ORF STATUS Function Best COG Functional category Pathways and functional systems
r_klactVI5979 suspect: Pn R KOG1721 General function prediction only FOG: Zn-finger
Only best alignment is shown:
BLASTP 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= r_klactVI5979 2087224 2086616 -203
(203 letters)
Database: KOG eukaryal database 04/03
60,738 sequences; 30,389,216 total letters
Searching..................................................done
Color Key for Alignment Scores: 
Score E
Sequences producing significant alignments: (bits) Value
YPR015c [R] KOG1721 FOG: Zn-finger 64 2e-10
YPR013c [R] KOG1721 FOG: Zn-finger 62 5e-10
SPAC25B8.19c [R] KOG1721 FOG: Zn-finger 56 4e-08
7300384 [R] KOG1721 FOG: Zn-finger 52 7e-07
SPAC144.09c [R] KOG1721 FOG: Zn-finger 50 2e-06
7297180 [R] KOG1721 FOG: Zn-finger 50 2e-06
Hs4885267 [R] KOG1721 FOG: Zn-finger 50 3e-06
CE24977 [R] KOG1721 FOG: Zn-finger 49 4e-06
Hs8922929 [R] KOG1721 FOG: Zn-finger 49 6e-06
Hs22054070 [R] KOG1721 FOG: Zn-finger 49 6e-06
Hs17442049 [R] KOG1721 FOG: Zn-finger 48 8e-06
>YPR015c [R] KOG1721 FOG: Zn-finger
Length = 247
Score = 63.5 bits (153), Expect = 2e-10
Identities = 27/43 (62%), Positives = 34/43 (78%)
Query: 152 GKEFSRPSTLKTHIVVHSQAKPFKCTYLDCNKSYNVKSNLRRH 194
GK SRPSTL+TH ++H+ PFKCT+ CNKS+NVKSN+ RH
Sbjct: 191 GKVCSRPSTLRTHYLIHTGDTPFKCTWEHCNKSFNVKSNMLRH 233
>YPR013c [R] KOG1721 FOG: Zn-finger
Length = 317
Score = 62.0 bits (149), Expect = 5e-10
Identities = 27/43 (62%), Positives = 33/43 (75%)
Query: 152 GKEFSRPSTLKTHIVVHSQAKPFKCTYLDCNKSYNVKSNLRRH 194
GK SRPSTLKTH ++H+ PFKCT+ C KS+NVKSN+ RH
Sbjct: 260 GKICSRPSTLKTHYLIHTGDTPFKCTWEGCTKSFNVKSNMLRH 302
>SPAC25B8.19c [R] KOG1721 FOG: Zn-finger
Length = 207
Score = 55.8 bits (133), Expect = 4e-08
Identities = 22/41 (53%), Positives = 30/41 (72%)
Query: 155 FSRPSTLKTHIVVHSQAKPFKCTYLDCNKSYNVKSNLRRHE 195
FSRPS+LK H H+ +PF C Y C K++NV+SN+RRH+
Sbjct: 162 FSRPSSLKIHTYSHTGERPFVCDYAGCGKAFNVRSNMRRHQ 202
>7300384 [R] KOG1721 FOG: Zn-finger
Length = 604
Score = 51.6 bits (122), Expect = 7e-07
Identities = 22/43 (51%), Positives = 31/43 (71%), Gaps = 2/43 (4%)
Query: 152 GKEFSRPSTLKTHIVVHSQAKPFKCTYLDCNKSYNVKSNLRRH 194
GK ++RPSTLKTH+ HS +P++C DCNKS++ +NL H
Sbjct: 443 GKTYARPSTLKTHLRTHSGERPYRCP--DCNKSFSQAANLTAH 483
>SPAC144.09c [R] KOG1721 FOG: Zn-finger
Length = 374
Score = 50.1 bits (118), Expect = 2e-06
Identities = 20/44 (45%), Positives = 31/44 (70%)
Query: 152 GKEFSRPSTLKTHIVVHSQAKPFKCTYLDCNKSYNVKSNLRRHE 195
GK++SRPS L+ H+ HS +PF C Y C+K++ KS+L+ H+
Sbjct: 31 GKKYSRPSLLEQHLRTHSNERPFVCDYTGCSKAFYRKSHLKIHK 74
>7297180 [R] KOG1721 FOG: Zn-finger
Length = 574
Score = 50.1 bits (118), Expect = 2e-06
