ORF STATUS Function Best COG Functional category Pathways and functional systems
r_klactVI6641 check: MH K KOG0385 Transcription Chromatin remodeling complex WSTF-ISWI, small subunit
Only best alignment is shown:
BLASTP 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= r_klactVI6641 2313030 2309845 -1062
(1062 letters)
Database: KOG eukaryal database 04/03
60,738 sequences; 30,389,216 total letters
Searching..................................................done
Color Key for Alignment Scores: 
Score E
Sequences producing significant alignments: (bits) Value
YOR304w [K] KOG0385 Chromatin remodeling complex WSTF-ISWI small... 1394 0.0
YBR245c [K] KOG0385 Chromatin remodeling complex WSTF-ISWI small... 984 0.0
Hs21071058 [K] KOG0385 Chromatin remodeling complex WSTF-ISWI sm... 898 0.0
Hs21071044 [K] KOG0385 Chromatin remodeling complex WSTF-ISWI sm... 872 0.0
7303422 [K] KOG0385 Chromatin remodeling complex WSTF-ISWI small... 867 0.0
CE00789 [K] KOG0385 Chromatin remodeling complex WSTF-ISWI small... 836 0.0
Hs21071046 [K] KOG0385 Chromatin remodeling complex WSTF-ISWI sm... 832 0.0
At3g06400 [K] KOG0385 Chromatin remodeling complex WSTF-ISWI sma... 810 0.0
At5g18620 [K] KOG0385 Chromatin remodeling complex WSTF-ISWI sma... 800 0.0
ECU10g1320 [K] KOG0385 Chromatin remodeling complex WSTF-ISWI sm... 600 e-171
SPAC1783.05 [K] KOG0384 Chromodomain-helicase DNA-binding protein 462 e-130
Hs4557449 [K] KOG0384 Chromodomain-helicase DNA-binding protein 456 e-128
At2g13370 [K] KOG0384 Chromodomain-helicase DNA-binding protein 454 e-127
At5g19310 [BK] KOG0386 Chromatin remodeling complex SWI/SNF comp... 453 e-127
At3g06010 [BK] KOG0386 Chromatin remodeling complex SWI/SNF comp... 452 e-126
Hs4557447 [K] KOG0384 Chromodomain-helicase DNA-binding protein 450 e-126
SPAC3G6.01 [K] KOG0384 Chromodomain-helicase DNA-binding protein 448 e-125
YOR290c [BK] KOG0386 Chromatin remodeling complex SWI/SNF compon... 444 e-124
YER164w [K] KOG0384 Chromodomain-helicase DNA-binding protein 443 e-124
SPAC1250.01 [BK] KOG0386 Chromatin remodeling complex SWI/SNF co... 442 e-123
CE05553 [BK] KOG0386 Chromatin remodeling complex SWI/SNF compon... 441 e-123
7295870 [K] KOG0384 Chromodomain-helicase DNA-binding protein 440 e-123
YIL126w [BK] KOG0386 Chromatin remodeling complex SWI/SNF compon... 440 e-123
CE11572 [K] KOG0384 Chromodomain-helicase DNA-binding protein 431 e-120
Hs21071056 [BK] KOG0386 Chromatin remodeling complex SWI/SNF com... 429 e-119
CE27114 [BK] KOG0386 Chromatin remodeling complex SWI/SNF compon... 427 e-119
Hs21071050 [BK] KOG0386 Chromatin remodeling complex SWI/SNF com... 426 e-118
Hs21071048 [BK] KOG0386 Chromatin remodeling complex SWI/SNF com... 426 e-118
7294205 [BK] KOG0386 Chromatin remodeling complex SWI/SNF compon... 426 e-118
Hs20533808 [R] KOG0383 Predicted helicase 425 e-118
At5g66750 [K] KOG0385 Chromatin remodeling complex WSTF-ISWI sma... 424 e-118
CE17716 [R] KOG0383 Predicted helicase 421 e-117
CE03657 [R] KOG0383 Predicted helicase 419 e-117
Hs4557451 [R] KOG0383 Predicted helicase 418 e-116
Hs4557453 [R] KOG0383 Predicted helicase 417 e-116
Hs21914927 [K] KOG0385 Chromatin remodeling complex WSTF-ISWI sm... 414 e-115
7293795 [R] KOG0383 Predicted helicase 412 e-114
Hs22047300 [K] KOG0384 Chromodomain-helicase DNA-binding protein 410 e-114
At2g28290 [BK] KOG0386 Chromatin remodeling complex SWI/SNF comp... 410 e-114
Hs21362042 [K] KOG0384 Chromodomain-helicase DNA-binding protein 409 e-113
Hs22047966 [K] KOG0384 Chromodomain-helicase DNA-binding protein 406 e-112
CE18196 [K] KOG0384 Chromodomain-helicase DNA-binding protein 399 e-110
At2g25170 [R] KOG0383 Predicted helicase 395 e-109
Hs20536191 [K] KOG0385 Chromatin remodeling complex WSTF-ISWI sm... 394 e-109
ECU01g0350 [K] KOG0384 Chromodomain-helicase DNA-binding protein 377 e-104
YFR038w [K] KOG0385 Chromatin remodeling complex WSTF-ISWI small... 369 e-101
At2g44980 [K] KOG0385 Chromatin remodeling complex WSTF-ISWI sma... 369 e-101
At5g44800 [R] KOG0383 Predicted helicase 363 e-100
At2g46020 [BK] KOG0386 Chromatin remodeling complex SWI/SNF comp... 361 3e-99
SPBP35G2.10 [R] KOG0383 Predicted helicase 340 5e-93
Hs14149730 [B] KOG0389 SNF2 family DNA-dependent ATPase 320 1e-86
Hs4557565 [KL] KOG0387 Transcription-coupled repair protein CSB/... 312 2e-84
7297570 [B] KOG0389 SNF2 family DNA-dependent ATPase 308 3e-83
At2g18760 [KL] KOG0387 Transcription-coupled repair protein CSB/... 290 8e-78
YPL082c [K] KOG0392 SNF2 family DNA-dependent ATPase domain-cont... 288 3e-77
At2g02090 [B] KOG0389 SNF2 family DNA-dependent ATPase 282 2e-75
SPCC1235.05c [B] KOG0389 SNF2 family DNA-dependent ATPase 280 7e-75
ECU09g0410 [KL] KOG0387 Transcription-coupled repair protein CSB... 275 3e-73
YAL019w [B] KOG0389 SNF2 family DNA-dependent ATPase 274 5e-73
SPAC20G8.08c [B] KOG0389 SNF2 family DNA-dependent ATPase 273 8e-73
YJR035w [KL] KOG0387 Transcription-coupled repair protein CSB/RA... 273 1e-72
SPAC25A8.01c [B] KOG0389 SNF2 family DNA-dependent ATPase 268 3e-71
CE16277 [B] KOG0389 SNF2 family DNA-dependent ATPase 262 2e-69
SPBC1826.01c [K] KOG0392 SNF2 family DNA-dependent ATPase domain... 262 2e-69
SPCP25A2.02c [KL] KOG0387 Transcription-coupled repair protein C... 261 5e-69
At3g54280 [K] KOG0392 SNF2 family DNA-dependent ATPase domain-co... 253 1e-66
7300091 [K] KOG0392 SNF2 family DNA-dependent ATPase domain-cont... 248 5e-65
At3g12810 [R] KOG0391 SNF2 family DNA-dependent ATPase 246 1e-64
Hs6912622_2 [L] KOG0390 DNA repair protein SNF2 family 244 7e-64
At1g03750 [KL] KOG0387 Transcription-coupled repair protein CSB/... 242 3e-63
CE25717 [R] KOG0391 SNF2 family DNA-dependent ATPase 240 1e-62
Hs17454125 [K] KOG0392 SNF2 family DNA-dependent ATPase domain-c... 239 2e-62
ECU03g1530 [K] KOG0392 SNF2 family DNA-dependent ATPase domain-c... 239 2e-62
Hs13376715 [K] KOG0384 Chromodomain-helicase DNA-binding protein 238 3e-62
ECU09g1890 [L] KOG0388 SNF2 family DNA-dependent ATPase 238 5e-62
Hs5730067 [R] KOG0391 SNF2 family DNA-dependent ATPase 237 8e-62
SPAC15A10.03c [L] KOG0390 DNA repair protein SNF2 family 236 1e-61
YGL150c [L] KOG0388 SNF2 family DNA-dependent ATPase 236 1e-61
YDR334w [R] KOG0391 SNF2 family DNA-dependent ATPase 235 2e-61
At3g19210 [L] KOG0390 DNA repair protein SNF2 family 233 9e-61
7295868 [L] KOG0390 DNA repair protein SNF2 family 231 5e-60
At3g57300 [L] KOG0388 SNF2 family DNA-dependent ATPase 230 8e-60
CE25143 [L] KOG0390 DNA repair protein SNF2 family 225 3e-58
YGL163c [L] KOG0390 DNA repair protein SNF2 family 224 6e-58
YBR073w [L] KOG0390 DNA repair protein SNF2 family 224 6e-58
Hs14767157 [K] KOG0385 Chromatin remodeling complex WSTF-ISWI sm... 224 6e-58
Hs4506397 [L] KOG0390 DNA repair protein SNF2 family 222 2e-57
HsM8922362 [K] KOG0385 Chromatin remodeling complex WSTF-ISWI sm... 217 7e-56
At4g31900 [R] KOG0383 Predicted helicase 215 3e-55
CE15856 [K] KOG0392 SNF2 family DNA-dependent ATPase domain-cont... 211 4e-54
CE11028 [KL] KOG0387 Transcription-coupled repair protein CSB/RA... 203 1e-51
7300511 [L] KOG0388 SNF2 family DNA-dependent ATPase 200 1e-50
SPAC22F3.03c [L] KOG0390 DNA repair protein SNF2 family 198 4e-50
At5g63950 [KL] KOG0387 Transcription-coupled repair protein CSB/... 197 7e-50
HsM14149926 [K] KOG0384 Chromodomain-helicase DNA-binding protein 183 1e-45
At1g08600 [K] KOG1015 Transcription regulator XNP/ATRX DEAD-box ... 182 3e-45
SPAC3G6.12 [L] KOG0388 SNF2 family DNA-dependent ATPase 179 2e-44
CE23323 [L] KOG0390 DNA repair protein SNF2 family 179 3e-44
Hs15805014 [R] KOG0391 SNF2 family DNA-dependent ATPase 167 8e-41
7298963 [KL] KOG4439 RNA polymerase II transcription termination... 162 3e-39
7296236 [K] KOG0384 Chromodomain-helicase DNA-binding protein 159 2e-38
Hs19923174 [KL] KOG4439 RNA polymerase II transcription terminat... 153 2e-36
CE11083 [KL] KOG4439 RNA polymerase II transcription termination... 152 2e-36
At1g02670 [L] KOG1002 Nucleotide excision repair protein RAD16 139 2e-32
7296909 [B] KOG1000 Chromatin remodeling protein HARP/SMARCAL1 D... 124 6e-28
ECU06g0820 [B] KOG1000 Chromatin remodeling protein HARP/SMARCAL... 124 1e-27
Hs20336209 [K] KOG1015 Transcription regulator XNP/ATRX DEAD-box... 123 1e-27
Hs20336207 [K] KOG1015 Transcription regulator XNP/ATRX DEAD-box... 123 1e-27
Hs20336205 [K] KOG1015 Transcription regulator XNP/ATRX DEAD-box... 123 1e-27
Hs4757978 [K] KOG0385 Chromatin remodeling complex WSTF-ISWI sma... 122 2e-27
SPCC1620.14c [BK] KOG0386 Chromatin remodeling complex SWI/SNF c... 120 1e-26
7301343 [K] KOG1015 Transcription regulator XNP/ATRX DEAD-box su... 115 3e-25
Hs20538502 [R] KOG1016 Predicted DNA helicase DEAD-box superfamily 114 6e-25
SPBC582.10c [KL] KOG1001 Helicase-like transcription factor HLTF... 114 1e-24
7293730 [R] KOG0383 Predicted helicase 113 2e-24
Hs21071060 [B] KOG1000 Chromatin remodeling protein HARP/SMARCAL... 112 2e-24
