEKENWGP 816
+P +R L YQ + WL LY + GI+ DEMGLGKTIQ +S L+ L + P
Sbjct: 269 IPGDIRPHLFRYQVTCVQWLWELYCQEAGGIIGDEMGLGKTIQIVSFLSSLHHSGKFQKP 328
Query: 817 HLIVVPTSVLLNWEMEFKRFAPGFKVLTYYGSPQ-QRREKRKGWNKPDAF---------- 865
LIV P +++ W EF + +V+ + + QR + K + DA
Sbjct: 329 ALIVCPATLMKQWVNEFHTWWAPLRVVVLHATGSGQRASREKRQYESDASESEAEESKTS 388
Query: 866 -------------------------HVCITSYQLVVHDQHSFKRKKWQYMILDEAHNIKN 900
H+ IT+Y + ++W Y +LDE H I+N
Sbjct: 389 IKLRGASSSFHRYAKNLVESVFTRGHILITTYAGLRIYGDLILPREWGYCVLDEGHKIRN 448
Query: 901 FRSTRWQALLNFNTERRLLLTGTPLQNNLAELWSLLYFLMPQTALENGKVSGFADLDAFQ 960
S + T R++L+GTP+QNNL ELW+L F+ P L FQ
Sbjct: 449 PDSEISISCKQIRTVNRIILSGTPIQNNLTELWNLFDFVFP---------GRLGTLPVFQ 499
Query: 961 QWFGRPVDKIVETGENYEQDEETKKTVSKLHQVLRPYLLRRLKADVEKQMPGKYEHIIYC 1020
F P++ + Q + K L ++ PYLLRR+K DV +P K E +++C
Sbjct: 500 NQFALPINIGGYANASNVQVQTAYKCACMLRDLISPYLLRRMKLDVAADLPKKSEQVLFC 559
Query: 1021 RLSKRQRFLYDDFMSRAQTKETLASGNFMSIINCLMQLRKVCNHPDL 1067
+L+ QR Y DF+ + ++ L M + + LRK+CNHPDL
Sbjct: 560 KLTPLQRKAYQDFLQGSDMQKILNGKRQM--LYGIDILRKICNHPDL 604
Score = 119 bits (298), Expect = 4e-26
Identities = 61/135 (45%), Positives = 88/135 (65%), Gaps = 1/135 (0%)
Query: 1326 GHRALIFTQMTKVLDILEQFL-NFHGYLYMRLDGATKIEDRQILTERFNSDPRITVFILS 1384
GHR L+F+Q ++LDILE L + Y R+DG+T I RQ L + FN + VF+L+
Sbjct: 641 GHRTLLFSQTRQMLDILEIGLKDLPDVHYCRMDGSTSIALRQDLVDNFNKNEYFDVFLLT 700
Query: 1385 SRSGGLGINLTGADTVIFYDSDWNPAMDKQCQDRCHRIGQTRDVHIYRFVSDHTIESNIL 1444
+R GGLG+NLTGAD VI +D DWNP+ D Q ++R R+GQ +DV +YR ++ TIE I
Sbjct: 701 TRVGGLGVNLTGADRVILFDPDWNPSTDAQARERAWRLGQKKDVVVYRLMTAGTIEEKIY 760
Query: 1445 KKANQKRHLDNVVIQ 1459
+ K+ L N +++
Sbjct: 761 HRQIFKQFLTNKILK 775
>HsM8922362 [K] KOG0385 Chromatin remodeling complex WSTF-ISWI small subunit
Length = 310
Score = 150 bits (380), Expect = 1e-35
Identities = 68/138 (49%), Positives = 97/138 (70%)
Query: 1326 GHRALIFTQMTKVLDILEQFLNFHGYLYMRLDGATKIEDRQILTERFNSDPRITVFILSS 1385
GH+ L+F+QMT +LDIL + + + + RLDG+ +R+ FN+DP + +F++S+
Sbjct: 52 GHKVLLFSQMTSMLDILMDYCHLRDFNFSRLDGSMSYSEREKNMHSFNTDPEVFIFLVST 111
Query: 1386 RSGGLGINLTGADTVIFYDSDWNPAMDKQCQDRCHRIGQTRDVHIYRFVSDHTIESNILK 1445
R+GGLGINLT ADTVI YDSDWNP D Q QDRCHRIGQT+ V +YR V+ +TI+ I++
Sbjct: 112 RAGGLGINLTAADTVIIYDSDWNPQSDLQAQDRCHRIGQTKPVVVYRLVTANTIDQKIVE 171
Query: 1446 KANQKRHLDNVVIQTGDF 1463
+A KR L+ ++I F
Sbjct: 172 RAAAKRKLEKLIIHKNHF 189
>Hs14767157 [K] KOG0385 Chromatin remodeling complex WSTF-ISWI small subunit
Length = 348
Score = 150 bits (380), Expect = 1e-35
Identities = 68/138 (49%), Positives = 97/138 (70%)
Query: 1326 GHRALIFTQMTKVLDILEQFLNFHGYLYMRLDGATKIEDRQILTERFNSDPRITVFILSS 1385
GH+ L+F+QMT +LDIL + + + + RLDG+ +R+ FN+DP + +F++S+
Sbjct: 125 GHKVLLFSQMTSMLDILMDYCHLRDFNFSRLDGSMSYSEREKNMHSFNTDPEVFIFLVST 184
Query: 1386 RSGGLGINLTGADTVIFYDSDWNPAMDKQCQDRCHRIGQTRDVHIYRFVSDHTIESNILK 1445
R+GGLGINLT ADTVI YDSDWNP D Q QDRCHRIGQT+ V +YR V+ +TI+ I++
Sbjct: 185 RAGGLGINLTAADTVIIYDSDWNPQSDLQAQDRCHRIGQTKPVVVYRLVTANTIDQKIVE 244
Query: 1446 KANQKRHLDNVVIQTGDF 1463
+A KR L+ ++I F
Sbjct: 245 RAAAKRKLEKLIIHKNHF 262
>ECU09g0410 [KL] KOG0387 Transcription-coupled repair protein CSB/RAD26 (contains
SNF2 family DNA-dependent ATPase domain)
Length = 695
Score = 147 bits (371), Expect = 1e-34
Identities = 99/328 (30%), Positives = 158/328 (47%), Gaps = 28/328 (8%)
Query: 757 VPSLLRGTLRIYQKQGLNWLASLYNNKTNGILADEMGLGKTIQTISLLAYLACEKENWGP 816
VP L +L YQ+ G+ W+ LY ++ G+LAD+MGLGKTIQ I L L +
Sbjct: 143 VPGFLWSSLFPYQQDGVRWMLRLYRDEKGGVLADDMGLGKTIQVIVFLGALLHSRVV-SK 201
Query: 817 HLIVVPTSVLLNWEMEFKRFAPGFKVLTYYGSPQQRREKRKGWNKPDAFHVCITSYQLVV 876
LI+ P +++ W E+KRF P ++ ++G P + D V + SY+
Sbjct: 202 ALILCPATIVSQWMDEWKRFYPFVRI--FFGFPNE-----------DCEGVYLMSYEKF- 247
Query: 877 HDQHSFKRKKWQYMILDEAHNIKNFRSTRWQALLNFNTERRLLLTGTPLQNNLAELWSLL 936
+ K W +ILDE H IKN + ++ + R +L+GTP+QNNL ELWS+
Sbjct: 248 --KAGVKNFLWDVLILDEGHRIKNKNAQITLSVKKARSRGRFVLSGTPIQNNLGELWSIF 305
Query: 937 YFLMPQTALENGKVSGFADLDAFQQWFGRPVDKIVETGENYEQDEETKKTVSKLHQVLRP 996
F+ P +F + F + + + Q E+ + L ++ P
Sbjct: 306 DFVNPGL---------LGSHTSFNEEFEEVIRRGGYRNASNLQVEKAYRHSLMLRSLIEP 356
Query: 997 YLLRRLKADVEKQMPGKYEHIIYCRLSKRQRFLYDDFMSRAQTKETLASGNFMSIINCLM 1056
Y+LRR K+ V ++P K + I++C L+ Q LY+ + + L ++++ +
Sbjct: 357 YILRRTKSQVSHKLPSKEDKIVFCSLTPAQIELYNRVLESKHIMKVLTGK--ANLLSGIS 414
Query: 1057 QLRKVCNHPDLFEVRPILTSFCIEDSVS 1084
LRKVCNHP L R + S E+ S
Sbjct: 415 MLRKVCNHPRLLFPRKLGVSEDCEEEAS 442
Score = 118 bits (296), Expect = 7e-26
Identities = 61/164 (37%), Positives = 95/164 (57%), Gaps = 3/164 (1%)
Query: 1326 GHRALIFTQMTKVLDILEQFLNFHGYLYMRLDGATKIEDRQILTERFNSDPRITVFILSS 1385
G++ L+F+Q ++LDI+E+ + Y Y+R+DG T R L +RFN D + +F+L++
Sbjct: 484 GNKVLVFSQTIRMLDIIERCVR--KYTYLRMDGRTPTSSRPGLVDRFNEDEDVFLFLLTT 541
Query: 1386 RSGGLGINLTGADTVIFYDSDWNPAMDKQCQDRCHRIGQTRDVHIYRFVSDHTIESNILK 1445
+ GGLG+NLTGA ++ YD DWNP+ D Q ++R R GQ + V IYRFV TIE + +
Sbjct: 542 KVGGLGLNLTGASRIVIYDPDWNPSTDTQAKERAWRYGQKKGVEIYRFVCKDTIEEKVYQ 601
Query: 1446 KANQKRHLDNVVIQTGDFTTDYFTKLSVKDLLGAEAPEDIPDDK 1489
K K L V+ + +F K + +L D+ + K
Sbjct: 602 KQIFKDLLGKKVLSNPRLSR-FFNKSCINELFSFTMTGDLVEVK 644
>At1g03750 [KL] KOG0387 Transcription-coupled repair protein CSB/RAD26 (contains
SNF2 family DNA-dependent ATPase domain)
Length = 874
Score = 147 bits (371), Expect = 1e-34
Identities = 104/376 (27%), Positives = 182/376 (47%), Gaps = 66/376 (17%)
Query: 749 PLAVSDVPVPSLLRGTLRIYQKQGLNWLASLYNNKTNGILADEMGLGKTIQTISLLAYL- 807
P +++ VP+ + L +Q++G+ ++ +LY N GIL D+MGLGKTIQTI+ LA +
Sbjct: 135 PKSLTFAHVPASINCRLLEHQREGVKFMYNLYKNNHGGILGDDMGLGKTIQTIAFLAAVY 194
Query: 808 --------ACEKEN-WGPHLIVVPTSVLLNWEMEFKRFAPGFKVLTYYGSPQQRREKRKG 858
+C E+ GP LI+ P+S++ NWE EF R+A FKV Y+GS + ++
Sbjct: 195 GKDGDAGESCLLESDKGPVLIICPSSIIHNWESEFSRWASFFKVSVYHGSNRDMILEKL- 253
Query: 859 WNKPDAFHVCITSYQLVVHDQHSFKRKKWQYMILDEAHNIKNFRSTRWQALLNFNTERRL 918
K V +TS+ W+ +I DEAH +KN +S ++A L T++R+
Sbjct: 254 --KARGVEVLVTSFDTFRIQGPVLSGINWEIVIADEAHRLKNEKSKLYEACLEIKTKKRI 311
Query: 919 LLTGTPLQNNLAELWSLLYFLMPQTALENGKVSGFADLDAFQQWFGRP--VDKIVETGEN 976
LTGT +QN ++EL++L ++ P + F+ ++ P + + E
Sbjct: 312 GLTGTVMQNKISELFNLFEWVAP---------GSLGTREHFRDFYDEPLKLGQRATAPER 362
Query: 977 YEQDEETKKTVSKLHQVLRPYLLRRLKAD-VEKQMPGKYEHIIYCRLSKRQRFLYDDFMS 1035
+ Q + +K L +LR Y+LRR K + + M GK +++++C++S+ QR +Y +
Sbjct: 363 FVQIADKRK--QHLGSLLRKYMLRRTKEETIGHLMMGKEDNVVFCQMSQLQRRVYQRMIQ 420
Query: 1036 RAQTKETLASGN---------------------------------------FMSIINCLM 1056
+ + + N F ++ CLM
Sbjct: 421 LPEIQCLVNKDNPCACGSPLKQSECCRRIVPDGTIWSYLHRDNHDGCDSCPFCLVLPCLM 480
Query: 1057 QLRKVCNHPDLFEVRP 1072
+L+++ NH +L + P
Sbjct: 481 KLQQISNHLELIKPNP 496
Score = 120 bits (301), Expect = 2e-26
Identities = 64/173 (36%), Positives = 99/173 (56%), Gaps = 2/173 (1%)
Query: 1296 SVAFPDKSLLQYDCGXXXXXXXXXXXXXDNGHRALIFTQMTKVLDILEQFLNFHGYLYMR 1355
S +F D S +++ CG G + L+F+ ++LDILE+FL GY + R
Sbjct: 527 SKSFMDLSDVKH-CGKMRALEKLMASWISKGDKILLFSYSVRMLDILEKFLIRKGYSFAR 585
Query: 1356 LDGATKIEDRQILTERFNSDPRITVFILSSRSGGLGINLTGADTVIFYDSDWNPAMDKQC 1415
LDG+T RQ L + FN+ P VF++S+++GGLG+NL A+ V+ +D +WNP+ D Q
Sbjct: 586 LDGSTPTNLRQSLVDDFNASPSKQVFLISTKAGGLGLNLVSANRVVIFDPNWNPSHDLQA 645
Query: 1416 QDRCHRIGQTRDVHIYRFVSDHTIESNILKKANQKRHLDNVVIQTGDFTTDYF 1468
QDR R GQ R V ++R +S ++E + + K+ L N+ + G T YF
Sbjct: 646 QDRSFRYGQKRHVVVFRLLSAGSLEELVYTRQVYKQQLSNIAV-AGKMETRYF 697
>Hs13376715 [K] KOG0384 Chromodomain-helicase DNA-binding protein
Length = 336
Score = 144 bits (363), Expect = 1e-33
Identities = 98/291 (33%), Positives = 150/291 (50%), Gaps = 39/291 (13%)
Query: 792 MGLGKTIQTISLLAYLACEKENWGPHLIVVPTSVLLNWEMEFKRFAPGFKVLTYYGS--P 849
MGLGKTIQ+I+ L + GP LI+ P S + NWE EF+ + V+ Y+GS
Sbjct: 1 MGLGKTIQSITFLYEILLTGIR-GPFLIIAPLSTIANWEREFRTWTD-INVVVYHGSLIS 58
Query: 850 QQRREKRKGWNKPDA---------FHVCITSYQLVVHDQHSFKRKKWQYMILDEAHNIKN 900
+Q ++ + + + F IT++++++ +W+ +I+DEAH +KN
Sbjct: 59 RQMIQQYEMYFRDSQGRIIRGAYRFQAIITTFEMILGGCGELNAIEWRCVIIDEAHRLKN 118
Query: 901 FRSTRWQALLNFNTERRLLLTGTPLQNNLAELWSLLYFLMPQTALENGKVSGFADLDAFQ 960
+ L N E ++LLTGTPLQN + EL+SLL+FL P F F
Sbjct: 119 KNCKLLEGLKLMNLEHKVLLTGTPLQNTVEELFSLLHFLEPLR---------FPSESTFM 169
Query: 961 QWFGRPVDKIVETGENYEQDEETKKTVSKLHQVLRPYLLRRLKADVEKQMPGKYEHIIYC 1020
Q FG D ET++ V KL +L+P +LRRLK DVEK++ K E II
Sbjct: 170 QEFG---------------DLETEEQVQKLQAILKPMMLRRLKEDVEKKLAPKEETIIEV 214
Query: 1021 RLSKRQRFLYDDFMSRAQTKETLASG--NFMSIINCLMQLRKVCNHPDLFE 1069
L+ Q+ Y + + + + +G N +++N +M+LRK CNHP L +
Sbjct: 215 ELTNIQKKYYRAILEKNFSFLSKGAGQTNVPNLVNTMMELRKCCNHPYLIK 265
>Hs6912622_2 [L] KOG0390 DNA repair protein SNF2 family
Length = 808
Score = 140 bits (352), Expect = 2e-32
Identities = 101/350 (28%), Positives = 173/350 (48%), Gaps = 32/350 (9%)
Query: 754 DVPVPSLLRGTLRIYQKQGLNWLASLY-----NNKTNGILADEMGLGKTIQTISLLAYLA 808
DV + L LR +QK+G+ +L N + ILADEMGLGKT+Q ISL+ L
Sbjct: 183 DVVIDPYLVYHLRPHQKEGIIFLYECVMGMRMNGRCGAILADEMGLGKTLQCISLIWTLQ 242
Query: 809 CEKENWGPH-----LIVVPTSVLLNWEMEFKRFAPGFKVLTYYGSPQQRREKRKGWNKPD 863
C+ G LIV P S++ NW+ EF+++ ++ + + E+ + K
Sbjct: 243 CQGPYGGKPVIKKTLIVTPGSLVNNWKKEFQKWLGSERIKIFTVDQDHKVEE---FIKSI 299
Query: 864 AFHVCITSYQLVVHDQHSFKRKKWQYMILDEAHNIKNFRSTRWQALLNFNTERRLLLTGT 923
+ V I SY++++ K K+ +I DE H +KN AL++ + E+R++LTGT
Sbjct: 300 FYSVLIISYEMLLRSLDQIKNIKFDLLICDEGHRLKNSAIKTTTALISLSCEKRIILTGT 359
Query: 924 PLQNNLAELWSLLYFLMPQTALENGKVSGFADLDAFQQWFGRPVDKIVETGENYEQDEET 983
P+QN+L E ++L+ F+ P L ++++ + P+ E + E+ E
Sbjct: 360 PIQNDLQEFFALIDFVNPGI---------LGSLSSYRKIYEEPIILSREPSASEEEKELG 410
Query: 984 KKTVSKLHQVLRPYLLRRLKADVEKQMPGKYEHIIYCRLSKRQRFLYDDFMSRAQTKETL 1043
++ ++L + ++LRR + + K +P K E++++CR Q LY ++ + L
Sbjct: 411 ERRAAELTCLTGLFILRRTQEIINKYLPPKIENVVFCRPGALQIELYRKLLNSQVVRFCL 470
Query: 1044 AS--GNFMSIINCLMQLRKVCNHPDLFEVRPILTSFCIEDSVSKSYCDLN 1091
N +I C+ L+K+CNH P L I++ S CD N
Sbjct: 471 QGLLENSPHLI-CIGALKKLCNH-------PCLLFNSIKEKECSSTCDKN 512
Score = 108 bits (270), Expect = 7e-23
Identities = 61/151 (40%), Positives = 87/151 (57%), Gaps = 5/151 (3%)
Query: 1328 RALIFTQMTKVLDILEQFLNFHGYLYMRLDGATKIEDRQILTERFNSD-PRITVFILSSR 1386
+ ++ + T+ L+IL++ HGY Y RLDG T I RQ + + FNS +F+LSS+
Sbjct: 560 KVVLVSNYTQTLNILQEVCKRHGYAYTRLDGQTPISQRQQIVDGFNSQHSSFFIFLLSSK 619
Query: 1387 SGGLGINLTGADTVIFYDSDWNPAMDKQCQDRCHRIGQTRDVHIYRFVSDHTIESNILKK 1446
+GG+G+NL G +I YD DWNPA D Q R R GQ VHIYR ++ TIE I ++
Sbjct: 620 AGGVGLNLIGGSHLILYDIDWNPATDIQAMSRVWRDGQKYPVHIYRLLTTGTIEEKIYQR 679
Query: 1447 ANQKRHLDNVVIQTGDFT-TDYFTKLSVKDL 1476
K+ L V+ D T T + SV++L
Sbjct: 680 QISKQGLCGAVV---DLTKTSEHIQFSVEEL 707
>CE11028 [KL] KOG0387 Transcription-coupled repair protein CSB/RAD26 (contains
SNF2 family DNA-dependent ATPase domain)
Length = 1785
Score = 138 bits (348), Expect = 6e-32
Identities = 109/372 (29%), Positives = 179/372 (47%), Gaps = 54/372 (14%)
Query: 724 PKSDNELKDEKAETTESVTSPAAADPLAVSDVPVPSLLRGTLRIYQKQGLNWLASLYNNK 783
P++ +EL D + T+E ++ P V+ + + L +Q++G+ WL +++
Sbjct: 160 PEATSELVDTRMVTSEEYGK--SSKPWKVN-----AGVWNKLHKFQQEGVEWLQKKTDHR 212
Query: 784 TNGILADEMGLGKTIQTISLLAYLACEKENWGPH---------LIVVPTSVLLNWEMEFK 834
+ GILADEMGLGKTIQ++ +L +E H LIV S++ W E
Sbjct: 213 SGGILADEMGLGKTIQSV---VFLRSIQETARTHYKTTGLDTALIVCHVSIIAQWIKELN 269
Query: 835 RFAPGFKVLT------------YYGSPQQRREKRKGWNKPDAFHVCITSYQLVVHDQHSF 882
++ P +V Y GS ++ ++R+ PD + +T+Y L +
Sbjct: 270 QWFPKARVFLLHSHCSTGRQEDYVGSIFRKLQRRRK-EYPDGA-IILTTYSLFTKLKKPI 327
Query: 883 KRKKWQYMILDEAHNIKNFRSTRWQALLNFNTERRLLLTGTPLQNNLAELWSLLYFLMPQ 942
+ WQ +ILDE H I+N + A+ T +R +LTGTP QN L+E W L+ F+ P
Sbjct: 328 VKHLWQVVILDEGHYIRNENTKCSIAMRKLMTTQRFILTGTPFQNRLSEFWKLVDFVHP- 386
Query: 943 TALENGKVSGFADLDAFQQWFGRPVDKIVETGENY----EQDEETKKTVSKLHQVLRPYL 998
G++S A F R I+ G N E + + + LH ++P +
Sbjct: 387 -----GRLSDSAT-------FHRNFTHIINAGANLNCSPEAAAKAYECLVALHIAVKPLI 434
Query: 999 LRRLKADVEK--QMPGKYEHIIYCRLSKRQRFLYDDFMSRAQTKETLASGNFMSIINCLM 1056
LRRL+ D ++ Q+P K E ++ C LSKRQR LY ++ + Q E + + +
Sbjct: 435 LRRLQEDHKEVLQLPEKQEIVLSCELSKRQRRLYMEYGNSHQVNEIIE--RRLKAFVGIN 492
Query: 1057 QLRKVCNHPDLF 1068
L +CNHP ++
Sbjct: 493 HLTNICNHPGIY 504
Score = 106 bits (264), Expect = 3e-22
Identities = 55/127 (43%), Positives = 79/127 (61%)
Query: 1327 HRALIFTQMTKVLDILEQFLNFHGYLYMRLDGATKIEDRQILTERFNSDPRITVFILSSR 1386
+R ++FTQ V+ ++E FL G + L GA R + ++F D I VF++++R
Sbjct: 539 NRVILFTQRRTVITMMEYFLAEKGIKCVSLTGADSAAARPKIIKKFEDDVSIKVFLMTTR 598
Query: 1387 SGGLGINLTGADTVIFYDSDWNPAMDKQCQDRCHRIGQTRDVHIYRFVSDHTIESNILKK 1446
+GGLG+NLT A+ VI +D DWNP D Q ++R +R+GQT DV IYR VS+ TIE K
Sbjct: 599 AGGLGLNLTCANKVIIFDPDWNPQADNQAKNRIYRMGQTNDVAIYRLVSNGTIEDLKFFK 658
Query: 1447 ANQKRHL 1453
QK +L
Sbjct: 659 QVQKENL 665
Score = 56.2 bits (134), Expect = 4e-07
Identities = 37/123 (30%), Positives = 59/123 (47%), Gaps = 2/123 (1%)
Query: 1326 GHRALIFTQMTKVLDILEQFLNFHGYLYMRLDGATKIEDRQILTERFNSDPRITVFILSS 1385
G + +IFTQ +V +LE F+ Y A DR+ + F + + + + S
Sbjct: 1407 GAKVVIFTQRRQVAVMLEHFMKQKRIAYCSFLKAKNAYDRENVVNYFENTTDVQILLAPS 1466
Query: 1386 RSGGLGINLTGADTVIFYDSDWNPAMD-KQCQDRCHRIGQTRDVHIYRFVSDHTIE-SNI 1443
LG+ L A+ VI +D +WNP D K ++ + DV + R VS+ T+E S+
Sbjct: 1467 IMFKLGMQLKKANKVIIFDPEWNPDSDVKHTREMSFLTKKVEDVTVVRLVSEGTVEDSSY 1526
Query: 1444 LKK 1446
KK
Sbjct: 1527 FKK 1529
>7296236 [K] KOG0384 Chromodomain-helicase DNA-binding protein
Length = 2237
Score = 136 bits (343), Expect = 2e-31
Identities = 81/212 (38%), Positives = 118/212 (55%), Gaps = 22/212 (10%)
Query: 764 TLRIYQKQGLNWLASLYNNKTNGILADEMGLGKTIQTISLLAYLACEKENWGPHLIVVPT 823
+LR YQ +GLNWL + N N ILADEMGLGKTIQ+++ + + E GP L++ P
Sbjct: 2021 SLRPYQLEGLNWLKFSWYNTHNCILADEMGLGKTIQSLTFV-HSVYEYGIRGPFLVIAPL 2079
Query: 824 SVLLNWEMEFKRFAPGFKVLTYYGSPQQRR-----------EKRKGWNKPDAFHVCITSY 872
S + NW+ EF+ + V+ Y+GS ++ E K +P F+V IT++
Sbjct: 2080 STIPNWQREFEGWTD-MNVVVYHGSVTSKQMIQDYEYYYKTESGKVLKEPIKFNVLITTF 2138
Query: 873 QLVVHDQHSFKRKKWQYMILDEAHNIKNFRSTRWQALLNFNTERRLLLTGTPLQNNLAEL 932
+++V D K W+ ++DEAH +KN + L N E R+LL+GTPLQNN++EL
Sbjct: 2139 EMIVTDYMDLKAFNWRLCVIDEAHRLKNRNCKLLEGLRQLNLEHRVLLSGTPLQNNISEL 2198
Query: 933 WSLLYFLMPQTALENGKVSGFADLDAFQQWFG 964
+SLL FL P S F+ + F FG
Sbjct: 2199 FSLLNFLEP---------SQFSSQEEFMSEFG 2221
>At3g19210 [L] KOG0390 DNA repair protein SNF2 family
Length = 688
Score = 133 bits (335), Expect = 2e-30
Identities = 97/332 (29%), Positives = 167/332 (50%), Gaps = 26/332 (7%)
Query: 752 VSDVPVPSLLRGTLRIYQKQGLNWLASLYNN-----KTNG-ILADEMGLGKTIQTISLLA 805
V+ + V S+L LR +Q++G+ ++ + NG ILAD+MGLGKT+Q+I+LL
Sbjct: 63 VTTIMVHSVLVKFLRPHQREGVQFMFDCVSGLHGSANINGCILADDMGLGKTLQSITLLY 122
Query: 806 YLACEKENWGPH----LIVVPTSVLLNWEMEFKRFAPGFKVLTYYGSPQQRREKRKG--- 858
L C+ + P +IV PTS++ NWE E K++ G ++ R + G
Sbjct: 123 TLLCQGFDGTPMVKKAIIVTPTSLVSNWEAEIKKWV-GDRIQLIALCESTRDDVLSGIDS 181
Query: 859 WNKP-DAFHVCITSYQLV-VHDQHSFKRKKWQYMILDEAHNIKNFRSTRWQALLNFNTER 916
+ +P A V I SY+ +H + + +I DEAH +KN ++ +AL + +R
Sbjct: 182 FTRPRSALQVLIISYETFRMHSSKFCQSESCDLLICDEAHRLKNDQTLTNRALASLTCKR 241
Query: 917 RLLLTGTPLQNNLAELWSLLYFLMPQTALENGKVSGFADLDAFQQWFGRPVDKIVETGEN 976
R+LL+GTP+QN+L E ++++ F P D F+ ++ P+ E
Sbjct: 242 RVLLSGTPMQNDLEEFFAMVNFTNP---------GSLGDAAHFRHYYEAPIICGREPTAT 292
Query: 977 YEQDEETKKTVSKLHQVLRPYLLRRLKADVEKQMPGKYEHIIYCRLSKRQRFLYDDFMSR 1036
E+ ++L + ++LRR A + +P K ++ C+++ Q LY+ F+S
Sbjct: 293 EEEKNLAADRSAELSSKVNQFILRRTNALLSNHLPPKIIEVVCCKMTTLQSTLYNHFISS 352
Query: 1037 AQTKETLA-SGNFMSIINCLMQLRKVCNHPDL 1067
K LA + ++ + L+K+CNHP L
Sbjct: 353 KNLKRALADNAKQTKVLAYITALKKLCNHPKL 384
Score = 103 bits (258), Expect = 2e-21
Identities = 58/158 (36%), Positives = 87/158 (54%), Gaps = 4/158 (2%)
Query: 1328 RALIFTQMTKVLDILEQFLNFHGYLYMRLDGATKIEDRQILTERFNSDPRIT-VFILSSR 1386
R ++ + T+ LD+ Q Y ++RLDG+T I RQ L R N + F+LSS+
Sbjct: 449 RIVLVSNYTQTLDLFAQLCRERRYPFLRLDGSTTISKRQKLVNRLNDPTKDEFAFLLSSK 508
Query: 1387 SGGLGINLTGADTVIFYDSDWNPAMDKQCQDRCHRIGQTRDVHIYRFVSDHTIESNILKK 1446
+GG G+NL GA+ ++ +D DWNPA DKQ R R GQ + V++YRF+S TIE + ++
