ORF STATUS Function Best COG Functional category Pathways and functional systems
r_klactVI6272 good L KOG2093 Replication, recombination and repair Translesion DNA polymerase - REV1 deoxycytidyl transferase
Only best alignment is shown:
BLASTP 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= r_klactVI6272 2181986 2184472 829
(829 letters)
Database: KOG eukaryal database 04/03
60,738 sequences; 30,389,216 total letters
Searching..................................................done
Color Key for Alignment Scores: 
Score E
Sequences producing significant alignments: (bits) Value
YOR346w [L] KOG2093 Translesion DNA polymerase - REV1 deoxycytid... 564 e-160
CE01721 [L] KOG2093 Translesion DNA polymerase - REV1 deoxycytid... 236 8e-62
7291986 [L] KOG2093 Translesion DNA polymerase - REV1 deoxycytid... 189 2e-47
Hs7706681 [L] KOG2093 Translesion DNA polymerase - REV1 deoxycyt... 167 8e-41
At5g44750 [L] KOG2093 Translesion DNA polymerase - REV1 deoxycyt... 120 1e-26
SPCC553.07c [L] KOG2094 Predicted DNA damage inducible protein 79 4e-14
At1g49980 [L] KOG2094 Predicted DNA damage inducible protein 62 5e-09
Hs7705344 [L] KOG2094 Predicted DNA damage inducible protein 51 6e-06
>YOR346w [L] KOG2093 Translesion DNA polymerase - REV1 deoxycytidyl
transferase
Length = 985
Score = 564 bits (1454), Expect = e-160
Identities = 314/844 (37%), Positives = 478/844 (56%), Gaps = 70/844 (8%)
Query: 36 FHNKELQQLESDVQFRQKYQKEHRVSNPTLFQGCTIYVNGRTNPTRFQLHKLIILHGGTF 95
FH K Q D + +Y+ + + +F+ C IY+NG T P R QLH++I+LHGG F
Sbjct: 136 FHEKAHGQTLQDQILKDQYKDQISSQSSKIFKNCVIYINGYTKPGRLQLHEMIVLHGGKF 195
Query: 96 KHYLSGKTAVTHILATELNASKKSSFANFKVVSPEWVTESIARGKLLPWQDFRIV-QVSR 154
HYLS K VTHI+A+ L K+ FAN+KVVSP+W+ +S+ +LLPWQ++ + ++
Sbjct: 196 LHYLSSKKTVTHIVASNLPLKKRIEFANYKVVSPDWIVDSVKEARLLPWQNYSLTSKLDE 255
Query: 155 LQGKITDFATVRN-----------------------------------------CMDPNF 173
Q K+ + TV + C DP+F
Sbjct: 256 QQKKLDNCKTVNSIPLPSETSLHKGSKCVGSALLPVEQQSPVNLNNLEAKRIVACDDPDF 315
Query: 174 INAFFKSSRLHHLSNWKFQLRDNFVKEFILSYNDTIPDQKYVYFHIDFDCFFAQVS---- 229
+ ++F SRLHHLS WK L+D F+ E I Y Y+ FHIDFDCFFA V+
Sbjct: 316 LTSYFAHSRLHHLSAWKANLKDKFLNENIHKYTKITDKDTYIIFHIDFDCFFATVAYLCR 375
Query: 230 AKIDGKYDIHATPIAISHGINNSDISSCNYVARSFGVYNGMWVSSALKLCPD---LKILD 286
