ORF STATUS Function Best COG Functional category Pathways and functional systems
r_klactVI6116 good E KOG3007 Amino acid transport and metabolism Mu-crystallin
Only best alignment is shown:
BLASTP 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= r_klactVI6116 2133136 2132135 -334
(334 letters)
Database: KOG eukaryal database 04/03
60,738 sequences; 30,389,216 total letters
Searching..................................................done
Color Key for Alignment Scores: 
Score E
Sequences producing significant alignments: (bits) Value
YGL159w [E] KOG3007 Mu-crystallin 220 3e-57
Hs4503065 [E] KOG3007 Mu-crystallin 67 3e-11
At5g52810 [E] KOG3007 Mu-crystallin 50 6e-06
SPAP11E10.01 [E] KOG3007 Mu-crystallin 49 8e-06
>YGL159w [E] KOG3007 Mu-crystallin
Length = 370
Score = 220 bits (560), Expect = 3e-57
Identities = 145/363 (39%), Positives = 208/363 (56%), Gaps = 37/363 (10%)
Query: 1 MSLKTLLDPQVKTHFLNLSRAEVISHLQALQDGLTRYSENPTIVPPRT--KVFTPRGDT- 57
M+ + D +V+ +LN S +I L +L + L YS+N I+ R K+ D+
Sbjct: 1 MNNSIITDDEVREFYLNCSSQTIIESLLSLHESLRLYSQNHEILLNRMFKKLDETNADSN 60
Query: 58 -MHMFMPVVDDVYCGVKTLGYNANSRVGFVGAINVLEPTTGLIQGVVDAKQVTGIRTALS 116
H+FMPVV + G+K L N N F G INV+EP TG + G +AKQ+T IRTAL+
Sbjct: 61 ISHIFMPVVSKDFSGIKILVNNNNKN--FQGVINVIEPETGKLIGCFEAKQITAIRTALA 118
Query: 117 SHIGLYK---VKH----KFDNIAKLNVTVFGTGLQAFWHSFVCSKLF-------SEKEIE 162
S IGLYK H +F+N +T FGTGLQAFWH ++ KL S K +E
Sbjct: 119 SCIGLYKQLSCSHDKLFRFEN-GTCYLTCFGTGLQAFWHIYIAIKLIMSGIVGESLKLVE 177
Query: 163 LNVVYRSSLLDEADLLGSCNNVKNIN--------YVKSDSEEVAGICNSSHVIFGTVPTS 214
+N++Y ++++ D L S N+ N + S E G ++S +IFG +PT
Sbjct: 178 INILYHNNMM-SLDRLKSLKNLFGSNIKIELNQYQINDISSEGNGAVSNSDIIFGCLPTL 236
Query: 215 SPSIFKKFF---QESSDIPFTYIGLIGSYQPHMHECDTELVSLFQ--KEDAKIIVDSKEH 269
P++F + + S + TYI LIGSY+P MHECD EL+ F+ E A I+VDS+EH
Sbjct: 237 EPNLFLRQLLNSKASVEQKHTYISLIGSYKPVMHECDKELIDKFKSDNESACILVDSREH 296
Query: 270 TLLEAGELITAKVEPSQLIEIGQLESVSSVKTEVLVG--SRSITLSKIVGLAIMDIVTAK 327
TLLE+GELI + + P LIEIG+L+++ + + R+ITL KIVGLA+MD+ AK
Sbjct: 297 TLLESGELIDSNIAPHNLIEIGELDTLKNTVLNLNEKGCKRTITLCKIVGLAVMDVALAK 356
Query: 328 KII 330
+ +
Sbjct: 357 EFL 359
>Hs4503065 [E] KOG3007 Mu-crystallin
Length = 314
Score = 67.4 bits (163), Expect = 3e-11
Identities = 83/331 (25%), Positives = 138/331 (41%), Gaps = 47/331 (14%)
Query: 18 LSRAEVISHLQA-------LQDGLTRYSENP---TIVPPRTKVFTPRGDTMHMFMPV--- 64
LS AEV HL++ L+ L +S P + P RT V + MP
Sbjct: 8 LSAAEVEEHLRSSSLLIPPLETALANFSSGPEGGVMQPVRTVVPVTKHRGYLGVMPAYSA 67
Query: 65 VDDVYCGVKTLGYNANSRVGFV----GAINVLEPTTGLIQGVVDAKQVTGIRTALSSHIG 120
+D Y V + + EP+ G + V+D +T RTA S I
Sbjct: 68 AEDALTTKLVTFYEDRGITSVVPSHQATVLLFEPSNGTLLAVMDGNVITAKRTAAVSAIA 127
Query: 121 LYKVKHKFDNIAKLNVTVFGTGLQAFWHSFVCSKLFSEKEIELNVVYRSSLLDEADLLGS 180
+K + + + G G+QA+ H + ++ FS KE+ + + + AD +
Sbjct: 128 TKFLKPPSSEV----LCILGAGVQAYSHYEIFTEQFSFKEVRIWNRTKENAEKFADTVQG 183
Query: 181 CNNVKNINYVKSDSEEVAGICNSSHVIFGTVPTSSPSIFKKFFQESSDIPFTYIGLIGSY 240
+ S E VAG + VI + P +F ++ + P +I +G+
Sbjct: 184 -----EVRVCSSVQEAVAG----ADVIITVTLATEPILFGEWVK-----PGAHINAVGAS 229