At5g43530 [KL] KOG1001 Helicase-like transcription factor HLTF/D... 110 9e-24
At2g21450 [L] KOG0390 DNA repair protein SNF2 family 110 1e-23
At3g42670 [L] KOG0390 DNA repair protein SNF2 family 108 3e-23
CE27689 [B] KOG1000 Chromatin remodeling protein HARP/SMARCAL1 D... 108 4e-23
CE27688 [B] KOG1000 Chromatin remodeling protein HARP/SMARCAL1 D... 108 4e-23
At3g24340 [L] KOG0390 DNA repair protein SNF2 family 108 6e-23
At1g05480 [L] KOG0390 DNA repair protein SNF2 family 107 1e-22
CE17477 [R] KOG1016 Predicted DNA helicase DEAD-box superfamily 106 2e-22
Hs17437081 [B] KOG0389 SNF2 family DNA-dependent ATPase 104 8e-22
SPBC23E6.02 [KL] KOG1001 Helicase-like transcription factor HLTF... 102 2e-21
CE17314 [K] KOG1015 Transcription regulator XNP/ATRX DEAD-box su... 102 3e-21
At5g20420 [L] KOG0390 DNA repair protein SNF2 family 101 7e-21
CE14110 [KL] KOG4439 RNA polymerase II transcription termination... 100 9e-21
At5g05130 [KL] KOG1001 Helicase-like transcription factor HLTF/D... 100 2e-20
SPAC17A2.12 [KL] KOG1001 Helicase-like transcription factor HLTF... 98 8e-20
At5g22750 [KL] KOG1001 Helicase-like transcription factor HLTF/D... 97 1e-19
Hs21071052 [KL] KOG1001 Helicase-like transcription factor HLTF/... 95 7e-19
At2g16390 [L] KOG0390 DNA repair protein SNF2 family 94 9e-19
7291744 [R] KOG1016 Predicted DNA helicase DEAD-box superfamily 94 1e-18
At3g20010 [KL] KOG1001 Helicase-like transcription factor HLTF/D... 92 4e-18
YBR114w [L] KOG1002 Nucleotide excision repair protein RAD16 90 2e-17
SPCC330.01c [L] KOG1002 Nucleotide excision repair protein RAD16 90 2e-17
At1g61140 [KL] KOG1001 Helicase-like transcription factor HLTF/D... 89 5e-17
At1g50410 [KL] KOG1001 Helicase-like transcription factor HLTF/D... 89 5e-17
7298962 [KL] KOG4439 RNA polymerase II transcription termination... 89 5e-17
At1g11100 [KL] KOG1001 Helicase-like transcription factor HLTF/D... 88 6e-17
At1g48310 [B] KOG1000 Chromatin remodeling protein HARP/SMARCAL1... 88 8e-17
CE11450 [KL] KOG4439 RNA polymerase II transcription termination... 87 1e-16
At3g16600 [KL] KOG1001 Helicase-like transcription factor HLTF/D... 86 4e-16
At1g05120 [L] KOG1002 Nucleotide excision repair protein RAD16 86 4e-16
YLR032w [KL] KOG1001 Helicase-like transcription factor HLTF/DNA... 85 5e-16
YOR191w [KL] KOG1001 Helicase-like transcription factor HLTF/DNA... 83 2e-15
Hs22048060 [K] KOG0384 Chromodomain-helicase DNA-binding protein 76 2e-13
At2g40770 [L] KOG0298 DEAD box-containing helicase-like transcri... 72 6e-12
CE23294 [KL] KOG4439 RNA polymerase II transcription termination... 69 4e-11
At5g07810 [B] KOG1000 Chromatin remodeling protein HARP/SMARCAL1... 67 1e-10
SPAC144.05 [L] KOG0298 DEAD box-containing helicase-like transcr... 65 6e-10
SPAC13G6.01c [KL] KOG1001 Helicase-like transcription factor HLT... 64 1e-09
Hs20532976 [B] KOG1000 Chromatin remodeling protein HARP/SMARCAL... 62 5e-09
Hs17441908 [B] KOG1000 Chromatin remodeling protein HARP/SMARCAL... 62 6e-09
7295362 [L] KOG0298 DEAD box-containing helicase-like transcript... 60 1e-08
YLR247c [L] KOG0298 DEAD box-containing helicase-like transcript... 59 5e-08
Hs22054523 [L] KOG0298 DEAD box-containing helicase-like transcr... 56 3e-07
SPAC11E3.01c [R] KOG0391 SNF2 family DNA-dependent ATPase 53 3e-06
>YOR304w [K] KOG0385 Chromatin remodeling complex WSTF-ISWI small subunit
Length = 1120
Score = 1394 bits (3608), Expect = 0.0
Identities = 693/1056 (65%), Positives = 832/1056 (78%), Gaps = 14/1056 (1%)
Query: 13 KYWSERRSKFLLDVDPKIAKQRNKEDTYIRFKHLLQITDLFRHFIGIRAKYDKNMQKLLK 72
+YW++R+ KF+LDVDPK AKQ++K DTY RFK+LL +TDLFRHFIGI+AK+DKN+QKLLK
Sbjct: 61 EYWAQRKKKFVLDVDPKYAKQKDKSDTYKRFKYLLGVTDLFRHFIGIKAKHDKNIQKLLK 120
Query: 73 TIDAENKVAGTLKEPAGHLARAPRHYRKXXXXXXXXXXXXXXXXXXXXXXXX---XQSPS 129
+D++ A L + ++ + RH+RK +SPS
Sbjct: 121 QLDSD---ANKLSKSHSTVSSSSRHHRKTEKEEDAELMADEEEEIVDTYQEDIFVSESPS 177
Query: 130 FIKEGKLRDYQVYGLNWLISLHESKLSGILADEMGLGKTLQSISFLGYLRYIKGIEGPYI 189
F+K GKLRDYQV GLNWLISLHE+KLSGILADEMGLGKTLQ+ISFLGYLRY+K IEGP++
Sbjct: 178 FVKSGKLRDYQVQGLNWLISLHENKLSGILADEMGLGKTLQTISFLGYLRYVKQIEGPFL 237
Query: 190 VIVPKSTLDNWQREFAKWTPEVKTVILQGDKDFRKELIETKILTCNFDVLITSYEMVLKE 249
+IVPKSTLDNW+REF KWTP V ++L GDKD R +++ IL FDVLITSYEMV++E
Sbjct: 238 IIVPKSTLDNWRREFLKWTPNVNVLVLHGDKDTRADIVRNIILEARFDVLITSYEMVIRE 297
Query: 250 KLTLKRFAWEYILIDEAHRIKNEQSALSQVIRLFYSKNRLLITGTPLQNNLHELWALLNF 309
K LKR AW+YI+IDEAHRIKNEQSALSQ+IRLFYSKNRLLITGTPLQNNLHELWALLNF
Sbjct: 298 KNALKRLAWQYIVIDEAHRIKNEQSALSQIIRLFYSKNRLLITGTPLQNNLHELWALLNF 357
Query: 310 LLPDVFGDSEVFDEWFQQNGKEEDQEVVVQQLHSVLQPFLLRRVKSEVEKSLLPKKEINL 369
LLPD+FGDSE+FDEWF+QN E+DQE+V+QQLHSVL PFLLRRVK++VEKSLLPK E N+
Sbjct: 358 LLPDIFGDSELFDEWFEQNNSEQDQEIVIQQLHSVLNPFLLRRVKADVEKSLLPKIETNV 417
Query: 370 YVGMTDMQIEWYKSLLEKDIDAVNGAVGKREGKTRLLNIVMQLRKCCNHPYLFEGAEPGP 429
YVGMTDMQI+WYKSLLEKDIDAVNGAVGKREGKTRLLNIVMQLRKCCNHPYLFEGAEPGP
Sbjct: 418 YVGMTDMQIQWYKSLLEKDIDAVNGAVGKREGKTRLLNIVMQLRKCCNHPYLFEGAEPGP 477
Query: 430 PYTTDEHLVFNSGKMIVLDKLLKKKKEQGSRVLIFSQMSRLLDILEDYCYFRGYEYCRID 489
PYTTDEHL+FNSGKMI+LDKLLK+ KE+GSRVLIFSQMSRLLDILEDYCYFR +EYCRID
Sbjct: 478 PYTTDEHLIFNSGKMIILDKLLKRLKEKGSRVLIFSQMSRLLDILEDYCYFRDFEYCRID 537
Query: 490 GSTSHDERVEAIDEYNKPNSEKFIFLLTTRAGGLGINLVTADTVVLYDSDWNPQADLQAM 549
GSTSH+ER+EAIDEYNKPNSEKF+FLLTTRAGGLGINLVTADTV+L+DSDWNPQADLQAM
Sbjct: 538 GSTSHEERIEAIDEYNKPNSEKFVFLLTTRAGGLGINLVTADTVILFDSDWNPQADLQAM 597
Query: 550 DRAHRIGQKKQVFVYRFVTENAIEEKVIERAAQKLRLDQLVIQQGTGKKTSALTNNKDDL 609
DRAHRIGQKKQV VYRFVTENAIEEKVIERAAQKLRLDQLVIQQGTGKKT++L N+KDDL
Sbjct: 598 DRAHRIGQKKQVHVYRFVTENAIEEKVIERAAQKLRLDQLVIQQGTGKKTASLGNSKDDL 657
Query: 610 IDMIQFGARDMLQHGSGNITVDEDIDEILKKGERKTLELNAKYESLGLDDLQKFNGMADQ 669
+DMIQFGA++M + + +TVD DID+ILKKGE+KT ELNAKY+SLGLDDLQKFNG+ +Q
Sbjct: 658 LDMIQFGAKNMFEKKASKVTVDADIDDILKKGEQKTQELNAKYQSLGLDDLQKFNGIENQ 717
Query: 670 SAYEWNGTNFEKKKPDDHTVDWINPPKRERRREQPLYSVDDYYREVIGNGKSKPSGSNTP 729
SAYEWNG +F+KK +D V+WINP +RERRREQ YSVDDYY+E+IG G SK + TP
Sbjct: 718 SAYEWNGKSFQKKS-NDKVVEWINPSRRERRREQTTYSVDDYYKEIIGGG-SKSASKQTP 775
Query: 730 ALKLPKQPKVIRMTYYQFAHPEFVRLQELEQLWYKKSVGYKITAYDVKEHAXXXXXXXXX 789
K P+ PKVI +QF E LQE EQL++KK V YK+T+YD+
Sbjct: 776 QPKAPRAPKVIHGQDFQFFPKELDALQEKEQLYFKKKVNYKVTSYDI---TGDIRNEGSD 832
Query: 790 XXXXXXXXXXXXTNNAQKQEDDIDAKIAEEQAKIDAAEEFTDENLEQKQRFLEESFYNWN 849
K +++ +I EEQ KI++A +FT E+ +KQ + ++F NWN
Sbjct: 833 AEEEEGEYKNAANTEGHKGHEELKRRIEEEQEKINSAPDFTQEDELRKQELISKAFTNWN 892
Query: 850 KREFLAFISACIKFGRDNYVSISKAIHTKTPEEVQRYSETFWKRYKEVQGWEKYVANIEA 909
KR+F+AFI+AC K+GRD+ +I K+I +KTPEEV+ Y++ FW+R KE+ GWEKY+ N+E
Sbjct: 893 KRDFMAFINACAKYGRDDMENIKKSIDSKTPEEVEVYAKIFWERLKEINGWEKYLHNVEL 952
Query: 910 GEKKTEKLKIQETIXXXXXXXXXXPLVELKILYPPNNTRRTYNSLEDIFLLVTVGNLGLF 969
GEKK EKLK QET+ PL EL I YPPNN RRTYN+LED FLL+ V GL
Sbjct: 953 GEKKNEKLKFQETLLRQKIEQCKHPLHELIIQYPPNNARRTYNTLEDKFLLLAVNKYGLR 1012
Query: 970 ASNLYERVKQEILKSPLFIFSWFIKTRTPLDISKRIATLLTLVQREHEGVEHKRKRKTVT 1029
A LYE++KQEI+ S LF F WFIKTRT ++SKR+ TLLTL+ RE+E + +K+++ T
Sbjct: 1013 ADKLYEKLKQEIMMSDLFTFDWFIKTRTVHELSKRVHTLLTLIVREYEQPDANKKKRSRT 1072
Query: 1030 SA--DDQP-NDSHNLNANVVSSPPSKRIHTDKQFID 1062
SA +D P + + + A+ V + P+ + K D
Sbjct: 1073 SATREDTPLSQNESTRASTVPNLPTTMVTNQKDTND 1108
>YBR245c [K] KOG0385 Chromatin remodeling complex WSTF-ISWI small subunit
Length = 1129
Score = 984 bits (2544), Expect = 0.0
Identities = 522/1023 (51%), Positives = 698/1023 (68%), Gaps = 64/1023 (6%)
Query: 10 HDEKYWSERRSKFLLDVDPKIAKQRNKEDTYIRFKHLLQITDLFRHFIGIRAKYDKNMQK 69
HD + S ++ L D + K+ + E T RF+HLL ++ LF+HFI +A D ++
Sbjct: 81 HDPE--SNKKRYLLKDAN---GKKFDLEGTTKRFEHLLSLSGLFKHFIESKAAKDPKFRQ 135
Query: 70 LLKTIDAENKVAGTLKEPAGHLARAPRHYRKXXXXXXXXXXXXXXXXXXXXXXXXXQSPS 129
+L ++ ENK G K + R + + +SP+
Sbjct: 136 VLDVLE-ENKANGKGKGKHQDVRRRKTEHEEDAELLKEEDSDDDESIEFQFR----ESPA 190
Query: 130 FIKEGKLRDYQVYGLNWLISLHESKLSGILADEMGLGKTLQSISFLGYLRYIKGIEGPYI 189
++ G+LR YQ+ G+NWL+SLH++K++GILADEMGLGKTLQ+ISFLGYLRYI+ I GP++
Sbjct: 191 YVN-GQLRPYQIQGVNWLVSLHKNKIAGILADEMGLGKTLQTISFLGYLRYIEKIPGPFL 249
Query: 190 VIVPKSTLDNWQREFAKWTPEVKTVILQGDKDFRKELIETKILTCNFDVLITSYEMVLKE 249
VI PKSTL+NW RE +WTP+V ILQGDK+ R ELI+ K+L C+FDV+I SYE++++E
Sbjct: 250 VIAPKSTLNNWLREINRWTPDVNAFILQGDKEERAELIQKKLLGCDFDVVIASYEIIIRE 309
Query: 250 KLTLKRFAWEYILIDEAHRIKNEQSALSQVIRLFYSKNRLLITGTPLQNNLHELWALLNF 309
K LK+ WEYI+IDEAHRIKNE+S LSQV+R F S+NRLLITGTPLQNNLHELWALLNF
Sbjct: 310 KSPLKKINWEYIIIDEAHRIKNEESMLSQVLREFTSRNRLLITGTPLQNNLHELWALLNF 369
Query: 310 LLPDVFGDSEVFDEWFQQNGKEEDQEVVVQQLHSVLQPFLLRRVKSEVEKSLLPKKEINL 369
LLPD+F D++ FD+WF EEDQ+ +V+QLH+VLQPFLLRR+KS+VE SLLPKKE+NL
Sbjct: 370 LLPDIFSDAQDFDDWFSSESTEEDQDKIVKQLHTVLQPFLLRRIKSDVETSLLPKKELNL 429
Query: 370 YVGMTDMQIEWYKSLLEKDIDAVNGAVGKREGKTRLLNIVMQLRKCCNHPYLFEGAEPGP 429
YVGM+ MQ +WYK +LEKD+DAVNG+ G +E KTRLLNI+MQLRKCCNHPYLF+GAEPGP
Sbjct: 430 YVGMSSMQKKWYKKILEKDLDAVNGSNGSKESKTRLLNIMMQLRKCCNHPYLFDGAEPGP 489