Sbjct: 509 AGGCGLNLIGANRLVLFDPDWNPANDKQAAARVWRDGQKKRVYVYRFLSTGTIEEKVYQR 568
Query: 1447 ANQKRHLDNVVIQTGDFTTDYFTKLSVKDLLGAEAPED 1484
K L V+ TD T+ + +L A + D
Sbjct: 569 QMSKEGLQKVIQHE---QTDNSTRQVLAGMLYASSIND 603
>HsM14149926 [K] KOG0384 Chromodomain-helicase DNA-binding protein
Length = 757
Score = 132 bits (333), Expect = 3e-30
Identities = 74/170 (43%), Positives = 101/170 (58%), Gaps = 6/170 (3%)
Query: 1326 GHRALIFTQMTKVLDILEQFLNFHGYLYMRLDGATKIEDRQILTERF-NSDPRITVFILS 1384
GH+ LIF+QM + LDILE +L Y Y R+DG + RQ +RF D VF+L
Sbjct: 22 GHKVLIFSQMVRCLDILEDYLIQRRYTYERIDGRVRGNLRQAAIDRFCKPDSDRFVFLLC 81
Query: 1385 SRSGGLGINLTGADTVIFYDSDWNPAMDKQCQDRCHRIGQTRDVHIYRFVSDHTIESNIL 1444
+R+GGLGINLT ADT I +DSDWNP D Q Q RCHRIGQ++ V +YR ++ ++ E +
Sbjct: 82 TRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQSKAVKVYRLITRNSYEREMF 141
Query: 1445 KKANQKRHLDNVVIQT-----GDFTTDYFTKLSVKDLLGAEAPEDIPDDK 1489
KA+ K LD V+Q G +K+ V+DLL A + D++
Sbjct: 142 DKASLKLGLDKAVLQDINRKGGTNGVQQLSKMEVEDLLRKGAYGALMDEE 191
>CE15856 [K] KOG0392 SNF2 family DNA-dependent ATPase domain-containing
protein
Length = 1529
Score = 130 bits (327), Expect = 2e-29
Identities = 90/307 (29%), Positives = 152/307 (49%), Gaps = 31/307 (10%)
Query: 765 LRIYQKQGLNWLASLYNNKTNGILADEMGLGKTIQTISLLAYLACEKENWGPH---LIVV 821
LR YQ +G+ W+ L +GILAD+MGLGKT+QT+ +A E H LIV
Sbjct: 982 LREYQLEGITWIRFLRTYGLHGILADDMGLGKTLQTMCSIALSVDRDEMSEFHRCSLIVC 1041
Query: 822 PTSVLLNWEMEFKRFAPGFKVLTYYGSPQQRREKRKGWNKPDAFHVCITSYQLVVHDQHS 881
P +++ +W +E+ RF P QR K + +C+ +Y +
Sbjct: 1042 PRTLVDHWCLEWNRFFP------------QRVPASKNLTRCHGAEICVIAYDEL--KTAY 1087
Query: 882 FKRKKWQYMILDEAHNIKNFRSTRWQALLNFNTERRLLLTGTPLQNNLAELWSLLYFLMP 941
+ W Y++LDE H ++N + W+ + RL+L+GTP+QN+ A+LWSL +LMP
Sbjct: 1088 MMDRVWNYIVLDEGHVMRNSKLRAWKFASQLVGKSRLILSGTPVQNSPADLWSLFAWLMP 1147
Query: 942 QTALENGKVSGFADLD-AFQQWFGRPVDKIVETGENYEQDEETKKTVSKLHQVLRPYLLR 1000
G+ + F+ F + + K N + +S+LH+++ P+++R
Sbjct: 1148 ----------GYLGSEKQFRSQFLKKIMKCRLPKANEADLKAGSAAISQLHKLVLPFVMR 1197
Query: 1001 RLKADVEKQMPGKYEHIIYCRLSKRQRFLYDDFMSRAQTKETLASGNFMSIINCLMQLRK 1060
RLK +V K++P K C L++ Q+ +Y + R + + +S + L+ LRK
Sbjct: 1198 RLKTEVLKELPEKNVQDYECELTEDQKEIYRFVVDRCTSSQEDVG---LSSLVTLITLRK 1254
Query: 1061 VCNHPDL 1067
+ +H L
Sbjct: 1255 LTDHTKL 1261
Score = 113 bits (282), Expect = 3e-24
Identities = 58/138 (42%), Positives = 81/138 (58%), Gaps = 4/138 (2%)
Query: 1325 NGHRALIFTQMTKVLDILEQFLNFHGY----LYMRLDGATKIEDRQILTERFNSDPRITV 1380
+GHRALIF Q ++ L + ++ LDG+ DR + RFN D I V
Sbjct: 1319 SGHRALIFCQWKTSAKLVSDALKSGEFGSVVSHLVLDGSVPAGDRMKMVNRFNEDKTIDV 1378
Query: 1381 FILSSRSGGLGINLTGADTVIFYDSDWNPAMDKQCQDRCHRIGQTRDVHIYRFVSDHTIE 1440
IL++ GG+G+NLTGADTVIF D DWNP D Q DR HR+GQTR+V++YR ++ T+E
Sbjct: 1379 LILTTHVGGVGLNLTGADTVIFLDHDWNPMKDLQAIDRAHRLGQTRNVNVYRLITQGTVE 1438
Query: 1441 SNILKKANQKRHLDNVVI 1458
++ A K + +I
Sbjct: 1439 EKVMSLAKFKLNTAQALI 1456
>ECU03g1530 [K] KOG0392 SNF2 family DNA-dependent ATPase domain-containing
protein
Length = 1256
Score = 130 bits (326), Expect = 2e-29
Identities = 86/266 (32%), Positives = 137/266 (51%), Gaps = 32/266 (12%)
Query: 765 LRIYQKQGLNWLASLYNNKTNGILADEMGLGKTIQTISLLAYLACEKENWGPHLIVVPTS 824
LR YQ +G+ WL LY+ NGILAD+MGLGKT+Q ++ L + L++ P+S
Sbjct: 797 LRDYQMEGVKWLNFLYSFSLNGILADDMGLGKTLQVLTFLCSEIYKTNR--KVLVICPSS 854
Query: 825 VLLNWEMEFKRFAPGFKVLTYYGSPQQRREKRKGWNKPDAFHVCITSYQLVVHDQHSFKR 884
+ +W+ E K+F P Y +RE R D + + I+SY+ +D +F
Sbjct: 855 LTGHWKSEVKKFFPFVAAEIY------KREDR------DTYSILISSYETFRNDYLNFIE 902
Query: 885 KKWQYMILDEAHNIKNFRSTRWQALLNFNTERRLLLTGTPLQNNLAELWSLLYFLMPQTA 944
K W Y+++DE H ++N ++ + + R+++LTGTP+ N++ +L SL FLMP
Sbjct: 903 KDWFYVVVDEGHVLRNKQTILYSRMNMIRCSRKMVLTGTPVHNSVEDLISLFNFLMPNYI 962
Query: 945 LENGKVSGFADLDAFQQWFGRPVDKIVETGENYEQDEETKKTVSKLHQVLRPYLLRRLKA 1004
G + L+ K+ ++ + E+T K + LH+ + P++LRRLK
Sbjct: 963 ---GPEKEYGSLNV----------KMSDS-----EIEKTHKRLDLLHRKVLPFILRRLKI 1004
Query: 1005 DVEKQMPGKYEHIIYCRLSKRQRFLY 1030
DV K +P K I L Q LY
Sbjct: 1005 DVLKDLPPKIIRDITVELGPVQEKLY 1030
Score = 108 bits (269), Expect = 9e-23
Identities = 59/157 (37%), Positives = 91/157 (57%), Gaps = 9/157 (5%)
Query: 1324 DNGHRALIFTQMTKVLD-ILEQFLNFHGYLYMRLDGATKIEDRQILTERFNSDPRITVFI 1382
D G + LIF Q +D +++ + + + Y RLDG+ R + E FN+ +F
Sbjct: 1099 DLGSKILIFFQFKSTIDLVIKDIMKKYKFKYSRLDGSVPSAARTKIAEEFNTGTTQMLF- 1157
Query: 1383 LSSRSGGLGINLTGADTVIFYDSDWNPAMDKQCQDRCHRIGQTRDVHIYRFVSDHTIESN 1442
L+++ GGLG+NLTGADTV+ Y+ DWNP D Q DR HRIGQ R V+++RF++ +T+E
Sbjct: 1158 LTTQVGGLGLNLTGADTVVMYEHDWNPFNDLQAMDRAHRIGQKRTVNVFRFIARNTLEEK 1217
Query: 1443 ILKKANQKRHLDNVVI--QTGDFTTDYFTKLSVKDLL 1477
++ + K + N ++ Q D T + KDLL
Sbjct: 1218 VMNLQSFKMFVANSLVSQQNADIET-----MDTKDLL 1249
>Hs4506397 [L] KOG0390 DNA repair protein SNF2 family
Length = 747
Score = 129 bits (323), Expect = 5e-29
Identities = 97/329 (29%), Positives = 169/329 (50%), Gaps = 25/329 (7%)
Query: 755 VPVPSLLRGTLRIYQKQGLNWLASLYNNK----TNG-ILADEMGLGKTIQTISLLAYLAC 809
V V +L LR +Q++G+ +L ++ ++G I+ADEMGLGKT+Q I+L+ L
Sbjct: 143 VVVDPILSKVLRPHQREGVKFLWECVTSRRIPGSHGCIMADEMGLGKTLQCITLMWTLLR 202
Query: 810 EKENWGPHL----IVVPTSVLLNWEMEFKRFAPGF--KVLTYYGSPQQRREKRKGWNKPD 863
+ P + +V P+S++ NW E ++ G + GS + +K +G+
Sbjct: 203 QSPECKPEIDKAVVVSPSSLVKNWYNEVGKWLGGRIQPLAIDGGSKDEIDQKLEGFMNQR 262
Query: 864 AFHVC----ITSYQLVVHDQHSFKRKKWQYMILDEAHNIKNFRSTRWQALLNFNTERRLL 919
V I SY+ ++ +I DE H +KN + +QAL + NT RR+L
Sbjct: 263 GARVSSPILIISYETFRLHVGVLQKGSVGLVICDEGHRLKNSENQTYQALDSLNTSRRVL 322
Query: 920 LTGTPLQNNLAELWSLLYFLMPQTALENGKVSGFADLDAFQQWFGRPVDKIVETGENYEQ 979
++GTP+QN+L E +SL++F+ N + G A F++ F P+ K + +
Sbjct: 323 ISGTPIQNDLLEYFSLVHFV-------NSGILGTA--HEFKKHFELPILKGRDAAASEAD 373
Query: 980 DEETKKTVSKLHQVLRPYLLRRLKADVEKQMPGKYEHIIYCRLSKRQRFLYDDFMSRAQT 1039
+ ++ + +L ++ L+RR + K +P K E ++ CRL+ Q LY F+ +A+
Sbjct: 374 RQLGEERLRELTSIVNRCLIRRTSDILSKYLPVKIEQVVCCRLTPLQTELYKRFLRQAKP 433
Query: 1040 KETLASGNF-MSIINCLMQLRKVCNHPDL 1067
E L G +S ++ + L+K+CNHP L
Sbjct: 434 AEELLEGKMSVSSLSSITSLKKLCNHPAL 462
Score = 108 bits (269), Expect = 9e-23
Identities = 56/150 (37%), Positives = 88/150 (58%), Gaps = 1/150 (0%)
Query: 1328 RALIFTQMTKVLDILEQFLNFHGYLYMRLDGATKIEDRQILTERFNSDPRIT-VFILSSR 1386
+ ++ + T+ LD+ E+ YLY+RLDG I+ R + ERFNS VF+LSS+
Sbjct: 515 KVVLVSNYTQTLDLFEKLCRARRYLYVRLDGTMSIKKRAKVVERFNSPSSPDFVFMLSSK 574
Query: 1387 SGGLGINLTGADTVIFYDSDWNPAMDKQCQDRCHRIGQTRDVHIYRFVSDHTIESNILKK 1446
+GG G+NL GA+ ++ +D DWNPA D+Q R R GQ + +IYR +S TIE I ++
Sbjct: 575 AGGCGLNLIGANRLVMFDPDWNPANDEQAMARVWRDGQKKTCYIYRLLSAGTIEEKIFQR 634
Query: 1447 ANQKRHLDNVVIQTGDFTTDYFTKLSVKDL 1476
+ K+ L + V+ +F+ +K+L
Sbjct: 635 QSHKKALSSCVVDEEQDVERHFSLGELKEL 664
>SPAC15A10.03c [L] KOG0390 DNA repair protein SNF2 family
Length = 852
Score = 125 bits (314), Expect = 5e-28
Identities = 98/341 (28%), Positives = 164/341 (47%), Gaps = 31/341 (9%)
Query: 749 PLAVSDVPVPSLLRGTLRIYQKQGLNWLASLYNNK----TNG-ILADEMGLGKTIQTISL 803
P V+ V P L R LR +Q +G+ +L + NG I+ADEMGLGKT+Q I+L
Sbjct: 249 PPPVAVVIDPKLAR-ILRPHQIEGVKFLYKCVTGRIDRCANGCIMADEMGLGKTLQCIAL 307
Query: 804 LAYLACEKENWGPH-----LIVVPTSVLLNWEMEFKRFAPGFKVLTYY-----GSPQQRR 853
L L + G +I P+S++ NW E ++ G +T + S Q+
Sbjct: 308 LWTLLKQSPQAGKPTIEKAIITCPSSLVKNWANELVKWL-GKDAITPFILDGKSSKQELI 366
Query: 854 EKRKGW----NKPDAFHVCITSYQLVVHDQHSFKRKKWQYMILDEAHNIKNFRSTRWQAL 909
+ W + V I SY+ + + ++ DE H +KN S + AL
Sbjct: 367 MALQQWASVHGRQVTRPVLIASYETLRSYVEHLNNAEIGMLLCDEGHRLKNSDSLTFTAL 426
Query: 910 LNFNTERRLLLTGTPLQNNLAELWSLLYFLMPQTALENGKVSGFADLDAFQQWFGRPVDK 969
N +RR++L+GTP+QN+L+E +SLL F P F++ + P+ K
Sbjct: 427 DKLNVQRRVILSGTPIQNDLSEYFSLLNFANPGL---------LGSRQEFRKNYEIPILK 477
Query: 970 IVETGENYEQDEETKKTVSKLHQVLRPYLLRRLKADVEKQMPGKYEHIIYCRLSKRQRFL 1029
+ + E +++L +++ +++RR + K +P KYEH+++C LS+ Q L
Sbjct: 478 GRDADGTEKDKENGDAKLAELAKIVNRFIIRRTNDILSKYLPVKYEHVVFCNLSEFQLSL 537
Query: 1030 YDDFMSRAQTKETLASGNFMSIINCLMQLRKVCNHPDLFEV 1070
Y F++ + + L G + + L+K+CNHPDL +
Sbjct: 538 YKHFITSPEINKIL-RGTGSQPLKAIGLLKKICNHPDLLNL 577
Score = 110 bits (274), Expect = 2e-23
Identities = 55/150 (36%), Positives = 86/150 (56%), Gaps = 1/150 (0%)
Query: 1328 RALIFTQMTKVLDILEQFLNFHGYLYMRLDGATKIEDRQILTERFNSDPRIT-VFILSSR 1386
+ ++ + T LD+ EQ GY +RLDG + RQ L + FN + VF+LSS+
Sbjct: 629 KIVLISNYTSTLDLFEQLCRARGYKALRLDGTMNVNKRQRLVDTFNDPEKDAFVFLLSSK 688
Query: 1387 SGGLGINLTGADTVIFYDSDWNPAMDKQCQDRCHRIGQTRDVHIYRFVSDHTIESNILKK 1446
+GG GINL GA+ +I +D DWNPA D+Q R R GQ +D +YRF++ TIE I ++
Sbjct: 689 AGGCGINLIGANRLILFDPDWNPAADQQALARVWRDGQKKDCFVYRFIATGTIEEKIFQR 748
Query: 1447 ANQKRHLDNVVIQTGDFTTDYFTKLSVKDL 1476
+ K+ L + V+ +F+ +++ L
Sbjct: 749 QSHKQSLSSCVVDEAQDVERHFSLDNLRQL 778
>7295868 [L] KOG0390 DNA repair protein SNF2 family
Length = 784
Score = 125 bits (314), Expect = 5e-28
Identities = 97/337 (28%), Positives = 168/337 (49%), Gaps = 41/337 (12%)
Query: 755 VPVPSLLRGTLRIYQKQGLNWLASLYNNKT---NG-ILADEMGLGKTIQTISLLAYLACE 810
V V LL LR +Q++G+ ++ K NG I+ADEMGLGKT+Q ++L+ L +
Sbjct: 146 VVVDPLLSNILRPHQREGVRFMYECVEGKRGNFNGCIMADEMGLGKTLQCVTLVWTLLRQ 205
Query: 811 KENWGPHL----IVVPTSVLLNWEMEFKRFAPGFKVLTYYGSPQQRREKRKGWNKPDAFH 866
P + +V P+S++ NWE EF ++ G + P + K + F
Sbjct: 206 GPECKPTINKAIVVSPSSLVKNWEKEFTKWLHGRLLCL----PMEGGTKENTIRALEQFS 261
Query: 867 ---------VCITSYQLVVHDQHSFKRKKWQYMILDEAHNIKNFRSTRWQALLNFNTERR 917
V + SY+ + + +I DE H +KN + +QAL+ T+RR
Sbjct: 262 MTSARLGTPVLLISYETFRIYAEILCKYEVGMVICDEGHRLKNSDNLTYQALMGLKTKRR 321
Query: 918 LLLTGTPLQNNLAELWSLLYFLMPQTALENGKVSGFADLDAFQQWFGRPVDKIVETGENY 977
+LL+GTP+QN+L E +SL+ F+ P+ + G A + F R + + G+N
Sbjct: 322 VLLSGTPIQNDLTEYYSLVNFVNPE-------MLGTAAV------FKRNFESAILRGQNT 368
Query: 978 EQ-DEETKKTVSKLHQVL---RPYLLRRLKADVEKQMPGKYEHIIYCRLSKRQRFLYDDF 1033
+ ++E ++ + K +++ ++RR + K +P K+E +I +L+ Q LY +F
Sbjct: 369 DSTEQERQRAIEKTQELIGLVDQCIIRRTNQILTKYLPVKFEMVICAKLTAIQLELYTNF 428
Query: 1034 MSRAQTKETLASGNFMSIINCLMQ---LRKVCNHPDL 1067
+ Q + +LA N + + L L+K+C+HPDL
Sbjct: 429 LKSDQVRRSLADCNEKASLTALADITTLKKICSHPDL 465
Score = 111 bits (278), Expect = 8e-24
Identities = 57/160 (35%), Positives = 92/160 (56%), Gaps = 3/160 (1%)
Query: 1324 DNGHRALIFTQMTKVLDILEQFLNFHGYLYMRLDGATKIEDRQILTERFNSDPRIT--VF 1381
+ + ++ + T+ LD+ EQ Y ++RLDG I+ R + +RFN DP +F
Sbjct: 514 EGNDKVVLISNYTQTLDLFEQLARKRKYGFVRLDGTMSIKKRSKVVDRFN-DPESDSFLF 572
Query: 1382 ILSSRSGGLGINLTGADTVIFYDSDWNPAMDKQCQDRCHRIGQTRDVHIYRFVSDHTIES 1441
+LSS++GG G+NL GA+ + +D DWNPA D+Q R R GQ + +IYR V+ +IE
Sbjct: 573 MLSSKAGGCGLNLIGANRLFMFDPDWNPANDEQAMARVWRDGQKKPCYIYRLVASGSIEE 632
Query: 1442 NILKKANQKRHLDNVVIQTGDFTTDYFTKLSVKDLLGAEA 1481
IL++ K+ L + +I + +FT+ +KDL +A
Sbjct: 633 KILQRQTHKKSLSSTIIDNNESAEKHFTRDDLKDLFTFDA 672
>At5g63950 [KL] KOG0387 Transcription-coupled repair protein CSB/RAD26 (contains
SNF2 family DNA-dependent ATPase domain)
Length = 1053
Score = 124 bits (312), Expect = 9e-28
Identities = 102/340 (30%), Positives = 161/340 (47%), Gaps = 60/340 (17%)
Query: 757 VPSLLRGTLRIYQKQGLNWLASLYNNKTNGILADEMGLGKTIQTISLLAYLACEKENWGP 816
+P + L +Q++GLNWL SL+ GIL D+MGLGKT+Q S LA L K
Sbjct: 369 LPGKIATMLYPHQREGLNWLWSLHTQGKGGILGDDMGLGKTMQICSFLAGLFHSKLIKRA 428
Query: 817 HLIVVPTSVLLNWEMEFKRFAPGFKVLTYYGSPQQRREKRKGWNKPDAFHVC------IT 870
L+V P ++L +W E YYG+ + RE D H+ +T
Sbjct: 429 -LVVAPKTLLPHWMKELATVGLSQMTREYYGTSTKAREY-------DLHHILQGKGILLT 480
Query: 871 SYQLVVH------------DQHSFKRKKWQYMILDEAHNIKNFRSTRWQALLNFNTERRL 918
+Y +V + D+ KW YMILDE H IKN + R ++LL + R+
Sbjct: 481 TYDIVRNNTKALQGDDHYTDEDDEDGNKWDYMILDEGHLIKNPNTQRAKSLLEIPSSHRI 540
Query: 919 LLTGTPLQNNLAELWSLLYFLMPQTALENGKVSGFADLDAFQQWFGRPVDKIVETGENYE 978
+++GTP+QNNL +L + Q ++ + R DK +
Sbjct: 541 IISGTPIQNNLK---ALSFNRFKQN---------------YEHYILRGTDK-----NATD 577
Query: 979 QDEETKKTVSK-LHQVLRPYLLRRLKADV------EKQMPGKYEHIIYCRLSKRQRFLYD 1031
+++ TV+K L + ++P+ LRRLK++V ++ K E +++ RL+ QR LY+
Sbjct: 578 REQRIGSTVAKNLREHIQPFFLRRLKSEVFGDDGATSKLSKKDEIVVWLRLTACQRQLYE 637
Query: 1032 DFMSRAQTKETLASGNFMSIINCLMQLRKVCNHPDLFEVR 1071
F++ E + S S + L L+K+C+HP L R
Sbjct: 638 AFLN----SEIVLSAFDGSPLAALTILKKICDHPLLLTKR 673
Score = 98.6 bits (244), Expect = 7e-20
Identities = 53/146 (36%), Positives = 84/146 (57%), Gaps = 2/146 (1%)
Query: 1331 IFTQMTKVLDILEQFLNFHGYLYMRLDGATKIEDRQILTERFNSDPRITVFILSSRSGGL 1390
I +++ ++ +L+ L +GY ++R+DG TK DR E F +F+L+S+ GGL
Sbjct: 717 ISCKLSFIMSLLDS-LTSNGYSFLRIDGTTKAPDRLKTVEEFQEGHVAPIFLLTSQVGGL 775
Query: 1391 GINLTGADTVIFYDSDWNPAMDKQCQDRCHRIGQTRDVHIYRFVSDHTIESNILKKANQK 1450
G+ LT AD VI D WNP+ D Q DR +RIGQT+DV +YR ++ T+E I +K K
Sbjct: 776 GLTLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQTKDVIVYRLMTSATVEEKIYRKQVYK 835
Query: 1451 RHLDNVVIQTGDFTTDYFTKLSVKDL 1476
L + + YF++ +++L
Sbjct: 836 GGLFKTATEHKE-QIRYFSQQDLREL 860
>At4g31900 [R] KOG0383 Predicted helicase
Length = 1067
Score = 120 bits (301), Expect = 2e-26
Identities = 59/136 (43%), Positives = 84/136 (61%), Gaps = 1/136 (0%)
Query: 1324 DNGHRALIFTQMTKVLDILEQFLNFHGYLYMRLDGATKIEDRQILTERFNSD-PRITVFI 1382
+ GHR LI+TQ L +LE + F + Y R+DG +RQ+ +RFN++ F+
Sbjct: 428 EQGHRVLIYTQFQHTLYLLEDYFTFKNWNYERIDGKISGPERQVRIDRFNAENSNRFCFL 487
Query: 1383 LSSRSGGLGINLTGADTVIFYDSDWNPAMDKQCQDRCHRIGQTRDVHIYRFVSDHTIESN 1442
LS+R+GG+GINL ADTVI YDSDWNP D Q R HR+GQT V IYR + T+E
Sbjct: 488 LSTRAGGIGINLATADTVIIYDSDWNPHADLQAMARVHRLGQTNKVMIYRLIHKGTVEER 547
Query: 1443 ILKKANQKRHLDNVVI 1458
+++ K L+++V+
Sbjct: 548 MMEITKNKMLLEHLVV 563
Score = 96.3 bits (238), Expect = 3e-19
Identities = 50/95 (52%), Positives = 62/95 (64%), Gaps = 2/95 (2%)
Query: 758 PSLLRGTLRIYQKQGLNWLASLYNNKTNGILADEMGLGKTIQTISLLAYLACEKENWGPH 817
P L GTL YQ +GLN+L ++ KTN ILADEMGLGKTIQ+I+ LA L +EN PH
Sbjct: 218 PEFLTGTLHTYQLEGLNFLRYSWSKKTNVILADEMGLGKTIQSIAFLASLF--EENLSPH 275
Query: 818 LIVVPTSVLLNWEMEFKRFAPGFKVLTYYGSPQQR 852
L+V P S + NWE EF +AP V+ Y G + R
Sbjct: 276 LVVAPLSTIRNWEREFATWAPHMNVVMYTGDSEAR 310
>At3g16600 [KL] KOG1001 Helicase-like transcription factor HLTF/DNA helicase
RAD5 DEAD-box superfamily
Length = 638
Score = 117 bits (294), Expect = 1e-25
Identities = 108/389 (27%), Positives = 164/389 (41%), Gaps = 90/389 (23%)
Query: 726 SDNELKDEKAETTESVTSPAAAD----PLAVSDVPVPSLLRGTLRIYQKQGLNWLASLYN 781
SD E+++EK E V AA P D+P P +L L +QK LNW+
Sbjct: 11 SDEEVQEEKTTVNERVIYQAALQDLKQPKTEKDLP-PGVLTVPLMRHQKIALNWMRKKEK 69
Query: 782 NKTN---GILADEMGLGKTIQTISLLAYLACEKE---------NWGPHLIVVPTSVLLNW 829
+ GILAD+ GLGKTI TISL+ + + N G LIV P SV+ W
Sbjct: 70 RSRHCLGGILADDQGLGKTISTISLILLQKLKSQSKQRKRKGQNSGGTLIVCPASVVKQW 129
Query: 830 EMEFKRFAPG---FKVLTYYGSPQQRREKRKGWNKPDAFHVCITSYQLVVHDQH------ 880
E K VL ++GS + K + + V +T+Y +V ++
Sbjct: 130 AREVKEKVSDEHKLSVLVHHGS-----HRTKDPTEIAIYDVVMTTYAIVTNEVPQNPMLN 184
Query: 881 ----------------------SFKRKKWQYMILDEAHNIKNFRSTRWQALLNFNTERRL 918
+ R +W ++LDEAH IKN R+ +A + +RR
Sbjct: 185 RYDSMRGRESLDGSSLIQPHVGALGRVRWLRVVLDEAHTIKNHRTLIAKACFSLRAKRRW 244
Query: 919 LLTGTPLQNNLAELWSLLYFLMPQTALENGKVSGFADLDAFQQWFGRPVDKIVETGENYE 978
LTGTP++N + +L+S FL + +A ++F Q P+DK G
Sbjct: 245 CLTGTPIKNKVDDLYSYFRFL---------RYHPYAMCNSFHQRIKAPIDKKPLHG---- 291
Query: 979 QDEETKKTVSKLHQVLRPYLLRRLKADVEKQMPGKYEHIIYCRLSKRQRFLYDDFMSRAQ 1038
KL +LR +LRR K E Y +L R+ ++++ +
Sbjct: 292 --------YKKLQAILRGIMLRRTK-----------EWSFYRKLELNSRWKFEEYAADGT 332
Query: 1039 TKETLASGNFMSIINCLMQLRKVCNHPDL 1067
E +A ++ L++LR+ CNHP L
Sbjct: 333 LHEHMA-----YLLVMLLRLRQACNHPQL 356
Score = 64.3 bits (155), Expect = 1e-09
Identities = 30/76 (39%), Positives = 44/76 (57%)
Query: 1378 ITVFILSSRSGGLGINLTGADTVIFYDSDWNPAMDKQCQDRCHRIGQTRDVHIYRFVSDH 1437
+ ++S ++G LG+N+ A VI D WNP + Q DR HRIGQTR V + R +
Sbjct: 507 VCAMLMSLKAGNLGLNMVAASHVILLDLWWNPTTEDQAIDRAHRIGQTRAVTVTRIAIKN 566
Query: 1438 TIESNILKKANQKRHL 1453
T+E IL +KR++
Sbjct: 567 TVEERILTLHERKRNI 582
>At5g43530 [KL] KOG1001 Helicase-like transcription factor HLTF/DNA helicase
RAD5 DEAD-box superfamily
Length = 1277
Score = 117 bits (292), Expect = 2e-25
Identities = 121/458 (26%), Positives = 185/458 (39%), Gaps = 124/458 (27%)
Query: 731 KDEKAETTESVTSPA--AADPLAVSDVPVPSLLRGTLRIYQKQGLNWLA----------- 777