Query: 241 QPHMHECDTELVSLFQKEDAKIIVDSKEHTLLEAGELITAKVEPSQLIEIGQLESVSSVK 300
+P E D EL+ ++A + VDS+E L E+G+++ + E E+G E + VK
Sbjct: 230 RPDWRELDDELM-----KEAVLYVDSQEAALKESGDVLLSGAE--IFAELG--EVIKGVK 280
Query: 301 TEVLVGSRSITLSKIVGLAIMDIVTAKKIIE 331
T+ K +G+A+ D V AK I +
Sbjct: 281 P---AHCEKTTVFKSLGMAVEDTVAAKLIYD 308
>At5g52810 [E] KOG3007 Mu-crystallin
Length = 325
Score = 49.7 bits (117), Expect = 6e-06
Identities = 76/329 (23%), Positives = 137/329 (41%), Gaps = 37/329 (11%)
Query: 18 LSRAEVISHLQALQDGLTRYSENPTIVPPRTKVFTPRGDTMHMFMPVVDDV----YCGVK 73
LS +I+H + L ++S TI P + +T + + MP Y GVK
Sbjct: 17 LSHETLINHFRT---NLPKHSS--TITSPVRQNYTVSSPSSLLLMPSWSSSSSLPYMGVK 71
Query: 74 TLGY----NANSRVGFVGAINVLEPTTGLIQGVVDAKQVTGIRTALSSHIGLYKVKHKFD 129
+ Y ++ + G G+ + TTG +D +T RT+ S +G K+ + D
Sbjct: 72 LVTYFPHNSSQNLPGIHGSYTLFSSTTGQTLATMDGTVLTLYRTSSVSGLGS-KILARDD 130
Query: 130 NIAKLNVTVFGTGLQAFWHSFVCSKLFSEKEIELNVVYRSS---LLDEADLLGSCNNVKN 186
+ + V G A + S L ++ + +++ + + A+ L K
Sbjct: 131 SQVLIMV-----GSGALAPHLIKSHLAAKPSLRRVIIWNRTPQRAQELAETLSKDPQHKE 185
Query: 187 INYVKSDSEEVAGICNSSHVIFGTVPTSSPSIFKKFFQESSDIPFTYIGLIGSYQPHMHE 246
I++ DS + I +I ++ P + +F + P T++ L+GS+ M E
Sbjct: 186 ISFDSHDSLDQ--IIPLGDIISCATNSTVPLVKGEFLK-----PGTHLDLVGSFSHEMKE 238
Query: 247 CDTELVSLFQKEDAKIIVDSKEHTLLEAGELITAKVEPSQLIE--IGQLESVSSVKTEVL 304
CD + + + VD+ + ++EAGEL A E G L + E
Sbjct: 239 CDDNAI-----QRGSVFVDN-DTAMIEAGELAGAFERGVIKREDICGNLVELIKGDKEGR 292
Query: 305 VGSRSITLSKIVGLAIMDIVTAKKIIEDH 333
S IT+ K VG +D++TA+ + E +
Sbjct: 293 KSSTDITVFKSVGSGTVDLLTAQLVHETY 321
>SPAP11E10.01 [E] KOG3007 Mu-crystallin
Length = 330
Score = 49.3 bits (116), Expect = 8e-06
Identities = 38/128 (29%), Positives = 68/128 (52%), Gaps = 12/128 (9%)
Query: 214 SSPSIFKKFFQESSDI-PFTYIGLIGSYQPHMHECDTELVSLFQKEDAKIIVDSKEHTLL 272
SS ++ KK S I P T+I L+G + PHMHE D++ + + + + VD+++ L
Sbjct: 205 SSATLSKKPIIVGSWINPGTHIDLVGGFTPHMHEADSKCIQI-----SNVFVDTRKGALH 259
Query: 273 EAGELITAKVE----PSQLIE--IGQLESVSSVKTEVLVGSRSITLSKIVGLAIMDIVTA 326
EAG+L+T E P+++I + S ++++ + +ITL K VG + D+ A
Sbjct: 260 EAGDLLTPIKEGLFSPNEVIADLFDLCNNKHSGRSQLKNPAEAITLFKSVGDSREDLAAA 319
Query: 327 KKIIEDHH 334
+ H+
Sbjct: 320 SLAYKVHN 327
Database: KOG eukaryal database 04/03
Posted date: Apr 14, 2003 1:07 PM
Number of letters in database: 30,389,216
Number of sequences in database: 60,738
Lambda K H
0.318 0.135 0.381
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 18,677,408
Number of Sequences: 60738
Number of extensions: 788112
Number of successful extensions: 1887
Number of sequences better than 1.0e-05: 4
Number of HSP's better than 0.0 without gapping: 1
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 1874
Number of HSP's gapped (non-prelim): 4
length of query: 334
length of database: 30,389,216
effective HSP length: 107
effective length of query: 227
effective length of database: 23,890,250
effective search space: 5423086750
effective search space used: 5423086750
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)