Query: 430 PYTTDEHLVFNSGKMIVLDKLLKKKKEQGSRVLIFSQMSRLLDILEDYCYFRGYEYCRID 489
PYTTDEHLV+N+ K+ VLDKLLKK KE+GSRVLIFSQMSRLLDILEDYCYFR YEYCRID
Sbjct: 490 PYTTDEHLVYNAAKLQVLDKLLKKLKEEGSRVLIFSQMSRLLDILEDYCYFRNYEYCRID 549
Query: 490 GSTSHDERVEAIDEYNKPNSEKFIFLLTTRAGGLGINLVTADTVVLYDSDWNPQADLQAM 549
GST+H++R++AID+YN P+S+KF+FLLTTRAGGLGINL +AD VVLYDSDWNPQADLQAM
Sbjct: 550 GSTAHEDRIQAIDDYNAPDSKKFVFLLTTRAGGLGINLTSADVVVLYDSDWNPQADLQAM 609
Query: 550 DRAHRIGQKKQVFVYRFVTENAIEEKVIERAAQKLRLDQLVIQQG--TGKKTSALTNNKD 607
DRAHRIGQKKQV V+R VT+N++EEK++ERA QKLRLDQLVIQQ + KK ++KD
Sbjct: 610 DRAHRIGQKKQVKVFRLVTDNSVEEKILERATQKLRLDQLVIQQNRTSLKKKENKADSKD 669
Query: 608 DLIDMIQFGARDML------------QHGSGNITVDEDIDEILKKGERKTLELNAKYESL 655
L+ MIQ GA D+ + GSG D D+DE+L K E KT LNAKYE+L
Sbjct: 670 ALLSMIQHGAADVFKSGTSTGSAGTPEPGSGEKGDDIDLDELLLKSENKTKSLNAKYETL 729
Query: 656 GLDDLQKFNGMADQSAYEWNGTNFEKK-KPDDHTVDWINPPKRERRREQPLYSVDDYYRE 714
GLDDLQKFN SAYEWNG +F+KK + D + +NP KRER+ YS+D+YY++
Sbjct: 730 GLDDLQKFN---QDSAYEWNGQDFKKKIQRDIISPLLLNPTKRERKEN---YSIDNYYKD 783
Query: 715 VIGNGKSKPSGSNTPALKLPKQPKVIRMTYYQFAHPEFVRLQELEQLWYKKSVGYKITAY 774
V+ G+ S+TP+ P+ PK +Q P+ L E E++W K GY T
Sbjct: 784 VLNTGR-----SSTPS--HPRMPKPHVFHSHQLQPPQLKVLYEKERMWTAKKTGYVPTMD 836
Query: 775 DVKEHAXXXXXXXXXXXXXXXXXXXXXTNNAQKQEDDIDAKIAEEQAKIDAAEEFTDENL 834
DVK E++ K+ + ++ ++ T+E
Sbjct: 837 DVK-----------------------AAYGDISDEEEKKQKLELLKLSVNNSQPLTEEEE 873
Query: 835 EQKQRFLEESFYNWNKREFLAFISACIKFGRDNYVSISKAIHT-KTPEEVQRYSETFWKR 893
+ K + E F NWNK EF FI+ K+GR++ +I++ + KT EEV+ Y++ FW
Sbjct: 874 KMKADWESEGFTNWNKLEFRKFITVSGKYGRNSIQAIARELAPGKTLEEVRAYAKAFWSN 933
Query: 894 YKEVQGWEKYVANIEAGEKKTEKLKIQETIXXXXXXXXXXPLVELKILYPP-NNTRRTYN 952
+ ++ +EKY+ IE E+K +++K+Q+ P +LK+ +PP +N +RTY+
Sbjct: 934 IERIEDYEKYLKIIENEEEKIKRVKMQQEALRRKLSEYKNPFFDLKLKHPPSSNNKRTYS 993
Query: 953 SLEDIFLLVTVGNLGLFASNLYERVKQEILKSPLFIFSWFIKTRTPLDISKRIATLLTLV 1012
ED F+L+ + GL ++YE V+ EI PLF ++ ++RTP+++++R TLL +
Sbjct: 994 EEEDRFILLMLFKYGLDRDDVYELVRDEIRDCPLFELDFYFRSRTPVELARRGNTLLQCL 1053
Query: 1013 QRE 1015
++E
Sbjct: 1054 EKE 1056
>Hs21071058 [K] KOG0385 Chromatin remodeling complex WSTF-ISWI small subunit
Length = 1052
Score = 898 bits (2321), Expect = 0.0
Identities = 482/1009 (47%), Positives = 646/1009 (63%), Gaps = 54/1009 (5%)
Query: 16 SERRSKFLLDVDPKIAKQRNKEDTYIRFKHLLQITDLFRHFIGIRAKYDKNMQKLLKTID 75
S + K + + DP +++ + D RF++LL+ T+LF HFI A+ K LK
Sbjct: 66 SPGKQKEIQEPDPTY-EEKMQTDRANRFEYLLKQTELFAHFIQPAAQ--KTPTSPLKMKP 122
Query: 76 AENKVAGTLKEPAGHLARAPRHYRKXXXXXXXXXXXXXXXXXXXXXXXXXQSPSFIKEGK 135
++ K+ +L + + SPS++K GK
Sbjct: 123 GRPRIK---KDEKQNLLSVGDYRHRRTEQEEDEELLTESSKATNVCTRFEDSPSYVKWGK 179
Query: 136 LRDYQVYGLNWLISLHESKLSGILADEMGLGKTLQSISFLGYLRYIKGIEGPYIVIVPKS 195
LRDYQV GLNWLISL+E+ ++GILADEMGLGKTLQ+IS LGY+++ + I GP++V+VPKS
Sbjct: 180 LRDYQVRGLNWLISLYENGINGILADEMGLGKTLQTISLLGYMKHYRNIPGPHMVLVPKS 239
Query: 196 TLDNWQREFAKWTPEVKTVILQGDKDFRKELIETKILTCNFDVLITSYEMVLKEKLTLKR 255
TL NW EF +W P +++V L GDK+ R + +L +DV +TSYEM++KEK K+
Sbjct: 240 TLHNWMSEFKRWVPTLRSVCLIGDKEQRAAFVRDVLLPGEWDVCVTSYEMLIKEKSVFKK 299
Query: 256 FAWEYILIDEAHRIKNEQSALSQVIRLFYSKNRLLITGTPLQNNLHELWALLNFLLPDVF 315
F W Y++IDEAHRIKNE+S LS+++R F + NRLL+TGTPLQNNLHELW+LLNFLLPDVF
Sbjct: 300 FNWRYLVIDEAHRIKNEKSKLSEIVREFKTTNRLLLTGTPLQNNLHELWSLLNFLLPDVF 359
Query: 316 GDSEVFDEWFQQNGKEEDQEVVVQQLHSVLQPFLLRRVKSEVEKSLLPKKEINLYVGMTD 375
++ FD WF N DQ++V ++LH VL+PFLLRR+K++VEKSL PKKE+ +YVG++
Sbjct: 360 NSADDFDSWFDTNNCLGDQKLV-ERLHMVLRPFLLRRIKADVEKSLPPKKEVKIYVGLSK 418
Query: 376 MQIEWYKSLLEKDIDAVNGAVGKREGKTRLLNIVMQLRKCCNHPYLFEGAEPGPPYTTDE 435
MQ EWY +L KDID +N A GK + K RLLNI+MQLRKCCNHPYLF+GAEPGPPYTTD
Sbjct: 419 MQREWYTRILMKDIDILNSA-GKMD-KMRLLNILMQLRKCCNHPYLFDGAEPGPPYTTDM 476
Query: 436 HLVFNSGKMIVLDKLLKKKKEQGSRVLIFSQMSRLLDILEDYCYFRGYEYCRIDGSTSHD 495
HLV NSGKM+VLDKLL K KEQGSRVLIFSQM+R+LDILEDYC +R YEYCR+DG T HD
Sbjct: 477 HLVTNSGKMVVLDKLLPKLKEQGSRVLIFSQMTRVLDILEDYCMWRNYEYCRLDGQTPHD 536
Query: 496 ERVEAIDEYNKPNSEKFIFLLTTRAGGLGINLVTADTVVLYDSDWNPQADLQAMDRAHRI 555
ER ++I+ YN+PNS KF+F+L+TRAGGLGINL TAD V+LYDSDWNPQ DLQAMDRAHRI
Sbjct: 537 ERQDSINAYNEPNSTKFVFMLSTRAGGLGINLATADVVILYDSDWNPQVDLQAMDRAHRI 596
Query: 556 GQKKQVFVYRFVTENAIEEKVIERAAQKLRLDQLVIQQGTGKKTSALTNNKDDLIDMIQF 615
GQ K V V+RF+T+N +EE+++ERA KLRLD +VIQQG + KD+++ MI+
Sbjct: 597 GQTKTVRVFRFITDNTVEERIVERAEMKLRLDSIVIQQGRLVDQNLNKIGKDEMLQMIRH 656
Query: 616 GARDMLQHGSGNITVDEDIDEILKKGERKTLELNAKYESLGLDDLQKFNGMADQSAYEWN 675
GA + IT DEDID IL++G +KT E+N K +G L+ F + S Y +
Sbjct: 657 GATHVFASKESEIT-DEDIDGILERGAKKTAEMNEKLSKMGESSLRNFTMDTESSVYNFE 715
Query: 676 GTNFEKKKPDDHTVDWINPPKRERRREQPLYSVDDYYREVIGNGKSKPSGSNTPALKLPK 735
G ++ +K+ T +WI PPKRER+ Y+VD Y+RE + + K A K P+
Sbjct: 716 GEDYREKQKIAFT-EWIEPPKRERKAN---YAVDAYFREALRVSEPK-------APKAPR 764
Query: 736 QPKVIRMTYYQFAHPEFVRLQELEQLWYKKSVGYKITAYDVKEHAXXXXXXXXXXXXXXX 795
PK + +QF P L E E L+Y+K++GYK+
Sbjct: 765 PPKQPNVQDFQFFPPRLFELLEKEILFYRKTIGYKVP----------------------- 801
Query: 796 XXXXXXTNNAQKQEDDIDAKIAEEQAKIDAAEEFTDENLEQKQRFLEESFYNWNKREFLA 855
N AQ Q+ EEQ KID AE DE LE+K++ L + F NWNKR+F
Sbjct: 802 -RNPELPNAAQAQK--------EEQLKIDEAESLNDEELEEKEKLLTQGFTNWNKRDFNQ 852
Query: 856 FISACIKFGRDNYVSISKAIHTKTPEEVQRYSETFWKRYKEVQGWEKYVANIEAGEKKTE 915
FI A K+GRD+ +I++ + KTPEEV YS FW+R E+Q EK +A IE GE + +
Sbjct: 853 FIKANEKWGRDDIENIAREVEGKTPEEVIEYSAVFWERCNELQDIEKIMAQIERGEARIQ 912
Query: 916 KLKIQETIXXXXXXXXXXPLVELKILYPPNNTRRTYNSLEDIFLLVTVGNLGLFASNLYE 975
+ + P +L+I Y N + Y ED FL+ + LG N+Y+
Sbjct: 913 RRISIKKALDTKIGRYKAPFHQLRISY-GTNKGKNYTEEEDRFLICMLHKLGFDKENVYD 971
Query: 976 RVKQEILKSPLFIFSWFIKTRTPLDISKRIATLLTLVQREHEGVEHKRK 1024
++Q I SP F F WF+K+RT +++ +R TL+TL++RE+ +E K K
Sbjct: 972 ELRQCIRNSPQFRFDWFLKSRTAMELQRRCNTLITLIERENMELEEKEK 1020
>Hs21071044 [K] KOG0385 Chromatin remodeling complex WSTF-ISWI small subunit
Length = 1054
Score = 872 bits (2253), Expect = 0.0
Identities = 474/1023 (46%), Positives = 644/1023 (62%), Gaps = 73/1023 (7%)
Query: 25 DVDPKIAKQRNKEDTYIRFKHLLQITDLFRHFIGIRAKYDKNMQKLLKTIDAENKVAGTL 84
++DP+ +++ K D RF+ LL+ T+LF HFI A+ +K K
Sbjct: 78 EMDPEY-EEKMKADRAKRFEFLLKQTELFAHFIQPSAQKSPTSPLNMKLGRPRIK----- 131
Query: 85 KEPAGHLARAPRHYRKXXXXXXXXXXXXXXXXXXXXXXXXXQSPSFIKEGKLRDYQVYGL 144
K+ L A + + SPS++K G LRDYQ+ GL
Sbjct: 132 KDEKQSLISAGDYRHRRTEQEEDEELLSESRKTSNVCIRFEVSPSYVKGGPLRDYQIRGL 191
Query: 145 NWLISLHESKLSGILADEMGLGKTLQSISFLGYLRYIKGIEGPYIVIVPKSTLDNWQREF 204
NWLISL+E+ ++GILADEMGLGKTLQ+I+ LGYL++ + I GP++V+VPKSTL NW EF
Sbjct: 192 NWLISLYENGVNGILADEMGLGKTLQTIALLGYLKHYRNIPGPHMVLVPKSTLHNWMNEF 251
Query: 205 AKWTPEVKTVILQGDKDFRKELIETKILTCNFDVLITSYEMVLKEKLTLKRFAWEYILID 264
+W P ++ + GDKD R I +++ +DV +TSYEMV+KEK K+F W Y++ID
Sbjct: 252 KRWVPSLRVICFVGDKDARAAFIRDEMMPGEWDVCVTSYEMVIKEKSVFKKFHWRYLVID 311
Query: 265 EAHRIKNEQSALSQVIRLFYSKNRLLITGTPLQNNLHELWALLNFLLPDVFGDSEVFDEW 324
EAHRIKNE+S LS+++R F S NRLL+TGTPLQNNLHELWALLNFLLPDVF ++ FD W
Sbjct: 312 EAHRIKNEKSKLSEIVREFKSTNRLLLTGTPLQNNLHELWALLNFLLPDVFNSADDFDSW 371
Query: 325 FQQNGKEEDQEVVVQQLHSVLQPFLLRRVKSEVEKSLLPKKEINLYVGMTDMQIEWYKSL 384
F DQ+ +V++LH+VL+PFLLRR+K++VEKSL PKKEI +Y+G++ MQ EWY +
Sbjct: 372 FDTKNCLGDQK-LVERLHAVLKPFLLRRIKTDVEKSLPPKKEIKIYLGLSKMQREWYTKI 430
Query: 385 LEKDIDAVNGAVGKREGKTRLLNIVMQLRKCCNHPYLFEGAEPGPPYTTDEHLVFNSGKM 444
L KDID +N + GK + K RLLNI+MQLRKCCNHPYLF+GAEPGPPYTTDEH+V NSGKM
Sbjct: 431 LMKDIDVLNSS-GKMD-KMRLLNILMQLRKCCNHPYLFDGAEPGPPYTTDEHIVSNSGKM 488
Query: 445 IVLDKLLKKKKEQGSRVLIFSQMSRLLDILEDYCYFRGYEYCRIDGSTSHDERV------ 498
+VLDKLL K KEQGSRVLIFSQM+RLLDILEDYC +RGYEYCR+DG T H+ER
Sbjct: 489 VVLDKLLAKLKEQGSRVLIFSQMTRLLDILEDYCMWRGYEYCRLDGQTPHEEREDKFLEV 548
Query: 499 ------EAIDEYNKPNSEKFIFLLTTRAGGLGINLVTADTVVLYDSDWNPQADLQAMDRA 552
EAI+ +N PNS KFIF+L+TRAGGLGINL +AD V+LYDSDWNPQ DLQAMDRA
Sbjct: 549 EFLGQREAIEAFNAPNSSKFIFMLSTRAGGLGINLASADVVILYDSDWNPQVDLQAMDRA 608
Query: 553 HRIGQKKQVFVYRFVTENAIEEKVIERAAQKLRLDQLVIQQGTGKKTSALTNNKDDLIDM 612
HRIGQKK V V+R +T+N +EE+++ERA KLRLD +VIQQG + K++++ M
Sbjct: 609 HRIGQKKPVRVFRLITDNTVEERIVERAEIKLRLDSIVIQQGRLIDQQSNKLAKEEMLQM 668
Query: 613 IQFGARDMLQHGSGNITVDEDIDEILKKGERKTLELNAKYESLGLDDLQKFNGMADQSAY 672
I+ GA + +T DEDI IL++GE+KT E+N + + +G L+ F +QS Y
Sbjct: 669 IRHGATHVFASKESELT-DEDITTILERGEKKTAEMNERLQKMGESSLRNFRMDIEQSLY 727
Query: 673 EWNGTNFEKKKPDDHTVDWINPPKRERRREQPLYSVDDYYREVIGNGKSKPSGSNTPALK 732
++ G ++ +K+ V+WI PPKRER+ Y+VD Y+RE + + K K
Sbjct: 728 KFEGEDYREKQKLG-MVEWIEPPKRERKAN---YAVDAYFREALRVSEPK-------IPK 776
Query: 733 LPKQPKVIRMTYYQFAHPEFVRLQELEQLWYKKSVGYKITAY-DVKEHAXXXXXXXXXXX 791
P+ PK + +QF P L E E L+Y+K++GYK+ D+ A
Sbjct: 777 APRPPKQPNVQDFQFFPPRLFELLEKEILYYRKTIGYKVPRNPDIPNPAL---------- 826
Query: 792 XXXXXXXXXXTNNAQKQEDDIDAKIAEEQAKIDAAEEFTDENLEQKQRFLEESFYNWNKR 851
AQ+ EEQ KID AE T E E+K++ L + F NW KR
Sbjct: 827 -------------AQR----------EEQKKIDGAEPLTPEETEEKEKLLTQGFTNWTKR 863
Query: 852 EFLAFISACIKFGRDNYVSISKAIHTKTPEEVQRYSETFWKRYKEVQGWEKYVANIEAGE 911
+F FI A K+GRD+ +I++ + K+PEEV YS FW+R E+Q EK +A IE GE
Sbjct: 864 DFNQFIKANEKYGRDDIDNIAREVEGKSPEEVMEYSAVFWERCNELQDIEKIMAQIERGE 923