KDE+ E ES + AAD + ++ PS L LR YQKQ L W++
Sbjct: 581 KDEE-EAPESYMNRVVGAADSYNLEEMEAPSTLTCNLRPYQKQALYWMSESEKGIDVEKA 639
Query: 778 -------------------SLYNN----------------KTNGILADEMGLGKTIQTIS 802
S+Y N GILAD MGLGKT+ TI+
Sbjct: 640 AETLHPCWEAYRICDERAPSIYLNIFSGEATIQFPTATQMARGGILADAMGLGKTVMTIA 699
Query: 803 LL----------------AYLACEKENW-------------GPHLIVVPTSVLLNW--EM 831
L+ A + +K N G LI+ P ++L W E+
Sbjct: 700 LILARPGRGNPENEDVLVADVNADKRNRKEIHMALTTVKAKGGTLIICPMALLSQWKDEL 759
Query: 832 EFKRFAPGFKVLTYYGSPQQRREKRKGWNKPDAFHVCITSYQLVVHDQHS------FKRK 885
E VL YYG + K + V +T+Y ++ F R
Sbjct: 760 ETHSKPDTVSVLVYYGGDRTHDAKAIA-----SHDVVLTTYGVLTSAYKQDMANSIFHRI 814
Query: 886 KWQYMILDEAHNIKNFRSTRWQALLNFNTERRLLLTGTPLQNNLAELWSLLYFLMPQTAL 945
W ++LDEAH IK++++ +A ++ R LTGTPLQN L +L+SLL FL +
Sbjct: 815 DWYRIVLDEAHTIKSWKTQAAKATFELSSHCRWCLTGTPLQNKLEDLYSLLCFLHVEPWC 874
Query: 946 ENGKVSGFADLDAFQQWFGRPVDKIVETGENYEQDEETKKTVSKLHQVLRPYLLRRLKAD 1005
W+ + + K E G+ + + + +LRP +LRR K
Sbjct: 875 N-------------WAWWSKLIQKPYENGD--------PRGLKLIKAILRPLMLRRTKET 913
Query: 1006 VEK------QMPGKYEHIIYCRLSKRQRFLYDDFM--SRAQTKETLASG----NFMSIIN 1053
+K ++P +I C S+ +R Y S+ Q + +A G N+ +I+
Sbjct: 914 RDKEGSLILELPPTDVQVIECEQSEAERDFYTALFKRSKVQFDQFVAQGKVLHNYANILE 973
Query: 1054 CLMQLRKVCNHPDLFEVRPILTSFCIEDSVSKSYCDLN 1091
L++LR+ CNHP L R + DS+++ + D N
Sbjct: 974 LLLRLRQCCNHPFLVMSRADSQQYADLDSLARRFLDNN 1011
Score = 96.7 bits (239), Expect = 3e-19
Identities = 45/129 (34%), Positives = 79/129 (60%)
Query: 1325 NGHRALIFTQMTKVLDILEQFLNFHGYLYMRLDGATKIEDRQILTERFNSDPRITVFILS 1384
+G ++++F+Q T LD+LE L G+ ++R DG + R+ + + FN + T+ ++S
Sbjct: 1126 SGEKSIVFSQWTSFLDLLEIPLRRRGFEFLRFDGKLAQKGREKVLKEFNETKQKTILLMS 1185
Query: 1385 SRSGGLGINLTGADTVIFYDSDWNPAMDKQCQDRCHRIGQTRDVHIYRFVSDHTIESNIL 1444
++GG+G+NLT A +V D WNPA+++Q R HRIGQ R V + RF+ T+E +
Sbjct: 1186 LKAGGVGLNLTAASSVFLMDPWWNPAVEEQAIMRIHRIGQKRTVFVRRFIVKDTVEERMQ 1245
Query: 1445 KKANQKRHL 1453
+ +K+ +
Sbjct: 1246 QVQARKQRM 1254
>At5g22750 [KL] KOG1001 Helicase-like transcription factor HLTF/DNA helicase
RAD5 DEAD-box superfamily
Length = 1029
Score = 115 bits (287), Expect = 7e-25
Identities = 109/370 (29%), Positives = 160/370 (42%), Gaps = 94/370 (25%)
Query: 786 GILADEMGLGKTIQTISLLA--------------------------------------YL 807
GILAD MGLGKT+ TISLL +L
Sbjct: 415 GILADAMGLGKTVMTISLLLAHSWKAASTGFLCPNYEGDKVISSSVDDLTSPPVKATKFL 474
Query: 808 ACEKE--------NWGPHLIVVPTSVLLNWEMEFKRFA-PG-FKVLTYYGSPQQRREKRK 857
+K G +LIV P ++L W+ E + A PG V +YG Q R + K
Sbjct: 475 GFDKRLLEQKSVLQNGGNLIVCPMTLLGQWKTEIEMHAKPGSLSVYVHYG--QSRPKDAK 532
Query: 858 GWNKPDAFHVCITSYQLVVH--------DQHSFKRKKWQYMILDEAHNIKNFRSTRWQAL 909
++ D V IT+Y ++ D +W ++LDEAH IKN +S A
Sbjct: 533 LLSQSD---VVITTYGVLTSEFSQENSADHEGIYAVRWFRIVLDEAHTIKNSKSQISLAA 589
Query: 910 LNFNTERRLLLTGTPLQNNLAELWSLLYFLMPQTALENGKVSGFADLDAFQQWFGRPVDK 969
+RR LTGTP+QNNL +L+SLL FL + W+ + V K
Sbjct: 590 AALVADRRWCLTGTPIQNNLEDLYSLLRFLRIEPW-------------GTWAWWNKLVQK 636
Query: 970 IVETGENYEQDEETKKTVSKLHQVLRPYLLRRLKADVEKQ------MPGKYEHIIYCRLS 1023
E G DE K V +L+P +LRR K+ +++ +P +IYC LS
Sbjct: 637 PFEEG-----DERGLKLV---QSILKPIMLRRTKSSTDREGRPILVLPPADARVIYCELS 688
Query: 1024 KRQRFLYDDFMSRAQTK--ETLASG----NFMSIINCLMQLRKVCNHPDLFEVRPILTSF 1077
+ +R YD R++ K + + G N+ SI+ L++LR+ C+HP L R +
Sbjct: 689 ESERDFYDALFKRSKVKFDQFVEQGKVLHNYASILELLLRLRQCCDHPFLVMSRGDTAEY 748
Query: 1078 CIEDSVSKSY 1087
+ +SK +
Sbjct: 749 SDLNKLSKRF 758
Score = 96.3 bits (238), Expect = 3e-19
Identities = 45/119 (37%), Positives = 76/119 (63%)
Query: 1325 NGHRALIFTQMTKVLDILEQFLNFHGYLYMRLDGATKIEDRQILTERFNSDPRITVFILS 1384
+G ++++F+Q T LD+L+ L+ + + ++RLDG + R+ + + F+ D I V ++S
Sbjct: 878 SGSKSILFSQWTAFLDLLQIPLSRNNFSFVRLDGTLSQQQREKVLKEFSEDGSILVLLMS 937
Query: 1385 SRSGGLGINLTGADTVIFYDSDWNPAMDKQCQDRCHRIGQTRDVHIYRFVSDHTIESNI 1443
++GG+GINLT A D WNPA+++Q R HRIGQT++V I RF+ T+E +
Sbjct: 938 LKAGGVGINLTAASNAFVMDPWWNPAVEEQAVMRIHRIGQTKEVKIRRFIVKGTVEERM 996
>YOR191w [KL] KOG1001 Helicase-like transcription factor HLTF/DNA helicase
RAD5 DEAD-box superfamily
Length = 1619
Score = 114 bits (284), Expect = 2e-24
Identities = 129/543 (23%), Positives = 221/543 (39%), Gaps = 90/543 (16%)
Query: 733 EKAETTESVTSPAAADPLAVSDVPVPSLLRGTLRIYQKQGLNWLASLYNN-KTNGILADE 791
E + +ES+ A P D+ V +LL+ +Q+ GL+WL + N+ K G+LAD+
Sbjct: 920 ENVKQSESIIDGEALTP---EDMTV-NLLK-----HQRLGLHWLLQVENSAKKGGLLADD 970
Query: 792 MGLGKTIQTISLLAYLACEKENWGPHLIVVPTSVLLNWEMEFKRFAPGFKVLTYYGSPQQ 851
MGLGKTIQ I+L+ E+ +LIV P SVL W+ E + T +
Sbjct: 971 MGLGKTIQAIALMLANRSEESKCKTNLIVAPVSVLRVWKGELETKVKKRAKFTTFIFGGS 1030
Query: 852 RREKRKGWNKPDAFHVCITSYQLVVHDQHSFKRKK------------------------- 886
K K W + + SYQ + ++ KK
Sbjct: 1031 GNGKVKHWRDLARYDAVLVSYQTLANEFKKHWPKKLDGEQNQLPAVPHIQALNRLKTSNE 1090
Query: 887 -----------WQYMILDEAHNIKNFRSTRWQALLNFNTERRLLLTGTPLQNNLAELWSL 935
+ ++LDE NIKN + +A N R +L+GTP+QN++ EL+SL
Sbjct: 1091 YYSPFFCNDSTFYRILLDEGQNIKNKNTRASKACCTINGMYRWVLSGTPIQNSMDELYSL 1150
Query: 936 LYFLMPQTALENGKVSGFADLDAFQQWFGRPVDKIVETGENYEQD-EETKKTVSKLHQVL 994
+ FL ++ + +Q F + + + + Y+ D E+ K + K+ +L
Sbjct: 1151 IRFL---------RIPPYHK----EQRFKLDIGRFFQRNKQYQYDNEDRKNALRKVRVLL 1197
Query: 995 RPYLLRRLKADVEK-----QMPGKYEHIIYCRLSKRQRFLYDDFMSRAQ--TKETL---A 1044
+LRR KAD ++P K + RL + Y S+ Q K+ L
Sbjct: 1198 NAIMLRRSKADKIDGKPLLELPPKIVEVDESRLKGEELKFYTALESKNQALAKKLLNNST 1257
Query: 1045 SGNFMSIINCLMQLRKVCNHPDLF---EVRPILTSFCIEDSVSKSYCDLNNYVYNRLHEN 1101
G++ S++ L++LR+ C H +L E + T S + L + + E
Sbjct: 1258 RGSYSSVLTLLLRLRQACCHSELVVMGEKKAEGTKVANGKSFEDDWLRLYYKITHMSGEA 1317
Query: 1102 QFETSVDLSNLNF-----QFTSNDKTLSTNHSEKISELQCVQPILKEISRLKQLNENDS- 1155
Q + ++++ Q ++ T I + C++P ++E S L Q +
Sbjct: 1318 QAQVITSMNSMTCFWCMEQLEPEAMSVLTGCGHLICD-TCIEPFIEESSMLPQAKKTKGG 1376
Query: 1156 --PVTQPDFQDLNQYYSYAKHNKINEIIGQ--------LEHLNYMNNLRCNRRPMYGSNI 1205
+ D Q L H +++I Q E+L+ M + ++ +Y N
Sbjct: 1377 AFAIPCKDCQRLTNEKDIVSHKLYDQVINQGFTEEDLHAEYLSEMEKQKIQQKNVYVPNF 1436
Query: 1206 VKL 1208
L
Sbjct: 1437 ESL 1439
Score = 84.7 bits (208), Expect = 1e-15
Identities = 41/135 (30%), Positives = 75/135 (55%), Gaps = 1/135 (0%)
Query: 1328 RALIFTQMTKVLDILEQFL-NFHGYLYMRLDGATKIEDRQILTERFNSDPRITVFILSSR 1386
+ +IF+Q T +ILE FL N + Y++ G+ + R + F DP + ++S +
Sbjct: 1463 KIIIFSQFTTFFEILEHFLKNKLNFPYLKYIGSMNAQRRSDVINEFYRDPEKRILLISMK 1522
Query: 1387 SGGLGINLTGADTVIFYDSDWNPAMDKQCQDRCHRIGQTRDVHIYRFVSDHTIESNILKK 1446
+G G+ LT A+ V+ D WNP +++Q QDRC+RI QT+ V +++ ++E I +
Sbjct: 1523 AGNSGLTLTCANHVVIVDPFWNPYVEEQAQDRCYRISQTKKVQVHKLFIKDSVEDRISEL 1582
Query: 1447 ANQKRHLDNVVIQTG 1461
+K+ + + + G
Sbjct: 1583 QKRKKEMVDSAMDPG 1597
>YBR073w [L] KOG0390 DNA repair protein SNF2 family
Length = 958
Score = 112 bits (281), Expect = 4e-24
Identities = 84/326 (25%), Positives = 157/326 (47%), Gaps = 36/326 (11%)
Query: 787 ILADEMGLGKTIQTISLL----------AYLACEKEN------WGPHLIVVPTSVLLNWE 830
+LAD+MGLGKT+ +I+L+ + ++C + L+V P +++ NW+
Sbjct: 343 LLADDMGLGKTLMSITLIWTLIRQTPFASKVSCSQSGIPLTGLCKKILVVCPVTLIGNWK 402
Query: 831 MEFKRFAP----GFKVLTYYGSPQQRREKRKGWNKPD-AFHVCITSYQLVVHDQHSFKRK 885
EF ++ G L+ SP + + + K + V I Y+ ++ ++
Sbjct: 403 REFGKWLNLSRIGVLTLSSRNSPDMDKMAVRNFLKVQRTYQVLIIGYEKLLSVSEELEKN 462
Query: 886 KW--QYMILDEAHNIKNFRSTRWQALLNFNTERRLLLTGTPLQNNLAELWSLLYFLMPQT 943
K ++ DE H +KN S L + + R+LLLTGTP+QN+L E ++++ F+ P
Sbjct: 463 KHLIDMLVCDEGHRLKNGASKILNTLKSLDIRRKLLLTGTPIQNDLNEFFTIIDFINP-- 520
Query: 944 ALENGKVSGFADLDAFQQWFGRPVDKIVETGENYEQD--EETKKTVSKLHQVLRPYLLRR 1001
G + FA +F++ F P+ + +T Y ++ E+ ++ ++ ++ + ++LRR
Sbjct: 521 ----GILGSFA---SFKRRFIIPITRARDTANRYNEELLEKGEERSKEMIEITKRFILRR 573
Query: 1002 LKADVEKQMPGKYEHIIYCRLSKRQRFLYDDFMSRAQTKETLASGNFMSIINCLMQLRKV 1061
A +EK +P K + I++C+ +Q + D + A+ F S + + L+KV
Sbjct: 574 TNAILEKYLPPKTDIILFCKPYSQQILAFKDILQGARL--DFGQLTFSSSLGLITLLKKV 631
Query: 1062 CNHPDLFEVRPILTSFCIEDSVSKSY 1087
CN P L P S + SY
Sbjct: 632 CNSPGLVGSDPYYKSHIKDTQSQDSY 657
Score = 107 bits (266), Expect = 2e-22
Identities = 55/155 (35%), Positives = 85/155 (54%), Gaps = 6/155 (3%)
Query: 1328 RALIFTQMTKVLDILEQFLNFHGYLYMRLDGATKIEDRQILTERFNSDPRITVFILSSRS 1387
+ ++ + T+ LDI+E +N G + RLDG+ + R + FN +P I F+LS++S
Sbjct: 683 KVVVVSNYTQTLDIIENLMNMAGMSHCRLDGSIPAKQRDSIVTSFNRNPAIFGFLLSAKS 742
Query: 1388 GGLGINLTGADTVIFYDSDWNPAMDKQCQDRCHRIGQTRDVHIYRFVSDHTIESNILKKA 1447
GG+G+NL G +I +D+DWNP++D Q R HR GQ + IYR V+ I+ IL++
Sbjct: 743 GGVGLNLVGRSRLILFDNDWNPSVDLQAMSRIHRDGQKKPCFIYRLVTTGCIDEKILQRQ 802
Query: 1448 NQKRHL------DNVVIQTGDFTTDYFTKLSVKDL 1476
K L D+ + D F K +KDL
Sbjct: 803 LMKNSLSQKFLGDSEMRNKESSNDDLFNKEDLKDL 837
>CE25143 [L] KOG0390 DNA repair protein SNF2 family
Length = 818
Score = 112 bits (281), Expect = 4e-24
Identities = 90/294 (30%), Positives = 144/294 (48%), Gaps = 23/294 (7%)
Query: 787 ILADEMGLGKTIQTISLLAYLACEKENWGP----HLIVVPTSVLLNWEMEFKRFAPGFKV 842
I+ADEMGLGKT+Q ISLL L + + P +IV P+S++ NW+ E K++ G ++
Sbjct: 229 IMADEMGLGKTLQCISLLWTLLRQSPDACPTVSKSIIVCPSSLVKNWDKEIKKWL-GTRL 287
Query: 843 LTYYGSPQQRREKRKGWNK-------PDAFHVCITSYQLVVHDQHSFKRKKWQYMILDEA 895
+R + N A V I SY+ + +I DE
Sbjct: 288 NAMPVDSGKREQIIACLNSFMADSKMRCAIPVLIISYETFRLYANILHSGDVGIVICDEG 347
Query: 896 HNIKNFRSTRWQALLNFNTERRLLLTGTPLQNNLAELWSLLYFLMPQTALENGKVSGFAD 955
H +KN + +QAL RR+L++GTP+QN+L E +SL+ F+ P G S F
Sbjct: 348 HRLKNSENLTYQALSGLKCARRVLISGTPIQNDLLEYFSLVNFVNPGLL---GTASEFR- 403
Query: 956 LDAFQQWFGRPVDKIVETGENYEQDEETKKTVSKLHQVLRPYLLRRLKADVEKQMPGKYE 1015
F+ + D + + + +E+TK+ +S ++ ++RR A + K +P KYE
Sbjct: 404 -KKFENAILKGRDADASSEDQKKGEEKTKEMIS----LVEKCIIRRTSALLTKYLPVKYE 458
Query: 1016 HIIYCRLSKRQRFLYDDFMSRAQTKETLA--SGNFMSIINCLMQLRKVCNHPDL 1067
HII C+ S Q LY+ + + + G S ++ + L+K+CNHP L
Sbjct: 459 HIICCKNSTLQETLYNKLIECEKQNRIVEKDKGATASALSFITHLKKLCNHPYL 512
Score = 100 bits (250), Expect = 1e-20
Identities = 50/154 (32%), Positives = 88/154 (56%), Gaps = 3/154 (1%)
Query: 1330 LIFTQMTKVLDILEQFLNFHGYLYMRLDGATKIEDRQILTERFNSDPRITVF--ILSSRS 1387
++ + T+ +D + GY ++RLDG+ I+ R + + FN DP T+F +LSS++
Sbjct: 568 VLVSNYTQTIDQFMELCKLRGYDFVRLDGSMSIKQRSKIVDTFN-DPASTIFCFLLSSKA 626
Query: 1388 GGLGINLTGADTVIFYDSDWNPAMDKQCQDRCHRIGQTRDVHIYRFVSDHTIESNILKKA 1447
GG G+NL GA+ ++ +D DWNPA D Q R R GQ + IYR ++ +IE + ++
Sbjct: 627 GGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKMCFIYRLLATGSIEEKMFQRQ 686
Query: 1448 NQKRHLDNVVIQTGDFTTDYFTKLSVKDLLGAEA 1481
K+ L + V+ G+ +F+ +++L E+
Sbjct: 687 THKKALSSCVVDAGEDVARHFSSEQLRELFKLES 720
>Hs4757978 [K] KOG0385 Chromatin remodeling complex WSTF-ISWI small subunit
Length = 220
Score = 112 bits (279), Expect = 6e-24
Identities = 63/170 (37%), Positives = 90/170 (52%)
Query: 772 GLNWLASLYNNKTNGILADEMGLGKTIQTISLLAYLACEKENWGPHLIVVPTSVLLNWEM 831
G NWLA ++ + IL DEMGLGKT QTI+L YLA + GP LI+ P E
Sbjct: 15 GSNWLAQRFHCQNGCILGDEMGLGKTCQTIALFIYLAGRLNDEGPFLILCPYVCFEQLER 74
Query: 832 EFKRFAPGFKVLTYYGSPQQRREKRKGWNKPDAFHVCITSYQLVVHDQHSFKRKKWQYMI 891
+ ++R ++ + FHV +T+Y++ + D K W ++
Sbjct: 75 RNAEICSRSFLCNICSDKEERACLQQDLKQESRFHVLLTTYEICLKDASFLKSFPWSVLV 134
Query: 892 LDEAHNIKNFRSTRWQALLNFNTERRLLLTGTPLQNNLAELWSLLYFLMP 941
+DEAH +KN S + L F+ LLLTGTP+QN+L EL+SLL F+ P
Sbjct: 135 VDEAHRLKNQSSLLHKTLSEFSVVFSLLLTGTPIQNSLQELYSLLSFVEP 184
>SPBC23E6.02 [KL] KOG1001 Helicase-like transcription factor HLTF/DNA helicase
RAD5 DEAD-box superfamily
Length = 1040
Score = 110 bits (275), Expect = 2e-23
Identities = 133/532 (25%), Positives = 226/532 (42%), Gaps = 81/532 (15%)
Query: 758 PSLLRGTLRIYQKQGLNWLASLY-NNKTNGILADEMGLGKTIQTISLLAYLACEKENWGP 816
P+ L TL +QK+GL WL L ++K GILAD+MGLGKT+Q ++LL E ++
Sbjct: 383 PAGLIPTLMEHQKEGLMWLKRLEESSKKGGILADDMGLGKTVQALALLVTRPPESKSVKT 442
Query: 817 HLIVVPTSVLLNWEME-FKRFAPGFK--VLTYYGSPQQRREKRKGWNKPDAFHVCITSYQ 873
LI+ P S+L W E + AP + V ++GS +K K + ++ + +T+Y
Sbjct: 443 TLIITPVSLLQQWHNEILTKIAPSHRPTVYIHHGS----SKKHKIAEQLMSYDIVLTTYN 498
Query: 874 LVVHD--------------------QH-SFKRKKWQYMILDEAHNIKNFRSTRWQALLNF 912
++ ++ +H F +W +ILDEA IKN + +
Sbjct: 499 VIAYEFKNKMAYDKSIEDNAPIKKFEHLPFFEAEWYRVILDEAQTIKNRNTLAARGCCLL 558
Query: 913 NTERRLLLTGTPLQNNLAELWSLLYFLMPQTALENGKVSGFADLDAFQQWFGRPVDKIVE 972
+ R L+GTP+QN + E +SL+ FL ++ ++D +F + F P+ +
Sbjct: 559 ESTYRWCLSGTPMQNGVEEFYSLIKFL---------RIKPYSDWSSFSKDFTIPLSSNI- 608
Query: 973 TGENYEQDEETKKTVSKLHQVLRPYLLRRLK-ADVEKQ----MPGKYEHIIYCRLSKRQR 1027
T + + +L+ LLRR K ++ + +P K LS +
Sbjct: 609 ---------NTSAPMKRFRGLLKAVLLRRTKNTKIDGKPILTLPPKTAVKSETDLSSSEM 659
Query: 1028 FLYDDFMSRAQ------TKETLASGNFMSIINCLMQLRKVCNHPDLFEVRPILTSFCIED 1081
Y+ S AQ +E + ++ S++ L++LR+ C HP L R ++D
Sbjct: 660 EFYNTLQSGAQIQMRKYLQEGTITTHYGSLLVLLLRLRQACCHPWLIVAR----EAAVDD 715
Query: 1082 SVSKSYCDLNNYVYNRLHENQFETSVDLSNLNFQFTSNDKTLSTNHSEKISELQCVQPIL 1141
+ S+ N +YN+++ + L D C + +
Sbjct: 716 --NDSFQAKNRAIYNQIYPEAVNRLKLIETLQCSLCM-DVVAELLIIVPCGHFLCRECLT 772
Query: 1142 KEISRLKQL-----NENDSPVTQ--PDFQDLNQYYSYAKHNKINEIIGQLEHLNYMNNLR 1194
I+ + + NEN SP ++ D + SYA + + G ++ N LR
Sbjct: 773 HVITSSEDMAKQTSNENISPKCSVCEEYIDTERLLSYALFRRYS---GMAPIVDADNKLR 829
Query: 1195 CNR----RPMYGSNIVKLLTVGPKKFIDCELTQESIKPLETRLLEGKETIEK 1242
P SNI++ +G K F D + S K +E L KE I+K
Sbjct: 830 TENISELLPKQYSNILENRQMGMKIFTDPKHWTTSTK-IEKALNAVKEIIKK 880
Score = 90.5 bits (223), Expect = 2e-17
Identities = 49/149 (32%), Positives = 81/149 (53%), Gaps = 2/149 (1%)
Query: 1328 RALIFTQMTKVLDILEQFLNFHGYLYMRLDGATKIEDRQILTERFNSDPRITVFILSSRS 1387
+ LIF+Q L++ G Y+ G +R F DP + V ++S ++
Sbjct: 885 KILIFSQFVSFLELFTVPFRQEGIKYLMYTGGLSTAERNQALINFEVDPNVRVLLISLKA 944
Query: 1388 GGLGINLTGADTVIFYDSDWNPAMDKQCQDRCHRIGQTRDVHIYRFVSDHTIESNILKKA 1447
G +G+NLT A+ VI D WNP +++Q DR HRIGQ + V+I R V+++TIE +L
Sbjct: 945 GNVGLNLTCANHVIILDPFWNPYIEEQAVDRAHRIGQDKPVNILRIVTNNTIEERVLALQ 1004
Query: 1448 NQKRHLDNVVIQTGDFTTDYFTKLSVKDL 1476
++KR L + + G+ ++L+ K+L
Sbjct: 1005 DRKRELIDSAL--GEKGLREISRLNTKEL 1031
>SPAC22F3.03c [L] KOG0390 DNA repair protein SNF2 family
Length = 768
Score = 110 bits (274), Expect = 2e-23
Identities = 88/339 (25%), Positives = 155/339 (44%), Gaps = 36/339 (10%)
Query: 741 VTSPAAADPLAVSDVPVPSLLRGTLRIYQKQGLNWLASLYNNKT-----NGILADEMGLG 795
++ P DP DV + L L +Q++G+++L + ILADEMGLG
Sbjct: 138 MSRPKTWDPRTHVDVVIDPFLSKHLYSHQREGVSFLYDCLLGMEGKCGYSAILADEMGLG 197
Query: 796 KTIQTISLL------AYLACEKENWGPHLIVVPTSVLLNWEMEFKRFAPGFKVLTYYGSP 849
KT+QTI+++ +Y A ++V P ++L NWE EF + ++ Y
Sbjct: 198 KTLQTITVVWTLLKQSYYANRSSTINNAMVVAPVTLLKNWENEFYNWLGHERIHVYIA-- 255
Query: 850 QQRREKRKGWNKPDAFHVCITSYQLVVHDQHSFKRK-KWQYMILDEAHNIKNFRSTRWQA 908
+ E + + + + IT Y+ V ++ +I DEAH +K+ S W
Sbjct: 256 -RCAEDFQEFTSNKTYSIIITGYETVCTYLRNYGCGIDIDLLICDEAHRLKSMSSQTWIT 314
Query: 909 LLNFNTERRLLLTGTPLQNNLAELWSLLYFLMPQTALENGKVSGFADLDAFQQWFGRPVD 968
L T +RLLLTGTPLQN+L+E +S++ F++P ++F+ + RP+
Sbjct: 315 LNKLKTRKRLLLTGTPLQNDLSEYFSMVNFIIP---------GSLGTPNSFKAQYERPIL 365
Query: 969 KIVETGENYEQDEETKKTVSKLHQVLRPYLLRRLKADVEKQMPGKYEHIIYCRLSKRQRF 1028
+ + + +L + + LRR + K +P + + +++ + + +Q
Sbjct: 366 RSRSMNASSRDISLGAARLQRLFEFTSNFTLRRKANILAKHLPPRTDIVLFIKPTHQQEN 425
Query: 1029 LY----DDFMSRAQTKETLASGNFMSIINCLMQLRKVCN 1063
+Y D F S K G ++ I L +L K+CN
Sbjct: 426 VYGHVLDGFKSSVDQK-----GYYLKI---LTRLSKICN 456
Score = 94.7 bits (234), Expect = 1e-18
Identities = 52/159 (32%), Positives = 86/159 (53%), Gaps = 3/159 (1%)
Query: 1328 RALIFTQMTKVLDILEQFLNFHGYLYMRLDGATKIEDRQILTERFNSDP--RITVFILSS 1385
+A+I +Q + L+++E FL+ + +L G+T +R ++ FN+ +V +LSS
Sbjct: 507 KAVIVSQYKETLELIELFLSILHVRFCKLLGSTPFSERDLIVHNFNTSSFKEFSVLLLSS 566
Query: 1386 RSGGLGINLTGADTVIFYDSDWNPAMDKQCQDRCHRIGQTRDVHIYRFVSDHTIESNILK 1445
++GG G+NLTG+ +I Y+ WNPA D Q R +R GQ R V IY F+S ++ I
Sbjct: 567 KAGGCGLNLTGSTRLIIYEPSWNPAQDLQALSRIYRSGQKRPVCIYTFLSSGMLDERIFI 626
Query: 1446 KANQKRHLDNVVIQT-GDFTTDYFTKLSVKDLLGAEAPE 1483
+ N K+ L + I + ++FT +K L E
Sbjct: 627 RQNTKQGLSSSFIDSDASQKKNFFTGEDIKTLFSYSKTE 665
>CE23323 [L] KOG0390 DNA repair protein SNF2 family
Length = 751
Score = 110 bits (274), Expect = 2e-23
Identities = 60/151 (39%), Positives = 92/151 (60%), Gaps = 6/151 (3%)
