ORF      STATUS       Function Best COG  Functional category                                          Pathways and functional systems
r_klactVI6341.1   suspect: Pn  T     KOG1217   Signal transduction mechanisms                                 Fibrillins and related proteins containing Ca2+-binding EGF-like domains

BLASTP 2.2.3 [May-13-2002]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= r_klactVI6341.1 2209261 2208971 -97  
         (97 letters)

Database: KOG eukaryal database 04/03 
           60,738 sequences; 30,389,216 total letters

Searching..................................................done

Color Key for Alignment Scores:   


                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Hs4758818 [T] KOG1217 Fibrillins and related proteins containing...    27   4.8  
YGL003c [DO] KOG0305 Anaphase promoting complex Cdc20 Cdh1 and A...    27   6.3  
Hs22058616 [T] KOG1217 Fibrillins and related proteins containin...    26   8.2  

>Hs4758818 [T] KOG1217 Fibrillins and related proteins containing Ca2+-binding
           EGF-like domains
          Length = 2003

 Score = 26.9 bits (58), Expect = 4.8
 Identities = 11/28 (39%), Positives = 15/28 (53%), Gaps = 1/28 (3%)

Query: 15  SQCISSPALKNSV-LPFIVNFHCLCSKG 41
           ++C+S P    S  L  +  FHCLC  G
Sbjct: 477 NECLSQPCHPGSTCLDLLATFHCLCPPG 504


>YGL003c [DO] KOG0305 Anaphase promoting complex Cdc20 Cdh1 and Ama1
           subunits
          Length = 566

 Score = 26.6 bits (57), Expect = 6.3
 Identities = 13/26 (50%), Positives = 18/26 (69%)

Query: 69  LITVPSSSRDSLTLWNFNSVIPNAIL 94
           L+T    S+ +LTLW+ NS+ P AIL
Sbjct: 486 LVTSHGYSKYNLTLWDCNSMDPIAIL 511


>Hs22058616 [T] KOG1217 Fibrillins and related proteins containing Ca2+-binding
           EGF-like domains
          Length = 706

 Score = 26.2 bits (56), Expect = 8.2
 Identities = 10/27 (37%), Positives = 14/27 (51%)

Query: 15  SQCISSPALKNSVLPFIVNFHCLCSKG 41
           ++C SSP L       +  F CLC+ G
Sbjct: 156 NECSSSPCLHGYCYDMVDGFSCLCNPG 182


  Database: KOG eukaryal database 04/03
    Posted date:  Apr 14, 2003  1:07 PM
  Number of letters in database: 30,389,216
  Number of sequences in database:  60,738
  
Lambda     K      H
   0.315    0.129    0.379 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,128,030
Number of Sequences: 60738
Number of extensions: 141151
Number of successful extensions: 241
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 237
Number of HSP's gapped (non-prelim): 5
length of query: 97
length of database: 30,389,216
effective HSP length: 73
effective length of query: 24
effective length of database: 25,955,342
effective search space: 622928208
effective search space used: 622928208
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)