+ D PI + HG NSDI+SCNYVARS+G+ NGMWVS A K+ P+ L L
Sbjct: 376 SSSFSACDFKRDPIVVCHGTKNSDIASCNYVARSYGIKNGMWVSQAEKMLPNGIKLISLP 435
Query: 287 YEFDEYEAISNLFYSALKDIGIFKMVLPISIDEAIGCMLITPDI---TSELLTQKCMQVR 343
Y F++++ S FYS LK + IF ++LPISIDEA+ C+ I PD T+ L + C ++R
Sbjct: 436 YTFEQFQLKSEAFYSTLKRLNIFNLILPISIDEAV-CVRIIPDNIHNTNTLNARLCEEIR 494
Query: 344 NAVYNVTQGYSVSVGCGPSVLLARLALRKGKPNGFHISWFDTVTECHAFIDHFKLKDLPG 403
++ T G +VS+GC S++LARLAL+ KPNG++I++ ++E F FKL DLPG
Sbjct: 495 QEIFQGTNGCTVSIGCSDSLVLARLALKMAKPNGYNITFKSNLSE--EFWSSFKLDDLPG 552
Query: 404 IGYSTDLKIKEQFGNVQNISDLRDLLERPSNVSKLIKVIGSKNTKKLQIYLDGKDDDESI 463
+G+ST +++ F + +++DLR + + L +GSK K+ + L G+DD+ES+
Sbjct: 553 VGHSTLSRLESTFDSPHSLNDLR----KRYTLDALKASVGSKLGMKIHLALQGQDDEESL 608
Query: 464 SMVKDPHTYFQKKSLSVEINYAIRFKTIDDVDIFLERLALHLWEKLRDSNLMTRQITLKL 523
++ DP Q+KSLS++IN+ IRFK I VD+F+ER +L EKL + N T QITLKL
Sbjct: 609 KILYDPKEVLQRKSLSIDINWGIRFKNITQVDLFIERGCQYLLEKLNEINKTTSQITLKL 668
Query: 524 MKRAQGAPVDPPKFMGMGKCDALSKVSNLGTNTQKFGTIASECKTLFRILSVPPEEVRGI 583
M+R + AP++PPK+MGMG+CD+ S+ S LG T +FG IA+E K+L+R L PP E+RG+
Sbjct: 669 MRRCKDAPIEPPKYMGMGRCDSFSRSSRLGIPTNEFGIIATEMKSLYRTLGCPPMELRGL 728
Query: 584 GIQFHRLTD---SNQKVGQKSEQREITTDLFRKRDHPDDDITNEPSKVAEPHTPVNPTYT 640
+QF++L D N ++ + + I T+ R + +D+ N+ + E
Sbjct: 729 ALQFNKLVDVGPDNNQLKLRLPFKTIVTN--RAFEALPEDVKNDINNEFEKRNYKRKESG 786
Query: 641 SPVKNYWDRHLKRSITPFQY-DFPDQLDPEFMSNLPKDVQEEITSHHKVVKKANRSLRTK 699
+ + +I+ + D P ++ +FM+ LP ++ E+ ++ KK ++
Sbjct: 787 LTSNSLSSKKKGFAISRLEVNDLPSTMEEQFMNELPTQIRAEVRHDLRIQKKIQQTKLGN 846
Query: 700 LYD--DPRKQIKQTQDLHFIHDGRLVPQLSFQGLSSAKQISETLIDWVDATVED-GPHEK 756
L + R++ Q + HF+ + + FQ L+ K+I + + WV T+ D GPHEK
Sbjct: 847 LQEKIKRREESLQNEKNHFMGQNSIFQPIKFQNLTRFKKICQLVKQWVAETLGDGGPHEK 906
Query: 757 DLELFTSYLDKLAEQGRCHIILHLIKTIKNRVD--DHYNANHEGLEQWEYFLIRRLIPIL 814
D++LF YL KL + R H++LHL I ++ N +H G + WE L+ +IP+L
Sbjct: 907 DVKLFVKYLIKLCDSNRVHLVLHLSNLISRELNLCAFLNQDHSGFQTWERILLNDIIPLL 966
Query: 815 NKAK 818
N+ K
Sbjct: 967 NRNK 970
>CE01721 [L] KOG2093 Translesion DNA polymerase - REV1 deoxycytidyl
transferase
Length = 1027
Score = 236 bits (603), Expect = 8e-62
Identities = 185/601 (30%), Positives = 287/601 (46%), Gaps = 89/601 (14%)
Query: 54 YQKEHRVSNPT-----LFQGCTIYVNGRTNPTRFQLHKLIILHGGTF----KHYLSGKTA 104
+Q H + P + +G +++VNG T+P + L+I HGG + +H ++ T