Query: 1330 LIFTQMTKVLDILEQFLNFHGYLYMRLDGATKIEDRQILTERFNS--DPRITVFILSSRS 1387
+I + + LD+++Q + + +RLDG T++ DRQ L FN DP +F+LS+++
Sbjct: 455 VIVSNYIETLDMIQQLCEYLNFKVLRLDGKTQVPDRQKLVRTFNDHRDPS-NIFLLSTKA 513
Query: 1388 GGLGINLTGADTVIFYDSDWNPAMDKQCQDRCHRIGQTRDVHIYRFVSDHTIESNILKKA 1447
GG+G+NL GA ++ +DSDWNPA D+Q R R GQ R HIYR ++ TIE +L++
Sbjct: 514 GGVGLNLIGASRLVLFDSDWNPANDQQAMARIWRDGQVRPCHIYRLITTGTIEEKMLQRQ 573
Query: 1448 NQKRHLDNVV--IQTGDFTTDYFTKLSVKDL 1476
+K L V+ I+ GD T FT +KD+
Sbjct: 574 IKKTGLGCVIDAIEVGD-TIATFTDEDLKDI 603
Score = 81.3 bits (199), Expect = 1e-14
Identities = 68/256 (26%), Positives = 112/256 (43%), Gaps = 52/256 (20%)
Query: 818 LIVVPTSVLLNWEMEFKRF-----APGFKVLTYYGSPQQRREKRKGWNKPDAFHVCITSY 872
LI+VP+S++ NW+ EF ++ P LT + + + SY
Sbjct: 188 LIIVPSSLVNNWKAEFDKWWRLMRFPAVIALTANDITTYQSTIK-------LMPYLVISY 240
Query: 873 QLVVHDQHSFKRKKWQYMILDEAHNIKNFRSTRWQALLNFNTERRLLLTGTPLQNNLAEL 932
L K ++ M+ DE H +KN + LL+ RRL+LTGTP+QN+ E
Sbjct: 241 DLAQRHVEKLKIIRFDVMVCDEGHKLKNLDGKLRKTLLSLEIPRRLILTGTPMQNDFEEF 300
Query: 933 WSLLYFLMPQTALENGKVSGFADLDAFQQWFGRPVDKIVETGENYEQDEETKKTVSKLHQ 992
+SLL F+ P FG V+ + EQ L++
Sbjct: 301 YSLLDFVRPSV-------------------FGSIVEFRKMCSDRPEQ----------LNE 331
Query: 993 VLRPYLLRRLKADVE-KQMPGKYEHIIYCRLSKRQRFLYDDFMSRAQTKETLASGNFMSI 1051
++ +LRR ADV+ K +P K+E+I++C S Q+ ++ + +G+ +S+
Sbjct: 332 LIDECMLRRTAADVDLKHLPEKHEYILFCAASPIQKHVHSEICD-------YMTGDALSL 384
Query: 1052 INCLMQLRKVCNHPDL 1067
I R++ NHP L
Sbjct: 385 I---FFARQLANHPKL 397
>YGL163c [L] KOG0390 DNA repair protein SNF2 family
Length = 898
Score = 109 bits (273), Expect = 3e-23
Identities = 84/303 (27%), Positives = 146/303 (47%), Gaps = 36/303 (11%)
Query: 787 ILADEMGLGKTIQTISLLAYLACEKENWGPH--------LIVVPTSVLLNWEMEFKRFAP 838
I+ADEMGLGKT+Q I+L+ L + GP +IV P+S++ NW E ++
Sbjct: 332 IMADEMGLGKTLQCIALMWTLLRQ----GPQGKRLIDKCIIVCPSSLVNNWANELIKWL- 386
Query: 839 GFKVLTYYGSPQQRREKRKG----------WNKPDAFH----VCITSYQLVVHDQHSFKR 884
G LT ++ G W + + V I SY+ + + K
Sbjct: 387 GPNTLTPLAVDGKKSSMGGGNTTVSQAIHAWAQAQGRNIVKPVLIISYETLRRNVDQLKN 446
Query: 885 KKWQYMILDEAHNIKNFRSTRWQALLNFNTERRLLLTGTPLQNNLAELWSLLYFLMPQTA 944
M+ DE H +KN S + AL + + RR++L+GTP+QN+L+E ++LL F P
Sbjct: 447 CNVGLMLADEGHRLKNGDSLTFTALDSISCPRRVILSGTPIQNDLSEYFALLSFSNP--- 503
Query: 945 LENGKVSGFADLDAFQQWFGRPVDKIVETGENYEQDEETKKTVSKLHQVLRPYLLRRLKA 1004
G + A+ F++ F P+ + + ++ + + + KL ++ +++RR
Sbjct: 504 ---GLLGSRAE---FRKNFENPILRGRDADATDKEITKGEAQLQKLSTIVSKFIIRRTND 557
Query: 1005 DVEKQMPGKYEHIIYCRLSKRQRFLYDDFMSRAQTKETLASGNFMSIINCLMQLRKVCNH 1064
+ K +P KYEH+I+ L Q LY+ + + K+ + + + L+K+CNH
Sbjct: 558 ILAKYLPCKYEHVIFVNLKPLQNELYNKLIKSREVKKVVKGVGGSQPLRAIGILKKLCNH 617
Query: 1065 PDL 1067
P+L
Sbjct: 618 PNL 620
Score = 109 bits (272), Expect = 4e-23
Identities = 56/154 (36%), Positives = 90/154 (58%), Gaps = 1/154 (0%)
Query: 1324 DNGHRALIFTQMTKVLDILEQFLNFHGYLYMRLDGATKIEDRQILTERFNS-DPRITVFI 1382
++ + ++ + T+ LD++E+ + Y +RLDG I RQ L +RFN + + +F+
Sbjct: 670 ESDDKIVLISNYTQTLDLIEKMCRYKHYSAVRLDGTMSINKRQKLVDRFNDPEGQEFIFL 729
Query: 1383 LSSRSGGLGINLTGADTVIFYDSDWNPAMDKQCQDRCHRIGQTRDVHIYRFVSDHTIESN 1442
LSS++GG GINL GA+ +I D DWNPA D+Q R R GQ +D IYRF+S TIE
Sbjct: 730 LSSKAGGCGINLIGANRLILMDPDWNPAADQQALARVWRDGQKKDCFIYRFISTGTIEEK 789
Query: 1443 ILKKANQKRHLDNVVIQTGDFTTDYFTKLSVKDL 1476
I ++ + K L + V+ + F+ +++ L
Sbjct: 790 IFQRQSMKMSLSSCVVDAKEDVERLFSSDNLRQL 823
>Hs17437081 [B] KOG0389 SNF2 family DNA-dependent ATPase
Length = 619
Score = 107 bits (266), Expect = 2e-22
Identities = 57/105 (54%), Positives = 72/105 (68%), Gaps = 3/105 (2%)
Query: 754 DVPVPSLLRGTLRI--YQKQGLNWLASLYNNKTNGILADEMGLGKTIQTISLLAYLACEK 811
++ PS+L +L + YQK GLNWLA ++ + NGILADEMGLGKTIQ I+ LAYL E
Sbjct: 484 NIEQPSILNQSLSLKPYQKVGLNWLALVHKHGLNGILADEMGLGKTIQAIAFLAYLYQEG 543
Query: 812 ENWGPHLIVVPTSVLLNWEMEFKRFAPGFKVLTYYGSPQQRREKR 856
N GPHLIVVP S + NW E + P KVL YYGS ++R++ R
Sbjct: 544 NN-GPHLIVVPASTIDNWLREVNLWCPTLKVLCYYGSQEERKQIR 587
>YBR114w [L] KOG1002 Nucleotide excision repair protein RAD16
Length = 790
Score = 106 bits (264), Expect = 3e-22
Identities = 95/354 (26%), Positives = 161/354 (44%), Gaps = 75/354 (21%)
Query: 768 YQKQGLNWLASLYNN-KTNGILADEMGLGKTIQTISLLAYLACEKENWGPHLIVVPTSVL 826
+Q +GL+WL S + G+LADEMG+GKTIQTI+LL + P L+V PT L
Sbjct: 187 FQLEGLHWLISQEESIYAGGVLADEMGMGKTIQTIALLMNDLTKS----PSLVVAPTVAL 242
Query: 827 LNWEMEFKRFAPG-FKVLTYYGSPQQRREKRKGWNKPDAFHVCITSYQLVVH----DQHS 881
+ W+ E ++ G K+ Y+G+ + K + V +T+Y ++ +
Sbjct: 243 MQWKNEIEQHTKGQLKIYIYHGASRTTDIKDL-----QGYDVVLTTYAVLESVFRKQNYG 297
Query: 882 FKRKKWQY-------------MILDEAHNIKNFRSTRWQALLNFNTERRLLLTGTPLQNN 928
F+RK + +ILDEAHNIK+ +S +A+ N T++R L+GTPLQN
Sbjct: 298 FRRKNGLFKQPSVLHNIDFYRVILDEAHNIKDRQSNTARAVNNLKTQKRWCLSGTPLQNR 357
Query: 929 LAELWSLLYFL--MPQT---------ALENGKVSGFADLD-----------AFQQWFGRP 966
+ E++SL+ FL P T A ++ K + D F + +
Sbjct: 358 IGEMYSLIRFLNINPFTKYFCTKCDCASKDWKFTDRMHCDHCSHVIMQHTNFFNHFMLKN 417
Query: 967 VDKIVETGENYEQDEETKKTVSKLHQVLRPYLLRRLKAD-------------VEKQMPGK 1013
+ K G E + + + +L+ +LRR K + V + +
Sbjct: 418 IQKFGVEGPGLE-------SFNNIQTLLKNIMLRRTKVERADDLGLPPRIVTVRRDFFNE 470
Query: 1014 YEHIIYCRLSKRQRFLYDDFMSRAQTKETLASGNFMSIINCLMQLRKVCNHPDL 1067
E +Y L + Y+ F+ +E + N+ +I + ++R++ +HPDL
Sbjct: 471 EEKDLYRSLYTDSKRKYNSFV-----EEGVVLNNYANIFTLITRMRQLADHPDL 519
Score = 84.3 bits (207), Expect = 1e-15
Identities = 45/149 (30%), Positives = 82/149 (54%)
Query: 1328 RALIFTQMTKVLDILEQFLNFHGYLYMRLDGATKIEDRQILTERFNSDPRITVFILSSRS 1387
++++F+Q T +LD++E L G+ ++L G+ R + F ++ + VF++S ++
Sbjct: 639 KSIVFSQFTSMLDLVEWRLKRAGFQTVKLQGSMSPTQRDETIKYFMNNIQCEVFLVSLKA 698
Query: 1388 GGLGINLTGADTVIFYDSDWNPAMDKQCQDRCHRIGQTRDVHIYRFVSDHTIESNILKKA 1447
GG+ +NL A V D WNP+++ Q DR HRIGQ R V I RF + +IE+ I++
Sbjct: 699 GGVALNLCEASQVFILDPWWNPSVEWQSGDRVHRIGQYRPVKITRFCIEDSIEARIIELQ 758
Query: 1448 NQKRHLDNVVIQTGDFTTDYFTKLSVKDL 1476
+K ++ + I + T ++ L
Sbjct: 759 EKKANMIHATINQDEAAISRLTPADLQFL 787
>SPCC330.01c [L] KOG1002 Nucleotide excision repair protein RAD16
Length = 963
Score = 106 bits (264), Expect = 3e-22
Identities = 100/406 (24%), Positives = 178/406 (43%), Gaps = 63/406 (15%)
Query: 711 AENNSKTE--ELPSPPKSDNELKDEKAETTESVTSPAAADPLAVSDVPVPSLLRGTLRIY 768
A ++S+T+ +PS ++ L + E P V + P L L +
Sbjct: 301 ASSSSRTQAKSIPSHERTHYRLIRQHPELEHVWEKLEEEAPREVKQIEQPKELVLNLLPF 360
Query: 769 QKQGLNWLASLYNNKTNG-ILADEMGLGKTIQTISLLAYLACEKENWGPHLIVVPTSVLL 827
Q++G+ WL ++ G ILADEMG+GKTIQTI+LL + P L+V P ++
Sbjct: 361 QREGVYWLKRQEDSSFGGGILADEMGMGKTIQTIALLL----SEPRGKPTLVVAPVVAIM 416
Query: 828 NWEMEFKRFA-PGFKVLTYYGSPQQRREKRKGWNKPDAFHVCITSYQLVVH----DQHSF 882
W+ E YYG + + ++ V +TSY ++ ++ F
Sbjct: 417 QWKEEIDTHTNKALSTYLYYGQARDISGEELS-----SYDVVLTSYNVIESVYRKERSGF 471
Query: 883 KRK-------------KWQYMILDEAHNIKNFRSTRWQALLNFNTERRLLLTGTPLQNNL 929
+RK ++ +ILDEAH IK+ +A+ T R++ L+GTPLQN +
Sbjct: 472 RRKNGVVKEKSLLHQMEFYRIILDEAHGIKSRTCNTARAVCGLRTTRKICLSGTPLQNRI 531
Query: 930 AELWSLLYFLMPQT-----ALENGKVS---GFADLDAFQQWFGRPVD-------KIVETG 974
EL+SLL FL L+ S F+D + +P+ ++++
Sbjct: 532 GELFSLLRFLRADPFAYYYCLQCECKSLHWRFSDRSNCDECGHKPMSHTCYFNAEMLKPI 591
Query: 975 ENYEQDEETKKTVSKLHQVLRPYLLRRLK-------------ADVEKQMPGKYEHIIYCR 1021
+ + + K K+H +L+ +LRR K +V K + + E +Y
Sbjct: 592 QKFGYEGPGKLAFKKVHSLLKHIMLRRTKLERADDLGLPPRVVEVRKDLFNEEEEDVYQS 651
Query: 1022 LSKRQRFLYDDFMSRAQTKETLASGNFMSIINCLMQLRKVCNHPDL 1067
L + ++ +++ E + N+ +I + ++R++ +HPDL
Sbjct: 652 LYMDSKRKFNTYLA-----EGVVLNNYANIFQLITRMRQMADHPDL 692
Score = 92.4 bits (228), Expect = 5e-18
Identities = 50/153 (32%), Positives = 85/153 (54%), Gaps = 3/153 (1%)
Query: 1324 DNGHRALIFTQMTKVLDILEQFLNFHGYLYMRLDGATKIEDRQILTERFNSDPRITVFIL 1383
D ++++F+Q T +LD++ L G+ ++LDG + R E F++D IT+F++
Sbjct: 808 DRTLKSIVFSQFTSMLDLIHWRLRKAGFNCVKLDGGMTPKARAATIEAFSNDINITIFLV 867
Query: 1384 SSRSGGLGINLTGADTVIFYDSDWNPAMDKQCQDRCHRIGQTRDVHIYRFVSDHTIESNI 1443
S ++GG+ +NLT A V D WN A+ Q DR HRIGQ R + + +++IES I
Sbjct: 868 SLKAGGVALNLTEASQVFMMDPWWNGAVQWQAMDRIHRIGQKRPIKVITLCIENSIESKI 927
Query: 1444 LKKANQKRHLDNVVIQTGDFTTDYFTKLSVKDL 1476
++ +K + + I D +LSV+D+
Sbjct: 928 IELQEKKAQMIHATI---DQDEKALNQLSVEDM 957
>SPCC1620.14c [BK] KOG0386 Chromatin remodeling complex SWI/SNF component SWI2 and
related ATPases (DNA/RNA helicase superfamily)
Length = 430
Score = 105 bits (262), Expect = 6e-22
Identities = 50/91 (54%), Positives = 66/91 (71%), Gaps = 2/91 (2%)
Query: 1375 DPR--ITVFILSSRSGGLGINLTGADTVIFYDSDWNPAMDKQCQDRCHRIGQTRDVHIYR 1432
DP+ + +F+LS+R+GGLG+NL ADTVI +D+DWNP D Q QDR HRIGQT++V I R
Sbjct: 1 DPKSDVYIFMLSTRAGGLGLNLQTADTVIIFDTDWNPHQDLQAQDRAHRIGQTKEVRILR 60
Query: 1433 FVSDHTIESNILKKANQKRHLDNVVIQTGDF 1463
+++ +IE NIL +A K LD VIQ G F
Sbjct: 61 LITEKSIEENILSRAQYKLDLDGKVIQAGKF 91
>SPBC582.10c [KL] KOG1001 Helicase-like transcription factor HLTF/DNA helicase
RAD5 DEAD-box superfamily
Length = 830
Score = 105 bits (262), Expect = 6e-22
Identities = 96/344 (27%), Positives = 154/344 (43%), Gaps = 72/344 (20%)
Query: 768 YQKQGLNWLASLY----NNKTNGILADEMGLGKTIQTISLLAY--LACEKENWGPHLIVV 821
+Q QGL WL S ++ + GILAD+MGLGKTIQ I+L+ L +K + L+V
Sbjct: 236 HQVQGLTWLKSRETVSKSSASGGILADDMGLGKTIQMIALILSHPLPKKKHSIKSTLVVA 295
Query: 822 PTSVLLNWEMEFKRFAPGFKVLTYYGSPQQRREKRKGWNKPDAFHVCITSYQLVVHD--- 878
P S++ WE E + + + Y+G+ + + K + V IT+YQ++V +
Sbjct: 296 PLSLIKQWESEVQTKSK-LTAIVYHGASRYKLLK-----VIHEYDVVITTYQILVSEWVS 349
Query: 879 -------------QHSFKRKK-------WQYMILDEAHNIKNFRSTRWQALLNFNTERRL 918
S+++KK W +ILDEAH IKN S A R
Sbjct: 350 HNTTGTDGKSPTEAKSYEKKKPSLFAFYWWRIILDEAHTIKNKSSKSALACCALQGINRW 409
Query: 919 LLTGTPLQNNLAELWSLLYFLMPQTALENGKVSGFADLDAFQQWFGRPVDKIVETGENYE 978
LTGTPLQNN+ EL+SL+ FL ++ F D ++ P+ +
Sbjct: 410 CLTGTPLQNNVDELYSLVKFL---------HINPFNDQSVWKDQISLPLCQ--------- 451
Query: 979 QDEETKKTVSKLHQVLRPYLLRRLKADVEK-----------QMPGKYEHIIYCRLSKRQR 1027
E +L +L +LRR K +E ++ + + + C+ + +R
Sbjct: 452 --GEENLVFKRLRMLLSVIMLRRTKTLLEANAGKDGTGGALKLSKRLVYKVICKFEESER 509
Query: 1028 FLYDDFMSRAQ--TKETLASG----NFMSIINCLMQLRKVCNHP 1065
Y + + + SG N+ +I+ L++LR+ CNHP
Sbjct: 510 DFYSNLARNMERTMSNFVNSGKLGKNYTNILCLLLRLRQACNHP 553
Score = 102 bits (253), Expect = 6e-21
Identities = 58/150 (38%), Positives = 83/150 (54%)
Query: 1328 RALIFTQMTKVLDILEQFLNFHGYLYMRLDGATKIEDRQILTERFNSDPRITVFILSSRS 1387
+ +IF+Q T LDI++ L G ++R DG R+ + SD V + S +
Sbjct: 672 KTIIFSQFTTFLDIIDLHLRKAGIGFVRYDGRMNNRAREKSLDLLRSDSGTQVLLCSLKC 731
Query: 1388 GGLGINLTGADTVIFYDSDWNPAMDKQCQDRCHRIGQTRDVHIYRFVSDHTIESNILKKA 1447
G LG+NLT A VI D WNPA+++Q DR HRIGQ RDV +Y+ V ++TIE I++
Sbjct: 732 GALGLNLTCASRVILCDVWWNPAIEEQAIDRVHRIGQRRDVLVYKLVVENTIEEKIVELQ 791
Query: 1448 NQKRHLDNVVIQTGDFTTDYFTKLSVKDLL 1477
N KR L + G + KL++ DLL
Sbjct: 792 NLKRDLAKQALGDGKKSVFTSKKLTLNDLL 821
>7293730 [R] KOG0383 Predicted helicase
Length = 884
Score = 105 bits (262), Expect = 6e-22
Identities = 70/213 (32%), Positives = 105/213 (48%), Gaps = 22/213 (10%)
Query: 715 SKTEELPSPPKSDNELKDEKAETTESVTSPAA--ADPLAVSDVPVPSLLRGT---LRIYQ 769
S++++ KS +++D++ + T P L P+ L GT L YQ
Sbjct: 666 SRSKKSKKGRKSKLKVEDDEDRPVKHYTPPPEKPTTDLKKKYEDQPAFLEGTGMQLHPYQ 725
Query: 770 KQGLNWLASLYNNKTNGILADEMGLGKTIQTISLLAYLACEKENWGPHLIVVPTSVLLNW 829
+G+NWL + + ILADEMGLGKTIQT++ L L E GP L+ VP S L+NW
Sbjct: 726 IEGINWLRYSWGQGIDTILADEMGLGKTIQTVTFLYSLYKEGHCRGPFLVAVPLSTLVNW 785
Query: 830 EMEFKRFAPGFKVLTYYGSPQQR---REKRKGWNK--------------PDAFHVCITSY 872
E EF+ +AP F +TY G R RE + + F+V +TSY
Sbjct: 786 EREFELWAPDFYCITYIGDKDSRAVIRENELSFEEGAIRGSKVSRLRTTQYKFNVLLTSY 845
Query: 873 QLVVHDQHSFKRKKWQYMILDEAHNIKNFRSTR 905
+L+ D W +++DEAH +K+ +S +
Sbjct: 846 ELISMDAACLGSIDWAVLVVDEAHRLKSNQSKK 878
>At1g11100 [KL] KOG1001 Helicase-like transcription factor HLTF/DNA helicase
RAD5 DEAD-box superfamily
Length = 1227
Score = 105 bits (261), Expect = 7e-22
Identities = 53/128 (41%), Positives = 73/128 (56%)
Query: 1326 GHRALIFTQMTKVLDILEQFLNFHGYLYMRLDGATKIEDRQILTERFNSDPRITVFILSS 1385
G +A++FTQ TK+LD+LE L G Y R DG + R + FN+ P ++V I+S
Sbjct: 1072 GEKAIVFTQWTKMLDLLEAGLKSSGIQYRRFDGKMTVPARDAAVQDFNTLPDVSVMIMSL 1131
Query: 1386 RSGGLGINLTGADTVIFYDSDWNPAMDKQCQDRCHRIGQTRDVHIYRFVSDHTIESNILK 1445
++ LG+N+ A VI D WNP + Q DR HRIGQTR V + RF T+E IL
Sbjct: 1132 KAASLGLNMVAACHVIMLDLWWNPTTEDQAIDRAHRIGQTRPVKVVRFTVKDTVEDRILA 1191
Query: 1446 KANQKRHL 1453
+KR +
Sbjct: 1192 LQQKKRKM 1199
Score = 101 bits (251), Expect = 1e-20
Identities = 98/376 (26%), Positives = 160/376 (42%), Gaps = 92/376 (24%)
Query: 756 PVPSLLRGTLRIYQKQGLNWLASLYNNKT---NGILADEMGLGKTIQTISLLA------Y 806
P +L +L +Q+ L+W++ + GILAD+ GLGKT+ TI+L+ Y
Sbjct: 533 PPDGVLAVSLLRHQRIALSWMSQKETSGNPCFGGILADDQGLGKTVSTIALILTERSTPY 592
Query: 807 LACEKE------NWGPH--------------------------LIVVPTSVLLNWEMEFK 834
L CE++ N H LIV PTS++ W E +
Sbjct: 593 LPCEEDSKNGGCNQSDHSQVVFNENKVVEDSLCKMRGRPAAGTLIVCPTSLMRQWADELR 652
Query: 835 R---FAPGFKVLTYYGSPQQRREKRKGWNKPDAFHVCITSYQLVVHDQHS---------- 881
+ VL Y+G + K ++ + V IT+Y LV +H
Sbjct: 653 KKVTLEAHLSVLVYHGC-----SRTKDPHELAKYDVVITTYSLVSKRKHMDCEPVEFLSG 707
Query: 882 -FKRKKWQYMILDEAHNIKNFRSTRWQALLNFNTERRLLLTGTPLQNNLAELWSLLYFLM 940
+ W ++LDEA +IKN+++ A + +RR L+GTP+QN++A+L+S FL
Sbjct: 708 PLAQVSWFRVVLDEAQSIKNYKTQASIACSGLHAKRRWCLSGTPIQNSIADLYSYFRFL- 766
Query: 941 PQTALENGKVSGFADLDAFQQWFGRPVDKIVETGENYEQDEETKKTVSKLHQVLRPYLLR 1000
K ++ F + P+ GE Y+ L +L+ +LR
Sbjct: 767 --------KYDPYSSYQTFCETIKNPISSY--PGEGYK----------TLQAILKKVMLR 806
Query: 1001 RLKADVEK-----QMPGKYEHIIYCRLSKRQRFLYD--DFMSRAQTKETLASG----NFM 1049
R K + +P K + +K +R Y + SR Q KE +G N++
Sbjct: 807 RTKDTLLDGKPVISLPPKSIELRRVDFTKEERDFYSKLECDSRDQFKEYAEAGTVKQNYV 866
Query: 1050 SIINCLMQLRKVCNHP 1065
+I+ L++LR+ C HP
Sbjct: 867 NILLMLLRLRQACGHP 882
>At1g08600 [K] KOG1015 Transcription regulator XNP/ATRX DEAD-box superfamily
Length = 1447
Score = 102 bits (254), Expect = 5e-21
Identities = 103/355 (29%), Positives = 162/355 (45%), Gaps = 56/355 (15%)
Query: 755 VPVPSLLRGTLRIYQKQGL-----NWLASLYNNKTNG-----ILADEMGLGKTIQTISLL 804
V VP + L+++Q G+ N + S+ K+ ILA MGLGKT Q I+ L
Sbjct: 677 VRVPRSISAKLKVHQVTGIRFMWENIIQSISRVKSGDKGLGCILAHTMGLGKTFQVIAFL 736
Query: 805 -AYLACEKENWGPHLIVVPTSVLLNWEMEFKRFAPG-FKVLTYYGSPQQRREKR-----K 857
+ C LIV P +VL NW EF+++ P K L + RE+R K
Sbjct: 737 YTAMRCVDLGLKTALIVTPVNVLHNWRSEFEKWMPSEVKPLRIFMLGDVSRERRFDLLTK 796
Query: 858 GWNKPDAFHVCITSYQLV-----VHDQHSFK------RKKWQYMILDEAHNIKNFRSTRW 906
K F + T+++ + V D ++ + R ++ DEAH IKN ++
Sbjct: 797 WRKKGGVFLMGYTNFRNLSLGRGVKDLNAARGICNALRDGPDILVCDEAHIIKNTKADTT 856
Query: 907 QALLNFNTERRLLLTGTPLQNNLAELWSLLYFLMPQTALENGKVSGF-ADLDAFQQWFGR 965
QAL +RR+ LTG+PLQNNL E + ++ F+ GF F+ F
Sbjct: 857 QALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVR----------EGFLGSSPEFRNRFQN 906
Query: 966 PVDKIVETGENYEQDEETKKTVSK----LHQVLRPYLLRRLKADVEKQMPGKYEHIIYCR 1021
P +E G++ E K +++ L++ L+ ++ R V+K +P K +I +
Sbjct: 907 P----IENGQHMNSTAEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVISVK 962
Query: 1022 LSKRQRFLYDDFM-----SRAQTKETLASGNFMSIINCLMQLRKVCNHPDLFEVR 1071
LS QR LY F+ S +T E + NF + L Q + NHP + ++R
Sbjct: 963 LSPLQRILYQRFLELYGFSDGRTDERMRK-NFFAAYQVLAQ---ILNHPGIPQLR 1013
Score = 87.8 bits (216), Expect = 1e-16
Identities = 53/144 (36%), Positives = 76/144 (51%), Gaps = 14/144 (9%)
Query: 1324 DNGHRALIFTQMTKVLDILEQFLNF------------HGYLYMRLDGATKIEDRQILTER 1371
D G +AL+F+Q LD++E +L+ G + R+DG T+ +RQ L +R
Sbjct: 1097 DVGDKALVFSQSIPTLDLIELYLSRVPRHGKQGKFWKKGKDWYRIDGKTESSERQKLVDR 1156
Query: 1372 FNS--DPRITVFILSSRSGGLGINLTGADTVIFYDSDWNPAMDKQCQDRCHRIGQTRDVH 1429
FN + R+ ++S+R+G LGINL A+ VI D WNP D Q R R GQ + V
Sbjct: 1157 FNEPDNKRVKCTLISTRAGSLGINLYAANRVIIVDGSWNPTYDLQAIFRAWRYGQKKPVF 1216
Query: 1430 IYRFVSDHTIESNILKKANQKRHL 1453
YR ++ TIE I K+ K L
Sbjct: 1217 AYRLMARGTIEEKIYKRQVTKEGL 1240
>CE17477 [R] KOG1016 Predicted DNA helicase DEAD-box superfamily
Length = 1274
Score = 102 bits (253), Expect = 6e-21
Identities = 59/178 (33%), Positives = 91/178 (50%), Gaps = 15/178 (8%)