Query: 912 KKTEKLKIQETIXXXXXXXXXXPLVELKILYPPNNTRRTYNSLEDIFLLVTVGNLGLFAS 971
+ ++ + P +L+I Y + + Y ED FL+ + +G
Sbjct: 924 ARIQRRISIKKALDAKIARYKAPFHQLRIQY-GTSKGKNYTEEEDRFLICMLHKMGFDRE 982
Query: 972 NLYERVKQEILKSPLFIFSWFIKTRTPLDISKRIATLLTLVQREHEGVE-----HKRKRK 1026
N+YE ++Q + +P F F WFIK+RT ++ +R TL++L+++E+ +E K+KR
Sbjct: 983 NVYEELRQCVRNAPQFRFDWFIKSRTAMEFQRRCNTLISLIEKENMEIEERERAEKKKRA 1042
Query: 1027 TVT 1029
T T
Sbjct: 1043 TKT 1045
>7303422 [K] KOG0385 Chromatin remodeling complex WSTF-ISWI small subunit
Length = 1027
Score = 867 bits (2239), Expect = 0.0
Identities = 475/1008 (47%), Positives = 633/1008 (62%), Gaps = 74/1008 (7%)
Query: 25 DVDPKIAKQRNKEDTYIRFKHLLQITDLFRHFIGIRAKYD---KNMQKLLKTIDAENKVA 81
+ D KI R++ RF LL+ T++F HF+ AK K K +K D E VA
Sbjct: 34 EFDNKIEADRSR-----RFDFLLKQTEIFTHFMTNSAKSPTKPKGRPKKIKDKDKEKDVA 88
Query: 82 GTLKEPAGHLARAPRHYRKXXXXXXXXXXXXXXXXXXXXXXXXXQSPSFIKEGKLRDYQV 141
+R SP++IK G++RDYQ+
Sbjct: 89 D---------------HRHRKTEQEEDEELLAEDSATKEIFRFDASPAYIKSGEMRDYQI 133
Query: 142 YGLNWLISLHESKLSGILADEMGLGKTLQSISFLGYLRYIKGIEGPYIVIVPKSTLDNWQ 201
GLNW+ISL+E+ ++GILADEMGLGKTLQ+IS LGYL++ K GP+IVIVPKSTL NW
Sbjct: 134 RGLNWMISLYENGINGILADEMGLGKTLQTISLLGYLKHFKNQAGPHIVIVPKSTLQNWV 193
Query: 202 REFAKWTPEVKTVILQGDKDFRKELIETKILTCNFDVLITSYEMVLKEKLTLKRFAWEYI 261
EF KW P ++ V L GD+D R I ++ +DV +TSYEM ++EK K+F W Y+
Sbjct: 194 NEFKKWCPSLRAVCLIGDQDTRNTFIRDVLMPGEWDVCVTSYEMCIREKSVFKKFNWRYL 253
Query: 262 LIDEAHRIKNEQSALSQVIRLFYSKNRLLITGTPLQNNLHELWALLNFLLPDVFGDSEVF 321
+IDEAHRIKNE+S LS+++R F + NRLLITGTPLQNNLHELWALLNFLLPDVF SE F
Sbjct: 254 VIDEAHRIKNEKSKLSEILREFKTANRLLITGTPLQNNLHELWALLNFLLPDVFNSSEDF 313
Query: 322 DEWFQQNGKEEDQEVVVQQLHSVLQPFLLRRVKSEVEKSLLPKKEINLYVGMTDMQIEWY 381
DEWF N D + ++ +LH+VL+PFLLRR+K+EVEK L PKKE+ ++VG++ MQ +WY
Sbjct: 314 DEWFNTNTCLGD-DALITRLHAVLKPFLLRRLKAEVEKRLKPKKEMKIFVGLSKMQRDWY 372
Query: 382 KSLLEKDIDAVNGAVGKREGKTRLLNIVMQLRKCCNHPYLFEGAEPGPPYTTDEHLVFNS 441
+L KDID VNGA GK E K RL NI+MQLRKC NHPYLF+GAEPGPPYTTD HLV+NS
Sbjct: 373 TKVLLKDIDVVNGA-GKVE-KMRLQNILMQLRKCTNHPYLFDGAEPGPPYTTDTHLVYNS 430
Query: 442 GKMIVLDKLLKKKKEQGSRVLIFSQMSRLLDILEDYCYFRGYEYCRIDGSTSHDERVEAI 501
GKM +LDKLL K +EQGSRVLIFSQM+R+LDILEDYC++R Y YCR+DG T H++R I
Sbjct: 431 GKMAILDKLLPKLQEQGSRVLIFSQMTRMLDILEDYCHWRNYNYCRLDGQTPHEDRNRQI 490
Query: 502 DEYNKPNSEKFIFLLTTRAGGLGINLVTADTVVLYDSDWNPQADLQAMDRAHRIGQKKQV 561
E+N NS KF+F+L+TRAGGLGINL TAD V++YDSDWNPQ DLQAMDRAHRIGQKKQV
Sbjct: 491 QEFNMDNSAKFLFMLSTRAGGLGINLATADVVIIYDSDWNPQMDLQAMDRAHRIGQKKQV 550
Query: 562 FVYRFVTENAIEEKVIERAAQKLRLDQLVIQQGTGKKTSALTNNKDDLIDMIQFGARDML 621
V+R +TE+ +EEK++ERA KLRLD++VIQ G + NKD+++++I+FGA +
Sbjct: 551 RVFRLITESTVEEKIVERAEVKLRLDKMVIQGGRLVDNRSNQLNKDEMLNIIRFGANQVF 610
Query: 622 QHGSGNITVDEDIDEILKKGERKTLELNAKYESLGLDDLQKF----NGMA-DQSAYEWNG 676
+IT DEDID IL++GE KT E A +SLG L+ F NG A S Y++ G
Sbjct: 611 SSKETDIT-DEDIDVILERGEAKTAEQKAALDSLGESSLRTFTMDTNGEAGTSSVYQFEG 669
Query: 677 TNFEKKKPDDHTVDWINPPKRERRREQPLYSVDDYYREVIGNGKSKPSGSNTPALKLPKQ 736
++ +K+ + +WI PPKRER+ Y+VD Y+RE + + K A K P+
Sbjct: 670 EDWREKQKLNALGNWIEPPKRERKAN---YAVDAYFREALRVSEPK-------APKAPRP 719
Query: 737 PKVIRMTYYQFAHPEFVRLQELEQLWYKKSVGYKITAYDVKEHAXXXXXXXXXXXXXXXX 796
PK + +QF P L + E +++K+VGYK+
Sbjct: 720 PKQPIVQDFQFFPPRLFELLDQEIYYFRKTVGYKV------------------------- 754
Query: 797 XXXXXTNNAQKQEDDIDAKIAEEQAKIDAAEEFTDENLEQKQRFLEESFYNWNKREFLAF 856
N + D + EEQ KID AE T+E +++K+ L + F W KR+F F
Sbjct: 755 -----PKNTELGSDATKVQ-REEQRKIDEAEPLTEEEIQEKENLLSQGFTAWTKRDFNQF 808
Query: 857 ISACIKFGRDNYVSISKAIHTKTPEEVQRYSETFWKRYKEVQGWEKYVANIEAGEKKTEK 916
I A K+GRD+ +I+K + KTPEEV Y+ FW+R E+Q E+ + IE GE K ++
Sbjct: 809 IKANEKYGRDDIDNIAKDVEGKTPEEVIEYNAVFWERCTELQDIERIMGQIERGEGKIQR 868
Query: 917 LKIQETIXXXXXXXXXXPLVELKILYPPNNTRRTYNSLEDIFLLVTVGNLGLFASNLYER 976
+ P +L++ Y NN + Y +ED FL+ + LG N+YE
Sbjct: 869 RLSIKKALDQKMSRYRAPFHQLRLQY-GNNKGKNYTEIEDRFLVCMLHKLGFDKENVYEE 927
Query: 977 VKQEILKSPLFIFSWFIKTRTPLDISKRIATLLTLVQREHEGVEHKRK 1024
++ I SP F F WFIK+RT L++ +R TL+TL++RE+ +E K +
Sbjct: 928 LRAAIRASPQFRFDWFIKSRTALELQRRCNTLITLIERENIELEEKER 975
>CE00789 [K] KOG0385 Chromatin remodeling complex WSTF-ISWI small subunit
Length = 971
Score = 836 bits (2159), Expect = 0.0
Identities = 449/935 (48%), Positives = 610/935 (65%), Gaps = 58/935 (6%)
Query: 126 QSPSFIKEGKLRDYQVYGLNWLISLHESKLSGILADEMGLGKTLQSISFLGYLRYIKGIE 185
+SP +I+ G++RDYQV GLNWL SL +K++GILADEMGLGKTLQ+IS +GY+++ K
Sbjct: 84 KSPFYIENGEMRDYQVRGLNWLASLQHNKINGILADEMGLGKTLQTISMIGYMKHYKNKA 143
Query: 186 GPYIVIVPKSTLDNWQREFAKWTPEVKTVILQGDKDFRKELIETKILTCNFDVLITSYEM 245
P++VIVPKSTL NW EF KW P + V+L GD+ R +++ IL FDV T+YEM
Sbjct: 144 SPHLVIVPKSTLQNWANEFKKWCPSINAVVLIGDEAARNQVLRDVILPQKFDVCCTTYEM 203
Query: 246 VLKEKLTLKRFAWEYILIDEAHRIKNEQSALSQVIRLFYSKNRLLITGTPLQNNLHELWA 305
+LK K LK+ W YI+IDEAHRIKNE+S LS+ +R S+NRLLITGTPLQNNLHELWA
Sbjct: 204 MLKVKTQLKKLNWRYIIIDEAHRIKNEKSKLSETVRELNSENRLLITGTPLQNNLHELWA 263
Query: 306 LLNFLLPDVFGDSEVFDEWFQQNGKEEDQEVVVQQLHSVLQPFLLRRVKSEVEKSLLPKK 365
LLNFLLPD+F S+ FD WF + + ++V Q+LH VLQPFLLRR+KS+VEKSLLPKK
Sbjct: 264 LLNFLLPDIFTSSDDFDSWFSNDAMSGNTDLV-QRLHKVLQPFLLRRIKSDVEKSLLPKK 322
Query: 366 EINLYVGMTDMQIEWYKSLLEKDIDAVNGAVGKREGKTRLLNIVMQLRKCCNHPYLFEGA 425
E+ +YVG++ MQ EWY +L KDID +NGA GK E K RL+NI+M LRKC NHPYLF+GA
Sbjct: 323 EVKVYVGLSKMQREWYTKVLMKDIDIINGA-GKVE-KARLMNILMHLRKCVNHPYLFDGA 380
Query: 426 EPGPPYTTDEHLVFNSGKMIVLDKLLKKKKEQGSRVLIFSQMSRLLDILEDYCYFRGYEY 485
EPGPP+TTD+HLV NSGKM+VLDKLL K KEQGSRVLIFSQ SR+LD+LED+C++R YEY
Sbjct: 381 EPGPPFTTDQHLVDNSGKMVVLDKLLMKFKEQGSRVLIFSQFSRMLDLLEDFCWWRHYEY 440
Query: 486 CRIDGSTSHDERVEAIDEYNKPNSEKFIFLLTTRAGGLGINLVTADTVVLYDSDWNPQAD 545
CR+DGST H++R AI+ YN P+S+KFIF+LTTRAGGLGINL TAD V++YDSDWNPQ+D
Sbjct: 441 CRLDGSTPHEDRSNAIEAYNAPDSKKFIFMLTTRAGGLGINLATADVVIIYDSDWNPQSD 500
Query: 546 LQAMDRAHRIGQKKQVFVYRFVTENAIEEKVIERAAQKLRLDQLVIQQGTGKKTSALTNN 605
LQAMDRAHRIGQKKQV V+R +TEN ++E++IE+A KLRLD +VIQQG + T
Sbjct: 501 LQAMDRAHRIGQKKQVRVFRLITENTVDERIIEKAEAKLRLDNIVIQQGRMSEAQK-TLG 559
Query: 606 KDDLIDMIQFGARDMLQHGSGNITVDEDIDEILKKGERKTLELNAKYESLGLDDLQK--F 663
K D+I MI+ GA + I+ D+DID IL+K E KT ELN K + ++L+ F
Sbjct: 560 KGDMISMIRHGAEQVFAAKDSTIS-DDDIDTILEKAEVKTAELNEKMGKIDENNLRNMTF 618
Query: 664 NGMADQSAYEWNGTNFEKKKPDDHTVDWINPPKRERRREQPLYSVDDYYREVIGNGKSKP 723
A + Y++ G N++ K+ D WI PPKRER+ Y VD YY+E + G
Sbjct: 619 EDNAKFTVYQFEGENYKAKQADGMGHFWIEPPKRERKAN---YQVDLYYKEAMRAGNPTE 675
Query: 724 SGSNTPALKLPKQPKVIRMTYYQFAHPEFVRLQELEQLWYKKSVGYKITAYDVKEHAXXX 783
S P KLP ++ +QF L + E Y+K++GY
Sbjct: 676 KQSKAPRPKLP------QVFDFQFYPRRLFELLDKEIYHYRKTIGYV------------- 716
Query: 784 XXXXXXXXXXXXXXXXXXTNNAQKQED----DIDAKIAEEQAKIDAAEEFTDENLEQKQR 839
A++ +D + + + AEEQ I+ A TD+ E+K
Sbjct: 717 ---------------------AERPKDVPPKEAEKRQAEEQKLINNARPLTDKEQEEKAE 755
Query: 840 FLEESFYNWNKREFLAFISACIKFGRDNYVSISKAIHTKTPEEVQRYSETFWKRYKEVQG 899
L +S +W KREF F+ K+GR++ SI+K + + EE+Q Y++ FW+R +E+Q
Sbjct: 756 LLTQSVTDWTKREFQQFVRGNEKYGREDLESIAKEME-RPLEEIQSYAKVFWERIEELQD 814
Query: 900 WEKYVANIEAGEKKTEKLKIQETIXXXXXXXXXXPLVELKILYPPNNTRRTYNSLEDIFL 959
EK ++ IE GE + ++ + P +L+I Y N +TY ED FL
Sbjct: 815 SEKVLSQIEKGEARIQRKYAVKKALDAKIAKYKAPFQQLRISY-GTNKGKTYTEEEDRFL 873
Query: 960 LVTVGNLGLFASNLYERVKQEILKSPLFIFSWFIKTRTPLDISKRIATLLTLVQREHEGV 1019
+ LG N++E ++Q + +P F F WF+K+RT +++ +R TL+TL++RE G
Sbjct: 874 VCETHRLGHDKENVFEELRQSVRMAPQFRFDWFLKSRTAMELQRRCNTLITLIERE-MGE 932
Query: 1020 EHKRKRKTVTSADDQPNDSHNLNANVVSSPPSKRI 1054
+ K VT+AD + + + +L+ + +P +K++
Sbjct: 933 VVESKPVIVTAADKKKSVAKDLSKS-SGTPTAKKV 966
>Hs21071046 [K] KOG0385 Chromatin remodeling complex WSTF-ISWI small subunit
Length = 1033
Score = 832 bits (2149), Expect = 0.0
Identities = 461/1023 (45%), Positives = 626/1023 (61%), Gaps = 94/1023 (9%)
Query: 25 DVDPKIAKQRNKEDTYIRFKHLLQITDLFRHFIGIRAKYDKNMQKLLKTIDAENKVAGTL 84
++DP+ +++ K D RF+ LL+ T+LF HFI A+ +K K
Sbjct: 78 EMDPEY-EEKMKADRAKRFEFLLKQTELFAHFIQPSAQKSPTSPLNMKLGRPRIK----- 131
Query: 85 KEPAGHLARAPRHYRKXXXXXXXXXXXXXXXXXXXXXXXXXQSPSFIKEGKLRDYQVYGL 144
K+ L A + + SPS++K G LRDYQ+ GL
Sbjct: 132 KDEKQSLISAGDYRHRRTEQEEDEELLSESRKTSNVCIRFEVSPSYVKGGPLRDYQIRGL 191
Query: 145 NWLISLHESKLSGILADEMGLGKTLQSISFLGYLRYIKGIEGPYIVIVPKSTLDNWQREF 204
NWLISL+E+ ++GILADE I GP++V+VPKSTL NW EF
Sbjct: 192 NWLISLYENGVNGILADE---------------------IPGPHMVLVPKSTLHNWMNEF 230
Query: 205 AKWTPEVKTVILQGDKDFRKELIETKILTCNFDVLITSYEMVLKEKLTLKRFAWEYILID 264
+W P ++ + GDKD R I +++ +DV +TSYEMV+KEK K+F W Y++ID
Sbjct: 231 KRWVPSLRVICFVGDKDARAAFIRDEMMPGEWDVCVTSYEMVIKEKSVFKKFHWRYLVID 290
Query: 265 EAHRIKNEQSALSQVIRLFYSKNRLLITGTPLQNNLHELWALLNFLLPDVFGDSEVFDEW 324
EAHRIKNE+S LS+++R F S NRLL+TGTPLQNNLHELWALLNFLLPDVF ++ FD W
Sbjct: 291 EAHRIKNEKSKLSEIVREFKSTNRLLLTGTPLQNNLHELWALLNFLLPDVFNSADDFDSW 350
Query: 325 FQQNGKEEDQEVVVQQLHSVLQPFLLRRVKSEVEKSLLPKKEINLYVGMTDMQIEWYKSL 384
F DQ+ +V++LH+VL+PFLLRR+K++VEKSL PKKEI +Y+G++ MQ EWY +
Sbjct: 351 FDTKNCLGDQK-LVERLHAVLKPFLLRRIKTDVEKSLPPKKEIKIYLGLSKMQREWYTKI 409