Sbjct: 239 HQVNHGYAKPLENVSRIMEGFSVFVNGYTDPPALVIRDLMISHGGEYHCYYQHGITSYTI 298
Query: 105 VTHILATELNASKKSSFANFKVVSPEWVTESIARGKLLPWQDFRIVQVSRLQ-GKITDFA 163
+ I ++N +++ + +W+TESIA GK L ++DF I + ++ G++ F
Sbjct: 299 ASSIATAKINRIRENEI----FIKADWITESIAAGKPLDYRDFLIYEKGSVEKGQMQQFL 354
Query: 164 TVR-----------------NCMDPNFINAFFKSSRLHHLSNWKFQLRDNFV-------- 198
T+ + +PNFI ++ SRLH +S ++D FV
Sbjct: 355 TISTRNTGGNNETTSSNQFSDARNPNFIRDYYARSRLHLISTLAQDMKD-FVANLKLEGK 413
Query: 199 --------KEFI--LSYNDTIPDQKYVYFHIDFDCFFAQVSAKIDGKYDIHATPIAISHG 248
KE I S ++ I + V FH+D DCFF VS + + D+ +AI+H
Sbjct: 414 LTEKCFEEKELIDMKSLSNEISRESTV-FHVDLDCFF--VSVAVRNRIDLKHKEVAITHS 470
Query: 249 ---INNS--DISSCNYVARSFGVYNGMWVSSALKLCPDLKILDYEFDEYEAISNLFYSAL 303
I+NS +++SC+Y AR GV NGM V AL+ CP L +L Y+F++Y +S Y L
Sbjct: 471 KGTISNSMSEVASCSYAARDCGVKNGMLVRDALQKCPQLTLLPYQFEDYVQVSRKIYEIL 530
Query: 304 KDIGIFKMVLPISIDEAIGCM--------LITPDITSELLTQKCMQVRNAVYNVTQGYSV 355
+ V +S DE M + P I +E +R + TQ
Sbjct: 531 ASYTL--EVRAVSCDEMYINMSSFCEKYEINDPTILAE-------HIRKVIREKTQ-CPA 580
Query: 356 SVGCGPSVLLARLALRKGKPNGFHISWFDTVTECHAFIDHFKLKDLPGIGYSTDLKIKEQ 415
SVG G + LLARLA R KP+G + W + + + FI K+KDLPG GY ++
Sbjct: 581 SVGIGSTSLLARLATRHAKPDG--VFWVNAHKK-NEFISEEKVKDLPGFGYEMMNRLTSF 637
Query: 416 FGNVQNISDLRDLLERPSNVSKLIKVIGSKNTKKLQIYLDGKDDDESISMVKDPHTYFQK 475
FG++ +L+ ER +L+ V G K K+ G ++D D +
Sbjct: 638 FGDITKCRELQLKTER-----ELVPVFGPKLASKILRQCRGIEEDPD-----DFWATHVR 687
Query: 476 KSLSVEINYAIRFKTIDDVDIFLERLALHLWEKLRDSNLMTRQITLKLMKRAQGAPVDPP 535
KS+S +INY IRF +V + + L KL DS L ITLKLM R+ AP+
Sbjct: 688 KSVSCDINYGIRFTKRGEVIQLMTAIGAELERKLIDSKLTAGSITLKLMVRSANAPIQTS 747
Query: 536 KFMGMGKCDALSKVSNLGTNTQKFGTIASECKTLFRILSVPPEEVRGIGIQFHRLTDSNQ 595
KFMG G CD +K NL T + ++ SE L+ +S E++RG+G+ +L +
Sbjct: 748 KFMGHGICDTFTKTCNLNVPTTRGESLTSEAMKLYAKVSPKVEDLRGVGVTCGKLKSKLK 807
Query: 596 K 596
K
Sbjct: 808 K 808
>7291986 [L] KOG2093 Translesion DNA polymerase - REV1 deoxycytidyl
transferase
Length = 995
Score = 189 bits (480), Expect = 2e-47
Identities = 163/629 (25%), Positives = 280/629 (43%), Gaps = 121/629 (19%)
Query: 151 QVSRLQGKITDFATVRNCMDPNFINAFFKSSRLHHLSN-------WKFQLRDNF------ 197
+++ L + T R DPNF++ F+K+SRLHH++ + +LR
Sbjct: 196 KITNLSTTSNNSTTARTAADPNFLSEFYKNSRLHHIATLGAGFKQYVCRLRQKHGTQGFP 255
