ORF STATUS Function Best COG Functional category Pathways and functional systems
r_klactVI6254 good K KOG2588 Transcription Predicted DNA-binding protein
Only best alignment is shown:
BLASTP 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= r_klactVI6254 2179804 2178962 -281
(281 letters)
Database: KOG eukaryal database 04/03
60,738 sequences; 30,389,216 total letters
Searching..................................................done
Color Key for Alignment Scores: 
Score E
Sequences producing significant alignments: (bits) Value
YOR344c [K] KOG2588 Predicted DNA-binding protein 140 2e-33
YOR032c [K] KOG2588 Predicted DNA-binding protein 60 3e-09
SPBC354.05c [K] KOG2588 Predicted DNA-binding protein 55 9e-08
SPBC19C2.09 [K] KOG2588 Predicted DNA-binding protein 54 2e-07
Hs7242207 [K] KOG2588 Predicted DNA-binding protein 51 2e-06
7293746 [K] KOG2588 Predicted DNA-binding protein 50 5e-06
Hs4759170 [K] KOG2588 Predicted DNA-binding protein 49 6e-06
>YOR344c [K] KOG2588 Predicted DNA-binding protein
Length = 291
Score = 140 bits (354), Expect = 2e-33
Identities = 93/217 (42%), Positives = 118/217 (53%), Gaps = 27/217 (12%)
Query: 70 AMFDSDLLLNNQDTLDSSTAFTIGNNVSEENSPLMNATNPDNGFDFEKNQFTQLPLAAES 129
A+F +D +N + S + E+++ L A DFE +P
Sbjct: 87 ALFPTDQFFSNPSSYSHSPEVSSSIKREEDDNALSLA-------DFEPASLQLMP----- 134
Query: 130 TDLPTLDSVEIDNDLQVKIEDGEEVKKPKKRATQKPQNKKRGSRKRLTADQRVTHNMIEK 189
++ D+ + L+ +IE + K A + KKR RKRLT Q+ HN IEK
Sbjct: 135 -NMINTDNNDDSTPLKNEIELNDSFIKTNLDAKE---TKKRAPRKRLTPFQKQAHNKIEK 190
Query: 190 RYRININTKIGKLQKIIPWVACEDTAFVVDNKVLSAGED-----------SLPLKKVKLN 238
RYRININTKI +LQ+IIPWVA E TAF V + V ED S KLN
Sbjct: 191 RYRININTKIARLQQIIPWVASEQTAFEVGDSVKKQDEDGAETAATTPLPSAAATSTKLN 250
Query: 239 KSMILEKAVDYILYLQNNERLFELEVQRLRKEINELK 275
KSMILEKAVDYILYLQNNERL+E+EVQRL+ EI+ LK
Sbjct: 251 KSMILEKAVDYILYLQNNERLYEMEVQRLKSEIDTLK 287
>YOR032c [K] KOG2588 Predicted DNA-binding protein
Length = 434
Score = 60.1 bits (144), Expect = 3e-09
Identities = 56/214 (26%), Positives = 98/214 (45%), Gaps = 22/214 (10%)
Query: 73 DSDLLLNNQDTLDSSTAFTIGNNV-----SEENSPLMNATNPDNGFDFEKNQFTQ----L 123
DS+ ++N + S I N SE++S L++A + +K Q + L
Sbjct: 157 DSEEYIDNMEVFSSEENENIDNVKQTDLKSEKDSSLLSAASI-----VKKEQLSGFENFL 211
Query: 124 PLAAESTDLPTLDSVEIDNDLQVKIEDGEEVKKPKKRATQKPQNKKRGSRKRLTADQRVT 183
PL+ + L T D ++ +L+ I++ + + K + + + R RV+
Sbjct: 212 PLSKTESPLVTADEIKSSLNLE-NIDNADSMSFKLKTSPIRKHFHVKPKRITRVRTGRVS 270
Query: 184 HNMIEKRYRININTKIGKLQKIIPWVACEDTAFVVDNKVLSAGEDSLPL----KKVKLNK 239
HN+IEK+YR NIN KI +L++ +P + A+ N + D L KLNK
Sbjct: 271 HNIIEKKYRSNINDKIEQLRRTVPTLR---VAYKKCNDLPITSRDLADLDGLEPATKLNK 327
Query: 240 SMILEKAVDYILYLQNNERLFELEVQRLRKEINE 273
+ IL K+++YI +L+ L Q L + +
Sbjct: 328 ASILTKSIEYICHLERKCLQLSLANQHLSNDTRD 361
>SPBC354.05c [K] KOG2588 Predicted DNA-binding protein
Length = 793
Score = 55.5 bits (132), Expect = 9e-08
Identities = 35/94 (37%), Positives = 52/94 (55%), Gaps = 5/94 (5%)
Query: 180 QRVTHNMIEKRYRININTKIGKLQKIIPWVACEDTAFVVDNKVLSAGEDSLPLKKVKLNK 239
+R HNMIEKRYR N+N KI +L+ +P + + D +PL + KLNK
Sbjct: 427 KRSAHNMIEKRYRSNLNDKIAELRDAVPTLRSGYNSTTAD----ELKGTYVPLSR-KLNK 481
Query: 240 SMILEKAVDYILYLQNNERLFELEVQRLRKEINE 273
+ IL KA +YI LQ+ + E + L+K ++E
Sbjct: 482 ATILSKATEYIKSLQSKNKKLIEENKILQKRLSE 515