Query: 385 LEKDIDAVNGAVGKREGKTRLLNIVMQLRKCCNHPYLFEGAEPGPPYTTDEHLVFNSGKM 444
L KDID +N + GK + K RLLNI+MQLRKCCNHPYLF+GAEPGPPYTTDEH+V NSGKM
Sbjct: 410 LMKDIDVLNSS-GKMD-KMRLLNILMQLRKCCNHPYLFDGAEPGPPYTTDEHIVSNSGKM 467
Query: 445 IVLDKLLKKKKEQGSRVLIFSQMSRLLDILEDYCYFRGYEYCRIDGSTSHDERV------ 498
+VLDKLL K KEQGSRVLIFSQM+RLLDILEDYC +RGYEYCR+DG T H+ER
Sbjct: 468 VVLDKLLAKLKEQGSRVLIFSQMTRLLDILEDYCMWRGYEYCRLDGQTPHEEREDKFLEV 527
Query: 499 ------EAIDEYNKPNSEKFIFLLTTRAGGLGINLVTADTVVLYDSDWNPQADLQAMDRA 552
EAI+ +N PNS KFIF+L+TRAGGLGINL +AD V+LYDSDWNPQ DLQAMDRA
Sbjct: 528 EFLGQREAIEAFNAPNSSKFIFMLSTRAGGLGINLASADVVILYDSDWNPQVDLQAMDRA 587
Query: 553 HRIGQKKQVFVYRFVTENAIEEKVIERAAQKLRLDQLVIQQGTGKKTSALTNNKDDLIDM 612
HRIGQKK V V+R +T+N +EE+++ERA KLRLD +VIQQG + K++++ M
Sbjct: 588 HRIGQKKPVRVFRLITDNTVEERIVERAEIKLRLDSIVIQQGRLIDQQSNKLAKEEMLQM 647
Query: 613 IQFGARDMLQHGSGNITVDEDIDEILKKGERKTLELNAKYESLGLDDLQKFNGMADQSAY 672
I+ GA + +T DEDI IL++GE+KT E+N + + +G L+ F +QS Y
Sbjct: 648 IRHGATHVFASKESELT-DEDITTILERGEKKTAEMNERLQKMGESSLRNFRMDIEQSLY 706
Query: 673 EWNGTNFEKKKPDDHTVDWINPPKRERRREQPLYSVDDYYREVIGNGKSKPSGSNTPALK 732
++ G ++ +K+ V+WI PPKRER+ Y+VD Y+RE + + K K
Sbjct: 707 KFEGEDYREKQKLG-MVEWIEPPKRERKAN---YAVDAYFREALRVSEPK-------IPK 755
Query: 733 LPKQPKVIRMTYYQFAHPEFVRLQELEQLWYKKSVGYKITAY-DVKEHAXXXXXXXXXXX 791
P+ PK + +QF P L E E L+Y+K++GYK+ D+ A
Sbjct: 756 APRPPKQPNVQDFQFFPPRLFELLEKEILYYRKTIGYKVPRNPDIPNPAL---------- 805
Query: 792 XXXXXXXXXXTNNAQKQEDDIDAKIAEEQAKIDAAEEFTDENLEQKQRFLEESFYNWNKR 851
AQ+ EEQ KID AE T E E+K++ L + F NW KR
Sbjct: 806 -------------AQR----------EEQKKIDGAEPLTPEETEEKEKLLTQGFTNWTKR 842
Query: 852 EFLAFISACIKFGRDNYVSISKAIHTKTPEEVQRYSETFWKRYKEVQGWEKYVANIEAGE 911
+F FI A K+GRD+ +I++ + K+PEEV YS FW+R E+Q EK +A IE GE
Sbjct: 843 DFNQFIKANEKYGRDDIDNIAREVEGKSPEEVMEYSAVFWERCNELQDIEKIMAQIERGE 902
Query: 912 KKTEKLKIQETIXXXXXXXXXXPLVELKILYPPNNTRRTYNSLEDIFLLVTVGNLGLFAS 971
+ ++ + P +L+I Y + + Y ED FL+ + +G
Sbjct: 903 ARIQRRISIKKALDAKIARYKAPFHQLRIQY-GTSKGKNYTEEEDRFLICMLHKMGFDRE 961
Query: 972 NLYERVKQEILKSPLFIFSWFIKTRTPLDISKRIATLLTLVQREHEGVE-----HKRKRK 1026
N+YE ++Q + +P F F WFIK+RT ++ +R TL++L+++E+ +E K+KR
Sbjct: 962 NVYEELRQCVRNAPQFRFDWFIKSRTAMEFQRRCNTLISLIEKENMEIEERERAEKKKRA 1021
Query: 1027 TVT 1029
T T
Sbjct: 1022 TKT 1024
>At3g06400 [K] KOG0385 Chromatin remodeling complex WSTF-ISWI small subunit
Length = 1057
Score = 810 bits (2093), Expect = 0.0
Identities = 481/1079 (44%), Positives = 655/1079 (60%), Gaps = 110/1079 (10%)
Query: 1 MENPVSNNQHDEKYWSERRSKFLLDVDPKIAKQRNKE---------DTYI------RFKH 45
+E+ + + +EK +R K L K+ KQ+ +E D + R K+
Sbjct: 61 VEDDYEDEEDEEKAEISKREKARLKEMQKLKKQKIQEMLESQNASIDADMNNKGKGRLKY 120
Query: 46 LLQITDLFRHFIGIRAKYDKNMQKLLKTIDAENKVAGTLKEPAGHLARAPRHYRKXXXXX 105
LLQ T+LF HF AK D + + K + A + E Y K
Sbjct: 121 LLQQTELFAHF----AKSDGSSSQ--KKAKGRGRHASKITEE-----EEDEEYLKEEEDG 169
Query: 106 XXXXXXXXXXXXXXXXXXXXQSPSFIKEGKLRDYQVYGLNWLISLHESKLSGILADEMGL 165
PS I +GK+RDYQ+ GLNWLI L+E+ ++GILADEMGL
Sbjct: 170 LTGSGNTRLLT----------QPSCI-QGKMRDYQLAGLNWLIRLYENGINGILADEMGL 218
Query: 166 GKTLQSISFLGYLRYIKGIEGPYIVIVPKSTLDNWQREFAKWTPEVKTVILQGDKDFRKE 225
GKTLQ+IS L YL +GI GP++V+ PKSTL NW E ++ P ++ V G+ + R+
Sbjct: 219 GKTLQTISLLAYLHEYRGINGPHMVVAPKSTLGNWMNEIRRFCPVLRAVKFLGNPEERRH 278
Query: 226 LIETKILTCNFDVLITSYEMVLKEKLTLKRFAWEYILIDEAHRIKNEQSALSQVIRLFYS 285
+ E ++ FD+ +TS+EM +KEK L+RF+W YI+IDEAHRIKNE S LS+ +RLF +
Sbjct: 279 IREDLLVAGKFDICVTSFEMAIKEKTALRRFSWRYIIIDEAHRIKNENSLLSKTMRLFST 338
Query: 286 KNRLLITGTPLQNNLHELWALLNFLLPDVFGDSEVFDEWFQQNGKEEDQEVVVQQLHSVL 345
RLLITGTPLQNNLHELWALLNFLLP++F +E FDEWFQ +G E DQ+ VVQQLH VL
Sbjct: 339 NYRLLITGTPLQNNLHELWALLNFLLPEIFSSAETFDEWFQISG-ENDQQEVVQQLHKVL 397
Query: 346 QPFLLRRVKSEVEKSLLPKKEINLYVGMTDMQIEWYKSLLEKDIDAVNGAVGKREGKTRL 405
+PFLLRR+KS+VEK L PKKE L VGM+ MQ ++YK+LL+KD++AVN A G+R+ RL
Sbjct: 398 RPFLLRRLKSDVEKGLPPKKETILKVGMSQMQKQYYKALLQKDLEAVN-AGGERK---RL 453
Query: 406 LNIVMQLRKCCNHPYLFEGAEPGPPYTTDEHLVFNSGKMIVLDKLLKKKKEQGSRVLIFS 465
LNI MQLRKCCNHPYLF+GAEPGPPYTT +HL+ N+GKM++LDKLL K KE+ SRVLIFS
Sbjct: 454 LNIAMQLRKCCNHPYLFQGAEPGPPYTTGDHLITNAGKMVLLDKLLPKLKERDSRVLIFS 513
Query: 466 QMSRLLDILEDYCYFRGYEYCRIDGSTSHDERVEAIDEYNKPNSEKFIFLLTTRAGGLGI 525
QM+RLLDILEDY +RGY YCRIDG+T DER +I+ YNKP SEKF+FLL+TRAGGLGI
Sbjct: 514 QMTRLLDILEDYLMYRGYLYCRIDGNTGGDERDASIEAYNKPGSEKFVFLLSTRAGGLGI 573
Query: 526 NLVTADTVVLYDSDWNPQADLQAMDRAHRIGQKKQVFVYRFVTENAIEEKVIERAAQKLR 585
NL TAD V+LYDSDWNPQ DLQA DRAHRIGQKK+V V+RF TE+AIEEKVIERA +KL
Sbjct: 574 NLATADVVILYDSDWNPQVDLQAQDRAHRIGQKKEVQVFRFCTESAIEEKVIERAYKKLA 633
Query: 586 LDQLVIQQGTGKKTSALTNNKDDLIDMIQFGARDMLQHGSGNITVDEDIDEILKKGERKT 645
LD LVIQQG + + + NKD+L+ M+++GA + IT DEDID I+ KGE T
Sbjct: 634 LDALVIQQGRLAEQKSKSVNKDELLQMVRYGAEMVFSSKDSTIT-DEDIDRIIAKGEEAT 692
Query: 646 LELNAKYESLGLDDLQ-KFNGMADQSAYEWNGTNFEKKKPDDHTV---DWINPPKRERRR 701
EL+AK + D +Q K + AD Y+++ N ++ K D + +W +PPKRER+R
Sbjct: 693 AELDAKMKKFTEDAIQFKMDDSAD--FYDFDDDNKDENKLDFKKIVSDNWNDPPKRERKR 750
Query: 702 EQPLYSVDDYYREVIGNGKSKPSGSNTPALKLPKQPKVIRMTYYQFAHPEFVRLQELEQL 761
YS +Y+++ + G A PK+P++ RM Q +F +Q L +L
Sbjct: 751 N---YSESEYFKQTLRQG----------APAKPKEPRIPRMP--QLHDFQFFNIQRLTEL 795
Query: 762 WYKKSVGYKITAYDVKEHAXXXXXXXXXXXXXXXXXXXXXTNNAQKQEDDIDAKIAEEQA 821
Y+K V Y + T+ + +D ID + E
Sbjct: 796 -YEKEVRYLM-----------------------------QTHQKNQLKDTIDVEEPE--- 822
Query: 822 KIDAAEEFTDENLEQKQRFLEESFYNWNKREFLAFISACIKFGRDNYVSISKAIHTKTPE 881
+ T E +E+K+ LEE F W++R+F F+ AC K+GR++ SI+ + KT E
Sbjct: 823 ---GGDPLTTEEVEEKEGLLEEGFSTWSRRDFNTFLRACEKYGRNDIKSIASEMEGKTEE 879
Query: 882 EVQRYSETFWKRYKEVQGWEKYVANIEAGEKK-TEKLKIQETIXXXXXXXXXXPLVELKI 940
EV+RY++ F +RYKE+ +++ + NIE GE + + K +I + I P +ELKI
Sbjct: 880 EVERYAKVFKERYKELNDYDRIIKNIERGEARISRKDEIMKAI-GKKLDRYRNPWLELKI 938
Query: 941 LYPPNNTRRTYNSLEDIFLLVTVGNLGLFASNLYERVKQEILKSPLFIFSWFIKTRTPLD 1000
Y N + YN D F++ + LG ++ +K S +F F WF+K+RT +
Sbjct: 939 QY-GQNKGKLYNEECDRFMICMIHKLGY---GNWDELKAAFRTSSVFRFDWFVKSRTSQE 994
Query: 1001 ISKRIATLLTLVQREHEGVEHKRK--RKTVTSADDQPNDSHNLNANVVSSPPS--KRIH 1055
+++R TL+ L+++E++ + + + RK A L SP S KR H
Sbjct: 995 LARRCDTLIRLIEKENQEFDERERQARKEKKLAKSATPSKRPLGRQASESPSSTKKRKH 1053
>At5g18620 [K] KOG0385 Chromatin remodeling complex WSTF-ISWI small subunit
Length = 1063
Score = 800 bits (2067), Expect = 0.0
Identities = 453/937 (48%), Positives = 605/937 (64%), Gaps = 75/937 (8%)
Query: 133 EGKLRDYQVYGLNWLISLHESKLSGILADEMGLGKTLQSISFLGYLRYIKGIEGPYIVIV 192
+GKLRDYQ+ GLNWLI L+E+ ++GILADEMGLGKTLQ+IS L YL +GI GP++V+
Sbjct: 178 QGKLRDYQLAGLNWLIRLYENGINGILADEMGLGKTLQTISLLAYLHEYRGINGPHMVVA 237
Query: 193 PKSTLDNWQREFAKWTPEVKTVILQGDKDFRKELIETKILTCNFDVLITSYEMVLKEKLT 252
PKSTL NW E ++ P ++ V G+ + R+ + E ++ FD+ +TS+EM +KEK T
Sbjct: 238 PKSTLGNWMNEIRRFCPVLRAVKFLGNPEERRHIREELLVAGKFDICVTSFEMAIKEKTT 297
Query: 253 LKRFAWEYILIDEAHRIKNEQSALSQVIRLFYSKNRLLITGTPLQNNLHELWALLNFLLP 312
L+RF+W YI+IDEAHRIKNE S LS+ +RLF + RLLITGTPLQNNLHELWALLNFLLP
Sbjct: 298 LRRFSWRYIIIDEAHRIKNENSLLSKTMRLFSTNYRLLITGTPLQNNLHELWALLNFLLP 357
Query: 313 DVFGDSEVFDEWFQQNGKEEDQEVVVQQLHSVLQPFLLRRVKSEVEKSLLPKKEINLYVG 372
+VF +E FDEWFQ +G E DQ+ VVQQLH VL+PFLLRR+KS+VEK L PKKE L VG
Sbjct: 358 EVFSSAETFDEWFQISG-ENDQQEVVQQLHKVLRPFLLRRLKSDVEKGLPPKKETILKVG 416
Query: 373 MTDMQIEWYKSLLEKDIDAVNGAVGKREGKTRLLNIVMQLRKCCNHPYLFEGAEPGPPYT 432
M+ MQ ++YK+LL+KD++ VNG G+R+ RLLNI MQLRKCCNHPYLF+GAEPGPPYT
Sbjct: 417 MSQMQKQYYKALLQKDLEVVNGG-GERK---RLLNIAMQLRKCCNHPYLFQGAEPGPPYT 472
Query: 433 TDEHLVFNSGKMIVLDKLLKKKKEQGSRVLIFSQMSRLLDILEDYCYFRGYEYCRIDGST 492
T +HLV N+GKM++LDKLL K K++ SRVLIFSQM+RLLDILEDY +RGY+YCRIDG+T
Sbjct: 473 TGDHLVTNAGKMVLLDKLLPKLKDRDSRVLIFSQMTRLLDILEDYLMYRGYQYCRIDGNT 532
Query: 493 SHDERVEAIDEYNKPNSEKFIFLLTTRAGGLGINLVTADTVVLYDSDWNPQADLQAMDRA 552
DER +I+ YNKP SEKF+FLL+TRAGGLGINL TAD V+LYDSDWNPQ DLQA DRA
Sbjct: 533 GGDERDASIEAYNKPGSEKFVFLLSTRAGGLGINLATADVVILYDSDWNPQVDLQAQDRA 592
Query: 553 HRIGQKKQVFVYRFVTENAIEEKVIERAAQKLRLDQLVIQQGTGKKTSALTNNKDDLIDM 612
HRIGQKK+V V+RF TENAIE KVIERA +KL LD LVIQQ G+ T NKD+L+ M
Sbjct: 593 HRIGQKKEVQVFRFCTENAIEAKVIERAYKKLALDALVIQQ--GRLAEQKTVNKDELLQM 650
Query: 613 IQFGARDMLQHGSGNITVDEDIDEILKKGERKTLELNAKYESLGLDDLQ-KFNGMADQSA 671
+++GA + IT DEDID I+ KGE T EL+AK + D +Q K + AD
Sbjct: 651 VRYGAEMVFSSKDSTIT-DEDIDRIIAKGEEATAELDAKMKKFTEDAIQFKMDDSAD--F 707
Query: 672 YEWNGTNFEKKKPDDHTV---DWINPPKRERRREQPLYSVDDYYREVIGNGKSKPSGSNT 728
Y+++ N ++ K D + +W +PPKRER+R YS +Y+++ + G
Sbjct: 708 YDFDDDNKDESKVDFKKIVSENWNDPPKRERKRN---YSEVEYFKQTLRQG--------- 755
Query: 729 PALKLPKQPKVIRMTYYQFAHPEFVRLQELEQLWYKKSVGYKITAYDVKEHAXXXXXXXX 788
A PK+P++ RM Q +F +Q L +L Y+K V Y + A+
Sbjct: 756 -APAKPKEPRIPRMP--QLHDFQFFNIQRLTEL-YEKEVRYLMQAH-------------- 797
Query: 789 XXXXXXXXXXXXXTNNAQKQEDDIDAKIAEEQAKIDAAEEFTDENLEQKQRFLEESFYN- 847
+ +D I+ EE + T E +E+K+ LEE+
Sbjct: 798 ---------------QKTQMKDTIEVDEPEE-----VGDPLTAEEVEEKELLLEEASQTI 837
Query: 848 ---WNKREFLAFISACIKFGRDNYVSISKAIHTKTPEEVQRYSETFWKRYKEVQGWEKYV 904
+R+F AFI AC K+GR++ SI+ + KT EEV+RY++ F RYKE+ +++ +