Query: 198 ----VKEFILSYNDTIPDQKYVYFHIDFDCFFAQVSAKIDGKYDIHATPIAISHG----- 248
+K S+++ + ++YV HID DCFF V + + ++ PIA++H
Sbjct: 256 KRETLKSLANSHHNCL--ERYV-MHIDMDCFFVSVGLRT--RPELRGLPIAVTHSKGGNA 310
Query: 249 -------------------------------------------INNSDISSCNYVARSFG 265
++ S+I+SC+Y AR G
Sbjct: 311 ATDVPVHPQADRKAELELFAQRFEHHFHDGDKAEKVRSGFDKKMSLSEIASCSYEAREKG 370
Query: 266 VYNGMWVSSALKLCPDLKILDYEFDEYEAISNLFYSALKDIGIFKMVLPISIDEAIGCML 325
+ NGM+V ALKLCP+LK + Y+F+ Y+ ++ Y + + + +S DE +
Sbjct: 371 IRNGMFVGQALKLCPELKTIPYDFEGYKEVAFTLYDTVAQYTL--NIEAVSCDEMF---V 425
Query: 326 ITPDITSEL---LTQKCMQVRNAVYNVTQGYSVSVGCGPSVLLARLALRKGKPNGFHISW 382
D+ EL + +R VY+ T G S G + LLAR+A ++ KPNG +
Sbjct: 426 ELTDLAHELNVDVMAFVSHLRQEVYSKT-GCPCSAGVAGNKLLARMATKEAKPNGQFL-- 482
Query: 383 FDTVTECHAFIDHFKLKDLPGIGYSTDLKIKEQFGNVQNISDLRDLLERPSNVSKLIKVI 442
D+ + A++ L LPG+G S K+K+ + N D+++ + + K+ KV+
Sbjct: 483 LDSSNDILAYMAPMSLDLLPGVGSSISHKLKQ--AGLNNCGDVQN-----TTLEKMEKVL 535
Query: 443 GSKNTKKLQIYLDGKDDDESISMVKDPHTYFQ-KKSLSVEINYAIRFKTIDDVDIFLERL 501
G K + L G DD P Y Q +K++S E+N+ IRF + + FL +L
Sbjct: 536 GKKLGQNLFQNCRGIDDR--------PLAYEQIRKTVSAEMNFGIRFTNSVECEQFLCQL 587
Query: 502 ALHLWEKLRDSNLMTRQITLKLMKRAQGAPVDPPKFMGMGKCDALSKVSNLGTNTQKFGT 561
+ + ++L + R I LK+M RA APV+ K+MG G CD ++K S + T
Sbjct: 588 SEEVTKRLVEIRRKARSINLKIMVRAAEAPVETSKYMGHGVCDIINKSSLIKYATDDVNV 647
Query: 562 IASECKTLFRILSVPPEEVRGIGIQFHRLTDSNQ------------KVGQKSEQREITTD 609
I + L + +PP+E+RG+GI RL D+N+ K+ + + + I
Sbjct: 648 ITTVVLDLMKDADIPPDELRGLGIHLTRLEDANEVRKENNIKEMFGKMSEMRKDKPIPQG 707
Query: 610 LFRKRDHPDDDIT-----------NEPSKVAEPHTPVNPTYTSPVKNYWDRHLKRSITPF 658
+ DD + EP V T + S ++ R + IT
Sbjct: 708 AVGDKSIGDDKVNKPLVFENKPKPREPRNVLSMLTAAAVSRKSVTEDRSQRGTSKPITR- 766
Query: 659 QYDFPDQLDPEFMSNLPKDVQEEITSHHK 687
+LD + ++ LP+D++ E+ ++ +
Sbjct: 767 PLSLVPKLDEDVLAQLPEDIRLEVIANRE 795
Score = 63.5 bits (153), Expect = 1e-09
Identities = 30/83 (36%), Positives = 54/83 (64%), Gaps = 2/83 (2%)
Query: 65 LFQGCTIYVNGRTNPTRFQLHKLIILHGGTFKHYLSGKTAVTHILATELNASKKSSFANF 124
LFQG +I+VNGRT+P+ +L +++++HGGTF HY T T+I+A+ L K +
Sbjct: 39 LFQGISIFVNGRTDPSADELKRIMMVHGGTFHHYERSHT--TYIIASVLPDVKVRNMNLS 96
Query: 125 KVVSPEWVTESIARGKLLPWQDF 147
K +S +WV + + + K++ ++ +
Sbjct: 97 KFISAKWVVDCLEKKKIVDYKPY 119
