ORF STATUS Function Best COG Functional category Pathways and functional systems
r_klactVI6276.1 suspect: Pn PET KOG1052 Amino acid transport and metabolism Glutamate-gated kainate-type ion channel receptor subunit GluR5 and related subunits
r_klactVI6276.1 suspect: Pn PET KOG1052 Inorganic ion transport and metabolism Glutamate-gated kainate-type ion channel receptor subunit GluR5 and related subunits
r_klactVI6276.1 suspect: Pn PET KOG1052 Signal transduction mechanisms Glutamate-gated kainate-type ion channel receptor subunit GluR5 and related subunits
Only best alignment is shown:
BLASTP 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= r_klactVI6276.1 2185183 2185800 206
(206 letters)
Database: KOG eukaryal database 04/03
60,738 sequences; 30,389,216 total letters
Searching..................................................done
Color Key for Alignment Scores: 
Score E
Sequences producing significant alignments: (bits) Value
CE15078 [PET] KOG1052 Glutamate-gated kainate-type ion channel r... 32 0.61
Hs13236549 [S] KOG3098 Uncharacterized conserved protein 30 2.3
CE02751 [G] KOG1879 UDP-glucose:glycoprotein glucosyltransferase 30 3.0
At4g08830 [R] KOG1075 FOG: Reverse transcriptase 29 5.2
Hs20149560 [U] KOG0810 SNARE protein Syntaxin 1 and related prot... 28 6.8
At2g20440 [T] KOG2197 Ypt/Rab-specific GTPase-activating protein... 28 6.8
YJR109c [R] KOG0370 Multifunctional pyrimidine synthesis protein... 28 8.8
Hs18379344 [R] KOG3511 Sortilin and related receptors 28 8.8
Hs11225609_1 [E] KOG3690 Angiotensin I-converting enzymes - M2 f... 28 8.8
>CE15078 [PET] KOG1052 Glutamate-gated kainate-type ion channel receptor
subunit GluR5 and related subunits
Length = 932
Score = 32.0 bits (71), Expect = 0.61
Identities = 21/58 (36%), Positives = 30/58 (51%), Gaps = 4/58 (6%)
Query: 139 LSGSDERGEDHVDTVLDTEFQVRLVLFGQSWQID-IGTWQVDTLVRTNLTGVQRLNLQ 195
LSG R H L + F +R+ L G S ++D IG W+ T V N++G + LQ
Sbjct: 372 LSGDLRRLNGHP---LKSNFSMRIQLLGYSGRLDDIGFWEPATNVHVNMSGDSKAQLQ 426
>Hs13236549 [S] KOG3098 Uncharacterized conserved protein
Length = 449
Score = 30.0 bits (66), Expect = 2.3
Identities = 27/116 (23%), Positives = 48/116 (41%), Gaps = 16/116 (13%)
Query: 85 SWNFNTQITSSNHNTVSDLQDIVKVVDTLLVFXXXXXXXXXXXXXXXFSDSQNILSGSDE 144
+W TQI+ S+ TV ++ +V T+L F DS+N+L G DE
Sbjct: 157 AWQGKTQISESDRRTVFIALTVISLVGTVLFFLIRK------------PDSENVL-GEDE 203
Query: 145 RGED---HVDTVLDTEFQVRLVLFGQSWQIDIGTWQVDTLVRTNLTGVQRLNLQGV 197
+D V+ + F +S+++ + + + T TG++ GV
Sbjct: 204 SSDDQDMEVNESAQNNLTKAVDAFKKSFKLCVTKEMLLLSITTAYTGLELTFFSGV 259
>CE02751 [G] KOG1879 UDP-glucose:glycoprotein glucosyltransferase
Length = 1493
Score = 29.6 bits (65), Expect = 3.0
Identities = 19/60 (31%), Positives = 26/60 (42%), Gaps = 8/60 (13%)
Query: 38 VTNIRDFSSGWSWVVGHGFQ--------HLGSTDNWLTSQVTLSNQLLLHSKHLRSWNFN 89
V + D SSG VVG+ Q H + D L + LS + S HL+ W F+
Sbjct: 835 VKKVLDISSGGRVVVGNALQVGPLESSEHFEAADFKLLESMLLSRGAEVISSHLKKWEFD 894
>At4g08830 [R] KOG1075 FOG: Reverse transcriptase
Length = 947
Score = 28.9 bits (63), Expect = 5.2