>SPBC19C2.09 [K] KOG2588 Predicted DNA-binding protein
Length = 900
Score = 53.9 bits (128), Expect = 2e-07
Identities = 49/199 (24%), Positives = 87/199 (43%), Gaps = 20/199 (10%)
Query: 77 LLNNQDTLDSSTAFTIGNNVSEENSPLMNATNPDNGFDFEKNQFTQLPLAAESTDLPTLD 136
+L++ DT+D ST +N P + +NP+ K + P+ P+
Sbjct: 168 ILHSVDTIDPSTV---------QNYPSADMSNPEVKL---KTEEIITPMDTTCKPEPSAK 215
Query: 137 SVEID--NDLQVKIEDGEEVKKPKKRATQKPQNKKRGSRKRLTADQRVTHNMIEKRYRIN 194
+++ ++ I + PK R + P ++ HNMIEKRYR N
Sbjct: 216 KIKLSPSSEDSCSIPETLPFSAPKSRGSLSPSETPDFVAGPGGKPKKTAHNMIEKRYRTN 275
Query: 195 INTKIGKLQKIIPWVACEDTAFVVDNKVLSAGEDSLPLKKVKLNKSMILEKAVDYILYLQ 254
+N +I +L+ +P + A N + L + KLNK IL KA +YI +L+
Sbjct: 276 LNDRICELRDAVPSLRAA-AALRCGNSLDDEDLGGLTPAR-KLNKGTILAKATEYIRHLE 333
Query: 255 NNERLFELEVQRLRKEINE 273
+ E+Q+ K++++
Sbjct: 334 AKNK----ELQKTNKQLSD 348
>Hs7242207 [K] KOG2588 Predicted DNA-binding protein
Length = 1147
Score = 51.2 bits (121), Expect = 2e-06
Identities = 31/98 (31%), Positives = 50/98 (50%), Gaps = 24/98 (24%)
Query: 179 DQRVTHNMIEKRYRININTKIGKLQKIIPWVACEDTAFVVDNKVLSAGEDSLPLKKVKLN 238
++R HN IEKRYR +IN KI +L+ ++ + KLN
Sbjct: 323 EKRTAHNAIEKRYRSSINDKIIELKDLVVGT------------------------EAKLN 358
Query: 239 KSMILEKAVDYILYLQNNERLFELEVQRLRKEINELKA 276
KS +L KA+DYI +LQ++ + + E LR +++ K+
Sbjct: 359 KSAVLRKAIDYIRFLQHSNQKLKQENLSLRTAVHKSKS 396
>7293746 [K] KOG2588 Predicted DNA-binding protein
Length = 1113
Score = 49.7 bits (117), Expect = 5e-06
Identities = 31/92 (33%), Positives = 47/92 (50%), Gaps = 24/92 (26%)
Query: 180 QRVTHNMIEKRYRININTKIGKLQKIIPWVACEDTAFVVDNKVLSAGEDSLPLKKVKLNK 239
+R HN IE+RYR +IN KI +L+ ++ GE + KLNK
Sbjct: 284 KRSAHNAIERRYRTSINDKINELKNLV------------------VGEQA------KLNK 319
Query: 240 SMILEKAVDYILYLQNNERLFELEVQRLRKEI 271
S +L K++D I LQ + E+QRL++E+
Sbjct: 320 SAVLRKSIDKIRDLQRQNHDLKAELQRLQREL 351
>Hs4759170 [K] KOG2588 Predicted DNA-binding protein
Length = 1141
Score = 49.3 bits (116), Expect = 6e-06
Identities = 36/98 (36%), Positives = 52/98 (52%), Gaps = 26/98 (26%)
Query: 179 DQRVTHNMIEKRYRININTKIGKLQKIIPWVACEDTAFVVDNKVLSAGEDSLPLKKVKLN 238
++R THN+IEKRYR +IN KI ++ K L G D+ K++
Sbjct: 330 ERRTTHNIIEKRYRSSINDKI------------------IELKDLVMGTDA------KMH 365
Query: 239 KSMILEKAVDYILYLQ--NNERLFELEVQRLRKEINEL 274
KS +L KA+DYI YLQ N++ E V +L + N+L
Sbjct: 366 KSGVLRKAIDYIKYLQQVNHKLRQENMVLKLANQKNKL 403
Database: KOG eukaryal database 04/03
Posted date: Apr 14, 2003 1:07 PM
Number of letters in database: 30,389,216
Number of sequences in database: 60,738
Lambda K H
0.311 0.129 0.358
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 15,738,394
Number of Sequences: 60738
Number of extensions: 652984
Number of successful extensions: 2428
Number of sequences better than 1.0e-05: 7
Number of HSP's better than 0.0 without gapping: 1
Number of HSP's successfully gapped in prelim test: 6
Number of HSP's that attempted gapping in prelim test: 2418
Number of HSP's gapped (non-prelim): 9
length of query: 281
length of database: 30,389,216
effective HSP length: 105
effective length of query: 176
effective length of database: 24,011,726
effective search space: 4226063776
effective search space used: 4226063776
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)