>Hs7706681 [L] KOG2093 Translesion DNA polymerase - REV1 deoxycytidyl
transferase
Length = 1251
Score = 167 bits (422), Expect = 8e-41
Identities = 138/510 (27%), Positives = 227/510 (44%), Gaps = 111/510 (21%)
Query: 170 DPNFINAFFKSSRLHHLSNWKFQLRDNFVKEFILSYNDTIPDQKYV-------------- 215
D NFI+ F+ SRLHH+S WK +L + FV N P ++ +
Sbjct: 345 DCNFISNFYSHSRLHHISMWKCELTE-FVNTLQRQSNGIFPGREKLKKMKTGRSALVVTD 403
Query: 216 ---------------YFHIDFDCFFAQVSAKIDGKYDIHATPIAI--------------- 245
H+D DCFF VS I + D+ P+A+
Sbjct: 404 TGDMSVLNSPRHQSCIMHVDMDCFF--VSVGIRNRPDLKGKPVAVTSNRGTGRAPLRPGA 461
Query: 246 ----------------------------------SHGINN----SDISSCNYVARSFGVY 267
++GI++ ++I+SC+Y AR G+
Sbjct: 462 NPQLEWQYYQNKILKGKAADIPDSSLWENPDSAQANGIDSVLSRAEIASCSYEARQLGIK 521
Query: 268 NGMWVSSALKLCPDLKILDYEFDEYEAISNLFYSALKDIGIFKMVLPISIDEAIGCMLIT 327
NGM+ A +LCP+L+ + Y+F Y+ ++ Y L + +S DEA+ + IT
Sbjct: 522 NGMFFGHAKQLCPNLQAVPYDFHAYKEVAQTLYETLASYT--HNIEAVSCDEAL--VDIT 577
Query: 328 PDITSELLT--QKCMQVRNAVYNVTQGYSVSVGCGPSVLLARLALRKGKPNG-FHISWFD 384
+ LT + VR + + T+ + SVG G ++LLAR+A RK KP+G +H+
Sbjct: 578 EILAETKLTPDEFANAVRMEIKDQTK-CAASVGIGSNILLARMATRKAKPDGQYHLK--- 633
Query: 385 TVTECHAFIDHFKLKDLPGIGYSTDLKIKEQFGNVQNISDLRDLLERPSNVSKLIKVIGS 444
E FI + +LPG+G+S + K+ ++ DL+ + ++KL K G
Sbjct: 634 -PEEVDDFIRGQLVTNLPGVGHSMESKLASL--GIKTCGDLQYM-----TMAKLQKEFGP 685
Query: 445 KNTKKLQIYLDGKDDDESISMVKDPHTYFQKKSLSVEINYAIRFKTIDDVDIFLERLALH 504
K + L + G DD + T ++KS+S EINY IRF + + FL L+
Sbjct: 686 KTGQMLYRFCRGLDD-------RPVRTEKERKSVSAEINYGIRFTQPKEAEAFLLSLSEE 738
Query: 505 LWEKLRDSNLMTRQITLKLMKRAQGAPVDPPKFMGMGKCDALSKVSNLGTNTQKFGTIAS 564
+ +L + + +++TLK+M R GAPV+ KF G G CD +++ L T I
Sbjct: 739 IQRRLEATGMKGKRLTLKIMVRKPGAPVETAKFGGHGICDNIARTVTLDQATDNAKIIGK 798
Query: 565 ECKTLFRILSVPPEEVRGIGIQFHRLTDSN 594
+F + + ++RG+GI ++L +N
Sbjct: 799 AMLNMFHTMKLNISDMRGVGIHVNQLVPTN 828
Score = 81.3 bits (199), Expect = 6e-15
Identities = 48/132 (36%), Positives = 72/132 (54%), Gaps = 3/132 (2%)
Query: 40 ELQQLESDVQFRQKYQKEHRVSNPTLFQGCTIYVNGRTNPTRFQLHKLIILHGGTFKHYL 99
++Q+LE QFR + ++ T+F G IYVNG T+P+ +L KL++LHGG + Y
Sbjct: 25 KVQKLEE--QFRSDAAMQKDGTSSTIFSGVAIYVNGYTDPSAEELRKLMMLHGGQYHVYY 82
Query: 100 SGKTAVTHILATELNASKKSSFANFKVVSPEWVTESIARGKLLPWQDFRIVQVSRLQGKI 159
S ++ THI+AT L +K KV+ PEW+ ESI G+LL + +++ K