Sbjct: 838 RPYCGRRDFNAFIRACEKYGRNDIKSIASEMEGKTEEEVERYAQVFQVRYKELNDYDRII 897
Query: 905 ANIEAGEKK-TEKLKIQETIXXXXXXXXXXPLVELKILYPPNNTRRTYNSLEDIFLLVTV 963
NIE GE + + K +I + I P +ELKI Y N + YN D F++ V
Sbjct: 898 KNIERGEARISRKDEIMKAI-GKKLDRYRNPWLELKIQY-GQNKGKLYNEECDRFMICMV 955
Query: 964 GNLGLFASNLYERVKQEILKSPLFIFSWFIKTRTPLDISKRIATLLTLVQREH-EGVEHK 1022
LG ++ +K SPLF F WF+K+RT ++++R TL+ L+++E+ E E +
Sbjct: 956 HKLGY---GNWDELKAAFRTSPLFRFDWFVKSRTTQELARRCDTLIRLIEKENQEFDERE 1012
Query: 1023 RKRKTVTSADDQPNDSHNLNANVVSSPPSKRIHTDKQ 1059
R+ + S + + PS + KQ
Sbjct: 1013 RQARKEKKLSKSATPSKRPSGRQANESPSSLLKKRKQ 1049
>ECU10g1320 [K] KOG0385 Chromatin remodeling complex WSTF-ISWI small subunit
Length = 823
Score = 600 bits (1547), Expect = e-171
Identities = 363/885 (41%), Positives = 511/885 (57%), Gaps = 126/885 (14%)
Query: 127 SPSFIKEGKLRDYQVYGLNWLISLHESKLSGILADEMGLGKTLQSISFLGYLRYIKGIEG 186
SP F+ +LRDYQ+ GLNWLI++HE+ ++ ILADEMGLGKTLQ+I+FLGY+RY+K
Sbjct: 45 SPRFVLY-ELRDYQIEGLNWLINMHENSINCILADEMGLGKTLQTIAFLGYIRYVKKERK 103
Query: 187 PYIVIVPKSTLDNWQREFAKWTPEVKT-VILQGDKDFRKELIETKILTCNFDVLITSYEM 245
+++I+PKSTL NW+REF K+ P K V K+ R+E E I++ +D +T+YEM
Sbjct: 104 RHLIILPKSTLANWRREFRKFMPNYKVRVFYSSRKEMRREAEE--IMSSRWDACLTTYEM 161
Query: 246 VLKEKLTLKRFAWEYILIDEAHRIKNEQSALSQVIRLFYSKNRLLITGTPLQNNLHELWA 305
+ + L W YI+IDEAHRIKNE S LS+++R+F +RLLITGTPLQNN+HELWA
Sbjct: 162 CINARSILNTVKWSYIVIDEAHRIKNEHSLLSKIVRIFSCDHRLLITGTPLQNNVHELWA 221
Query: 306 LLNFLLPDVFGDSEVFDEWFQQNGKEEDQEVVVQQLHSVLQPFLLRRVKSEVEKSLLPKK 365
LLNF++P++F D+E F+ + N E D E + +++ SVLQ F LRR K +VE SL PKK
Sbjct: 222 LLNFIVPEIFNDAEKFESYVM-NIDEGDGEAI-RRIRSVLQLFFLRREKIDVEMSLPPKK 279
Query: 366 EINLYVGMTDMQIEWYKSLLEKDIDAVNGAVGKREGKTRLLNIVMQLRKCCNHPYLFEGA 425
+NLY ++ MQ EWY+ LL++D+ + R+ K L+N+VMQLRKCCNHPYLF A
Sbjct: 280 IVNLYSKLSPMQREWYRMLLKRDLSPLGST---RDPKGMLMNVVMQLRKCCNHPYLFPDA 336
Query: 426 EPGPPYTTDEHLVFNSGKMIVLDKLLKKKKEQGSRVLIFSQMSRLLDILEDYCYFRGYEY 485
EP PYT D+H++ NSGKMIVLDKLL K +GSRVLIFSQMS +LDILEDY FR YEY
Sbjct: 337 EP-KPYTNDKHIIENSGKMIVLDKLLASLKAKGSRVLIFSQMSMMLDILEDYAMFREYEY 395
Query: 486 CRIDGSTSHDERVEAIDEYNKPNSEKFIFLLTTRAGGLGINLVTADTVVLYDSDWNPQAD 545
CRIDGSTS+ +R EAID +N SEKF+FLLTTRAGGLGINL TADTV+L+DSDWNPQ D
Sbjct: 396 CRIDGSTSYRDRTEAIDGFNAEGSEKFLFLLTTRAGGLGINLSTADTVILFDSDWNPQMD 455
Query: 546 LQAMDRAHRIGQKKQVFVYRFVTENAIEEKVIERAAQKLRLDQLVIQQGTGKKTSALTNN 605
LQA DRAHRIGQKKQV V+R ++EN +EE+++ R+ QKL+LD +++Q G+ + + +
Sbjct: 456 LQAQDRAHRIGQKKQVVVFRLISENTVEERIVYRSLQKLKLDDILLQ---GRYHRSSSVS 512
Query: 606 KDDLIDMIQFGARDMLQHGSGNITVDEDIDEILKKGERKTLELNAKYESLGLDDLQKFNG 665
+ +LID++ G G DE I++++++GE KT E+N K + D N
Sbjct: 513 QSELIDILANGMEITEDEGK-----DESIEDVIRRGEEKTREMNVKLCDFKITDTLNTN- 566
Query: 666 MADQSAYEWNGTNFEKKKPDDHTVDWINPPKRERRREQPLYSVDDYYREVIGNGKSKPSG 725
Y W G +D+ V I I N +
Sbjct: 567 ---IDCYTWEG--------EDYNVKKIE--------------------SFIENSRDGHGR 595
Query: 726 SNTPALKLPKQPKVIRMTYYQFAHPEFVRLQELEQLWYKKSVGYKITAYDVKEHAXXXXX 785
S+ ++ +P++I YQF E LQE+
Sbjct: 596 SSRTSILFRARPRIIEYPEYQFYPKE---LQEI--------------------------- 625
Query: 786 XXXXXXXXXXXXXXXXTNNAQKQEDDIDAKIAEEQAKIDAAEEFTDENLEQKQRFLEESF 845
Q++E K+ EE + DE L +K+ L+
Sbjct: 626 --------------------QRKE----VKLYEEGKSLSQ-----DEVLRKKE--LQSQG 654
Query: 846 YNWNKREFLAFISACIKFGRDNYVSISKAIHTKTPEEVQRYSETFWKRYKEVQGWEKYVA 905
++W K++F +I A K GRD+ I A+ K ++V+ Y FW+R E+ EK +
Sbjct: 655 FDWTKKDFHLYIKAVEKVGRDDVEKI--AMLLKHKDDVEAYHRVFWERVNELSDAEKIIG 712
Query: 906 NIEAGEKKTE-KLKIQETIXXXXXXXXXXPLVELKILYPPNNTRRTYNSLEDIFLLVTVG 964
+I +++ E K +I+E I + L + YN LL+ +
Sbjct: 713 SINRSQRRMERKSRIREMIEGDLADIN-------RRLGKSRSKLGDYNG-----LLLGLY 760
Query: 965 NLGLFASNLYERVKQEILKSPLFIFSWFIKTRTPLDISKRIATLL 1009
L N E ++++IL+ + F +++ +RT DI K + L+
Sbjct: 761 RKYLDHPNWAECIRKDILRLSEYKFDYYLLSRTNTDIQKHVNHLI 805
>SPAC1783.05 [K] KOG0384 Chromodomain-helicase DNA-binding protein
Length = 1373
Score = 462 bits (1190), Expect = e-130
Identities = 259/611 (42%), Positives = 383/611 (62%), Gaps = 30/611 (4%)
Query: 126 QSPSFIKEGKLRDYQVYGLNWLISLHESKLSGILADEMGLGKTLQSISFLGYLRYIKGIE 185
+ PS+IK G++RD+Q+ G+NW+ L +GILADEMGLGKT+Q++ FL YL +
Sbjct: 380 KQPSYIKGGEIRDFQLTGINWMAYLWHRNENGILADEMGLGKTVQTVCFLSYLVHSLKQH 439
Query: 186 GPYIVIVPKSTLDNWQREFAKWTPEVKTVILQGDKDFRKELIE------TKILTCNFDVL 239
GP++++VP ST+ WQ A WTP++ ++ G+ + R + E T F++L
Sbjct: 440 GPFLIVVPLSTVPAWQETLANWTPDLNSICYTGNTESRANIREYEFYLSTNSRKLKFNIL 499
Query: 240 ITSYEMVLKEKLTLKRFAWEYILIDEAHRIKNEQSALSQVIRLFYSKNRLLITGTPLQNN 299
+T+YE +LK+K L W+Y+ IDEAHR+KN +S+L + + F + NRLLITGTPLQNN
Sbjct: 500 LTTYEYILKDKQELNNIRWQYLAIDEAHRLKNSESSLYETLSQFRTANRLLITGTPLQNN 559
Query: 300 LHELWALLNFLLPDVFGDSEVFDEWFQQNGKEEDQEVVVQQLHSVLQPFLLRRVKSEVEK 359
L EL +L+NFL+P F + + F Q E+++++ + L LQPF+LRR+K +VEK
Sbjct: 560 LKELASLVNFLMPGKFYIRDELN--FDQPNAEQERDI--RDLQERLQPFILRRLKKDVEK 615
Query: 360 SLLPKKEINLYVGMTDMQIEWYKSLLEKDIDAVNGAVGKREGKTRLLNIVMQLRKCCNHP 419
SL K E L V ++DMQ EWYK++L K+ A+ G R G+ LLNIV++L+K NHP
Sbjct: 616 SLPSKSERILRVELSDMQTEWYKNILTKNYRALTGHTDGR-GQLSLLNIVVELKKVSNHP 674
Query: 420 YLFEGAEP----GPPYTTDEHL---VFNSGKMIVLDKLLKKKKEQGSRVLIFSQMSRLLD 472
YLF GA G T ++ L + NSGKM++LDKLL++ K G RVLIFSQM R+L+
Sbjct: 675 YLFPGAAEKWMMGRKMTREDTLRGIIMNSGKMVLLDKLLQRLKHDGHRVLIFSQMVRMLN 734
Query: 473 ILEDYCYFRGYEYCRIDGSTSHDERVEAIDEYNKPNSEKFIFLLTTRAGGLGINLVTADT 532
IL +Y RGY Y R+DG+ R +ID +N P+S F+FLL+TRAGGLGINL TADT
Sbjct: 735 ILGEYMSLRGYNYQRLDGTIPASVRRVSIDHFNAPDSPDFVFLLSTRAGGLGINLNTADT 794
Query: 533 VVLYDSDWNPQADLQAMDRAHRIGQKKQVFVYRFVTENAIEEKVIERAAQKLRLDQLVIQ 592
V+++DSDWNPQADLQAM RAHRIGQK V VYRF++++ +EE ++ERA +K+ L+ +I
Sbjct: 795 VIIFDSDWNPQADLQAMARAHRIGQKNHVNVYRFLSKDTVEEDILERARRKMILEYAIIS 854
Query: 593 QGTGKKTSALTNNKDD---LIDMIQFGARDMLQHGSGNITVDE-DIDEILKKGERKTLEL 648
G +K+ N+K D L +++FGA +M + ++ ++D+IL E +
Sbjct: 855 LGVTEKSKNSKNDKYDAQELSAILKFGASNMFKATENQKKLENMNLDDILSHAEDRDSSN 914
Query: 649 NAKYESLGLDDLQKFNGMADQSAYEWNGTNF----EKKKPDDH----TVDWINPPKRERR 700
+ S+G ++ K + D A + N + E ++ ++ +RERR
Sbjct: 915 DVGGASMGGEEFLKQFEVTDYKAEDLNWDDIIPEEEMERIEEEERMLAAQRAKEEERERR 974
Query: 701 REQPLYSVDDY 711
E+ + +D+
Sbjct: 975 EEEERENDEDH 985
>Hs4557449 [K] KOG0384 Chromodomain-helicase DNA-binding protein
Length = 1739
Score = 456 bits (1174), Expect = e-128
Identities = 262/561 (46%), Positives = 362/561 (63%), Gaps = 29/561 (5%)
Query: 135 KLRDYQVYGLNWLISLHESKLSGILADEMGLGKTLQSISFLGYLRYIKGIEGPYIVIVPK 194
+LRDYQ+ GLNWL S ILADEMGLGKT+Q+ISFL YL + + GP++++VP
Sbjct: 483 ELRDYQLEGLNWLAHSWCKNNSVILADEMGLGKTIQTISFLSYLFHQHQLYGPFLIVVPL 542
Query: 195 STLDNWQREFAKWTPEVKTVILQGDKDFRK-----ELIETKILTCNFDVLITSYEMVLKE 249
STL +WQREF W PE+ V+ GD R E I ++ F+ LIT+YE++LK+
Sbjct: 543 STLTSWQREFEIWAPEINVVVYIGDLMSRNTIREYEWIHSQTKRLKFNALITTYEILLKD 602
Query: 250 KLTLKRFAWEYILIDEAHRIKNEQSALSQVIRLFYSKNRLLITGTPLQNNLHELWALLNF 309
K L W ++ +DEAHR+KN+ S L + + F S +RLLITGTPLQN+L ELW+LL+F
Sbjct: 603 KTVLGSINWAFLGVDEAHRLKNDDSLLYKTLIDFKSNHRLLITGTPLQNSLKELWSLLHF 662
Query: 310 LLPDVFGDSEVFDEWFQQNGKEEDQEVVVQQLHSVLQPFLLRRVKSEVEKSLLPKKEINL 369
++P+ F E ++++ + +GK +E Q LH VL+PFLLRRVK +VEKSL K E L
Sbjct: 663 IMPEKF---EFWEDFEEDHGK--GRENGYQSLHKVLEPFLLRRVKKDVEKSLPAKVEQIL 717
Query: 370 YVGMTDMQIEWYKSLLEKDIDAVNGAVGKREGKTRLLNIVMQLRKCCNHPYLFEGAEPGP 429
V M+ +Q ++YK +L ++ A+ A G R + LNIVM+L+KCCNH YL + E
Sbjct: 718 RVEMSALQKQYYKWILTRNYKAL--AKGTRGSTSGFLNIVMELKKCCNHCYLIKPPEENE 775
Query: 430 PYTTDE---HLVFNSGKMIVLDKLLKKKKEQGSRVLIFSQMSRLLDILEDYCYFRGYEYC 486
E L+ +SGK+I+LDKLL + +E+G+RVLIFSQM R+LDIL +Y + Y +
Sbjct: 776 RENGQEILLSLIRSSGKLILLDKLLTRLRERGNRVLIFSQMVRMLDILAEYLTIKHYPFQ 835
Query: 487 RIDGSTSHDERVEAIDEYNKPNSEKFIFLLTTRAGGLGINLVTADTVVLYDSDWNPQADL 546
R+DGS + R +A+D +N SE F FLL+TRAGGLGINL +ADTVV++DSDWNPQ DL
Sbjct: 836 RLDGSIKGEIRKQALDHFNADGSEDFCFLLSTRAGGLGINLASADTVVIFDSDWNPQNDL 895
Query: 547 QAMDRAHRIGQKKQVFVYRFVTENAIEEKVIERAAQKLRLDQLVIQQGTGKKTSALTN-- 604
QA RAHRIGQKKQV +YR VT+ +EE++IERA +K+ LD LVIQ+ + L N
Sbjct: 896 QAQARAHRIGQKKQVNIYRLVTKGTVEEEIIERAKKKMVLDHLVIQRMDTTGRTILENNS 955
Query: 605 --------NKDDLIDMIQFGARDMLQ--HGSGNITVDEDIDEILKKGERKTLEL--NAKY 652
NK++L +++FGA D+ + G + + DIDEIL+ E + E+ +A
Sbjct: 956 GRSNSNPFNKEELTAILKFGAEDLFKELEGEESEPQEMDIDEILRLAETRENEVSTSATD 1015
Query: 653 ESLGLDDLQKFNGMADQSAYE 673
E L + F M D+ E
Sbjct: 1016 ELLSQFKVANFATMEDEEELE 1036
>At2g13370 [K] KOG0384 Chromodomain-helicase DNA-binding protein
Length = 1738
Score = 454 bits (1169), Expect = e-127
Identities = 252/573 (43%), Positives = 374/573 (64%), Gaps = 32/573 (5%)
Query: 126 QSPSFIKEGKLRDYQVYGLNWLISLHESKLSGILADEMGLGKTLQSISFLGYLRYIKGIE 185
+ P ++ G LRDYQ+ GLN+L++ + + ILADEMGLGKT+QS+S LG+L+ + I
Sbjct: 631 EQPEWLIGGTLRDYQLEGLNFLVNSWLNDTNVILADEMGLGKTVQSVSMLGFLQNTQQIP 690
Query: 186 GPYIVIVPKSTLDNWQREFAKWTPEVKTVILQGDKDFRKELIETKIL-----TCNFDVLI 240
GP++V+VP STL NW +EF KW P + ++ G + R+ +T + F+ L+
Sbjct: 691 GPFLVVVPLSTLANWAKEFRKWLPGMNIIVYVGTRASREVRNKTNDVHKVGRPIKFNALL 750
Query: 241 TSYEMVLKEKLTLKRFAWEYILIDEAHRIKNEQSALSQVIRLFYSKNRLLITGTPLQNNL 300
