ORF      STATUS       Function Best COG  Functional category                                          Pathways and functional systems
r_klactVI6507   suspect: LH   S     KOG4401  Function unknown                                               Uncharacterized conserved protein

BLASTP 2.2.3 [May-13-2002]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= r_klactVI6507 2265002  2265556 185  
         (185 letters)

Database: KOG eukaryal database 04/03 
           60,738 sequences; 30,389,216 total letters

Searching..................................................done

Color Key for Alignment Scores:   


                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

YHR121w [S] KOG4401 Uncharacterized conserved protein                 182   2e-46
Hs20559069 [S] KOG4401 Uncharacterized conserved protein               65   4e-11

>YHR121w [S] KOG4401 Uncharacterized conserved protein
          Length = 187

 Score =  182 bits (462), Expect = 2e-46
 Identities = 91/188 (48%), Positives = 139/188 (73%), Gaps = 4/188 (2%)

Query: 1   MSISLENILGLKVKITDVLDHVTQGKVYSFNSNNDTITLIVGKKNKA-YTFEIIQTSFIK 59
           MS+SLE  LG ++K+T+VLD VT+G++YSFNS+N+T+T+   KKN++   F++I+ +FIK
Sbjct: 1   MSVSLEQTLGFRIKVTNVLDVVTEGRLYSFNSSNNTLTIQTTKKNQSPQNFKVIKCTFIK 60

Query: 60  HLELVGEKANPSSFKKDHVKPSYVDLDRVKNALAKTIDTAAKKEMSIGKNVSYEGQFIFD 119
           HLE++G+K + +SFKK  +KPSYV+++RV+  L +++  + KKE+  GK VS EGQFIFD
Sbjct: 61  HLEVIGDKPSFNSFKKQQIKPSYVNVERVEKLLKESVIASKKKELLRGKGVSAEGQFIFD 120

Query: 120 LIHKTISDIVWKGKSIVVLDELEINPPYQLGSIKPLQGRTDVKSKELIDKIVESAWNKLE 179
            I KTI D  W  K I++LD++++ PPY++  IK L   ++ +S  LI +IVE +W +LE
Sbjct: 121 QIFKTIGDTKWVAKDIIILDDVKVQPPYKVEDIKVLHEGSN-QSITLIQRIVERSWEQLE 179

Query: 180 NE--RKGG 185
            +  RKGG
Sbjct: 180 QDDGRKGG 187


>Hs20559069 [S] KOG4401 Uncharacterized conserved protein
          Length = 195

 Score = 65.5 bits (158), Expect = 4e-11
 Identities = 51/182 (28%), Positives = 88/182 (48%), Gaps = 23/182 (12%)

Query: 9   LGLKVKITDVLDHVTQGKVYSFNSNNDTITLIV----GKKNKAYTFEIIQTSFIKHLELV 64
           +G +V      +   QG+V +F+  +  + L      GK N A    +I   ++  +E++
Sbjct: 11  VGSQVSCRTCQEQRLQGEVVAFDYQSKMLALKCPSSSGKPNHADIL-LINLQYVSEVEII 69

Query: 65  GEKANPSSFKKDHVKPSYVDLDRVKNALAKTIDTAAKKEMS----IGKNVSYEGQFIFDL 120
            ++            P    L+  K  LA    T  ++++S    I   VS EGQ +F  
Sbjct: 70  NDRTE--------TPPPLASLNVSK--LASKARTEKEEKLSQAYAISAGVSLEGQQLFQT 119

Query: 121 IHKTISDIVWKGKSIVVLDELEINPPYQLGSIKPLQGRTDVKSKELIDKIVESAWNKLEN 180
           IHKTI D  W+ K+IVV++E+ I PPYQ+ + K  +G     +   + KIVE  +  +E+
Sbjct: 120 IHKTIKDCKWQEKNIVVMEEVVITPPYQVENCKGKEG----SALSHVRKIVEKHFRDVES 175

Query: 181 ER 182
           ++
Sbjct: 176 QK 177


  Database: KOG eukaryal database 04/03
    Posted date:  Apr 14, 2003  1:07 PM
  Number of letters in database: 30,389,216
  Number of sequences in database:  60,738
  
Lambda     K      H
   0.314    0.134    0.368 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,927,048
Number of Sequences: 60738
Number of extensions: 445129
Number of successful extensions: 901
Number of sequences better than 1.0e-05: 2
Number of HSP's better than  0.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 897
Number of HSP's gapped (non-prelim): 2
length of query: 185
length of database: 30,389,216
effective HSP length: 100
effective length of query: 85
effective length of database: 24,315,416
effective search space: 2066810360
effective search space used: 2066810360
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)