Sbjct: 83 S-RSKTTHIIATNLPNAKIKELKGEKVIRPEWIVESIKAGRLLSYIPYQLYTKQSSVQKG 141
Query: 160 TDFATVRNCMDP 171
F V DP
Sbjct: 142 LSFNPVCRPEDP 153
>At5g44750 [L] KOG2093 Translesion DNA polymerase - REV1 deoxycytidyl
transferase
Length = 955
Score = 120 bits (300), Expect = 1e-26
Identities = 89/275 (32%), Positives = 128/275 (46%), Gaps = 48/275 (17%)
Query: 170 DPNFINAFFKSSRLHHLSNWKFQLRDNF------VKEFILSYNDTIPDQKYVYFHIDF-- 221
DPNF+ +FK+SRLH + W+ + R F +K N +K HID
Sbjct: 262 DPNFVENYFKNSRLHFIGTWRNRYRKRFHGSSNGLKWADSGQNTAEMAKKSTIIHIDLLF 321
Query: 222 -------DCFFAQVSAKIDGKYDIHATPIAISHGIN---NSDISSCNYVARSFGVYNGMW 271
DCFF VS I + ++H P+A+ H N ++ISS NY AR++GV GM+
Sbjct: 322 ESVKYFQDCFF--VSVVIKNRLELHDKPVAVCHSDNPKGTAEISSANYPARAYGVKAGMF 379
Query: 272 VSSALKLCPDLKILDYEFDEYEAISNLFYSALKDIGIFKMVLPISIDEAIGCMLITPDIT 331
V A LCP L I+ Y F+ YE +S DEA + D+
Sbjct: 380 VRHAKDLCPQLVIVPYNFEAYEE-------------------ALSCDEAFLDVSDLSDVE 420
Query: 332 SELLTQKCMQVRNAVYNVTQGYSVSVGCGPSVLLARLALRKGKPNGFHISWFDTVTECHA 391
+E+L +RN + T G S S G G ++L+ARLA R KP G + + +
Sbjct: 421 TEVLAS---TIRNEILETT-GCSASAGIGGTMLMARLATRVAKPAG---QLYISAEKVEE 473
Query: 392 FIDHFKLKDLPGIGYSTDLKIKEQFGNVQNISDLR 426
F+D + LPG+G K+ +Q N+Q LR
Sbjct: 474 FLDQLPVGTLPGVGSVLKEKLVKQ--NIQTCGQLR 506
>SPCC553.07c [L] KOG2094 Predicted DNA damage inducible protein
Length = 493
Score = 78.6 bits (192), Expect = 4e-14
Identities = 80/324 (24%), Positives = 138/324 (41%), Gaps = 42/324 (12%)
Query: 211 DQKYVYFHIDFDCFFAQVSAKIDGKYDIHATPIAISHGINNSDISSCNYVARSFGVYNGM 270
D + H+D D F+A + + K + + P+A+ + + + NYVAR FGV + M
Sbjct: 127 DLTQIIVHVDCDAFYASIEELKNPK--LKSLPMAVGKSV----LCTANYVARKFGVRSAM 180
Query: 271 WVSSALKLCPDLKILDYEFDEYEAISNLFYSALKDIGIFKMVLPISIDEAIGCMLITPDI 330
A K+CPDL ++ EY S + L + P SIDE M +T +
Sbjct: 181 PEFIARKICPDLVVIPLNLSEYAIKSKEIQNVLAQYD--SNLCPASIDEFY--MNLTSHL 236
Query: 331 -------TSELLTQKCMQVRNAVYNVTQGYSVSVGCGPSVLLARLALRKGKPNGFHISWF 383
T E +T ++R V+ T G +VS G + LLA++A K KPN F
Sbjct: 237 RLQELAFTVENITMVVEKIRKQVHEET-GVTVSCGIAANKLLAKIASNKRKPNNQFFIPF 295
Query: 384 DTVTECHAFIDHFKLKDLPGIGYSTD-----LKIKEQFGNVQNISDLRDLLERPSNVSKL 438
D + F++ ++++ GIG + L+IK G++Q + + P + L
Sbjct: 296 DEI-GISKFMNDLPVREVSGIGRVLEQQLLGLEIK-TCGDIQRNLVILSYIFLPKSFQNL 353
Query: 439 IKVIGSKNTKKLQIYLDGKDDDESISMVKDPHTYFQKKSLSVEINYAIRFKTIDDVDIFL 498