Query: 1326 GHRALIFTQMTKVLDILEQFLNFHGYL--------------YMRLDGATKIEDRQILTER 1371
G + LIF+Q LD+LE+ L Y+RLDG T DR+ L R
Sbjct: 793 GEKILIFSQNLTALDMLEEILKKRQIRGKDGPGQRWEKNRNYLRLDGTTSGADREKLINR 852
Query: 1372 FNSDPRITVFILSSRSGGLGINLTGADTVIFYDSDWNPAMDKQCQDRCHRIGQTRDVHIY 1431
FNS+P +++F++S+R+G LGINL A+ I D+ WNP D Q R +R GQ + +Y
Sbjct: 853 FNSEPGLSLFLISTRAGSLGINLVSANRCIIIDACWNPCHDAQAVCRVYRYGQQKKTFVY 912
Query: 1432 RFVSDHTIESNILKKANQKRHLDNVVIQTGDFTTDYFTKLSVKDLLGAEAPEDIPDDK 1489
R + D+++E +I + K L V+ + K ++ LL + +D+ DK
Sbjct: 913 RLIMDNSMERSIFNRQISKHGLQQRVVDDAQVDANISQK-ELETLLMYDEAQDVNHDK 969
Score = 70.5 bits (171), Expect = 2e-11
Identities = 54/185 (29%), Positives = 95/185 (51%), Gaps = 23/185 (12%)
Query: 890 MILDEAHNIKNFRSTRWQALLNFNTERRLLLTGTPLQNNLAELWSLLYFLMPQTALENGK 949
++ DE H IKN + L NT+RR++LTG PLQNNL E + ++ F+ P+ G
Sbjct: 460 VVCDEGHKIKNITAEISMTLGAINTKRRIVLTGYPLQNNLLEYFCMIDFVRPKYL---GT 516
Query: 950 VSGFADLDAFQQWFGRPVDKIVETGENYEQD-EETKKTVSKLH---QVLRPYLLRRLKAD 1005
F D +K ++ G+ + ++ K + + H ++++ ++ RR
Sbjct: 517 RKSFID----------RFEKPIKNGQCVDSSPDDVKIALQRTHVLVELVKGFVQRRTHHL 566
Query: 1006 VEKQMPGKYEHIIYCRLSKRQRFLYDDFMSRAQTKETLASGNFMSIINCLMQL---RKVC 1062
++K +P E+++ R S+ QR LY +F+ A K +A+ N ++ N LM K+
Sbjct: 567 LKKILPESKEYVLLLRKSQIQRQLYRNFVLWA--KNEIAANN-DAVFNPLMAFSACSKIW 623
Query: 1063 NHPDL 1067
NHPD+
Sbjct: 624 NHPDI 628
>At1g61140 [KL] KOG1001 Helicase-like transcription factor HLTF/DNA helicase
RAD5 DEAD-box superfamily
Length = 1287
Score = 100 bits (248), Expect = 2e-20
Identities = 51/126 (40%), Positives = 72/126 (56%)
Query: 1326 GHRALIFTQMTKVLDILEQFLNFHGYLYMRLDGATKIEDRQILTERFNSDPRITVFILSS 1385
G +A++F+Q TK+L++LE L Y RLDG + R + FN+ P +TV I+S
Sbjct: 1130 GEKAIVFSQWTKMLNLLEASLVSSHIQYRRLDGTMSVAARDKAVQDFNTLPEVTVMIMSL 1189
Query: 1386 RSGGLGINLTGADTVIFYDSDWNPAMDKQCQDRCHRIGQTRDVHIYRFVSDHTIESNILK 1445
++ LG+N+ A V+ D WNP + Q DR HRIGQTR V + RF T+E IL
Sbjct: 1190 KAASLGLNMVAACHVLMLDLWWNPTTEDQAIDRAHRIGQTRPVTVVRFTVKDTVEDRILA 1249
Query: 1446 KANQKR 1451
+KR
Sbjct: 1250 LQQKKR 1255
Score = 64.3 bits (155), Expect = 1e-09
Identities = 72/314 (22%), Positives = 123/314 (38%), Gaps = 92/314 (29%)
Query: 818 LIVVPTSVLLNWEMEFKRFAPG---FKVLTYYGSPQQRREKRKGWNKPDAFHVCITSYQL 874
L+V PTSV+ W E + VL Y+GS + K ++ + V +T++ +
Sbjct: 675 LVVCPTSVMRQWADELHKKVTSEANLSVLVYHGS-----SRTKDPHELAKYDVVVTTFSI 729
Query: 875 V-------------------VHD---------------------QHSFKRKK-------- 886
V VHD + K+KK
Sbjct: 730 VSMEVPKQPLVDDEDEEKDGVHDGGTAATGFCSNKKRKYPPDSKKKGSKKKKVEFLSGPL 789
Query: 887 ----WQYMILDEAHNIKNFRSTRWQALLNFNTERRLLLTGTPLQNNLAELWSLLYFLMPQ 942
W ++LDEA +IKN+++ +A +RR L+GTP+QN++ +L+S FL
Sbjct: 790 AKVSWFRVVLDEAQSIKNYKTQVARACWGLRAKRRWCLSGTPIQNSIDDLYSYFRFL--- 846
Query: 943 TALENGKVSGFADLDAFQQWFGRPVDKIVETGENYEQDEETKKTVSKLHQVLRPYLLRRL 1002
K ++ F P+ + K KL +L+ +LRR
Sbjct: 847 ------KYDPYSSYVLFCSTIKNPITR------------NPVKGYQKLQAILKTVMLRRT 888
Query: 1003 KADVEK-----QMPGKYEHIIYCRLSKRQRFLYD--DFMSRAQTKETLASG----NFMSI 1051
K + +P K + + +R Y + SR Q +E +G N+++I
Sbjct: 889 KGSLLDGKPIISLPPKSIELRKVDFTVEERDFYSKLEAESRTQFREYAEAGTVKQNYVNI 948
Query: 1052 INCLMQLRKVCNHP 1065
+ L++LR+ C+HP
Sbjct: 949 LLMLLRLRQACDHP 962
>SPAC17A2.12 [KL] KOG1001 Helicase-like transcription factor HLTF/DNA helicase
RAD5 DEAD-box superfamily
Length = 897
Score = 99.0 bits (245), Expect = 5e-20
Identities = 90/349 (25%), Positives = 157/349 (44%), Gaps = 55/349 (15%)
Query: 768 YQKQGLNWLASL-YNNKTNGILADEMGLGKTIQTISLLAYLACEKENWGPHLIVVPTSVL 826
+Q +G W+ S+ ++K G++AD+MGLGKTIQTI+LL + +LIVV ++L
Sbjct: 253 HQVEGHAWMESMEQSSKCGGVMADDMGLGKTIQTIALLLTQKSQDPLRKTNLIVVSVALL 312
Query: 827 LNWEMEFK-RFAPGFKVLTY--YGSPQQRREKRKGWNKPDAFHVCITSYQLVVHDQH--- 880
W E + P K+ Y +GS ++ + + + V +T+Y ++ ++
Sbjct: 313 HQWAEELSTKVHPSKKLSVYIHHGSTKKNLDSYE----LSQYDVVLTTYSMLAYEMKQND 368
Query: 881 ----------------SFKRKKWQYMILDEAHNIKNFRSTRWQALLNFNTERRLLLTGTP 924
S W ++LDEAH I+N + + + + + R L+GTP
Sbjct: 369 AFNNNNPATATPPPACSLLETSWYRIVLDEAHTIRNRDTLAAKCCVKLDAKYRWCLSGTP 428
Query: 925 LQNNLAELWSLLYFLMPQTALENGKVSGFADLDAFQQWFGRPVDKIVETGENYEQDEETK 984
+QN++ E +SLL FL ++ + F + RP+ ++Y D +
Sbjct: 429 IQNHIDEFYSLLKFL---------RIKPYCVWSLFAKDISRPL-------KSYRAD-IVE 471
Query: 985 KTVSKLHQVLRPYLLRRLKADVEK-----QMPGKYEHIIYCRLSKRQRFLYDDFMSRAQT 1039
+ +L +L + RR K +P K + L +R LY++ MS AQ+
Sbjct: 472 AALKRLRILLASTVFRRTKETRVNNLPIVNLPPKTIRTVSVNLLPEERALYNEQMSSAQS 531
Query: 1040 KETLASGN------FMSIINCLMQLRKVCNHPDLFEVRPILTSFCIEDS 1082
N + ++ L++LR+ C HP L + + SF I DS
Sbjct: 532 LVDNYFNNDHDLSRYGFLLVSLLRLRQFCCHPWLVKSSSLDNSFRIRDS 580
Score = 89.4 bits (220), Expect = 4e-17
Identities = 45/150 (30%), Positives = 84/150 (56%), Gaps = 2/150 (1%)
Query: 1328 RALIFTQMTKVLDILEQFLNFHGYLYMRLDGATKIEDRQILTERFNSDPRITVFILSSRS 1387
+ L+++Q ++ L ++ L ++R DG RQ FN+D + V ++S ++
Sbjct: 743 KILVYSQFSQYLCLVSHMLKLENIRHVRYDGTMSANQRQKSLHSFNNDKDVLVMLVSLKA 802
Query: 1388 GGLGINLTGADTVIFYDSDWNPAMDKQCQDRCHRIGQTRDVHIYRFVSDHTIESNILKKA 1447
G +G+NLT A+ VI + +NP+++ Q DR HR+GQ + V +YRF++ TIE I+
Sbjct: 803 GSVGLNLTIANHVILQEPFYNPSIEDQAIDRVHRLGQQKPVTVYRFITKDTIEERIVSVQ 862
Query: 1448 NQKRHLDNVVIQTGDFTTDYFTKLSVKDLL 1477
+KR L + + + + ++L ++LL
Sbjct: 863 RKKRQLVKEALDSNE--NNPLSRLDKEELL 890
>At1g05120 [L] KOG1002 Nucleotide excision repair protein RAD16
Length = 833
Score = 98.6 bits (244), Expect = 7e-20
Identities = 46/127 (36%), Positives = 75/127 (58%)
Query: 1324 DNGHRALIFTQMTKVLDILEQFLNFHGYLYMRLDGATKIEDRQILTERFNSDPRITVFIL 1383
D +A++F+Q T LD++ L G ++L G+ + R +F DP VF++
Sbjct: 678 DGSAKAIVFSQFTSFLDLINYTLGKCGVSCVQLVGSMTMAARDTAINKFKEDPDCRVFLM 737
Query: 1384 SSRSGGLGINLTGADTVIFYDSDWNPAMDKQCQDRCHRIGQTRDVHIYRFVSDHTIESNI 1443
S ++GG+ +NLT A V D WNPA+++Q QDR HRIGQ + + + RF+ ++T+E I
Sbjct: 738 SLKAGGVALNLTVASHVFMMDPWWNPAVERQAQDRIHRIGQYKPIRVVRFIIENTVEERI 797
Query: 1444 LKKANQK 1450
L+ +K
Sbjct: 798 LRLQKKK 804
Score = 58.5 bits (140), Expect = 8e-08
Identities = 54/151 (35%), Positives = 73/151 (47%), Gaps = 24/151 (15%)
Query: 712 ENNSKTEELPSPPKSDNELKDEKAETTESVTSPAAADPLAVSDVPVPSLLRGTLRIYQKQ 771
E NS +E S D +L A E+ P SD+ +P LLR YQK+
Sbjct: 103 EQNSWIDEHMS---EDVDLDQHNAVIAETAEPP--------SDLIMP-LLR-----YQKE 145
Query: 772 GLNWLASLYNNKTNGILADEMGLGKTIQTISL-LAYLACEKENWGP----HLIVVPTSVL 826
L W + GILADEMG+GKTIQ ISL LA ++ +G L++ P +
Sbjct: 146 FLAWATKQEQSVAGGILADEMGMGKTIQAISLVLARREVDRAQFGEAAGCTLVLCPLVAV 205
Query: 827 LNWEMEFKRF-APG-FKVLTYYGSPQQRREK 855
W E RF +PG KVL Y+G+ + + K
Sbjct: 206 SQWLNEIARFTSPGSTKVLVYHGAKRAKNIK 236
Score = 53.5 bits (127), Expect = 3e-06
Identities = 55/206 (26%), Positives = 89/206 (42%), Gaps = 26/206 (12%)
Query: 886 KWQYMILDEAHNIKNFRSTRWQALLNFNTERRLLLTGTPLQNNLAELWSLLYFLMPQT-- 943
KW +ILDEAH IK RS +A+ R L+GTPLQN + EL+SL+ FL +
Sbjct: 353 KWNRIILDEAHYIKERRSNTARAVFALEATYRWALSGTPLQNRVGELYSLIRFLQIRPYS 412
Query: 944 -ALENGKVSGFADLDAFQQ-------------WFGRPVDKIVETGENYEQDEETKKTVSK 989
D A Q W+ + V K + ++ + + +
Sbjct: 413 YYFCKDCDCRILDYVAHQSCPHCPHNAVRHFCWWNKYVAKPITVYGSFGLGK--RAMILL 470
Query: 990 LHQVLRPYLLRRLKAD--VEKQMPGKYEHIIYCRLSKRQRFLYDDFM--SRAQTKETLAS 1045
H+VL+ LLRR K + +P + + L ++ Y+ S+A+ + +
Sbjct: 471 KHKVLKDILLRRTKLGRAADLALPPRIITLRRDTLDVKEFDYYESLYKNSQAEFNTYIEA 530
Query: 1046 G----NFMSIINCLMQLRKVCNHPDL 1067
G N+ I + L +LR+ +HP L
Sbjct: 531 GTLMNNYAHIFDLLTRLRQAVDHPYL 556
>Hs19923174 [KL] KOG4439 RNA polymerase II transcription termination factor
TTF2/lodestar DEAD-box superfamily
Length = 1162
Score = 98.2 bits (243), Expect = 9e-20
Identities = 50/151 (33%), Positives = 83/151 (54%)
Query: 1328 RALIFTQMTKVLDILEQFLNFHGYLYMRLDGATKIEDRQILTERFNSDPRITVFILSSRS 1387
+++I +Q T +L ++ L HG Y +DG+ + R L E FN V ++S +
Sbjct: 1011 KSVIVSQWTNMLKVVALHLKKHGLTYATIDGSVNPKQRMDLVEAFNHSRGPQVMLISLLA 1070
Query: 1388 GGLGINLTGADTVIFYDSDWNPAMDKQCQDRCHRIGQTRDVHIYRFVSDHTIESNILKKA 1447
GG+G+NLTG + + D WNP+++ Q DR +R+GQ +DV I+RFV + T+E IL+
Sbjct: 1071 GGVGLNLTGGNHLFLLDMHWNPSLEDQACDRIYRVGQQKDVVIHRFVCEGTVEEKILQLQ 1130
Query: 1448 NQKRHLDNVVIQTGDFTTDYFTKLSVKDLLG 1478
+K+ L V+ + T ++ L G
Sbjct: 1131 EKKKDLAKQVLSGSGESVTKLTLAHLRVLFG 1161
Score = 92.0 bits (227), Expect = 7e-18
Identities = 90/332 (27%), Positives = 147/332 (44%), Gaps = 80/332 (24%)
Query: 758 PSLLRGTLRIYQKQGLNWLASLYNNKTNG-ILADEMGLGKTIQTISL------------- 803
P+ L+ L ++QKQ L WL + K G ILAD+MGLGKT+ I+L
Sbjct: 563 PAGLKVPLLLHQKQALAWLLWRESQKPQGGILADDMGLGKTLTMIALILTQKNQEKKEEK 622
Query: 804 -----LAYLA----CEKENWGPHLIVVPTSVLLNWEMEFKRFAPGFKVLTY-YGSPQQRR 853
L +L+ C+ + G LI+ P S++ +W+ E ++ K+ Y Y P +
Sbjct: 623 EKSTALTWLSKDDSCDFTSHGT-LIICPASLIHHWKNEVEKRVNSNKLRVYLYHGPNRDS 681
Query: 854 EKRKGWNKPDAFHVCITSYQLVVHDQHSFKRKK--------------------WQYMILD 893
R + + IT+Y LV + + K++ W +ILD
Sbjct: 682 RARV----LSTYDIVITTYSLVAKEIPTNKQEAEIPGANLNVEGTSTPLLRIAWARIILD 737
Query: 894 EAHNIKNFRSTRWQALLNFNTERRLLLTGTPLQNNLAELWSLLYFLMPQTALENGKVSGF 953
EAHN+KN R A+ R +TGTP+QNNL +++SLL FL + S F
Sbjct: 738 EAHNVKNPRVQTSIAVCKLQACARWAVTGTPIQNNLLDMYSLLKFL---------RCSPF 788
Query: 954 ADLDAFQQWFGRPVDKIVETGENYEQDEETKKTVSKLHQVLRPYLLRRLKADVEKQ---- 1009
D F W + D +KK +L + + LLRR K ++
Sbjct: 789 ---DEFNLW-------------RSQVDNGSKKGGERLSILTKSLLLRRTKDQLDSTGRPL 832
Query: 1010 --MPGKYEHIIYCRLSKRQRFLYDDFMSRAQT 1039
+P + + + +LS+ + +Y+ F +R+++
Sbjct: 833 VILPQRKFQLHHLKLSEDEETVYNVFFARSRS 864
>Hs21071052 [KL] KOG1001 Helicase-like transcription factor HLTF/DNA helicase
RAD5 DEAD-box superfamily
Length = 1009
Score = 97.1 bits (240), Expect = 2e-19
Identities = 49/130 (37%), Positives = 78/130 (59%), Gaps = 6/130 (4%)
Query: 1328 RALIFTQMTKVLDILEQFLNFHGYLYMRLDGAT----KIEDRQILTERFNSDPRITVFIL 1383
++L+ +Q T L ++E L G+++ RLDG+ ++E Q P T+ +L
Sbjct: 853 KSLVVSQFTTFLSLIEIPLKASGFVFTRLDGSMAQKKRVESIQCFQNTEAGSP--TIMLL 910
Query: 1384 SSRSGGLGINLTGADTVIFYDSDWNPAMDKQCQDRCHRIGQTRDVHIYRFVSDHTIESNI 1443
S ++GG+G+NL+ A V D WNPA + QC DRCHR+GQ ++V I +F+ ++E N+
Sbjct: 911 SLKAGGVGLNLSAASRVFLMDPAWNPAAEDQCFDRCHRLGQKQEVIITKFIVKDSVEENM 970
Query: 1444 LKKANQKRHL 1453
LK N+KR L
Sbjct: 971 LKIQNKKREL 980
Score = 95.1 bits (235), Expect = 8e-19
Identities = 76/269 (28%), Positives = 128/269 (47%), Gaps = 51/269 (18%)
Query: 818 LIVVPTSVLLNWEMEFKRFAPG---FKVLTYYGSPQQRREKRKGWNKPDAFHVCITSYQL 874
LI+ P SVL NW +F + YYG P + RE +K D + +T+Y +
Sbjct: 479 LIICPLSVLSNWIDQFGQHIKSDVHLNFYVYYG-PDRIREPAL-LSKQD---IVLTTYNI 533
Query: 875 VVHDQ--------HSFKRKKWQYMILDEAHNIKNFRSTRWQALLNFNTERRLLLTGTPLQ 926
+ HD HS + W +ILDE H I+N + + +A+L+ +ERR +LTGTP+Q
Sbjct: 534 LTHDYGTKGDSPLHSIR---WLRVILDEGHAIRNPNAQQTKAVLDLESERRWVLTGTPIQ 590
Query: 927 NNLAELWSLLYFLMPQTALENGKVSGFADLDAFQQWFGRPVDKIVETGENYEQDEETKKT 986
N+L +LWSLL FL K+ F D ++W+ R + + V G+ +
Sbjct: 591 NSLKDLWSLLSFL---------KLKPFID----REWWHRTIQRPVTMGD--------EGG 629
Query: 987 VSKLHQVLRPYLLRRLKADVEK-----QMPGKYEHIIYCRLSKRQRFLYDDFMSRAQT-- 1039
+ +L +++ LRR K K ++P + I + LS +R +Y + +
Sbjct: 630 LRRLQSLIKNITLRRTKTSKIKGKPVLELPERKVFIQHITLSDEERKIYQSVKNEGRATI 689
Query: 1040 ----KETLASGNFMSIINCLMQLRKVCNH 1064
E ++ ++ L++LR++C H
Sbjct: 690 GRYFNEGTVLAHYADVLGLLLRLRQICCH 718
>7298963 [KL] KOG4439 RNA polymerase II transcription termination factor
TTF2/lodestar DEAD-box superfamily
Length = 1061
Score = 96.7 bits (239), Expect = 3e-19
Identities = 95/361 (26%), Positives = 155/361 (42%), Gaps = 87/361 (24%)
Query: 732 DEKAETTESVTSPAAADPLAVSDVPVPSLL-------RGTLRIYQKQGLNWLASLYNN-K 783
++KA T ES+ +++ D+P P +L + +L +QK L W++
Sbjct: 403 NQKALTLESLKDLH----VSLEDLPGPEVLAEDPVGLKVSLMNHQKHALAWMSWRERKLP 458
Query: 784 TNGILADEMGLGKTIQTISLLAYLACEK---------------------------ENW-- 814
GILAD+MGLGKT+ IS + LAC+ W
Sbjct: 459 RGGILADDMGLGKTLTMIS--SVLACKNGQEMSEGKDESSDSDSEDDKNKKRKSVTGWKS 516
Query: 815 --------GPHLIVVPTSVLLNWEMEFKRFAPGFKVLTYYGSPQQRREKRKGWNKPDAFH 866
G L+V P S+L WE E + K+ R K K D
Sbjct: 517 KGRKDTRRGGTLVVCPASLLRQWESEVESKVSRQKLTVCVHHGNNRETKGKYLRDYD--- 573
Query: 867 VCITSYQLVVHDQHSFKRK---KWQYMILDEAHNIKNFRSTRWQALLNFNTERRLLLTGT 923
+ +T+YQ+V + S KW+ +ILDEAH ++N +S A+ + + R LTGT
Sbjct: 574 IVVTTYQIVAREHKSLSAVFGVKWRRIILDEAHVVRNHKSQSSLAVCDLRGKYRWALTGT 633
Query: 924 PLQNNLAELWSLLYFLMPQTALENGKVSGFADLDAFQQWFGRPVDKIVETGENYEQDEET 983
P+QN ++++LL FL + S F DL +++W +D G+N
Sbjct: 634 PIQNKELDVYALLKFL---------RCSPFDDLHTWKKW----IDNKSAGGQN------- 673
Query: 984 KKTVSKLHQVLRPYLLRRLKADVE-----KQMPGKYEHIIYCRLSKRQRFLYDDFMSRAQ 1038
+L+ +++ +LRR KA ++ +P K +I L K + +Y M+ ++
Sbjct: 674 -----RLNLLMKSLMLRRTKAQLQSDGKLNSLPNKELRLIEISLDKEEMNVYQTVMTYSR 728
Query: 1039 T 1039
T
Sbjct: 729 T 729
Score = 94.4 bits (233), Expect = 1e-18
Identities = 54/152 (35%), Positives = 90/152 (58%), Gaps = 5/152 (3%)
Query: 1328 RALIFTQMTKVLDILEQFLNFHGYLYMRLDGATKIEDRQILTERFNS-DPRITVFILSSR 1386
+A++ +Q T VLDIL L+ G + L+G +++RQ + FN + + V +LS
Sbjct: 910 KAIVVSQWTSVLDILRDHLSKDGVATLSLNGTIPVKNRQDIVNEFNDRNNQKRVLLLSLT 969
Query: 1387 SGGLGINLTGADTVIFYDSDWNPAMDKQCQDRCHRIGQTRDVHIYRFVSDHTIESNILKK 1446
+GG+G+NL GA+ ++ D WNP ++ Q QDR +R+GQ ++V IY+F+ T+E I
Sbjct: 970 AGGVGLNLIGANHLLLLDLHWNPQLEAQAQDRIYRVGQKKNVIIYKFMCVDTVEQRIKGL 1029
Query: 1447 ANQKRHLDNVVIQTGDFTTDYFTKLSVKDLLG 1478
++K L + V+ TG +KL++ DL G
Sbjct: 1030 QDKKLDLADGVL-TG---AKVSSKLTIDDLKG 1057
>Hs20538502 [R] KOG1016 Predicted DNA helicase DEAD-box superfamily
Length = 1359
Score = 96.3 bits (238), Expect = 3e-19
Identities = 58/181 (32%), Positives = 94/181 (51%), Gaps = 21/181 (11%)
Query: 1326 GHRALIFTQMTKVLDILEQFLN------------------FHGYLYMRLDGATKIEDRQI 1367
G + L+F+Q L ++E+FL Y RLDG+T +R+
Sbjct: 629 GDKILVFSQSLSTLALIEEFLGKREVPCPPGTEGQGAQKWVRNISYFRLDGSTPAFERER 688
Query: 1368 LTERFNSDPRIT--VFILSSRSGGLGINLTGADTVIFYDSDWNPAMDKQCQDRCHRIGQT 1425
L +FN +T +F+LS+R+G LG+NL GA+ V+ +D+ WNP D Q R +R GQ
Sbjct: 689 LINQFNDPSNLTTWLFLLSTRAGCLGVNLIGANRVVVFDASWNPCHDAQAVCRVYRYGQK 748
Query: 1426 RDVHIYRFVSDHTIESNILKKANQKRHLDNVVIQTGDFTTDYFTKLSVKDLLGAEAPEDI 1485
+ +IYR V+D+T+E I + K+ + + V+ + + FT+ V++LL E
Sbjct: 749 KPCYIYRLVADYTLEKKIYDRQISKQGMSDRVVDDLNPMLN-FTRKEVENLLHFVEKEPA 807
Query: 1486 P 1486
P
Sbjct: 808 P 808
Score = 83.2 bits (204), Expect = 3e-15
Identities = 60/180 (33%), Positives = 91/180 (50%), Gaps = 14/180 (7%)
Query: 890 MILDEAHNIKNFRSTRWQALLNFNTERRLLLTGTPLQNNLAELWSLLYFLMPQTALENGK 949
+I DE H IKN +++ QAL N + RR++LTG PLQNNL E W ++ F+ P
Sbjct: 352 VICDEGHRIKNCQASTSQALKNIRSRRRVVLTGYPLQNNLIEYWCMVDFVRPDF------ 405
Query: 950 VSGFADLDAFQQWFGRPVDKIVETGENYEQDEETKKTVSK-LHQVLRPYLLRRLKADVEK 1008
F F RP+ + ++ QD + S LH +L ++ RR ++
Sbjct: 406 ---LGTRQEFSNMFERPILN-GQCIDSTPQDVRLMRYRSHVLHSLLEGFVQRRGHTVLKI 461
Query: 1009 QMPGKYEHIIYCRLSKRQRFLYDDFMSRAQTKETLASGNF-MSIINCLMQLRKVCNHPDL 1067
+P K E++I RLSK QR LY FM R ++ +SG ++ + K+ NHPD+
Sbjct: 462 HLPAKEENVILVRLSKIQRDLYTQFMDR--FRDCGSSGWLGLNPLKAFCVCCKIWNHPDV 519
>7301343 [K] KOG1015 Transcription regulator XNP/ATRX DEAD-box superfamily
Length = 1311
Score = 95.9 bits (237), Expect = 5e-19
Identities = 87/311 (27%), Positives = 141/311 (44%), Gaps = 49/311 (15%)
Query: 787 ILADEMGLGKTIQTISLLAYLACEKENWGPH--LIVVPTSVLLNWEMEFK---RFAPGFK 841
ILA MGLGKT+Q ++L L G LI+ P S + NW EF +FA
Sbjct: 486 ILAHCMGLGKTLQVVTLSHTLLVNTRRTGVDRVLIISPLSTVNNWAREFTSWMKFANRND 545
Query: 842 VLTY----YGSPQQRREKRKGWNKPDAFHVCITSY---QLVVHDQHSFKRKKWQYMIL-- 892
+ Y Y R K W VCI Y +++ +++ RKK + ++
Sbjct: 546 IEVYDISRYKDKPTRIFKLNEWFNEGG--VCILGYDMYRILANEKAKGLRKKQREQLMQA 603
Query: 893 -----------DEAHNIKNFRSTRWQALLNFNTERRLLLTGTPLQNNLAELWSLLYFLMP 941
DE H +KN +++ +A+ T+RR++LTGTPLQNNL E + ++ F+ P
Sbjct: 604 LVDPGPDLVVCDEGHLLKNEKTSISKAVTRMRTKRRIVLTGTPLQNNLREYYCMIQFVKP 663
Query: 942 QTALENGKVSGFADLDAFQQWFGRPVDKIVETGENYEQDEETKKTVSK-----LHQVLRP 996
L ++++ R V+ I T Y E + K LH++L
Sbjct: 664 NL------------LGTYKEYMNRFVNPI--TNGQYTDSTERDLRLMKHRSHILHKLLEG 709
Query: 997 YLLRRLKADVEKQMPGKYEHIIYCRLSKRQRFLYDDFMS--RAQTKETLASGNFMSIINC 1054
+ RR + + +P K+E+++Y LS+ Q+ LY +M+ R Q+ + G +
Sbjct: 710 CIQRRDYSVLAPYLPPKHEYVVYTTLSELQQKLYGYYMTTHREQSGGDVV-GKGARLFQD 768
Query: 1055 LMQLRKVCNHP 1065
LR++ HP
Sbjct: 769 FQDLRRIWTHP 779
Score = 92.0 bits (227), Expect = 7e-18