T+YE+VLK+K L + W Y+++DEAHR+KN ++ L + F +KN+LLITGTPLQN++
Sbjct: 751 TTYEVVLKDKAVLSKIKWIYLMVDEAHRLKNSEAQLYTALLEFSTKNKLLITGTPLQNSV 810
Query: 301 HELWALLNFLLPDVFGDSEVFDEWFQQNGKEEDQEVVVQQLHSVLQPFLLRRVKSEVEKS 360
ELWALL+FL P F + + F E ++ + E+ LH L+P +LRRV +VEKS
Sbjct: 811 EELWALLHFLDPGKFKNKDEFVENYKNLSSFNESELA--NLHLELRPHILRRVIKDVEKS 868
Query: 361 LLPKKEINLYVGMTDMQIEWYKSLLEKDIDAVNGAVGKREGKTRLLNIVMQLRKCCNHPY 420
L PK E L V M+ +Q ++YK +LE++ +N V R + LLNIV++L+KCCNHP+
Sbjct: 869 LPPKIERILRVEMSPLQKQYYKWILERNFHDLNKGV--RGNQVSLLNIVVELKKCCNHPF 926
Query: 421 LFEGAEPGPPYTTD-------EHLVFNSGKMIVLDKLLKKKKEQGSRVLIFSQMSRLLDI 473
LFE A+ G Y D + ++ +SGK+++LDKLL + +E RVLIFSQM R+LDI
Sbjct: 927 LFESADHG--YGGDINDNSKLDKIILSSGKLVILDKLLVRLRETKHRVLIFSQMVRMLDI 984
Query: 474 LEDYCYFRGYEYCRIDGSTSHDERVEAIDEYNKPNSEKFIFLLTTRAGGLGINLVTADTV 533
L +Y RG+++ R+DGST + R +A+D +N P S+ F FLL+TRAGGLGINL TADTV
Sbjct: 985 LAEYLSLRGFQFQRLDGSTKAELRQQAMDHFNAPASDDFCFLLSTRAGGLGINLATADTV 1044
Query: 534 VLYDSDWNPQADLQAMDRAHRIGQKKQVFVYRFVTENAIEEKVIERAAQKLRLDQLVIQQ 593
V++DSDWNPQ DLQAM RAHRIGQ++ V +YRFVT ++EE+++ERA +K+ LD LVIQ+
Sbjct: 1045 VIFDSDWNPQNDLQAMSRAHRIGQQEVVNIYRFVTSKSVEEEILERAKRKMVLDHLVIQK 1104
Query: 594 GTG------KKTSALTN-NKDDLIDMIQFGARDMLQHG-----SGNITVDEDIDEILKKG 641
++T +N +K++L +++FGA ++ + S + DIDEIL++
Sbjct: 1105 LNAEGRLEKRETKKGSNFDKNELSAILRFGAEELFKEDKNDEESKKRLLSMDIDEILERA 1164
Query: 642 ER--KTLELNAKYESLGLDDLQKFNGMADQSAY 672
E+ + ++E LG + F D ++
Sbjct: 1165 EQVEEKHTDETEHELLGAFKVANFCNAEDDGSF 1197
>At5g19310 [BK] KOG0386 Chromatin remodeling complex SWI/SNF component SWI2
and related ATPases (DNA/RNA helicase superfamily)
Length = 1041
Score = 453 bits (1165), Expect = e-127
Identities = 241/591 (40%), Positives = 366/591 (61%), Gaps = 20/591 (3%)
Query: 126 QSPSFIKEGKLRDYQVYGLNWLISLHESKLSGILADEMGLGKTLQSISFLGYLRYIKGIE 185
+ PS ++ G+LR YQ+ GL W++SL+ + +GILADEMGLGKT+Q+I+ + YL K +
Sbjct: 353 KQPSLLQGGELRSYQLEGLQWMVSLYNNDYNGILADEMGLGKTIQTIALIAYLLESKDLH 412
Query: 186 GPYIVIVPKSTLDNWQREFAKWTPEVKTVILQGDKDFRKELIETKILTCNFDVLITSYEM 245
GP++++ PK+ L NW+ EFA W P + + G K+ R E I +I F+VLIT Y++
Sbjct: 413 GPHLILAPKAVLPNWENEFALWAPSISAFLYDGSKEKRTE-IRARIAGGKFNVLITHYDL 471
Query: 246 VLKEKLTLKRFAWEYILIDEAHRIKNEQSALSQVIRLFYS-KNRLLITGTPLQNNLHELW 304
++++K LK+ W Y+++DE HR+KN + AL++ + Y K RLL+TGTP+QN+L ELW
Sbjct: 472 IMRDKAFLKKIDWNYMIVDEGHRLKNHECALAKTLGTGYRIKRRLLLTGTPIQNSLQELW 531
Query: 305 ALLNFLLPDVFGDSEVFDEWFQQNGKE--------EDQEVVVQQLHSVLQPFLLRRVKSE 356
+LLNFLLP +F F+EWF E E++ +++ +LH V++PFLLRR KSE
Sbjct: 532 SLLNFLLPHIFNSIHNFEEWFNTPFAECGSASLTDEEELLIINRLHHVIRPFLLRRKKSE 591
Query: 357 VEKSLLPKKEINLYVGMTDMQIEWYKSLLEKDIDAVNGAVGKREGKTRLLNIVMQLRKCC 416
VEK L K ++ L M+ Q +YK + + ++ GK + L N+ MQLRKCC
Sbjct: 592 VEKFLPGKTQVILKCDMSAWQKLYYKQVTDVGRVGLHSGNGKSKS---LQNLTMQLRKCC 648
Query: 417 NHPYLFEGAEPGPPYTTDEHLVFNSGKMIVLDKLLKKKKEQGSRVLIFSQMSRLLDILED 476
NHPYLF GA+ +V SGK +LD+LL K K+ G R+L+FSQM+RL+D+LE
Sbjct: 649 NHPYLFVGADYN--MCKKPEIVRASGKFELLDRLLPKLKKAGHRILLFSQMTRLIDLLEI 706
Query: 477 YCYFRGYEYCRIDGSTSHDERVEAIDEYNKPNSEKFIFLLTTRAGGLGINLVTADTVVLY 536
Y Y Y R+DGST D+R + ++N+P+S F+FLL+TRAGGLG+NL TADT++++
Sbjct: 707 YLSLNDYMYLRLDGSTKTDQRGILLKQFNEPDSPYFMFLLSTRAGGLGLNLQTADTIIIF 766
Query: 537 DSDWNPQADLQAMDRAHRIGQKKQVFVYRFVTENAIEEKVIERAAQKLRLDQLVIQQGTG 596
DSDWNPQ D QA DRAHRIGQKK+V V+ V+ +IEE ++ERA QK+ +D VIQ G
Sbjct: 767 DSDWNPQMDQQAEDRAHRIGQKKEVRVFVLVSIGSIEEVILERAKQKMGIDAKVIQAGLF 826
Query: 597 KKTSALTNNKDDLIDMIQFGARDMLQHGSGNITVDEDIDEILKKGERKTLELNAKYESLG 656
TS + ++ L +++ G + ++ + +I+ + + E + E
Sbjct: 827 NTTSTAQDRREMLEEIMSKGTSSL----GEDVPSEREINRLAARTEEEFWMFEQMDEERR 882
Query: 657 LDDLQKFNGMADQSAYEWNGTNFEKKKPDDHTVDWINPPKRERRREQPLYS 707
+ K M ++ EW T+ E ++ + + +R+R++ +YS
Sbjct: 883 KKENYKTRLMEEKEVPEWAYTS-ETQEDKTNAKNHFGSLTGKRKRKEAVYS 932
>At3g06010 [BK] KOG0386 Chromatin remodeling complex SWI/SNF component SWI2 and
related ATPases (DNA/RNA helicase superfamily)
Length = 1132
Score = 452 bits (1163), Expect = e-126
Identities = 239/591 (40%), Positives = 367/591 (61%), Gaps = 18/591 (3%)
Query: 126 QSPSFIKEGKLRDYQVYGLNWLISLHESKLSGILADEMGLGKTLQSISFLGYLRYIKGIE 185
+ PS ++ G+LR YQ+ GL W++SL + L+GILADEMGLGKT+Q+IS + YL KG+
Sbjct: 423 EQPSLLEGGELRSYQLEGLQWMVSLFNNNLNGILADEMGLGKTIQTISLIAYLLENKGVP 482
Query: 186 GPYIVIVPKSTLDNWQREFAKWTPEVKTVILQGDKDFRKELIETKILTCNFDVLITSYEM 245
GPY+++ PK+ L NW EFA W P + + G + RK + E F+VLIT Y++
Sbjct: 483 GPYLIVAPKAVLPNWVNEFATWVPSIAAFLYDGRLEERKAIREKIAGEGKFNVLITHYDL 542
Query: 246 VLKEKLTLKRFAWEYILIDEAHRIKNEQSALSQVIRLFYS-KNRLLITGTPLQNNLHELW 304
++++K LK+ W Y+++DE HR+KN +SAL++ + Y K RLL+TGTP+QN+L ELW
Sbjct: 543 IMRDKAFLKKIEWYYMIVDEGHRLKNHESALAKTLLTGYRIKRRLLLTGTPIQNSLQELW 602
Query: 305 ALLNFLLPDVFGDSEVFDEWFQQ--------NGKEEDQEVVVQQLHSVLQPFLLRRVKSE 356
+LLNFLLP +F + F+EWF + +E++ +++ +LH V++PF+LRR K E
Sbjct: 603 SLLNFLLPHIFNSVQNFEEWFNAPFADRGNVSLTDEEELLIIHRLHHVIRPFILRRKKDE 662
Query: 357 VEKSLLPKKEINLYVGMTDMQIEWYKSLLEKDIDAVNGAVGKREGKTRLLNIVMQLRKCC 416
VEK L K ++ L M+ Q +YK + D+ V G + K+ L N+ MQLRKCC
Sbjct: 663 VEKFLPGKTQVILKCDMSAWQKVYYKQVT--DMGRVGLQTGSGKSKS-LQNLTMQLRKCC 719
Query: 417 NHPYLFEGAEPGPPYTTDEHLVFNSGKMIVLDKLLKKKKEQGSRVLIFSQMSRLLDILED 476
NHPYLF G + +V SGK +LD+LL K ++ G R+L+FSQM+RL+D+LE
Sbjct: 720 NHPYLFVGGDYN--MWKKPEIVRASGKFELLDRLLPKLRKAGHRILLFSQMTRLIDVLEI 777
Query: 477 YCYFRGYEYCRIDGSTSHDERVEAIDEYNKPNSEKFIFLLTTRAGGLGINLVTADTVVLY 536
Y Y+Y R+DG+T D+R + ++N+P+S F+FLL+TRAGGLG+NL TADTV+++
Sbjct: 778 YLTLNDYKYLRLDGTTKTDQRGLLLKQFNEPDSPYFMFLLSTRAGGLGLNLQTADTVIIF 837
Query: 537 DSDWNPQADLQAMDRAHRIGQKKQVFVYRFVTENAIEEKVIERAAQKLRLDQLVIQQGTG 596
DSDWNPQ D QA DRAHRIGQKK+V V+ V+ ++EE ++ERA QK+ +D VIQ G
Sbjct: 838 DSDWNPQMDQQAEDRAHRIGQKKEVRVFVLVSVGSVEEVILERAKQKMGIDAKVIQAGLF 897
Query: 597 KKTSALTNNKDDLIDMIQFGARDMLQHGSGNITVDEDIDEILKKGERKTLELNAKYESLG 656
TS + ++ L ++++ G + ++ + +I+ + + E + E
Sbjct: 898 NTTSTAQDRREMLEEIMRKGTSSL----GTDVPSEREINRLAARSEDEFWMFERMDEERR 953
Query: 657 LDDLQKFNGMADQSAYEWNGTNFEKKKPDDHTVDWINPPKRERRREQPLYS 707
+ + M +Q EW T +++ ++ +R+R++ +YS
Sbjct: 954 RKENYRARLMQEQEVPEWAYTTQTQEEKLNNGKFHFGSVTGKRKRKEIVYS 1004
>Hs4557447 [K] KOG0384 Chromodomain-helicase DNA-binding protein
Length = 1709
Score = 450 bits (1158), Expect = e-126
Identities = 280/653 (42%), Positives = 405/653 (61%), Gaps = 50/653 (7%)
Query: 126 QSPSFI--KEG-KLRDYQVYGLNWLISLHESKLSGILADEMGLGKTLQSISFLGYLRYIK 182
+ PS+I EG +LRDYQ+ GLNWL S ILADEMGLGKT+Q+ISFL YL +
Sbjct: 468 KQPSYIGGHEGLELRDYQLNGLNWLAHSWCKGNSCILADEMGLGKTIQTISFLNYLFHEH 527
Query: 183 GIEGPYIVIVPKSTLDNWQREFAKWTPEVKTVILQGDKDFRKELIETKILT------CNF 236
+ GP++++VP STL +WQRE W ++ V+ GD + R +I T T F
Sbjct: 528 QLYGPFLLVVPLSTLTSWQREIQTWASQMNAVVYLGDINSRN-MIRTHEWTHHQTKRLKF 586
Query: 237 DVLITSYEMVLKEKLTLKRFAWEYILIDEAHRIKNEQSALSQVIRLFYSKNRLLITGTPL 296
++L+T+YE++LK+K L W +I +DEAHR+KN+ S L + + F S +RLLITGTPL
Sbjct: 587 NILLTTYEILLKDKAFLGGLNWAFIGVDEAHRLKNDDSLLYKTLIDFKSNHRLLITGTPL 646
Query: 297 QNNLHELWALLNFLLPDVFGDSEVFDEWFQQNGKEEDQEVVVQQLHSVLQPFLLRRVKSE 356
QN+L ELW+LL+F++P+ F E F+E ++GK +E LH L+PFLLRRVK +
Sbjct: 647 QNSLKELWSLLHFIMPEKFSSWEDFEE---EHGK--GREYGYASLHKELEPFLLRRVKKD 701
Query: 357 VEKSLLPKKEINLYVGMTDMQIEWYKSLLEKDIDAVN-GAVGKREGKTRLLNIVMQLRKC 415
VEKSL K E L + M+ +Q ++YK +L ++ A++ G+ G G LNI+M+L+KC
Sbjct: 702 VEKSLPAKVEQILRMEMSALQKQYYKWILTRNYKALSKGSKGSTSG---FLNIMMELKKC 758
Query: 416 CNHPYLFEGAEPGPPYTTDE---HLVFNSGKMIVLDKLLKKKKEQGSRVLIFSQMSRLLD 472
CNH YL + + Y E HL+ +SGK+I+LDKLL + +E+G+RVLIFSQM R+LD
Sbjct: 759 CNHCYLIKPPDNNEFYNKQEALQHLIRSSGKLILLDKLLIRLRERGNRVLIFSQMVRMLD 818
Query: 473 ILEDYCYFRGYEYCRIDGSTSHDERVEAIDEYNKPNSEKFIFLLTTRAGGLGINLVTADT 532
IL +Y +R + + R+DGS + R +A+D +N SE F FLL+TRAGGLGINL +ADT
Sbjct: 819 ILAEYLKYRQFPFQRLDGSIKGELRKQALDHFNAEGSEDFCFLLSTRAGGLGINLASADT 878
Query: 533 VVLYDSDWNPQADLQAMDRAHRIGQKKQVFVYRFVTENAIEEKVIERAAQKLRLDQLVIQ 592
VV++DSDWNPQ DLQA RAHRIGQKKQV +YR VT+ ++EE ++ERA +K+ LD LVIQ
Sbjct: 879 VVIFDSDWNPQNDLQAQARAHRIGQKKQVNIYRLVTKGSVEEDILERAKKKMVLDHLVIQ 938
Query: 593 Q--GTGK--------KTSALTNNKDDLIDMIQFGARDMLQHGSGNITVDE--DIDEILKK 640
+ TGK +S+ NK++L +++FGA ++ + G + DIDEILK+
Sbjct: 939 RMDTTGKTVLHTGSAPSSSTPFNKEELSAILKFGAEELFKEPEGEEQEPQEMDIDEILKR 998
Query: 641 GERKTLE---LNAKYESLGLDDLQKFNGMADQSAY---EWNGTNFEKKKPDDHTVDWINP 694
E E L E L + F+ M + E N N+E+ P+D +
Sbjct: 999 AETHENEPGPLTVGDELLSQFKVANFSNMDEDDIELEPERNSKNWEEIIPEDQR-RRLEE 1057
Query: 695 PKRERRREQ--PLYSVDDYYREVIGNGKS-------KPSGSNTPALKLPKQPK 738
+R++ E+ L + + +++ NG + SGS++ ++ K+PK
Sbjct: 1058 EERQKELEEIYMLPRMRNCAKQISFNGSEGRRSRSRRYSGSDSDSISEGKRPK 1110
>SPAC3G6.01 [K] KOG0384 Chromodomain-helicase DNA-binding protein
Length = 1388
Score = 448 bits (1152), Expect = e-125
Identities = 262/639 (41%), Positives = 382/639 (59%), Gaps = 43/639 (6%)
Query: 126 QSPSFIKEGKLRDYQVYGLNWLISLHESKLSGILADEMGLGKTLQSISFLGYLRYIKGIE 185
Q PS+I G+LRD+Q+ G+NW+ L +GILADEMGLGKT+Q+++FL YL +
Sbjct: 365 QQPSYITGGELRDFQLTGVNWMAYLWHKNENGILADEMGLGKTVQTVAFLSYLAHSLRQH 424
Query: 186 GPYIVIVPKSTLDNWQREFAKWTPEVKTVILQGDKDFRKELIETKILT-----CNFDVLI 240
