ORF      STATUS       Function Best COG  Functional category                                          Pathways and functional systems
r_klactVI6524   suspect: LH   U     KOG4111  Intracellular trafficking, secretion, and vesicular transport  Translocase of outer mitochondrial membrane complex, subunit TOM22

BLASTP 2.2.3 [May-13-2002]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= r_klactVI6524 2271371 2270910 -154 
         (154 letters)

Database: KOG eukaryal database 04/03 
           60,738 sequences; 30,389,216 total letters

Searching..................................................done

Color Key for Alignment Scores:   


                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

YNL131w [U] KOG4111 Translocase of outer mitochondrial membrane ...    87   9e-18

>YNL131w [U] KOG4111 Translocase of outer mitochondrial membrane complex
           subunit TOM22
          Length = 152

 Score = 87.0 bits (214), Expect = 9e-18
 Identities = 43/83 (51%), Positives = 55/83 (65%)

Query: 54  IYERLIALKDIIPPQKRKTISFLYNGTVSLFSSVFSKSGNLLWAVTTXXXXXXXXXXXXX 113
           + +R++ALKDI+PP KR+TIS  +  T S   + F+KSGNL W +TT             
Sbjct: 58  LLDRIVALKDIVPPGKRQTISNFFGFTSSFVRNAFTKSGNLAWTLTTTALLLGVPLSLSI 117

Query: 114 XAEQQLIEMEKSFDLQKDANDIL 136
            AEQQLIEMEK+FDLQ DAN+IL
Sbjct: 118 LAEQQLIEMEKTFDLQSDANNIL 140


  Database: KOG eukaryal database 04/03
    Posted date:  Apr 14, 2003  1:07 PM
  Number of letters in database: 30,389,216
  Number of sequences in database:  60,738
  
Lambda     K      H
   0.313    0.130    0.344 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,496,983
Number of Sequences: 60738
Number of extensions: 131036
Number of successful extensions: 189
Number of sequences better than 1.0e-05: 1
Number of HSP's better than  0.0 without gapping: 1
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 188
Number of HSP's gapped (non-prelim): 1
length of query: 154
length of database: 30,389,216
effective HSP length: 97
effective length of query: 57
effective length of database: 24,497,630
effective search space: 1396364910
effective search space used: 1396364910
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)