Identities = 55/170 (32%), Positives = 88/170 (51%), Gaps = 29/170 (17%)
Query: 1326 GHRALIFTQMTKVLDILEQFLNF----------------------HGYLYMRLDGATKIE 1363
G + L+F+Q + LD++E FL+ G Y RLDG+ +E
Sbjct: 914 GDKLLVFSQSLQSLDVIEHFLSLVDSNTKNYEFEGDVGDFKGCWTSGKDYFRLDGSCSVE 973
Query: 1364 DRQILTERFNS--DPRITVFILSSRSGGLGINLTGADTVIFYDSDWNPAMDKQCQDRCHR 1421
R+ + ++FN+ + R +F++S+R+GGLGINL A+ V+ +D WNP+ D Q R +R
Sbjct: 974 QREAMCKQFNNITNLRARLFLISTRAGGLGINLVAANRVVIFDVSWNPSHDTQSIFRVYR 1033
Query: 1422 IGQTRDVHIYRFVSDHTIES-----NILKKANQKRHLDNVVIQTGDFTTD 1466
GQ + +IYR ++ T+E + K+A KR +D I TD
Sbjct: 1034 FGQIKPCYIYRLIAMGTMEQKVYERQVAKQATAKRVIDEQQISRHYNQTD 1083
>At1g50410 [KL] KOG1001 Helicase-like transcription factor HLTF/DNA helicase
RAD5 DEAD-box superfamily
Length = 1056
Score = 94.0 bits (232), Expect = 2e-18
Identities = 56/150 (37%), Positives = 82/150 (54%), Gaps = 3/150 (2%)
Query: 1328 RALIFTQMTKVLDILEQFLNFHGYLYMRLDGATKIEDRQILTERFNSDPRITVFILSSRS 1387
+ +IF+Q T +LD++E L + + RLDG + R + F++DP + V I+S ++
Sbjct: 903 KTIIFSQWTGMLDLVELSLIENSIEFRRLDGTMSLIARDRAVKEFSNDPDVKVMIMSLKA 962
Query: 1388 GGLGINLTGADTVIFYDSDWNPAMDKQCQDRCHRIGQTRDVHIYRFVSDHTIESNILKKA 1447
G LG+N+ A VI D WNP + Q DR HRIGQTR V + R +T+E IL
Sbjct: 963 GNLGLNMIAACHVILLDLWWNPTTEDQAIDRAHRIGQTRPVTVTRITIKNTVEDRILALQ 1022
Query: 1448 NQKRHLDNVVIQTG-DFTTDYFTKLSVKDL 1476
+KR + V G D T+L+V DL
Sbjct: 1023 EEKRKM--VASAFGEDHGGSSATRLTVDDL 1050
Score = 67.4 bits (163), Expect = 2e-10
Identities = 56/201 (27%), Positives = 90/201 (43%), Gaps = 32/201 (15%)
Query: 878 DQHSFKRKKWQYMILDEAHNIKNFRSTRWQALLNFNTERRLLLTGTPLQNNLAELWSLLY 937
D + + W ++LDEA IKN R+ +A +RR L+GTP+QN + +L+S
Sbjct: 537 DSGTLAKVGWFRVVLDEAQTIKNHRTQVARACCGLRAKRRWCLSGTPIQNTIDDLYSYFR 596
Query: 938 FLMPQTALENGKVSGFADLDAFQQWFGRPVDKIVETGENYEQDEETKKTVSKLHQVLRPY 997
FL K +A +F P+ + + + KL VLR
Sbjct: 597 FL---------KYDPYAVYKSFCHQIKGPISR------------NSLQGYKKLQAVLRAI 635
Query: 998 LLRRLKADVEK-----QMPGKYEHIIYCRLSKRQRFLYD--DFMSRAQTKETLASG---- 1046
+LRR K + +P K ++ S +R Y + SR+Q K A+G
Sbjct: 636 MLRRTKGTLLDGQPIINLPPKTINLSQVDFSVEERSFYVKLESDSRSQFKAYAAAGTLNQ 695
Query: 1047 NFMSIINCLMQLRKVCNHPDL 1067
N+ +I+ L++LR+ C+HP L
Sbjct: 696 NYANILLMLLRLRQACDHPQL 716
>At5g05130 [KL] KOG1001 Helicase-like transcription factor HLTF/DNA helicase
RAD5 DEAD-box superfamily
Length = 881
Score = 92.8 bits (229), Expect = 4e-18
Identities = 48/131 (36%), Positives = 81/131 (61%), Gaps = 4/131 (3%)
Query: 1328 RALIFTQMTKVLDILEQFLNFHGYLYMRLDGATKIEDRQILTERFNSDPRIT---VFILS 1384
++++F+Q K+L +LE L G+ +RLDGA ++ R + F + P +T V + S
Sbjct: 727 KSVVFSQFRKMLLLLETPLKAAGFTILRLDGAMTVKKRTQVIGEFGN-PELTGPVVLLAS 785
Query: 1385 SRSGGLGINLTGADTVIFYDSDWNPAMDKQCQDRCHRIGQTRDVHIYRFVSDHTIESNIL 1444
++ G GINLT A V +D WNPA+++Q DR HRIGQ ++V + R ++ ++IE +L
Sbjct: 786 LKASGTGINLTAASRVYLFDPWWNPAVEEQAMDRIHRIGQKQEVKMIRMIARNSIEERVL 845
Query: 1445 KKANQKRHLDN 1455
+ +K++L N
Sbjct: 846 ELQQKKKNLAN 856
Score = 90.1 bits (222), Expect = 2e-17
Identities = 76/282 (26%), Positives = 129/282 (44%), Gaps = 40/282 (14%)
Query: 818 LIVVPTSVLLNWEMEFKRFA-PGF-KVLTYYGSPQQRREKRKGWNKPDAFHVCITSYQLV 875
LIV P SV+ W + + PG KV Y+G E+ N+ + + +T+Y +
Sbjct: 361 LIVCPPSVISAWITQLEEHTVPGILKVYMYHGG-----ERTDDVNELMKYDIVLTTYGTL 415
Query: 876 VHDQH----SFKRKKWQYMILDEAHNIKNFRSTRWQALLNFNTERRLLLTGTPLQNNLAE 931
++ K+ +W +ILDEAH IKN + + + + RR +TGTP+QN +
Sbjct: 416 AVEESWEDSPVKKMEWLRIILDEAHTIKNANAQQSRVVCKLKASRRWAVTGTPIQNGSFD 475
Query: 932 LWSLLYFLMPQTALENGKVSGFADLDAFQQWFGRPVDKIVETGENYEQDEETKKTVSKLH 991
L+SL+ FL + F+ +Q RP+ + KK +S+L
Sbjct: 476 LYSLMAFL---------RFEPFSIKSYWQSLIQRPL------------GQGNKKGLSRLQ 514
Query: 992 QVLRPYLLRRLKADVEKQMPGKYEHIIYCRLSKRQRFLYDDFMSRAQ--TKETLASG--- 1046
++ LRR K +P K Y LS +R LYD A+ + + +G
Sbjct: 515 VLMATISLRRTKEKSLIGLPPKTVETCYVELSPEERQLYDHMEGEAKGVVQNLINNGSLM 574
Query: 1047 -NFMSIINCLMQLRKVCNHPDLF--EVRPILTSFCIEDSVSK 1085
N+ ++++ +++LR++C+ L E+R TS +ED K
Sbjct: 575 RNYSTVLSIILRLRQLCDDMSLCPPELRSFTTSTSVEDVTDK 616
>At1g02670 [L] KOG1002 Nucleotide excision repair protein RAD16
Length = 678
Score = 92.8 bits (229), Expect = 4e-18
Identities = 49/149 (32%), Positives = 78/149 (51%), Gaps = 2/149 (1%)
Query: 1328 RALIFTQMTKVLDILEQFLNFHGYLYMRLDGATKIEDRQILTERFNSDPRITVFILSSRS 1387
+A++F+Q T LD++ L G ++L G+ + + F +P V ++S ++
Sbjct: 527 KAIVFSQFTSFLDLISYALGKSGVSCVQLVGSMSKAAKDAALKNFKEEPDCRVLLMSLQA 586
Query: 1388 GGLGINLTGADTVIFYDSDWNPAMDKQCQDRCHRIGQTRDVHIYRFVSDHTIESNILKKA 1447
GG+ +NLT A V D WNPA+++Q QDR HRIGQ + V + RF+ + T+E IL
Sbjct: 587 GGVALNLTAASHVFMMDPWWNPAVERQAQDRIHRIGQCKPVRVVRFIMEKTVEEKILTLQ 646
Query: 1448 NQKRHLDNVVIQTGDFTTDYFTKLSVKDL 1476
+K L + GD KL D+
Sbjct: 647 KKKEDLFESTL--GDSEEAVVQKLGEDDI 673
Score = 88.6 bits (218), Expect = 7e-17
Identities = 77/243 (31%), Positives = 115/243 (46%), Gaps = 38/243 (15%)
Query: 721 PSPPKSDNELKDEKAETTE--------SVTSPAAADPLAVSDVPVPSLLRGTLRIYQKQG 772
P+ K ++ EK + TE +V + AA PL D+ +P L YQK+
Sbjct: 91 PANTKRKWQIMKEKVQMTEDDDFDEQNAVIAEAAEQPL---DLIIPLLK------YQKEF 141
Query: 773 LNWLA-SLYNNKTNGILADEMGLGKTIQTISLLAYL-----ACEKENWGPHLIVVPTSVL 826
L W + GILADEMG+GKTIQ ISL+ A +E G L++VP L
Sbjct: 142 LAWATIQELSAVRGGILADEMGMGKTIQAISLVLARREVDRAKSREAVGHTLVLVPPVAL 201
Query: 827 LNWEMEFKRF-APGFKVLTYYGSPQQRREKRKGWNKPDAFHVCITSYQLVVHDQHS---- 881
W E R +PG + Y P++ + +K N + +T+ +V ++
Sbjct: 202 SQWLDEISRLTSPGSTRVLQYHGPKRDKNVQKLMN----YDFVLTTSPIVENEYRKDEGV 257
Query: 882 ------FKRKKWQYMILDEAHNIKNFRSTRWQALLNFNTERRLLLTGTPLQNNLAELWSL 935
KW +I+DEAH+IKN S +A+ R L+GTPLQN++ EL+SL
Sbjct: 258 DETMSPLHSIKWNRIIVDEAHDIKNRSSRTAKAVFALEATYRWALSGTPLQNDVDELYSL 317
Query: 936 LYF 938
+ +
Sbjct: 318 VSY 320
>CE11083 [KL] KOG4439 RNA polymerase II transcription termination factor
TTF2/lodestar DEAD-box superfamily
Length = 1091
Score = 92.0 bits (227), Expect = 7e-18
Identities = 50/150 (33%), Positives = 84/150 (55%), Gaps = 3/150 (2%)
Query: 1328 RALIFTQMTKVLDILEQFLNFHGYLYMRLDGATKIEDRQILTERFNSDPR-ITVFILSSR 1386
+ +I +Q T VL+++E + G+ Y + G ++DRQ + FN + V +LS
Sbjct: 935 KVVIVSQWTSVLNLIEIHIKSSGFKYTSITGQVLVKDRQERVDSFNREKGGARVMLLSLA 994
Query: 1387 SGGLGINLTGADTVIFYDSDWNPAMDKQCQDRCHRIGQTRDVHIYRFVSDHTIESNILKK 1446
+GG+G+NLTG + ++ D WNPA+++Q DR +R+GQ +DV I+R V+ TIE ++
Sbjct: 995 AGGVGLNLTGGNHLVMVDLHWNPALEQQAFDRIYRMGQKKDVFIHRLVTKGTIEQRVVML 1054
Query: 1447 ANQKRHLDNVVIQTGDFTTDYFTKLSVKDL 1476
K L + V+ T KL+ D+
Sbjct: 1055 QKDKVALASSVLDGN--ATRKMNKLTTADI 1082
>At3g20010 [KL] KOG1001 Helicase-like transcription factor HLTF/DNA helicase
RAD5 DEAD-box superfamily
Length = 1047
Score = 92.0 bits (227), Expect = 7e-18
Identities = 47/124 (37%), Positives = 69/124 (54%)
Query: 1328 RALIFTQMTKVLDILEQFLNFHGYLYMRLDGATKIEDRQILTERFNSDPRITVFILSSRS 1387
+ +IF+Q T +LD++E + G + RLDG + R + F+ P + V ++S ++
Sbjct: 894 KTIIFSQWTGMLDLVELRILESGIEFRRLDGTMSLAARDRAVKEFSKKPDVKVMLMSLKA 953
Query: 1388 GGLGINLTGADTVIFYDSDWNPAMDKQCQDRCHRIGQTRDVHIYRFVSDHTIESNILKKA 1447
G LG+N+ A VI D WNP + Q DR HRIGQTR V + R T+E ILK
Sbjct: 954 GNLGLNMVAACHVILLDLWWNPTTEDQAIDRAHRIGQTRPVTVTRITIKDTVEDRILKLQ 1013
Query: 1448 NQKR 1451
+KR
Sbjct: 1014 EEKR 1017
Score = 65.9 bits (159), Expect = 5e-10
Identities = 53/192 (27%), Positives = 89/192 (45%), Gaps = 32/192 (16%)
Query: 887 WQYMILDEAHNIKNFRSTRWQALLNFNTERRLLLTGTPLQNNLAELWSLLYFLMPQTALE 946
W ++LDEA IKN+R+ ++ +RR L+GTP+QN + +L+S FL
Sbjct: 542 WFRIVLDEAQTIKNYRTQMARSCCTLRAKRRWCLSGTPIQNTIDDLYSYFRFL------- 594
Query: 947 NGKVSGFADLDAFQQWFGRPVDKIVETGENYEQDEETKKTVSKLHQVLRPYLLRRLKADV 1006
+ +A +F P+ + + + Y+ KL VLR +LRR K +
Sbjct: 595 --RYDPYAVYKSFYSTIKVPISR--NSCQGYK----------KLQAVLRAIMLRRTKGTL 640
Query: 1007 EK-----QMPGKYEHIIYCRLSKRQRFLYD--DFMSRAQTKETLASG----NFMSIINCL 1055
+P K ++ S +R Y + SR+Q K +G N+ +I+ L
Sbjct: 641 LDGKPIINLPPKVVNLSQVDFSVAERSFYKKLEADSRSQFKAYADAGTLSQNYANILLLL 700
Query: 1056 MQLRKVCNHPDL 1067
++LR+ C+HP L
Sbjct: 701 LRLRQACDHPQL 712
>SPAC11E3.01c [R] KOG0391 SNF2 family DNA-dependent ATPase
Length = 193
Score = 91.7 bits (226), Expect = 9e-18
Identities = 41/61 (67%), Positives = 52/61 (85%)
Query: 1416 QDRCHRIGQTRDVHIYRFVSDHTIESNILKKANQKRHLDNVVIQTGDFTTDYFTKLSVKD 1475
QDR HRIGQTRDVHIYR +S++T+ESN+L++ANQKR LD +VIQ G+FTT++F K V D
Sbjct: 2 QDRSHRIGQTRDVHIYRLISEYTVESNMLRRANQKRMLDKIVIQGGEFTTEWFRKADVLD 61
Query: 1476 L 1476
L
Sbjct: 62 L 62
>Hs20336209 [K] KOG1015 Transcription regulator XNP/ATRX DEAD-box superfamily
Length = 2492
Score = 91.7 bits (226), Expect = 9e-18
Identities = 73/272 (26%), Positives = 124/272 (44%), Gaps = 35/272 (12%)
Query: 787 ILADEMGLGKTIQTISLL-AYLACEKENWGPHLIVVPTSVLLNWEMEFKRFAPGFK---- 841
ILA MGLGKT+Q +S L L C+K ++ L+V P + LNW EF+++ G K
Sbjct: 1591 ILAHCMGLGKTLQVVSFLHTVLLCDKLDFSTALVVCPLNTALNWMNEFEKWQEGLKDDEK 1650
Query: 842 ----VLTYYGSPQQRREKRKGWNKPDAFHVCITSYQLV--VHDQHSFKRKKWQ------- 888
L PQ+R + W + V I Y++ + + K +K +
Sbjct: 1651 LEVSELATVKRPQERSYMLQRWQEDGG--VMIIGYEMYRNLAQGRNVKSRKLKEIFNKAL 1708
Query: 889 ------YMILDEAHNIKNFRSTRWQALLNFNTERRLLLTGTPLQNNLAELWSLLYFLMPQ 942
+++ DE H +KN S +A+ + + RR++LTGTPLQNNL E ++ F+
Sbjct: 1709 VDPGPDFVVCDEGHILKNEASAVSKAMNSIRSRRRIILTGTPLQNNLIEYHCMVNFI--- 1765
Query: 943 TALENGKVSGFADLDAFQQWFGRPVDKIVETGENYEQDEETKKTVSKLHQVLRPYLLRRL 1002
K + + F+ F P+ KK L+++L + R+
Sbjct: 1766 ------KENLLGSIKEFRNRFINPIQNGQCADSTMVDVRVMKKRAHILYEMLAGCVQRKD 1819
Query: 1003 KADVEKQMPGKYEHIIYCRLSKRQRFLYDDFM 1034
+ K +P K+E+++ R++ Q LY ++
Sbjct: 1820 YTALTKFLPPKHEYVLAVRMTSIQCKLYQYYL 1851
Score = 91.3 bits (225), Expect = 1e-17
Identities = 56/174 (32%), Positives = 87/174 (49%), Gaps = 28/174 (16%)
Query: 1326 GHRALIFTQMTKVLDILEQFLNF----------------------HGYLYMRLDGATKIE 1363
G + L+F+Q LD++E FL Y RLDG+T +
Sbjct: 2034 GDKVLVFSQSLISLDLIEDFLELASREKTEDKDKPLIYKGEGKWLRNIDYYRLDGSTTAQ 2093
Query: 1364 DRQILTERFNSDPRIT--VFILSSRSGGLGINLTGADTVIFYDSDWNPAMDKQCQDRCHR 1421
R+ E FN + + +FI+S+++G LGINL A+ VI +D+ WNP+ D Q R +R
Sbjct: 2094 SRKKWAEEFNDETNVRGRLFIISTKAGSLGINLVAANRVIIFDASWNPSYDIQSIFRVYR 2153
Query: 1422 IGQTRDVHIYRFVSDHTIESNILKKANQKRHLDNVVIQTGD----FTTDYFTKL 1471
GQT+ V++YRF++ T+E I + K+ L V+ FT + T+L
Sbjct: 2154 FGQTKPVYVYRFLAQGTMEDKIYDRQVTKQSLSFRVVDQQQVERHFTMNELTEL 2207
>Hs20336207 [K] KOG1015 Transcription regulator XNP/ATRX DEAD-box superfamily
Length = 2288
Score = 91.7 bits (226), Expect = 9e-18
Identities = 73/272 (26%), Positives = 124/272 (44%), Gaps = 35/272 (12%)
Query: 787 ILADEMGLGKTIQTISLL-AYLACEKENWGPHLIVVPTSVLLNWEMEFKRFAPGFK---- 841
ILA MGLGKT+Q +S L L C+K ++ L+V P + LNW EF+++ G K
Sbjct: 1387 ILAHCMGLGKTLQVVSFLHTVLLCDKLDFSTALVVCPLNTALNWMNEFEKWQEGLKDDEK 1446
Query: 842 ----VLTYYGSPQQRREKRKGWNKPDAFHVCITSYQLV--VHDQHSFKRKKWQ------- 888
L PQ+R + W + V I Y++ + + K +K +
Sbjct: 1447 LEVSELATVKRPQERSYMLQRWQEDGG--VMIIGYEMYRNLAQGRNVKSRKLKEIFNKAL 1504
Query: 889 ------YMILDEAHNIKNFRSTRWQALLNFNTERRLLLTGTPLQNNLAELWSLLYFLMPQ 942
+++ DE H +KN S +A+ + + RR++LTGTPLQNNL E ++ F+
Sbjct: 1505 VDPGPDFVVCDEGHILKNEASAVSKAMNSIRSRRRIILTGTPLQNNLIEYHCMVNFI--- 1561
Query: 943 TALENGKVSGFADLDAFQQWFGRPVDKIVETGENYEQDEETKKTVSKLHQVLRPYLLRRL 1002
K + + F+ F P+ KK L+++L + R+
Sbjct: 1562 ------KENLLGSIKEFRNRFINPIQNGQCADSTMVDVRVMKKRAHILYEMLAGCVQRKD 1615
Query: 1003 KADVEKQMPGKYEHIIYCRLSKRQRFLYDDFM 1034
+ K +P K+E+++ R++ Q LY ++
Sbjct: 1616 YTALTKFLPPKHEYVLAVRMTSIQCKLYQYYL 1647
Score = 91.3 bits (225), Expect = 1e-17
Identities = 56/174 (32%), Positives = 87/174 (49%), Gaps = 28/174 (16%)
Query: 1326 GHRALIFTQMTKVLDILEQFLNF----------------------HGYLYMRLDGATKIE 1363
G + L+F+Q LD++E FL Y RLDG+T +
Sbjct: 1830 GDKVLVFSQSLISLDLIEDFLELASREKTEDKDKPLIYKGEGKWLRNIDYYRLDGSTTAQ 1889
Query: 1364 DRQILTERFNSDPRIT--VFILSSRSGGLGINLTGADTVIFYDSDWNPAMDKQCQDRCHR 1421
R+ E FN + + +FI+S+++G LGINL A+ VI +D+ WNP+ D Q R +R
Sbjct: 1890 SRKKWAEEFNDETNVRGRLFIISTKAGSLGINLVAANRVIIFDASWNPSYDIQSIFRVYR 1949
Query: 1422 IGQTRDVHIYRFVSDHTIESNILKKANQKRHLDNVVIQTGD----FTTDYFTKL 1471
GQT+ V++YRF++ T+E I + K+ L V+ FT + T+L
Sbjct: 1950 FGQTKPVYVYRFLAQGTMEDKIYDRQVTKQSLSFRVVDQQQVERHFTMNELTEL 2003
>Hs20336205 [K] KOG1015 Transcription regulator XNP/ATRX DEAD-box superfamily
Length = 2454
Score = 91.7 bits (226), Expect = 9e-18
Identities = 73/272 (26%), Positives = 124/272 (44%), Gaps = 35/272 (12%)
Query: 787 ILADEMGLGKTIQTISLL-AYLACEKENWGPHLIVVPTSVLLNWEMEFKRFAPGFK---- 841
ILA MGLGKT+Q +S L L C+K ++ L+V P + LNW EF+++ G K
Sbjct: 1553 ILAHCMGLGKTLQVVSFLHTVLLCDKLDFSTALVVCPLNTALNWMNEFEKWQEGLKDDEK 1612
Query: 842 ----VLTYYGSPQQRREKRKGWNKPDAFHVCITSYQLV--VHDQHSFKRKKWQ------- 888
L PQ+R + W + V I Y++ + + K +K +
Sbjct: 1613 LEVSELATVKRPQERSYMLQRWQEDGG--VMIIGYEMYRNLAQGRNVKSRKLKEIFNKAL 1670
Query: 889 ------YMILDEAHNIKNFRSTRWQALLNFNTERRLLLTGTPLQNNLAELWSLLYFLMPQ 942
+++ DE H +KN S +A+ + + RR++LTGTPLQNNL E ++ F+
Sbjct: 1671 VDPGPDFVVCDEGHILKNEASAVSKAMNSIRSRRRIILTGTPLQNNLIEYHCMVNFI--- 1727
Query: 943 TALENGKVSGFADLDAFQQWFGRPVDKIVETGENYEQDEETKKTVSKLHQVLRPYLLRRL 1002
K + + F+ F P+ KK L+++L + R+
Sbjct: 1728 ------KENLLGSIKEFRNRFINPIQNGQCADSTMVDVRVMKKRAHILYEMLAGCVQRKD 1781
Query: 1003 KADVEKQMPGKYEHIIYCRLSKRQRFLYDDFM 1034
+ K +P K+E+++ R++ Q LY ++
Sbjct: 1782 YTALTKFLPPKHEYVLAVRMTSIQCKLYQYYL 1813
Score = 91.3 bits (225), Expect = 1e-17
Identities = 56/174 (32%), Positives = 87/174 (49%), Gaps = 28/174 (16%)
Query: 1326 GHRALIFTQMTKVLDILEQFLNF----------------------HGYLYMRLDGATKIE 1363
G + L+F+Q LD++E FL Y RLDG+T +
Sbjct: 1996 GDKVLVFSQSLISLDLIEDFLELASREKTEDKDKPLIYKGEGKWLRNIDYYRLDGSTTAQ 2055
Query: 1364 DRQILTERFNSDPRIT--VFILSSRSGGLGINLTGADTVIFYDSDWNPAMDKQCQDRCHR 1421
R+ E FN + + +FI+S+++G LGINL A+ VI +D+ WNP+ D Q R +R
Sbjct: 2056 SRKKWAEEFNDETNVRGRLFIISTKAGSLGINLVAANRVIIFDASWNPSYDIQSIFRVYR 2115
Query: 1422 IGQTRDVHIYRFVSDHTIESNILKKANQKRHLDNVVIQTGD----FTTDYFTKL 1471
GQT+ V++YRF++ T+E I + K+ L V+ FT + T+L
Sbjct: 2116 FGQTKPVYVYRFLAQGTMEDKIYDRQVTKQSLSFRVVDQQQVERHFTMNELTEL 2169
>CE17314 [K] KOG1015 Transcription regulator XNP/ATRX DEAD-box superfamily
Length = 1359
Score = 88.6 bits (218), Expect = 7e-17
Identities = 97/373 (26%), Positives = 154/373 (41%), Gaps = 67/373 (17%)
Query: 712 ENNSKTEELPSPPKSDNELKDEKAETTESVTSPAAADPLAVSDVPVPSLLRGTLRIYQKQ 771
E E+ + S +LK + S + P+ V + SL+R L+ +Q
Sbjct: 415 EEGEDLTEMLTGTSSQRKLKSVVLDPDSSTVDEESKKPVEVHN----SLVR-ILKPHQAH 469
Query: 772 GLNW--------LASLYNNKTNGILADEMGLGKTIQTISLL-AYLACEK--ENWGPHLIV 820
G+ + L L + GILA MGLGKT+Q I+ L L EK E L+V
Sbjct: 470 GIQFMYDCAFESLDRLDTEGSGGILAHCMGLGKTLQVITFLHTVLMHEKIGEKCKRVLVV 529
Query: 821 VPTSVLLNWEMEFKRFAPG---------FKVLTYYGSPQQRREKRKGWNKPDAFHVCITS 871
VP +V++NW EF+++ L Y + + RR K W+ V I
Sbjct: 530 VPKNVIINWFKEFQKWLVDNDEELDTIDVNELDSYKTIEDRRRALKAWHSSKTPSVMIIG 589
Query: 872 YQL----VVHDQHSFKRKKWQ---------------------YMILDEAHNIKNFRSTRW 906
Y L V D K+ K + ++ DEAH +KN S
Sbjct: 590 YDLFRILTVEDDPKKKKPKNRNRRLEKAKEDFRKYLQNPGPDMVVCDEAHKLKNDDSALS 649
Query: 907 QALLNFNTERRLLLTGTPLQNNLAELWSLLYFLMPQTALENGKVSGFADLDAFQQWFGRP 966
+ ++ T+RR+ LTGTPLQNNL E ++ F+ P L + F
Sbjct: 650 KCMVKILTKRRICLTGTPLQNNLMEYHCMVNFVKP-------------GLLGTKTEFANR 696
Query: 967 VDKIVETGENYE----QDEETKKTVSKLHQVLRPYLLRRLKADVEKQMPGKYEHIIYCRL 1022
I+ G + + K+ L+ L+ + R+ + + +P K E++I R
Sbjct: 697 FVNIINRGRTKDASPLEVSFMKRRCHVLYDHLKKCVDRKDYRVLTEAIPPKQEYVINVRQ 756
Query: 1023 SKRQRFLYDDFMS 1035
++RQ LY+ F++
Sbjct: 757 TERQCALYNAFLN 769
Score = 79.3 bits (194), Expect = 4e-14
Identities = 49/171 (28%), Positives = 80/171 (46%), Gaps = 30/171 (17%)
Query: 1326 GHRALIFTQMTKVLDILEQFLNF--------------------------HGYLYMRLDGA 1359
G + L+F+Q + L ++++ L + G YM +DG+
Sbjct: 963 GDKLLVFSQSLESLTLIKRMLEYMAGTGQWFADGHEALNAEGEETWSWLEGEDYMTIDGS 1022
Query: 1360 TKIEDRQILTERFNSDP---RITVFILSSRSGGLGINLTGADTVIFYDSDWNPAMDKQCQ 1416
+ R + FN DP R + ++S+R+G LG N+ A+ VI +D+ WNP+ D Q
Sbjct: 1023 VQSGKRDAVQTSFN-DPLNLRARLMLISTRAGSLGTNMVAANRVIIFDACWNPSHDTQSL 1081
Query: 1417 DRCHRIGQTRDVHIYRFVSDHTIESNILKKANQKRHLDNVVIQTGDFTTDY 1467
R +R GQT+ V+IYRF++ T+E I K+ K V+ Y
Sbjct: 1082 FRVYRFGQTKPVYIYRFIAQGTMEERIYKRQVTKESTSMRVVDEAQIQRHY 1132