++ T L Y + K +K++ E ++ + ++ L
Sbjct: 354 LRCSYGFGTTILDEYGESK-----------------RKTIGSEATFSSNLSSPSIIEYKL 396
Query: 499 ERLALHLWEKLRDSNLMTRQITLK 522
L ++ E L+ L+T I +K
Sbjct: 397 RLLVQNVSENLQKRGLVTNSIAIK 420
>At1g49980 [L] KOG2094 Predicted DNA damage inducible protein
Length = 795
Score = 61.6 bits (148), Expect = 5e-09
Identities = 54/169 (31%), Positives = 81/169 (46%), Gaps = 12/169 (7%)
Query: 211 DQKYVYFHIDFDCFFAQVSAKIDGKYDIHATPIAISHGINNSDISSCNYVARSFGVYNGM 270
D ++ H+D D F+A V D I P+A+ S IS+ NY AR FGV M
Sbjct: 100 DLSRIWLHVDMDAFYAAVETLSDPS--IKGKPMAVG---GLSMISTANYEARKFGVRAAM 154
Query: 271 WVSSALKLCPDLKILDYEFDEYEAISNLFYSALKDIGIFKMVLPISIDEAIGCMLITPDI 330
A KLCPDL + +F +Y S+L ++ + S+DEA + IT
Sbjct: 155 PGFIARKLCPDLIFVPVDFTKYTHYSDLTRKVFRNYD--PHFIAGSLDEAY--LDITEVC 210
Query: 331 TSELLT--QKCMQVRNAVYNVTQGYSVSVGCGPSVLLARLALRKGKPNG 377
L+ + ++R++VY+ T G + S G + LLA++ KPNG
Sbjct: 211 RERGLSGGEIAEELRSSVYSET-GLTCSAGVAANRLLAKVCSDINKPNG 258
>Hs7705344 [L] KOG2094 Predicted DNA damage inducible protein
Length = 870
Score = 51.2 bits (121), Expect = 6e-06
Identities = 37/103 (35%), Positives = 53/103 (50%), Gaps = 7/103 (6%)
Query: 218 HIDFDCFFAQVSAKIDGKYDIHATPIAISHGINNSDISSCNYVARSFGVYNGMWVSSALK 277
HID D F+A V + + ++ PIA+ + S +S+ NY AR FGV M A +
Sbjct: 105 HIDMDAFYAAVEMRDNP--ELKDKPIAVG---SMSMLSTSNYHARRFGVRAAMPGFIAKR 159
Query: 278 LCPDLKILDYEFDEYEAISNLFYSALKDIGIFKMVLPISIDEA 320
LCP L I+ FD+Y A+S L D + +S+DEA
Sbjct: 160 LCPQLIIVPPNFDKYRAVSKEVKEILADYD--PNFMAMSLDEA 200
Database: KOG eukaryal database 04/03
Posted date: Apr 14, 2003 1:07 PM
Number of letters in database: 30,389,216
Number of sequences in database: 60,738
Lambda K H
0.320 0.137 0.408
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 50,810,709
Number of Sequences: 60738
Number of extensions: 2245588
Number of successful extensions: 5742
Number of sequences better than 1.0e-05: 8
Number of HSP's better than 0.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 5695
Number of HSP's gapped (non-prelim): 18
length of query: 829
length of database: 30,389,216
effective HSP length: 115
effective length of query: 714
effective length of database: 23,404,346
effective search space: 16710703044
effective search space used: 16710703044
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)