ORF STATUS Function Best COG Functional category Pathways and functional systems
r_klactVI6336.1 suspect: LH T KOG1023 Signal transduction mechanisms Natriuretic peptide receptor, guanylate cyclase
Only best alignment is shown:
BLASTP 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= r_klactVI6336.1 2207577 2207762 62
(62 letters)
Database: KOG eukaryal database 04/03
60,738 sequences; 30,389,216 total letters
Searching..................................................done
Color Key for Alignment Scores:
Score E
Sequences producing significant alignments: (bits) Value
CE02405 [T] KOG1023 Natriuretic peptide receptor guanylate cyclase 27 5.2
At2g21280 [F] KOG3019 Predicted nucleoside-diphosphate sugar epi... 26 8.9
>CE02405 [T] KOG1023 Natriuretic peptide receptor guanylate cyclase
Length = 1143
Score = 26.9 bits (58), Expect = 5.2
Identities = 16/31 (51%), Positives = 17/31 (54%), Gaps = 6/31 (19%)
Query: 5 NKFPGLLIRS------WKNCSTGSLKTISSK 29
NKF GL I WK CS GSL+ I SK
Sbjct: 623 NKFIGLSIDGSRFVSVWKMCSRGSLQDIISK 653
>At2g21280 [F] KOG3019 Predicted nucleoside-diphosphate sugar epimerase
Length = 318
Score = 26.2 bits (56), Expect = 8.9
Identities = 11/30 (36%), Positives = 16/30 (52%), Gaps = 3/30 (10%)
Query: 1 MFEGNKFPGLLIRS---WKNCSTGSLKTIS 27
+F FPG++I WKNC GS ++
Sbjct: 63 IFPAKDFPGIVIAEESEWKNCVQGSTAVVN 92
Database: KOG eukaryal database 04/03
Posted date: Apr 14, 2003 1:07 PM
Number of letters in database: 30,389,216
Number of sequences in database: 60,738
Lambda K H
0.321 0.135 0.453
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 2,652,298
Number of Sequences: 60738
Number of extensions: 42301
Number of successful extensions: 63
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 0
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 63
Number of HSP's gapped (non-prelim): 2
length of query: 62
length of database: 30,389,216
effective HSP length: 38
effective length of query: 24
effective length of database: 28,081,172
effective search space: 673948128
effective search space used: 673948128
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)