>7291744 [R] KOG1016 Predicted DNA helicase DEAD-box superfamily
Length = 1534
Score = 88.6 bits (218), Expect = 7e-17
Identities = 85/334 (25%), Positives = 134/334 (39%), Gaps = 66/334 (19%)
Query: 782 NKTNG---ILADEMGLGKTIQTISLLAYLACEKENWGPHLIVVPTSVLLNWEMEFKRFAP 838
NK++G ILA MGLGKT+Q +S + + L V+P + L NW EF + P
Sbjct: 407 NKSSGFGCILAHSMGLGKTLQVVSFCD-IFLRHTSAKTVLCVMPINTLQNWLSEFNMWIP 465
Query: 839 --------------------------------------------GFKVLTYYGSPQQRRE 854
G+++ +
Sbjct: 466 RYSTDSNVRPRNFDIFVLNDQQKTLTARAKVILNWVHDGGVLLIGYELFRLLALKLVKTR 525
Query: 855 KRKGWN-KPDAFHVCITSYQLVVHDQHSFKRKKWQYMILDEAHNIKNFRSTRWQALLNFN 913
KRKG +PD LV + + +I DE H IKN + AL
Sbjct: 526 KRKGSVIRPDGMDSSSDLMNLVYE---ALVKPGPDLVICDEGHRIKNSHAGISLALKEIR 582
Query: 914 TERRLLLTGTPLQNNLAELWSLLYFLMPQTALENGKVSGFADLDAFQQWFGRPVDKIVET 973
T RR++LTG PLQNNL E W ++ F+ P G + F ++ F RP+
Sbjct: 583 TRRRIVLTGYPLQNNLLEYWCMVDFVRPNYL---GTRTEFCNM------FERPIQNGQCV 633
Query: 974 GENYEQDEETKKTVSKLHQVLRPYLLRRLKADVEKQMPGKYEHIIYCRLSKRQRFLYDDF 1033
+ + + LH +L ++ RR ++ +P KYE++I +++ QR LYD F
Sbjct: 634 DSTPDDIKLMRYRAHVLHSLLLGFVQRRSHTVLQLTLPQKYEYVILVKMTAFQRKLYDTF 693
Query: 1034 MSRAQTKETLASGNFMSIINCLMQLRKVCNHPDL 1067
M+ + + + F + + K+ NHPD+
Sbjct: 694 MT-----DVVRTKAFPNPLKAFAVCCKIWNHPDV 722
>Hs21071060 [B] KOG1000 Chromatin remodeling protein HARP/SMARCAL1 DEAD-box
superfamily
Length = 954
Score = 87.4 bits (215), Expect = 2e-16
Identities = 87/299 (29%), Positives = 136/299 (45%), Gaps = 40/299 (13%)
Query: 754 DVPVPSL------LRGTLRIYQKQGLNWLASLYNNKTNGILADEMGLGKTIQTISLLAYL 807
DVP L L L +Q+ G+N+ + +LAD+MGLGKTIQ I + A+
Sbjct: 419 DVPEADLSEVDPKLVSNLMPFQRAGVNFAIAKGGRL---LLADDMGLGKTIQAICIAAFY 475
Query: 808 ACEKENWGPHLIVVPTSVLLNWEMEFKRFAPGFKVLTYYGSPQQRREKRKGWNKPDAFHV 867
++ W P L+VVP+SV WE F R+ P SP G ++ A +
Sbjct: 476 ---RKEW-PLLVVVPSSVRFTWEQAFLRWLPSL-------SPDCINVVVTGKDRLTAGLI 524
Query: 868 CITSYQLVVHDQHSFKRKKWQYMILDEAHNIKNFRSTRWQALLNF--NTERRLLLTGTPL 925
I S+ L+ + K ++ +I+DE+H +KN R+ R +A + +R +LL+GTP
Sbjct: 525 NIVSFDLLSKLEKQLK-TPFKVVIIDESHFLKNSRTARCRAAMPVLKVAKRVILLSGTPA 583
Query: 926 QNNLAELWSLLYFLMPQTALENGKVSGFADLDAFQQWFGRPVDKIVETGENYEQDEETKK 985
+ AEL++ + + P T G DA K + G +Y +
Sbjct: 584 MSRPAELYTQIIAVKP-TFFPQFHAFGLRYCDA----------KRMPWGWDYSGSSNLGE 632
Query: 986 TVSKLHQVLRPYLLRRLKADVEKQMPGKYEHIIYC---RLSKRQRFLYDDFMSRAQTKE 1041
L + + +LRRLK+DV Q+P K I+ R++ R R D TK+
Sbjct: 633 LKLLLEEAV---MLRRLKSDVLSQLPAKQRKIVVIAPGRINARTRAALDAAAKEMTTKD 688
Score = 74.7 bits (182), Expect = 1e-12
Identities = 40/121 (33%), Positives = 64/121 (52%)
Query: 1330 LIFTQMTKVLDILEQFLNFHGYLYMRLDGATKIEDRQILTERFNSDPRITVFILSSRSGG 1389
L+F VLD + Q L ++R+DG+T +R+ L ++F R V +LS +
Sbjct: 729 LVFAHHKVVLDAITQELERKHVQHIRIDGSTSSAEREDLCQQFQLSERHAVAVLSITAAN 788
Query: 1390 LGINLTGADTVIFYDSDWNPAMDKQCQDRCHRIGQTRDVHIYRFVSDHTIESNILKKANQ 1449
+G+ + AD V+F + WNP + Q +DR HRIGQT V I+ V+ T + + +
Sbjct: 789 MGLTFSSADLVVFAELFWNPGVLIQAEDRVHRIGQTSSVGIHYLVAKGTADDYLWPLIQE 848
Query: 1450 K 1450
K
Sbjct: 849 K 849
>YLR032w [KL] KOG1001 Helicase-like transcription factor HLTF/DNA helicase
RAD5 DEAD-box superfamily
Length = 1169
Score = 83.6 bits (205), Expect = 2e-15
Identities = 91/343 (26%), Positives = 152/343 (43%), Gaps = 84/343 (24%)
Query: 786 GILADEMGLGKTIQTISLLAYLACE--------------------------KENWGPH-- 817
GIL+DEMGLGKT+ SL+ L+C ++N P+
Sbjct: 528 GILSDEMGLGKTVAAYSLV--LSCPHDSDVVDKKLFDIENTAVSDNLPSTWQDNKKPYAS 585
Query: 818 ---LIVVPTSVLLNWEMEFKRF--APGFKVLTYYGSPQQRREKRKGWNKPDAFHVCITSY 872
LIVVP S+L W EF + +P YYG + K V +T+Y
Sbjct: 586 KTTLIVVPMSLLTQWSNEFTKANNSPDMYHEVYYGGNVSSLKTLLTKTKTPPT-VVLTTY 644
Query: 873 QLVVHD--QHSFKRK--------------KWQYMILDEAHNIKNFRSTRWQALLNFNTER 916
+V ++ +HS R + +I+DE HNI+N + +A++ +
Sbjct: 645 GIVQNEWTKHSKGRMTDEDVNISSGLFSVNFYRIIIDEGHNIRNRTTVTSKAVMALQGKC 704
Query: 917 RLLLTGTPLQNNLAELWSLLYFLMPQTALENGKVSGFADLDAFQQWFGRPVDKIVETGEN 976
+ +LTGTP+ N L +L+SL+ FL ++ + ++ ++ + P + +N
Sbjct: 705 KWVLTGTPIINRLDDLYSLVKFL---------ELDPWRQINYWKTFVSTPFE-----SKN 750
Query: 977 YEQDEETKKTVSKLHQVLRPYLLRRLKADVEK------QMPGKYEHIIYCRLSKRQRFLY 1030
Y K+ ++ +L P LLRR K +K ++P K I SK Q LY
Sbjct: 751 Y------KQAFDVVNAILEPVLLRRTKQMKDKDGKPLVELPPKEVVIKRLPFSKSQDLLY 804
Query: 1031 DDFMSRAQ--TKETLASGN----FMSIINCLMQLRKVCNHPDL 1067
+ +A+ K +A G+ + +I+ +++LR+VC HP L
Sbjct: 805 KFLLDKAEVSVKSGIARGDLLKKYSTILVHILRLRQVCCHPGL 847
Score = 77.8 bits (190), Expect = 1e-13
Identities = 46/133 (34%), Positives = 72/133 (53%), Gaps = 8/133 (6%)
Query: 1326 GHRALIFTQMTKVLDILEQFLNFHGYL-----YMRLDGATKIEDRQILTERF--NSDPRI 1378
G + +IF+Q + LDILE+ L H + + DG +++R + F R
Sbjct: 1012 GEQVVIFSQFSTYLDILEKELT-HTFSKDVAKIYKFDGRLSLKERTSVLADFAVKDYSRQ 1070
Query: 1379 TVFILSSRSGGLGINLTGADTVIFYDSDWNPAMDKQCQDRCHRIGQTRDVHIYRFVSDHT 1438
+ +LS ++GG+G+NLT A D W+P+M+ Q DR HRIGQT V + RF+ +
Sbjct: 1071 KILLLSLKAGGVGLNLTCASHAYMMDPWWSPSMEDQAIDRLHRIGQTNSVKVMRFIIQDS 1130
Query: 1439 IESNILKKANQKR 1451
IE +L+ +KR
Sbjct: 1131 IEEKMLRIQEKKR 1143
>At1g48310 [B] KOG1000 Chromatin remodeling protein HARP/SMARCAL1 DEAD-box
superfamily
Length = 675
Score = 83.2 bits (204), Expect = 3e-15
Identities = 48/131 (36%), Positives = 68/131 (51%), Gaps = 2/131 (1%)
Query: 1326 GHRALIFTQMTKVLDILEQFLNFHGYLYMRLDGATKIEDRQILTERFNSDPRITVFILSS 1385
G + L+F +L+ L QFL +R+DG+T RQ L F I +LS
Sbjct: 522 GCKFLVFAHHQSMLEELHQFLKKKKVGCIRIDGSTPASSRQALVSDFQDKDEIKAAVLSI 581
Query: 1386 RSGGLGINLTGADTVIFYDSDWNPAMDKQCQDRCHRIGQTRDVHIYRFVSDHTIESNILK 1445
R+ G+GI LT A TVIF + W P Q +DR HRIGQ V+I+ +++ T++ I
Sbjct: 582 RAAGVGITLTAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNIHYLLANDTVDDIIWD 641
Query: 1446 KANQKRHLDNV 1456
K LDN+
Sbjct: 642 VVQSK--LDNL 650
>At5g07810 [B] KOG1000 Chromatin remodeling protein HARP/SMARCAL1 DEAD-box
superfamily
Length = 1178
Score = 81.6 bits (200), Expect = 9e-15
Identities = 38/125 (30%), Positives = 71/125 (56%)
Query: 1328 RALIFTQMTKVLDILEQFLNFHGYLYMRLDGATKIEDRQILTERFNSDPRITVFILSSRS 1387
+ ++F KVLD +++F+ G ++R+DG T DRQ+ + F + + I+ +
Sbjct: 544 KMVVFAHHHKVLDGIQEFICDKGIGFVRIDGTTLPRDRQLAVQSFQFSSEVKIAIIGVEA 603
Query: 1388 GGLGINLTGADTVIFYDSDWNPAMDKQCQDRCHRIGQTRDVHIYRFVSDHTIESNILKKA 1447
GG+G++ + A V+F + P++ Q +DR HR GQT V++Y F + T++ + +
Sbjct: 604 GGVGLDFSAAQNVVFLELPKTPSLLLQAEDRAHRRGQTSAVNVYIFCAKDTMDESNWQNL 663
Query: 1448 NQKRH 1452
N+K H
Sbjct: 664 NKKLH 668
Score = 53.5 bits (127), Expect = 3e-06
Identities = 62/263 (23%), Positives = 109/263 (40%), Gaps = 39/263 (14%)
Query: 788 LADEMGLGKTIQTISLLAYLACEKENWGPHLIVVPTSVLLNWEMEFKRFAPGF---KVLT 844
+ADEMGLGKT+Q I++ E G L+V P + W E +R+ P V
Sbjct: 224 IADEMGLGKTLQAIAIAGCFISE----GSILVVCPAVLRFTWAEELERWLPSCLPSDVHL 279
Query: 845 YYGSPQQRREKRKGWNKPDAFHVCITSYQLVVHDQHSFKRKKWQYMILDEAHNI----KN 900
+G Q W K V + SY+++ H + + ++W +I+DE+H++ K
Sbjct: 280 VFGH-QDNPAYLPRWPK-----VVVISYKMLQHLRTTMLEREWALLIVDESHHLRCSKKK 333
Query: 901 FRSTRWQALLNF--NTERRLLLTGTPLQNNLAELWSLLYFLMPQTALENGKVSGFADLDA 958
+ +L+ + +LL+GTP + L Y +T E G V G
Sbjct: 334 SDPPEIKTVLDVAEKVKHIILLSGTPSVSRPGLLGKDKY-EFAKTYCEVGLVRGI----- 387
Query: 959 FQQWFGRPVDKIVETGENYEQDEETKKTVSKLHQVLRPYLLRRLKADVEKQMPGKYEHII 1018
G+ ++ + + + + + ++RRLK + Q+P K I+
Sbjct: 388 --------------QGKIFQDFSKGTRLLELNILLNQTVMIRRLKQHLLTQLPPKRRQIV 433
Query: 1019 YCRLSKRQRFLYDDFMSRAQTKE 1041
L K L +S A+ ++
Sbjct: 434 TILLKKSDIALAMAIVSEAKKQK 456
>CE14110 [KL] KOG4439 RNA polymerase II transcription termination factor
TTF2/lodestar DEAD-box superfamily
Length = 1026
Score = 80.5 bits (197), Expect = 2e-14
Identities = 48/158 (30%), Positives = 84/158 (52%), Gaps = 11/158 (6%)
Query: 1328 RALIFTQMTKVLDILEQFLNFHGYLYMRLDGATKIEDRQILTERFNSDPR-ITVFILSSR 1386
+ +I +Q T VL+++E+ + G+ Y + G ++DRQ + FN + V +LS
Sbjct: 858 KVVIVSQWTSVLNLVEKHIQAGGHNYTSITGQVLVKDRQERVDSFNQEKGGAQVMLLSLT 917
Query: 1387 SGGLGINLTGADTVIFYDSDWNPAMDKQCQDRCHRIGQTRDVHIY--------RFVSDHT 1438
+GG+G+NL G + +I D WNPA+++Q DR +R+GQ ++V I+ R + T
Sbjct: 918 AGGVGLNLIGGNHLIMVDLHWNPALEQQACDRIYRMGQKKEVFIHRLNISKFCRLIVKGT 977
Query: 1439 IESNILKKANQKRHLDNVVIQTGDFTTDYFTKLSVKDL 1476
IE ++ +K L V++ T KL+ D+
Sbjct: 978 IEQRVMDLQEKKLALAASVLE--GTATRKLNKLTTADI 1013
>7298962 [KL] KOG4439 RNA polymerase II transcription termination factor
TTF2/lodestar DEAD-box superfamily
Length = 965
Score = 78.2 bits (191), Expect = 1e-13
Identities = 39/131 (29%), Positives = 72/131 (54%)
Query: 1328 RALIFTQMTKVLDILEQFLNFHGYLYMRLDGATKIEDRQILTERFNSDPRITVFILSSRS 1387
+ ++ +Q L I+ + L + + +G ++R+I+ FN++ V +LS +
Sbjct: 809 KIIVTSQWVSYLAIVRKRLQDLSWETLDFNGQLTAKEREIVLRDFNANNEKRVLLLSLTA 868
Query: 1388 GGLGINLTGADTVIFYDSDWNPAMDKQCQDRCHRIGQTRDVHIYRFVSDHTIESNILKKA 1447
GG+G+NL A+ ++ D WNP +++Q QDR +R GQT+ IYR++ T+E I
Sbjct: 869 GGVGLNLNVANHMLIVDLHWNPQLERQAQDRIYRYGQTKPTFIYRYMCQDTVEQRIKSLQ 928
Query: 1448 NQKRHLDNVVI 1458
+ K + VV+
Sbjct: 929 DCKLEIAKVVL 939
Score = 63.9 bits (154), Expect = 2e-09
Identities = 59/226 (26%), Positives = 99/226 (43%), Gaps = 43/226 (19%)
Query: 818 LIVVPTSVLLNW--EMEFKRFAPGFKVLTYYGSPQQRREKRKGWNKPDAFHVCITSYQLV 875
L+V P SV+ W E+ K +VLT++G + G ++ + ITSY LV
Sbjct: 393 LVVCPMSVMCQWAHEVASKVAQNAIRVLTFHGPNRHEI----GIEAFRSYDLVITSYNLV 448
Query: 876 VHDQHSFKRKK------WQYMILDEAHNIKNFRSTRWQALLNFNTERRLLLTGTPLQNNL 929
V++ + W +ILDEAH I+N ++ ++ LTGTP+QN
Sbjct: 449 VNELKRYGNTSPLFAVYWNRVILDEAHIIRNSKTNCCNSVCQLRAHCHWALTGTPVQNRG 508
Query: 930 AELWSLLYFLMPQTALENGKVSGFADLDAFQQWFGRPVDKIVETGENYEQDEETKKTVSK 989
++++LL F+ V F DL QQW + E+ +
Sbjct: 509 VDVFALLRFV---------NVPNFQDL---QQW--------------KKNLNESMLGHRR 542
Query: 990 LHQVLRPYLLRRLKADVEKQ-----MPGKYEHIIYCRLSKRQRFLY 1030
L+ +++P +LRR K ++ +P +I +LSK + +Y
Sbjct: 543 LNFIIKPLMLRRTKQKLQASGDMPALPSLKIELICVQLSKTEMAVY 588
>CE11450 [KL] KOG4439 RNA polymerase II transcription termination factor
TTF2/lodestar DEAD-box superfamily
Length = 518
Score = 77.4 bits (189), Expect = 2e-13
Identities = 39/111 (35%), Positives = 64/111 (57%), Gaps = 1/111 (0%)
Query: 1350 GYLYMRLDGATKIEDRQILTERFNSDPR-ITVFILSSRSGGLGINLTGADTVIFYDSDWN 1408
G+ Y + G I+DRQ + FN + +LS +GG+G+NL G + +I D WN
Sbjct: 379 GHGYTSITGEVAIKDRQERVDSFNQEKGGAQDMLLSLTAGGVGLNLIGGNHLIMVDLHWN 438
Query: 1409 PAMDKQCQDRCHRIGQTRDVHIYRFVSDHTIESNILKKANQKRHLDNVVIQ 1459
PA+++Q DR +R+GQ ++VHI+R + TIE ++ +K L V++
Sbjct: 439 PALEQQACDRIYRMGQKKEVHIHRLIVKETIEQRVMSLQEKKLALAASVLE 489
Score = 68.6 bits (166), Expect = 8e-11
Identities = 64/217 (29%), Positives = 101/217 (46%), Gaps = 22/217 (10%)
Query: 728 NELKDEKAETTESVTSPAAADPLAVSDVPVPSLLRGTLRIYQKQGLNWLASLYNNK-TNG 786
N+L + A+ T ++ PA D +++ P L+ L +QK GL WL + + G
Sbjct: 114 NKLTQQLADATHTI--PAETD---LTETPDGFLV--DLMPHQKAGLCWLLWRESQPHSGG 166
Query: 787 ILADEMGLGKTIQTISLLAYLACEKENW--GPHLIVVPTSVLLNWEMEFKRFAPG--FKV 842
IL +MGLGKT+ ISL+ + ++ + P S++ +WE E R V
Sbjct: 167 ILGGDMGLGKTLSMISLIVHQKAARKTRKDAGDDAIAPESLVHHWEAEIARRLKQDLLSV 226
Query: 843 LTYYGSPQQRREK------RKGWNKPDAFHVCITSYQLVVH--DQHS--FKRKKWQYMIL 892
L Y+G+ + K ++ D + C V D++S R W Y+IL
Sbjct: 227 LVYHGNRRHINPKDLKKHIELDYDLEDEHNPCSKLRPRVCPKADKNSSPLARIAWSYVIL 286
Query: 893 DEAHNIKNFRSTRWQALLNFNTERRLLLTGTPLQNNL 929
DEAH IKN + +A + R L+GTP+ NN+
Sbjct: 287 DEAHIIKNRNAQCSEAACKISAFSRWCLSGTPIHNNM 323
>Hs20532976 [B] KOG1000 Chromatin remodeling protein HARP/SMARCAL1 DEAD-box
superfamily
Length = 293
Score = 73.6 bits (179), Expect = 2e-12
Identities = 38/121 (31%), Positives = 65/121 (53%)
Query: 1330 LIFTQMTKVLDILEQFLNFHGYLYMRLDGATKIEDRQILTERFNSDPRITVFILSSRSGG 1389
L+F +L + + + Y+R+DG+ +R L +F DP V ILS ++ G
Sbjct: 90 LVFAHHLSMLQACTEAVIENKTRYIRIDGSVSSSERIHLVNQFQKDPDTRVAILSIQAAG 149
Query: 1390 LGINLTGADTVIFYDSDWNPAMDKQCQDRCHRIGQTRDVHIYRFVSDHTIESNILKKANQ 1449
G+ T A V+F + W+P KQ +DR HRIGQ V+I+ +++ T+++ + N+
Sbjct: 150 QGLTFTAASHVVFAELYWDPGHIKQAEDRAHRIGQCSSVNIHYLIANGTLDTLMWGMLNR 209
Query: 1450 K 1450
K
Sbjct: 210 K 210
>7296909 [B] KOG1000 Chromatin remodeling protein HARP/SMARCAL1 DEAD-box
superfamily
Length = 701
Score = 72.8 bits (177), Expect = 4e-12
Identities = 42/134 (31%), Positives = 70/134 (51%), Gaps = 3/134 (2%)
Query: 1330 LIFTQMTKVLDILEQFLNFHGYLYMRLDGATKIEDRQILTERFNSDPRITVFILSSRSGG 1389
+IF ++D + FL+ Y+R+DG T+ + R + F V +LS ++
Sbjct: 539 IIFAHHRVMMDAISDFLSGLKVHYIRIDGQTRSDHRSDSVDTFQKKSSCKVALLSLKACN 598
Query: 1390 LGINLTGADTVIFYDSDWNPAMDKQCQDRCHRIGQTRDVHIYRFVSDHTIESNILKKANQ 1449
GI LT A+ ++F + DWNP+ Q + R HRIGQT+ V I R++ H +I+ N
Sbjct: 599 SGITLTAAEIIVFAELDWNPSTLAQAESRAHRIGQTKPV-ICRYLIAHNTADDII--WNM 655
Query: 1450 KRHLDNVVIQTGDF 1463
++ V+ + G F
Sbjct: 656 LKNKQEVLSKVGIF 669
Score = 69.7 bits (169), Expect = 3e-11
Identities = 73/270 (27%), Positives = 117/270 (43%), Gaps = 50/270 (18%)
Query: 787 ILADEMGLGKTIQTISLLAYLACEKENWGPHLIVVPTSVLLNWEMEFKRFAPGFKVLTYY 846
++ DEMGLGKT Q +++ Y K++W P L+ S +W P KV +Y
Sbjct: 266 MICDEMGLGKTYQALAVADYF---KDDW-PLLVCTTASTRDSWAKHIMDLLP--KVPIHY 319
Query: 847 GSPQQRREKRKGWNKPDAFHVCITSYQLVVHDQHSFKRKKWQYMILDEAHNIKNFRS--T 904
+ G K V ITSY ++ + ++K+ ++I DE+H +KN ++ T
Sbjct: 320 VQVLNNNQLYVGEAK-----VLITSYNMMERHEDKLMQRKFGFIIFDESHTLKNSKAKCT 374
Query: 905 RWQALLNFNTERRLLLTGTPLQNNLAELWSLLYFLMPQTALENGKVSGFADL-----DAF 959
L +R +LL+GTP + EL++ L + +GK F + D
Sbjct: 375 TTAKRLTDQAKRVVLLSGTPALSRPLELFTQLQMI-------DGKFMNFMEFTTRYCDGK 427
Query: 960 QQWFGRPVDKIVETGENYEQDEETKKTVSKLHQVLRPYLLRRLKADVEKQMPGKYEHIIY 1019
Q FG N + + E K + L Y+LRR K +V Q+ K
Sbjct: 428 QSTFG--------WDANGQSNLEELKVILHL-----KYMLRRTKVEVLPQLAEK------ 468
Query: 1020 CRLSKRQRFLYDDFM--SRAQTKETLASGN 1047
R+ + D + + A+TKETL + N
Sbjct: 469 ----NRETVVLDPALVWTNAETKETLDAFN 494
>ECU06g0820 [B] KOG1000 Chromatin remodeling protein HARP/SMARCAL1 DEAD-box
superfamily
Length = 556
Score = 72.4 bits (176), Expect = 5e-12
Identities = 38/127 (29%), Positives = 64/127 (49%)
Query: 1324 DNGHRALIFTQMTKVLDILEQFLNFHGYLYMRLDGATKIEDRQILTERFNSDPRITVFIL 1383
+ G + ++F T++++ LE F +R+DG+ R +L ++F + + V +L
Sbjct: 392 EKGMKFVVFCHHTEMMESLEGFFAERNVPMIRIDGSVPSTSRHLLVKKFQENEEVMVALL 451
Query: 1384 SSRSGGLGINLTGADTVIFYDSDWNPAMDKQCQDRCHRIGQTRDVHIYRFVSDHTIESNI 1443
S + G+ LT V+F + WNP + Q +DR HRIGQ V I V+ TI+ +
Sbjct: 452 SITACSTGLTLTAGRAVVFAELYWNPGVLLQAEDRIHRIGQKSSVDIIYLVAKGTIDEYV 511
Query: 1444 LKKANQK 1450
K K
Sbjct: 512 WPKLLSK 518
Score = 67.8 bits (164), Expect = 1e-10
Identities = 73/262 (27%), Positives = 123/262 (46%), Gaps = 39/262 (14%)
Query: 768 YQKQGLNWLASLYNNKTNGILADEMGLGKTIQTISLLAYLACEKENWGPHLIVVPTSVLL 827
+Q++G+ N I+AD+MGLGKTIQ +++ Y E W P +I+ P S+L
Sbjct: 127 FQREGVE---HALNRGGRMIVADDMGLGKTIQALAVAYYYRAE---W-PLVIIAPASLLE 179
Query: 828 NWEMEFKRFAPGFKVLTYYGSPQQRREKRKGWNKPDAFHVCITSYQLVVHDQHSFKRKKW 887
+W +RF G + + RR++ G + + SY+ V +
Sbjct: 180 DWADACRRFL-GMEAMV------MRRKEDFGQ------EIGVVSYE-VASSHANVLACGA 225
Query: 888 QYMILDEAHNIKNFRSTRWQALLNF--NTERRLLLTGTPLQNNLAELWSLLYFLMPQTAL 945
+I DE H +K+ ++ R +A++ R LLL+GTP + EL+ ++ +A+
Sbjct: 226 GVVIADECHYLKSLQTKRTKAIVPLLQKVSRALLLSGTPAVSRPLELYPII------SAV 279
Query: 946 ENGKVSGFADLDAFQQWFGRPVDKIVETGENYEQDEETKKTVSKLHQVLRPYL-LRRLKA 1004
+ FA+ A + GR V G+ Y D + +LH VLR +L +RR K
Sbjct: 280 DRTIFPRFAEYGA-RYCNGRKV------GQWY--DYKGCSNAEELHYVLRKFLMIRRTKD 330
Query: 1005 DVEKQMPGKYEHIIYCRLSKRQ 1026
+V Q+P K+ + + RQ
Sbjct: 331 EVLGQLPPKFRRQVVLECTGRQ 352
>CE27689 [B] KOG1000 Chromatin remodeling protein HARP/SMARCAL1 DEAD-box
superfamily
Length = 689
Score = 72.0 bits (175), Expect = 7e-12
Identities = 44/139 (31%), Positives = 67/139 (47%), Gaps = 1/139 (0%)
Query: 1328 RALIFTQMTKVLDILEQFLNFHGYLYMRLDGATKIEDRQILTERFNSDPRITVFILSSRS 1387
+ LIF VLD ++ +N +R+DG T R L + F +D I V +LS +
Sbjct: 494 KVLIFAHHQIVLDTIQVEVNKRKLGSIRIDGKTPSHRRTALCDSFQTDDNIRVAVLSITA 553
Query: 1388 GGLGINLTGADTVIFYDSDWNPAMDKQCQDRCHRIGQTRDVHIYRFVSDHTIESNILKKA 1447
G+GI LT A V+F + +NP Q +DR HR+GQ V + ++ T + +
Sbjct: 554 AGVGITLTAASVVVFAEIHFNPGYLVQAEDRAHRVGQKDSVFVQYLIAKKTADDVMWNMV 613
Query: 1448 NQKRH-LDNVVIQTGDFTT 1465
QK L V + + F T
Sbjct: 614 QQKLDVLGQVSLSSDTFRT 632
>CE27688 [B] KOG1000 Chromatin remodeling protein HARP/SMARCAL1 DEAD-box