Identities = 19/43 (44%), Positives = 30/43 (69%), Gaps = 2/43 (4%)
Query: 152 GKEFSRPSTLKTHIVVHSQAKPFKCTYLDCNKSYNVKSNLRRH 194
GK F R STL TH+++HS +P+ C Y C K ++ KS++++H
Sbjct: 398 GKRFKRSSTLSTHLLIHSDTRPYPCNY--CGKRFHQKSDMKKH 438
>Hs4885267 [R] KOG1721 FOG: Zn-finger
Length = 422
Score = 49.7 bits (117), Expect = 3e-06
Identities = 19/43 (44%), Positives = 30/43 (69%), Gaps = 2/43 (4%)
Query: 152 GKEFSRPSTLKTHIVVHSQAKPFKCTYLDCNKSYNVKSNLRRH 194
GK F R STL TH+++HS +P+ C Y C K ++ KS++++H
Sbjct: 318 GKSFKRSSTLSTHLLIHSDTRPYPCQY--CGKRFHQKSDMKKH 358
>CE24977 [R] KOG1721 FOG: Zn-finger
Length = 336
Score = 49.3 bits (116), Expect = 4e-06
Identities = 19/43 (44%), Positives = 30/43 (69%), Gaps = 2/43 (4%)
Query: 152 GKEFSRPSTLKTHIVVHSQAKPFKCTYLDCNKSYNVKSNLRRH 194
GK F R STL TH+++HS +P+ C Y C K ++ KS++++H
Sbjct: 160 GKTFKRSSTLSTHLLIHSDTRPYPCEY--CGKRFHQKSDMKKH 200
>Hs8922929 [R] KOG1721 FOG: Zn-finger
Length = 555
Score = 48.5 bits (114), Expect = 6e-06
Identities = 22/44 (50%), Positives = 31/44 (70%), Gaps = 2/44 (4%)
Query: 152 GKEFSRPSTLKTHIVVHSQAKPFKCTYLDCNKSYNVKSNLRRHE 195
GK FS S+L TH V+H+ KP+KC +C KS++V+ NL RH+
Sbjct: 474 GKGFSVHSSLTTHQVIHTGEKPYKCN--ECGKSFSVRPNLTRHQ 515
>Hs22054070 [R] KOG1721 FOG: Zn-finger
Length = 714
Score = 48.5 bits (114), Expect = 6e-06
Identities = 21/44 (47%), Positives = 30/44 (67%), Gaps = 2/44 (4%)
Query: 152 GKEFSRPSTLKTHIVVHSQAKPFKCTYLDCNKSYNVKSNLRRHE 195
GK FSR S L TH ++H+ KP++C DC K++N SNL +H+
Sbjct: 540 GKAFSRSSILTTHKIIHTGEKPYECE--DCGKAFNRSSNLTKHK 581
>Hs17442049 [R] KOG1721 FOG: Zn-finger
Length = 310
Score = 48.1 bits (113), Expect = 8e-06
Identities = 20/43 (46%), Positives = 27/43 (62%)
Query: 152 GKEFSRPSTLKTHIVVHSQAKPFKCTYLDCNKSYNVKSNLRRH 194
GK F S LK H +VH+ KPF+CT+ C K +++ NLR H
Sbjct: 223 GKAFVESSKLKRHFLVHTGEKPFRCTFEGCGKRFSLDFNLRTH 265
Database: KOG eukaryal database 04/03
Posted date: Apr 14, 2003 1:07 PM
Number of letters in database: 30,389,216
Number of sequences in database: 60,738
Lambda K H
0.316 0.133 0.396
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 11,182,698
Number of Sequences: 60738
Number of extensions: 415928
Number of successful extensions: 7549
Number of sequences better than 1.0e-05: 11
Number of HSP's better than 0.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 6
Number of HSP's that attempted gapping in prelim test: 7493
Number of HSP's gapped (non-prelim): 55
length of query: 203
length of database: 30,389,216
effective HSP length: 101
effective length of query: 102
effective length of database: 24,254,678
effective search space: 2473977156
effective search space used: 2473977156
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)