Identities = 12/33 (36%), Positives = 20/33 (60%)
Query: 45 SSGWSWVVGHGFQHLGSTDNWLTSQVTLSNQLL 77
S G WVVG+G L +DNWL+ + ++ ++
Sbjct: 575 SRGSRWVVGNGRDILFWSDNWLSHEALINRAVI 607
>Hs20149560 [U] KOG0810 SNARE protein Syntaxin 1 and related proteins
Length = 297
Score = 28.5 bits (62), Expect = 6.8
Identities = 20/82 (24%), Positives = 37/82 (44%), Gaps = 12/82 (14%)
Query: 89 NTQIT-------SSNHNTVSDLQDIVKVVDTLLVFXXXXXXXXXXXXXXXFSDSQNILSG 141
+TQ+T S+ H+ + L+ ++ + + F +NILS
Sbjct: 192 DTQVTRQALNEISARHSEIQQLERSIRELHDIFTFLATEVEMQGEMINRI---EKNILSS 248
Query: 142 SD--ERGEDHVDTVLDTEFQVR 161
+D ERG++HV T L+ + + R
Sbjct: 249 ADYVERGQEHVKTALENQKKAR 270
>At2g20440 [T] KOG2197 Ypt/Rab-specific GTPase-activating protein GYP7 and
related proteins
Length = 371
Score = 28.5 bits (62), Expect = 6.8
Identities = 15/53 (28%), Positives = 24/53 (44%)
Query: 48 WSWVVGHGFQHLGSTDNWLTSQVTLSNQLLLHSKHLRSWNFNTQITSSNHNTV 100
W++ V G Q LG L ++ L +H K L+ +F IT +N +
Sbjct: 298 WNFKVKVGMQILGDIAGNLDAKKACKEALKIHEKFLKKVSFTITITWGRYNMI 350
>YJR109c [R] KOG0370 Multifunctional pyrimidine synthesis protein CAD
(includes carbamoyl-phophate synthetase aspartate
transcarbamylase and glutamine amidotransferase)
Length = 1118
Score = 28.1 bits (61), Expect = 8.8
Identities = 20/80 (25%), Positives = 33/80 (41%)
Query: 24 FTRQHNTVSTIKNGVTNIRDFSSGWSWVVGHGFQHLGSTDNWLTSQVTLSNQLLLHSKHL 83
F Q N + T N N +F+ V+G G +GS+ + V + L K
Sbjct: 556 FPAQTNYLYTTYNATKNDVEFNENGMLVLGSGVYRIGSSVEFDWCAVNTAKTLRDQGKKT 615
Query: 84 RSWNFNTQITSSNHNTVSDL 103
N+N + S++ + V L
Sbjct: 616 IMINYNPETVSTDFDEVDRL 635
>Hs18379344 [R] KOG3511 Sortilin and related receptors
Length = 1009
Score = 28.1 bits (61), Expect = 8.8
Identities = 24/85 (28%), Positives = 35/85 (40%), Gaps = 20/85 (23%)
Query: 50 WVVGHGFQHLGSTDNWLTS------------QVTLSNQLLLHSKHLR--------SWNFN 89
W +GH Q L S DN +T+ Q N +L S+ LR F+
Sbjct: 758 WWIGHSLQPLLSLDNSVTTRFSDTGDVRVTVQAACGNSVLQDSRVLRVLDQFQVMPLQFS 817
Query: 90 TQITSSNHNTVSDLQDIVKVVDTLL 114
++ + N NT +D+ VV LL
Sbjct: 818 KELDAYNPNTPEWREDVGLVVTRLL 842
>Hs11225609_1 [E] KOG3690 Angiotensin I-converting enzymes - M2 family peptidases
Length = 611
Score = 28.1 bits (61), Expect = 8.8
Identities = 11/29 (37%), Positives = 16/29 (54%)
Query: 77 LLHSKHLRSWNFNTQITSSNHNTVSDLQD 105
L + L SWN+NT IT N +++ D
Sbjct: 39 LFYQSSLASWNYNTNITEENVQNMNNAGD 67
Database: KOG eukaryal database 04/03
Posted date: Apr 14, 2003 1:07 PM
Number of letters in database: 30,389,216
Number of sequences in database: 60,738
Lambda K H
0.319 0.133 0.403
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 11,007,244
Number of Sequences: 60738
Number of extensions: 399955
Number of successful extensions: 811
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 807
Number of HSP's gapped (non-prelim): 9
length of query: 206
length of database: 30,389,216
effective HSP length: 101
effective length of query: 105
effective length of database: 24,254,678
effective search space: 2546741190
effective search space used: 2546741190
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)