superfamily
Length = 687
Score = 72.0 bits (175), Expect = 7e-12
Identities = 44/139 (31%), Positives = 67/139 (47%), Gaps = 1/139 (0%)
Query: 1328 RALIFTQMTKVLDILEQFLNFHGYLYMRLDGATKIEDRQILTERFNSDPRITVFILSSRS 1387
+ LIF VLD ++ +N +R+DG T R L + F +D I V +LS +
Sbjct: 492 KVLIFAHHQIVLDTIQVEVNKRKLGSIRIDGKTPSHRRTALCDSFQTDDNIRVAVLSITA 551
Query: 1388 GGLGINLTGADTVIFYDSDWNPAMDKQCQDRCHRIGQTRDVHIYRFVSDHTIESNILKKA 1447
G+GI LT A V+F + +NP Q +DR HR+GQ V + ++ T + +
Sbjct: 552 AGVGITLTAASVVVFAEIHFNPGYLVQAEDRAHRVGQKDSVFVQYLIAKKTADDVMWNMV 611
Query: 1448 NQKRH-LDNVVIQTGDFTT 1465
QK L V + + F T
Sbjct: 612 QQKLDVLGQVSLSSDTFRT 630
>SPAC144.05 [L] KOG0298 DEAD box-containing helicase-like transcription
factor/DNA repair protein
Length = 1375
Score = 70.5 bits (171), Expect = 2e-11
Identities = 37/117 (31%), Positives = 62/117 (52%), Gaps = 4/117 (3%)
Query: 1328 RALIFTQMTKVLDILEQFLNFHGYLYMRLDGATKIEDRQILTERFNSDPRITVFILSSRS 1387
+ ++F+Q VLD+L + +G +++R DG +K +RF + + V L +RS
Sbjct: 1206 KVVVFSQWLDVLDVLHKSFEANGIVFIRFDGKSK----NTCLKRFKEERSLQVLTLHARS 1261
Query: 1388 GGLGINLTGADTVIFYDSDWNPAMDKQCQDRCHRIGQTRDVHIYRFVSDHTIESNIL 1444
G+ LT A V + N ++ Q R HRIGQTR +Y ++ + T+E +IL
Sbjct: 1262 QSSGLTLTNATHVFMCEPLLNSGIEMQAISRVHRIGQTRPTFVYYYIVEDTVEGHIL 1318
>Hs22048060 [K] KOG0384 Chromodomain-helicase DNA-binding protein
Length = 122
Score = 65.5 bits (158), Expect = 7e-10
Identities = 33/66 (50%), Positives = 42/66 (63%)
Query: 787 ILADEMGLGKTIQTISLLAYLACEKENWGPHLIVVPTSVLLNWEMEFKRFAPGFKVLTYY 846
ILADEMGLGKTIQ IS L+YL + +GP LIVVP S + +W+ EF+ + V+ Y
Sbjct: 33 ILADEMGLGKTIQVISFLSYLFNVHQLYGPFLIVVPLSTMTSWQREFEAWDSKMNVVVYI 92
Query: 847 GSPQQR 852
G R
Sbjct: 93 GDINSR 98
>At1g05480 [L] KOG0390 DNA repair protein SNF2 family
Length = 588
Score = 65.1 bits (157), Expect = 9e-10
Identities = 45/137 (32%), Positives = 69/137 (49%), Gaps = 8/137 (5%)
Query: 1328 RALIFTQMTKVLDILEQFLNFH-----GYLYMRLDGATKIEDRQILTERFNSDPR--ITV 1380
+ L+F+Q L ++ + L G + + G + + RQ L FN DP+ V
Sbjct: 395 KVLVFSQYIDPLKLIMKHLVSRFKWNPGEEVLYMHGKLEQKQRQTLINEFN-DPKSKAKV 453
Query: 1381 FILSSRSGGLGINLTGADTVIFYDSDWNPAMDKQCQDRCHRIGQTRDVHIYRFVSDHTIE 1440
F+ S+++ GI+L GA VI D WNPA+++Q R +RIGQ R V+ Y V+ T E
Sbjct: 454 FLASTKACSEGISLVGASRVILLDVVWNPAVERQAISRAYRIGQKRIVYTYHLVAKGTPE 513
Query: 1441 SNILKKANQKRHLDNVV 1457
K QK + +V
Sbjct: 514 GPKYCKQAQKDRISELV 530
Score = 58.5 bits (140), Expect = 8e-08
Identities = 40/175 (22%), Positives = 80/175 (44%), Gaps = 14/175 (8%)
Query: 890 MILDEAHNIKNFRSTRWQALLNFNTERRLLLTGTPLQNNLAELWSLLYFLMPQTALENGK 949
++LDEAH +N RS W+ L T++R+LL+GTP QNN EL ++L P+
Sbjct: 186 LVLDEAHTPRNQRSCIWKTLSKVETQKRILLSGTPFQNNFLELCNVLGLARPKY------ 239
Query: 950 VSGFADLDAFQQWFGRPVDKIVETGENYEQDEETKKTVSKLHQVLRPYLLRRLKADVEKQ 1009
L+ + + + G+ +E + + +L V+ P++ + ++
Sbjct: 240 ------LERLTSTLKKSGMTVTKRGKKNLGNEINNRGIEELKAVMLPFVHVHKGSILQSS 293
Query: 1010 MPGKYEHIIYCRLSKRQRFLYD--DFMSRAQTKETLASGNFMSIINCLMQLRKVC 1062
+PG E ++ + QR + + + +TK + + +S+++ L C
Sbjct: 294 LPGLRECVVVLNPPELQRRVLESIEVTHNRKTKNVFETEHKLSLVSVHPSLVSRC 348
>At3g24340 [L] KOG0390 DNA repair protein SNF2 family
Length = 1132
Score = 64.3 bits (155), Expect = 1e-09
Identities = 42/139 (30%), Positives = 68/139 (48%), Gaps = 6/139 (4%)
Query: 1328 RALIFTQMTKVLD-ILEQFLN----FHGYLYMRLDGATKIEDRQILTERFNS-DPRITVF 1381
+ L+++Q L I+EQ + G + + G + DRQ + + FN D V
Sbjct: 945 KVLVYSQYIDTLKLIMEQLIAECDWTEGEQILLMHGKVEQRDRQHMIDNFNKPDSGSKVL 1004
Query: 1382 ILSSRSGGLGINLTGADTVIFYDSDWNPAMDKQCQDRCHRIGQTRDVHIYRFVSDHTIES 1441
+ S+++ GI+L GA V+ D WNP+++ Q R RIGQ R V IY + T E
Sbjct: 1005 LASTKACSEGISLVGASRVVILDVVWNPSVESQAISRAFRIGQKRAVFIYHLMVKDTSEW 1064
Query: 1442 NILKKANQKRHLDNVVIQT 1460
N K ++K + +V +
Sbjct: 1065 NKYCKQSEKHRISELVFSS 1083
>SPAC13G6.01c [KL] KOG1001 Helicase-like transcription factor HLTF/DNA helicase
RAD5 DEAD-box superfamily
Length = 104
Score = 63.9 bits (154), Expect = 2e-09
Identities = 29/79 (36%), Positives = 49/79 (61%)
Query: 1375 DPRITVFILSSRSGGLGINLTGADTVIFYDSDWNPAMDKQCQDRCHRIGQTRDVHIYRFV 1434
DP + V I+S ++GG+G+NLT A+ V D W+ +++ Q DR HR+GQ + V + R++
Sbjct: 1 DPDVNVLIISLKAGGVGLNLTCANHVFIMDPWWSWSVEAQAIDRIHRLGQEKPVFVTRYI 60
Query: 1435 SDHTIESNILKKANQKRHL 1453
T+E +LK +K +
Sbjct: 61 VRDTVEERMLKIQERKNFI 79
>At2g16390 [L] KOG0390 DNA repair protein SNF2 family
Length = 888
Score = 63.9 bits (154), Expect = 2e-09
Identities = 79/329 (24%), Positives = 137/329 (41%), Gaps = 41/329 (12%)
Query: 725 KSDNELKDEKAETTESVTSPAAADPLAVSDVPVPSLLRGTLRIYQKQGLNWLAS--LYNN 782
+SDNELK + + AA P ++ ++ +Q +G +L S + ++
Sbjct: 323 ESDNELKFSEEGL---MIGGLAAHPTHAAE----------MKPHQIEGFQFLCSNLVADD 369
Query: 783 KTNGILADEMGLGKTIQTISLLAYLACEKENWGPHLIVVPTSVLLNWEMEFKRF-APGFK 841
I+A G GKT IS + + P L+V+P +L W+ EF R+
Sbjct: 370 PGGCIMAHAPGSGKTFMIISFMQSFLAKYPQAKP-LVVLPKGILPTWKKEFVRWQVEDIP 428
Query: 842 VLTYYGSPQQRREKR----KGW-NKPDAFHVCITSYQLVVHDQ-------HSFKRKKWQY 889
+L +Y + + R ++ K W K + + +V D K
Sbjct: 429 LLDFYSAKAENRAQQLSILKQWMEKKSILFLGYQQFSTIVCDDTTDSLSCQEILLKVPSI 488
Query: 890 MILDEAHNIKNFRSTRWQALLNFNTERRLLLTGTPLQNNLAELWSLLYFLMPQ-TALENG 948
+ILDE H +N + Q+L T R+++L+GT QN++ E++++L + P+ L+
Sbjct: 489 LILDEGHTPRNEDTNLLQSLAQVQTPRKVVLSGTLYQNHVKEVFNILNLVRPKFLKLDTS 548
Query: 949 K-----VSGFADLDAFQQWFGRPVD---KIVETGENYEQDEETKKTVSKLHQVLRPY--- 997
K + + D + G D ET E+ Q E K+ Q LR
Sbjct: 549 KSAVKRILAYTPCDVRGRLTGSNSDMASMFNETVEHTLQKSEDFTVKIKVIQDLREMTKK 608
Query: 998 LLRRLKADVEKQMPGKYEHIIYCRLSKRQ 1026
+L K D ++PG + + LS +Q
Sbjct: 609 VLHYYKGDFLDELPGLADFTVVLNLSPKQ 637
Score = 60.8 bits (146), Expect = 2e-08
Identities = 39/120 (32%), Positives = 57/120 (47%), Gaps = 5/120 (4%)
Query: 1326 GHRALIFTQMTKVLDILEQFLNFH-----GYLYMRLDGATKIEDRQILTERFNSDPRITV 1380
G + L+F+Q L LE+ G L G T E R+ E FNS P +
Sbjct: 710 GEKLLVFSQYLIPLKFLERLAALAKGWKLGKEVFVLTGNTSSEQREWSMETFNSSPDAKI 769
Query: 1381 FILSSRSGGLGINLTGADTVIFYDSDWNPAMDKQCQDRCHRIGQTRDVHIYRFVSDHTIE 1440
F S ++ G GI+L GA ++ D NP++ +Q R R GQ + VH YR ++ + E
Sbjct: 770 FFGSIKACGEGISLVGASRILILDVPLNPSVTRQAIGRAFRPGQKKMVHAYRLIAGSSPE 829
>At2g21450 [L] KOG0390 DNA repair protein SNF2 family
Length = 816
Score = 62.8 bits (151), Expect = 4e-09
Identities = 68/297 (22%), Positives = 130/297 (42%), Gaps = 40/297 (13%)
Query: 765 LRIYQKQGLNWLAS-LYNNKTNG-ILADEMGLGKTIQTISLL-AYLACEKENWGPHLIVV 821
+R +Q +G +L + L ++ G ILA G GKT IS L +++A + + L+V+
Sbjct: 265 MRPHQTEGFRFLCNNLAADEPGGCILAHAPGSGKTFLLISFLQSFMAMDPQ--ARPLVVL 322
Query: 822 PTSVLLNWEMEFKRF-APGFKVLTYYGSPQQRREKRKG----WNKPDAFH---------- 866
P ++ +W+ EF + +L +Y + R+++ W K +
Sbjct: 323 PKGIIESWKREFTLWEVEKIPLLDFYSVKAESRKQQLKVLGQWIKERSILFLGYQQFTRI 382
Query: 867 VCITSYQLVVHDQHSFKRKKWQYMILDEAHNIKNFRSTRWQALLNFNTERRLLLTGTPLQ 926
+C +++ D +K +ILDE H +N + +L T R+++LTGT Q
Sbjct: 383 ICDDNFEAASEDCKLILLEKPTLLILDEGHTSRNKETYMLSSLARVKTRRKVVLTGTLFQ 442
Query: 927 NNLAELWSLLYFLMPQTALENG------KVSGFADL----------DAFQQWFGRPVDKI 970
NN+ E++++L + P+ G ++ A++ + + F V+
Sbjct: 443 NNVEEVFNILDLVRPKFLKRPGTREIVSRIMSKAEIPRGKQVNQSSSSIEGTFFAAVELT 502
Query: 971 VETGENYEQDEETKKTVSKLHQVLRPYLLRRLKADVEKQMPGKYEHIIYCRLSKRQR 1027
++ N+ K ++ K + + +L KAD +PG E + LS QR
Sbjct: 503 LQRSTNF----SAKASLIKDLREMTRNILHYHKADFSGLLPGLSEFTVMLNLSSIQR 555
Score = 58.9 bits (141), Expect = 6e-08
Identities = 38/136 (27%), Positives = 65/136 (46%), Gaps = 5/136 (3%)
Query: 1326 GHRALIFTQMTKVLDILEQFLNFH-----GYLYMRLDGATKIEDRQILTERFNSDPRITV 1380
G + L+F+Q + LE+ ++ G + G + E R+ ERFN+ V
Sbjct: 636 GEKLLVFSQYIVPIKTLERLMSSMKGWRLGKEMFTITGDSSNEQREWSMERFNNSLEAKV 695
Query: 1381 FILSSRSGGLGINLTGADTVIFYDSDWNPAMDKQCQDRCHRIGQTRDVHIYRFVSDHTIE 1440
F S ++ G GI+L GA V+ D NP++ +Q R +R GQ R V+ Y+ V+ + E
Sbjct: 696 FFGSIKACGEGISLVGASRVLILDVHLNPSVTQQAVARAYRPGQKRKVYAYKLVAADSPE 755
Query: 1441 SNILKKANQKRHLDNV 1456
+ +K + +
Sbjct: 756 EENYETCTRKEMMSKM 771
>CE23294 [KL] KOG4439 RNA polymerase II transcription termination factor
TTF2/lodestar DEAD-box superfamily
Length = 540
Score = 61.6 bits (148), Expect = 9e-09
Identities = 53/202 (26%), Positives = 89/202 (43%), Gaps = 20/202 (9%)
Query: 768 YQKQGLNWLASLYNNK-TNGILADEMGLGKTIQTISLLA--YLACEK-----ENWGPHLI 819
+Q+ +W+ + + GIL G GKT I+L+ + C E P LI
Sbjct: 47 HQEAARDWMIDREAQEPSGGILGLAHGQGKTAIVIALILDQKIKCASNDKKFEQKSPTLI 106
Query: 820 VVPTSVLLNWEMEFKRFAP--GFKVLTYYGSPQQRREKRKGWNKPDAFHVCITSYQLV-V 876
+VP ++ W EFK V YY K ++ + V +T+Y+ V V
Sbjct: 107 IVPKRIIYQWYDEFKDRLEENALSVYLYYDDEFSEARKNISASELQKYDVVLTTYRNVPV 166
Query: 877 HDQHSFKRK---------KWQYMILDEAHNIKNFRSTRWQALLNFNTERRLLLTGTPLQN 927
++ K KW ++LDEAHNI++ + + A+ ++ R +T P QN
Sbjct: 167 KEKDETGEKVSKQVLQNIKWTRIVLDEAHNIRDSNTKKSTAIATLASKNRWCVTAAPFQN 226
Query: 928 NLAELWSLLYFLMPQTALENGK 949
+ ++ +L+ FL + EN K
Sbjct: 227 SEWDICNLILFLGNKPFGENVK 248
>At2g40770 [L] KOG0298 DEAD box-containing helicase-like transcription
factor/DNA repair protein
Length = 1648
Score = 60.1 bits (144), Expect = 3e-08
Identities = 40/134 (29%), Positives = 64/134 (46%), Gaps = 11/134 (8%)
Query: 1328 RALIFTQMTKVLDILEQFLNFHGYLYMRLDGA-------TKIEDRQILTERFNSDPR--- 1377
+ L+F+ VLD+LE + +R+ G +K + + T++ NS +
Sbjct: 1435 KVLVFSSWNDVLDVLEHAFAANSITCIRMKGGRKSQTAISKFKGSEKETQKTNSHQKEEK 1494
Query: 1378 -ITVFILSSRSGGLGINLTGADTVIFYDSDWNPAMDKQCQDRCHRIGQTRDVHIYRFVSD 1436
I V +L + G G+NL A VI + NPA + Q R HRIGQ + ++RF+
Sbjct: 1495 SIQVLLLLVQHGANGLNLLEAQHVILVEPLLNPAAEAQAVGRVHRIGQEKPTLVHRFLVS 1554
Query: 1437 HTIESNILKKANQK 1450
T+E +I K K
Sbjct: 1555 GTVEESIYKLNRNK 1568
>Hs17441908 [B] KOG1000 Chromatin remodeling protein HARP/SMARCAL1 DEAD-box
superfamily
Length = 215
Score = 57.4 bits (137), Expect = 2e-07
Identities = 44/141 (31%), Positives = 70/141 (49%), Gaps = 19/141 (13%)
Query: 792 MGLGKTIQTISLLAYLACEKENWGPHLIVVPTSVLLNWEMEFKRFAPGFKVLTYYGSPQQ 851
MGLGKTIQ I + + KE W P LIVVP+S+ W E +++ P SP++
Sbjct: 1 MGLGKTIQAIGITYFY---KEEW-PLLIVVPSSLRYPWTEEIEKWIPEL-------SPEE 49
Query: 852 RR--EKRKGWNKPDAFHVCITSYQLVVHDQ----HSFKRKKWQYMILDEAHNIKNFRSTR 905
+ + + V + Y L+ D + + ++ +I+DE+H +K+ +TR
Sbjct: 50 INVIQNKTDVRRMSTSKVTVLGYGLLTADAKTLIDALNNQNFKVVIVDESHYMKSRNATR 109
Query: 906 WQALLNF--NTERRLLLTGTP 924
+ LL R +LLTGTP
Sbjct: 110 SRILLPIVQKARRAILLTGTP 130
>At3g42670 [L] KOG0390 DNA repair protein SNF2 family
Length = 1256
Score = 55.5 bits (132), Expect = 7e-07
Identities = 67/277 (24%), Positives = 112/277 (40%), Gaps = 65/277 (23%)
Query: 729 ELKDEKAETT----ESVTSPAAADPLAVSDVP-----------VPSLLRGTLRIYQKQGL 773
++ ++ TT + V S P+A SD+P +P L R L ++QK+
Sbjct: 624 QINEDDINTTIVNQDGVESHTFTIPVASSDMPSAEESDNVWSLIPQLKR-KLHLHQKKAF 682
Query: 774 NWL------------ASLYNNKTNG-ILADEMGLGKTIQTISLLAYLACEKENWGPHLIV 820
+L ++K G +++ G GKT I+ LA P L++
Sbjct: 683 EFLWKNLAGSVVPAMMDPSSDKIGGCVVSHTPGAGKTFLIIAFLASYLKIFPGKRP-LVL 741
Query: 821 VPTSVLLNWEMEFKRFAPGFKVLTYYGSPQQRREKRK-----GWNKP--DAFHV--CI-- 869
P + L W EF ++ V +G K K G KP D HV C+
Sbjct: 742 APKTTLYTWYKEFIKWEIPVPVHLLHGRRTYCMSKEKTIQFEGIPKPSQDVMHVLDCLDK 801
Query: 870 ---------------TSYQLVVHDQHSFKRKKWQ---------YMILDEAHNIKNFRSTR 905
TS+ ++ + F +K+ ++LDE HN ++ +S
Sbjct: 802 IQKWHAQPSVLVMGYTSFLTLMREDSKFAHRKYMAKVLRESPGLLVLDEGHNPRSTKSRL 861
Query: 906 WQALLNFNTERRLLLTGTPLQNNLAELWSLLYFLMPQ 942
+AL+ +T+ R+LL+GT QNN E ++ L P+
Sbjct: 862 RKALMKVDTDLRILLSGTLFQNNFCEYFNTLCLARPK 898
Score = 53.5 bits (127), Expect = 3e-06
Identities = 33/121 (27%), Positives = 62/121 (50%), Gaps = 2/121 (1%)
Query: 1339 LDILEQFLNF-HGYLYMRLDGATKIEDRQILTERFNSDP-RITVFILSSRSGGLGINLTG 1396
L++ E + G + L G ++ +R + ++F + V + S + GI+LT
Sbjct: 1089 LELFENVFRWKRGRELLTLTGDLELFERGRVIDKFEEPGGQSRVLLASITACAEGISLTA 1148
Query: 1397 ADTVIFYDSDWNPAMDKQCQDRCHRIGQTRDVHIYRFVSDHTIESNILKKANQKRHLDNV 1456
A VI DS+WNP+ KQ R R GQ + V++Y+ +S T+E + ++ K + ++
Sbjct: 1149 ASRVIMLDSEWNPSKTKQAIARAFRPGQQKVVYVYQLLSRGTLEEDKYRRTTWKEWVSSM 1208
Query: 1457 V 1457
+
Sbjct: 1209 I 1209
>Hs22054523 [L] KOG0298 DEAD box-containing helicase-like transcription
factor/DNA repair protein
Length = 1669
Score = 54.3 bits (129), Expect = 2e-06
Identities = 34/116 (29%), Positives = 60/116 (51%), Gaps = 6/116 (5%)
Query: 1338 VLDILEQFLNFHGYLYMRLDGATKIEDRQILTERFNSDPRITVFILSSRSGGLGINLTGA 1397
VLDI+ + L + + ++ ++++ Q F DP+I + +L +G G+ + A
Sbjct: 1550 VLDIISKALTDNNMEFAQI---SRVKTFQENLSAFKRDPQINILLLPLHTGSNGLTIIEA 1606
Query: 1398 DTVIFYDSDWNPAMDKQCQDRCHRIGQTRDVHIYRFVSDHTIESN---ILKKANQK 1450
V+ + NPA + Q R HRIGQT+ ++RF+ TIE +LK A ++
Sbjct: 1607 THVLLVEPILNPAHELQAIGRVHRIGQTKPTIVHRFLIKATIEERMQAMLKTAERR 1662
>At5g20420 [L] KOG0390 DNA repair protein SNF2 family
Length = 1261
Score = 52.8 bits (125), Expect = 4e-06
Identities = 33/114 (28%), Positives = 61/114 (52%), Gaps = 2/114 (1%)
Query: 1354 MRLDGATKIEDRQILTERFNSDPRITVFILSSRSG-GLGINLTGADTVIFYDSDWNPAMD 1412
+ L G ++ +R + ++F + +L+S + GI+LT A VI DS+WNP+
Sbjct: 1111 LTLTGDLELFERGRVIDKFEEPGNPSRVLLASITACAEGISLTAASRVIMLDSEWNPSKT 1170
Query: 1413 KQCQDRCHRIGQTRDVHIYRFVSDHTIESNILKKANQKRHLDNVVIQTGDFTTD 1466
KQ R R GQ + V++Y+ +S T+E + ++ K + + +I + +F D
Sbjct: 1171 KQAIARAFRPGQQKVVYVYQLLSRGTLEEDKYRRTTWKEWV-SCMIFSEEFVAD 1223
Score = 51.6 bits (122), Expect = 1e-05
Identities = 48/192 (25%), Positives = 79/192 (41%), Gaps = 37/192 (19%)
Query: 787 ILADEMGLGKTIQTISLLAYLACEKENWGPHLIVVPTSVLLNWEMEFKRFAPGFKV---- 842
+++ G GKT I+ L P L++ P + L W EF ++ V
Sbjct: 714 VISHSPGAGKTFLIIAFLTSYLKLFPGKRP-LVLAPKTTLYTWYKEFIKWEIPVPVHLIH 772
Query: 843 --LTYYGSPQQRREKRKGWNKP--DAFHV--CI-----------------TSYQLVVHDQ 879
TY Q + + G KP D HV C+ TS+ ++ +
Sbjct: 773 GRRTYCTFKQNKTVQFNGVPKPSRDVMHVLDCLEKIQKWHAHPSVLVMGYTSFTTLMRED 832
Query: 880 HSFKRKKWQ---------YMILDEAHNIKNFRSTRWQALLNFNTERRLLLTGTPLQNNLA 930
F +K+ ++LDE HN ++ +S +AL+ T+ R+LL+GT QNN
Sbjct: 833 SKFAHRKYMAKVLRESPGLLVLDEGHNPRSTKSRLRKALMKVGTDLRILLSGTLFQNNFC 892
Query: 931 ELWSLLYFLMPQ 942
E ++ L P+
Sbjct: 893 EYFNTLCLARPK 904
>YLR247c [L] KOG0298 DEAD box-containing helicase-like transcription
factor/DNA repair protein
Length = 1556
Score = 51.6 bits (122), Expect = 1e-05
Identities = 29/118 (24%), Positives = 58/118 (48%), Gaps = 2/118 (1%)
Query: 1328 RALIFTQMTKVLDILEQFLNFHGYLYMRLDGATKIEDRQILTERFNSDPRITVFILSSRS 1387
+ ++++Q T+ L ++ + L + ++ T I F P +T +L+ ++
Sbjct: 1381 QVILYSQKTEYLKVIGKVLKLYHIEHLACLSNTANVGETI--NNFKRQPSVTCLLLNVKT 1438
Query: 1388 GGLGINLTGADTVIFYDSDWNPAMDKQCQDRCHRIGQTRDVHIYRFVSDHTIESNILK 1445
G G+NL A + D N + + Q R +RIGQ + ++ F+ +T+E NIL+
Sbjct: 1439 LGAGLNLINAKHIFLLDPILNNSDELQAMGRNNRIGQDEETFVWNFMIRNTVEENILR 1496
>7295362 [L] KOG0298 DEAD box-containing helicase-like transcription
factor/DNA repair protein
Length = 1270
Score = 51.6 bits (122), Expect = 1e-05
Identities = 31/117 (26%), Positives = 54/117 (45%), Gaps = 6/117 (5%)
Query: 1328 RALIFTQMTKVLDILEQFLNFHGYLYMRLDGATKIEDRQILTERFNSDPRITVFILSSRS 1387
+ ++F+Q +L + + L+ +G + +D + N +T ++
Sbjct: 1125 KIIVFSQWQAILIEIARALSLNGIQFRNKCTNKDFDDFK------NPLSNVTCLLMPLSK 1178
Query: 1388 GGLGINLTGADTVIFYDSDWNPAMDKQCQDRCHRIGQTRDVHIYRFVSDHTIESNIL 1444
G G+NL A V + NP ++Q R HR GQ R ++RF+ + TIE NIL
Sbjct: 1179 GSKGLNLIEATHVFLVEPILNPGDERQAIGRIHRFGQKRPTKVHRFIVNETIEENIL 1235
Database: KOG eukaryal database 04/03
Posted date: Apr 14, 2003 1:07 PM
Number of letters in database: 30,389,216
Number of sequences in database: 60,738
Lambda K H
0.315 0.132 0.375
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 84,550,311
Number of Sequences: 60738
Number of extensions: 3491423
Number of successful extensions: 10527
Number of sequences better than 1.0e-05: 160
Number of HSP's better than 0.0 without gapping: 153
Number of HSP's successfully gapped in prelim test: 7
Number of HSP's that attempted gapping in prelim test: 9556
Number of HSP's gapped (non-prelim): 487
length of query: 1572
length of database: 30,389,216
effective HSP length: 120
effective length of query: 1452
effective length of database: 23,100,656
effective search space: 33542152512
effective search space used: 33542152512
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)