GP++V+VP ST+ WQ A W ++ + G+ R+ + + + F++L+
Sbjct: 425 GPFLVVVPLSTVPAWQETLALWASDMNCISYLGNTTSRQVIRDYEFYVDGTQKIKFNLLL 484
Query: 241 TSYEMVLKEKLTLKRFAWEYILIDEAHRIKNEQSALSQVIRLFYSKNRLLITGTPLQNNL 300
T+YE VLK++ L W+Y+ IDEAHR+KN +S+L + + F + NRLLITGTPLQNN+
Sbjct: 485 TTYEYVLKDRSVLSNIKWQYMAIDEAHRLKNSESSLYEALSQFKNSNRLLITGTPLQNNI 544
Query: 301 HELWALLNFLLPDVFGDSEVFDEWFQQNGKEEDQEVVVQQLHSVLQPFLLRRVKSEVEKS 360
EL AL++FL+P F E+ +E +E+QE ++ L LQP++LRR+K +VEKS
Sbjct: 545 RELAALVDFLMPGKF---EIREE-INLEAPDEEQEAYIRSLQEHLQPYILRRLKKDVEKS 600
Query: 361 LLPKKEINLYVGMTDMQIEWYKSLLEKDIDAVNGAVGKREGKTRLLNIVMQLRKCCNHPY 420
L K E L V ++D+Q+ WYK++L ++ + ++ + LLNIV++L+K NHPY
Sbjct: 601 LPSKSERILRVELSDLQMYWYKNILTRNYRVLTQSISSGS-QISLLNIVVELKKASNHPY 659
Query: 421 LFEGAEP---------GPPYTTDEHLVFNSGKMIVLDKLLKKKKEQGSRVLIFSQMSRLL 471
LF+G E G + L+ NSGKM++LDKLL + + G RVLIFSQM R+L
Sbjct: 660 LFDGVEESWMQKINSQGRRDEVLKGLIMNSGKMVLLDKLLSRLRRDGHRVLIFSQMVRML 719
Query: 472 DILEDYCYFRGYEYCRIDGSTSHDERVEAIDEYNKPNSEKFIFLLTTRAGGLGINLVTAD 531
DIL DY RGY + R+DG+ R +ID +N PNS F+FLL+TRAGGLGINL+TAD
Sbjct: 720 DILGDYLSLRGYPHQRLDGTVPAAVRRTSIDHFNAPNSPDFVFLLSTRAGGLGINLMTAD 779
Query: 532 TVVLYDSDWNPQADLQAMDRAHRIGQKKQVFVYRFVTENAIEEKVIERAAQKLRLDQLVI 591
TV+++DSDWNPQADLQAM RAHRIGQK V VYR ++++ IEE V+ERA +K+ L+ +I
Sbjct: 780 TVIIFDSDWNPQADLQAMARAHRIGQKNHVMVYRLLSKDTIEEDVLERARRKMILEYAII 839
Query: 592 QQGTGKKTSALTNNK---DDLIDMIQFGARDMLQHGSGNITV-DEDIDEILKKGERKTLE 647
G K N+K ++L +++FGA +M + + + D ++DEIL+ E
Sbjct: 840 SLGVTDKQKNSKNDKFSAEELSAILKFGASNMFKAENNQKKLEDMNLDEILEHAEDHDTS 899
Query: 648 LNAKYESLGLDDLQKFNGMADQSA-YEWNG----TNFEKKKPDDHTVDWINPPKRE---- 698
+ S+G ++ K + D A W+ T EK + +D + K+E
Sbjct: 900 NDVGGASMGGEEFLKQFEVTDYKADVSWDDIIPLTEREKFEEEDRLREEEEALKQEIELS 959
Query: 699 -RRREQPLYSVDDYYREVIGNGKSKPSGSNTPALKLPKQ 736
RR +P S + PS S T K KQ
Sbjct: 960 SRRGNRPYPS----------SAVESPSYSGTSERKSKKQ 988
>YOR290c [BK] KOG0386 Chromatin remodeling complex SWI/SNF component SWI2 and
related ATPases (DNA/RNA helicase superfamily)
Length = 1703
Score = 444 bits (1142), Expect = e-124
Identities = 269/688 (39%), Positives = 390/688 (56%), Gaps = 48/688 (6%)
Query: 6 SNNQHDEKYWSERRSKFLLDVDPKIAKQRNKEDTYI---------RFKHLLQITDLFRHF 56
+N + DE+ +E+++K L A + N E+ YI R HLL+ T+ F
Sbjct: 638 TNLERDEQKRAEKKAKERLQ-----ALKANDEEAYIKLLDQTKDTRITHLLRQTNAFLDS 692
Query: 57 IGIRAKYDKNMQKLLKT-IDAENKVAGTLKEPAGHLARAPRHYRKXXXXXXXXXXXXXXX 115
+ + K+ QK K ID+ K A E L+ P+ +
Sbjct: 693 L---TRAVKDQQKYTKEMIDSHIKEAS---EEVDDLSMVPKMKDEEYDDDDDNSNVDYYN 746
Query: 116 XXXXXXXXXXQSPSFIKEGKLRDYQVYGLNWLISLHESKLSGILADEMGLGKTLQSISFL 175
+ PS + G L+DYQ+ GL W++SL + L+GILADEMGLGKT+Q+IS L
Sbjct: 747 VAHRIKEDIKKQPSILVGGTLKDYQIKGLQWMVSLFNNHLNGILADEMGLGKTIQTISLL 806
Query: 176 GYLRYIKGIEGPYIVIVPKSTLDNWQREFAKWTPEVKTVILQGDKDFRKELIETKILTCN 235
YL +K I GPY+VIVP STL NW EFAKW P ++T+ +G + RK + KI
Sbjct: 807 TYLYEMKNIRGPYLVIVPLSTLSNWSSEFAKWAPTLRTISFKGSPNERKAK-QAKIRAGE 865
Query: 236 FDVLITSYEMVLKEKLTLKRFAWEYILIDEAHRIKNEQSALSQVIRLFYSKN-RLLITGT 294
FDV++T++E ++KE+ L + W +++IDE HR+KN QS LS + Y + RL++TGT
Sbjct: 866 FDVVLTTFEYIIKERALLSKVKWVHMIIDEGHRMKNAQSKLSLTLNTHYHADYRLILTGT 925
Query: 295 PLQNNLHELWALLNFLLPDVFGDSEVFDEWFQQ-----------NGKEEDQEVVVQQLHS 343
PLQNNL ELWALLNF+LP +F + FDEWF EE+ +V+++LH
Sbjct: 926 PLQNNLPELWALLNFVLPKIFNSVKSFDEWFNTPFANTGGQDKIELSEEETLLVIRRLHK 985
Query: 344 VLQPFLLRRVKSEVEKSLLPKKEINLYVGMTDMQIEWYKSLLEKDIDAVNGAVGKRE-GK 402
VL+PFLLRR+K +VEK L K E + M+ +Q Y+ +L+ + K+ G
Sbjct: 986 VLRPFLLRRLKKDVEKELPDKVEKVVKCKMSALQQIMYQQMLKYRRLFIGDQNNKKMVGL 1045
Query: 403 TRLLNIVMQLRKCCNHPYLFEGAEP--GPPYTTDEHLVFNSGKMIVLDKLLKKKKEQGSR 460
N +MQL+K CNHP++FE E P T++ + +GK +LD++L K K G R
Sbjct: 1046 RGFNNQIMQLKKICNHPFVFEEVEDQINPTRETNDDIWRVAGKFELLDRILPKLKATGHR 1105
Query: 461 VLIFSQMSRLLDILEDYCYFRGYEYCRIDGSTSHDERVEAIDEYNKPNSEKFIFLLTTRA 520
VLIF QM++++DI+ED+ + +Y R+DG T DER E + +N P+SE F+L+TRA
Sbjct: 1106 VLIFFQMTQIMDIMEDFLRYINIKYLRLDGHTKSDERSELLRLFNAPDSEYLCFILSTRA 1165
Query: 521 GGLGINLVTADTVVLYDSDWNPQADLQAMDRAHRIGQKKQVFVYRFVTENAIEEKVIERA 580
GGLG+NL TADTV+++D+DWNP DLQA DRAHRIGQK +V + R +T N++EE ++ERA
Sbjct: 1166 GGLGLNLQTADTVIIFDTDWNPHQDLQAQDRAHRIGQKNEVRILRLITTNSVEEVILERA 1225
Query: 581 AQKLRLDQLVIQQGTGKKTSALTNNKDDLIDMIQFGARDMLQHGSG----NITVDEDIDE 636
+KL +D VIQ G S + L ++ + SG D +I+E
Sbjct: 1226 YKKLDIDGKVIQAGKFDNKSTSEEQEALLRSLLDAEEERRKKRESGVEEEEELKDSEINE 1285
Query: 637 ILKKGERKTLEL-------NAKYESLGL 657
IL + + + L + K E LG+
Sbjct: 1286 ILARNDEEMAVLTRMDEDRSKKEEELGV 1313
>YER164w [K] KOG0384 Chromodomain-helicase DNA-binding protein
Length = 1468
Score = 443 bits (1140), Expect = e-124
Identities = 243/572 (42%), Positives = 359/572 (62%), Gaps = 30/572 (5%)
Query: 128 PSFIKEGKLRDYQVYGLNWLISLHESKLSGILADEMGLGKTLQSISFLGYLRYIKGIEGP 187
P FIK G+LRD+Q+ G+NW+ L +GILADEMGLGKT+Q+++F+ +L + + GP
Sbjct: 368 PPFIKGGELRDFQLTGINWMAFLWSKGDNGILADEMGLGKTVQTVAFISWLIFARRQNGP 427
Query: 188 YIVIVPKSTLDNWQREFAKWTPEVKTVILQGDKDFRKELIETKILT---------CNFDV 238
+I++VP ST+ W F KW P++ + G++ R + E + T F+V
Sbjct: 428 HIIVVPLSTMPAWLDTFEKWAPDLNCICYMGNQKSRDTIREYEFYTNPRAKGKKTMKFNV 487
Query: 239 LITSYEMVLKEKLTLKRFAWEYILIDEAHRIKNEQSALSQVIRLFYSKNRLLITGTPLQN 298
L+T+YE +LK++ L W+++ +DEAHR+KN +S+L + + F NR+LITGTPLQN
Sbjct: 488 LLTTYEYILKDRAELGSIKWQFMAVDEAHRLKNAESSLYESLNSFKVANRMLITGTPLQN 547
Query: 299 NLHELWALLNFLLPDVFGDSEVFDEWFQQNGKEEDQEVVVQQLHSVLQPFLLRRVKSEVE 358
N+ EL AL+NFL+P F D+ ++E+QE + LH +QPF+LRR+K +VE
Sbjct: 548 NIKELAALVNFLMPGRF----TIDQEIDFENQDEEQEEYIHDLHRRIQPFILRRLKKDVE 603
Query: 359 KSLLPKKEINLYVGMTDMQIEWYKSLLEKDIDAVNGAVGKREGKTRLLNIVMQLRKCCNH 418
KSL K E L V ++D+Q E+YK++L K+ A+ G + G LLNI+ +L+K NH
Sbjct: 604 KSLPSKTERILRVELSDVQTEYYKNILTKNYSALTA--GAKGGHFSLLNIMNELKKASNH 661
Query: 419 PYLFEGAEP------GPPYTTDEH----LVFNSGKMIVLDKLLKKKKEQGSRVLIFSQMS 468
PYLF+ AE G T E+ L+ +SGKM++LD+LL + K+ G RVLIFSQM
Sbjct: 662 PYLFDNAEERVLQKFGDGKMTRENVLRGLIMSSGKMVLLDQLLTRLKKDGHRVLIFSQMV 721
Query: 469 RLLDILEDYCYFRGYEYCRIDGSTSHDERVEAIDEYNKPNSEKFIFLLTTRAGGLGINLV 528
R+LDIL DY +G + R+DG+ +R +ID +N P+S F+FLL+TRAGGLGINL+
Sbjct: 722 RMLDILGDYLSIKGINFQRLDGTVPSAQRRISIDHFNSPDSNDFVFLLSTRAGGLGINLM 781
Query: 529 TADTVVLYDSDWNPQADLQAMDRAHRIGQKKQVFVYRFVTENAIEEKVIERAAQKLRLDQ 588
TADTVV++DSDWNPQADLQAM RAHRIGQK V VYR V+++ +EE+V+ERA +K+ L+
Sbjct: 782 TADTVVIFDSDWNPQADLQAMARAHRIGQKNHVMVYRLVSKDTVEEEVLERARKKMILEY 841
Query: 589 LVIQQGT---GKKTSALTNNKDDLIDMIQFGARDMLQHGSGNITVDE-DIDEILKKGERK 644
+I G K T N +L +++FGA +M +++ ++D++L E
Sbjct: 842 AIISLGVTDGNKYTKKNEPNAGELSAILKFGAGNMFTATDNQKKLEDLNLDDVLNHAEDH 901
Query: 645 TLELNAKYESLGLDDLQKFNGMADQSA-YEWN 675
+ LG ++ K + D A +W+
Sbjct: 902 VTTPDLGESHLGGEEFLKQFEVTDYKADIDWD 933
>SPAC1250.01 [BK] KOG0386 Chromatin remodeling complex SWI/SNF component SWI2
and related ATPases (DNA/RNA helicase superfamily)
Length = 1199
Score = 442 bits (1138), Expect = e-123
Identities = 253/608 (41%), Positives = 368/608 (59%), Gaps = 35/608 (5%)
Query: 126 QSPSFIKEGKLRDYQVYGLNWLISLHESKLSGILADEMGLGKTLQSISFLGYLRYIKGIE 185
+ PS + GKL++YQ+ GL W+ISL+ + L+GILADEMGLGKT+Q+IS + +L K
Sbjct: 407 EQPSILVGGKLKEYQLRGLQWMISLYNNHLNGILADEMGLGKTIQTISLITHLIEKKRQN 466
Query: 186 GPYIVIVPKSTLDNWQREFAKWTPEVKTVILQGDKDFRKELIETKILTCNFDVLITSYEM 245
GP++VIVP STL NW EF +W P + ++ +G RK L ++ NF VL+T+YE
Sbjct: 467 GPFLVIVPLSTLTNWTMEFERWAPSIVKIVYKGPPQVRKAL-HPQVRHSNFQVLLTTYEY 525
Query: 246 VLKEKLTLKRFAWEYILIDEAHRIKNEQSALSQVIRLFYSKN-RLLITGTPLQNNLHELW 304
++K++ L R W Y++IDE HR+KN QS L+ + +YS RL++TGTPLQNNL ELW
Sbjct: 526 IIKDRPLLSRIKWIYMIIDEGHRMKNTQSKLTNTLTTYYSSRYRLILTGTPLQNNLPELW 585
Query: 305 ALLNFLLPDVFGDSEVFDEWF-----------QQNGKEEDQEVVVQQLHSVLQPFLLRRV 353
ALLNF+LP +F + FDEWF + EE+ +V+++LH VL+PFLLRR+
Sbjct: 586 ALLNFVLPRIFNSIKSFDEWFNTPFANTGGQDKMELTEEESLLVIRRLHKVLRPFLLRRL 645
Query: 354 KSEVEKSLLPKKEINLYVGMTDMQIEWYKSLLEKDIDAVNGAVGKREGKTRLLNIVMQLR 413
K +VE L K E + M+ +Q + Y + + + V A + G L N VMQL+
Sbjct: 646 KKDVEAELPDKVEKVIRCQMSGLQQKLYYQMKKHGMLYVEDAKRGKTGIKGLQNTVMQLK 705
Query: 414 KCCNHPYLFEGAEPG--PPYTTDEHLVFNSGKMIVLDKLLKKKKEQGSRVLIFSQMSRLL 471
K CNHP++FE E P + L SGK +LD++L K G R+L+F QM++++
Sbjct: 706 KICNHPFVFEDVERSIDPTGFNYDMLWRVSGKFELLDRILPKLFRSGHRILMFFQMTQIM 765
Query: 472 DILEDYCYFRGYEYCRIDGSTSHDERVEAIDEYNKPNSEKFIFLLTTRAGGLGINLVTAD 531
+I+EDY ++R + Y R+DGST D+R + + +N P +E +FLL+TRAGGLG+NL TAD
Sbjct: 766 NIMEDYLHYRQWRYLRLDGSTKADDRSKLLGVFNDPTAEVNLFLLSTRAGGLGLNLQTAD 825
Query: 532 TVVLYDSDWNPQADLQAMDRAHRIGQKKQVFVYRFVTENAIEEKVIERAAQKLRLDQLVI 591
TV+++DSDWNP DLQA DRAHRIGQ K+V +YR +TE ++EE ++ RA KL +D VI
Sbjct: 826 TVIIFDSDWNPHQDLQAQDRAHRIGQTKEVRIYRLITEKSVEENILARAQYKLDIDGKVI 885
Query: 592 QQGTGKKTSALTNNKDDLIDMIQFGARDMLQHGSGNITVDEDIDEILKKGERKTLELNAK 651
Q G S + L R +L++ +G +E+ DE KGE ELN +
Sbjct: 886 QAGKFDNKSTPEEREAFL--------RSLLENENG----EEENDE---KGELDDDELN-E 929
Query: 652 YESLGLDDLQKFNGMADQSAYEWNGTNFEKKKPDDHTVDWINPPKRERRREQPLYSVDDY 711
+ G D+L+ F M + E + + K K + + P+ +RE+P + D
Sbjct: 930 ILARGDDELRLFKQMTEDLERE---SPYGKNKEKERLIQVSELPE-FYQREEPEKTTDLL 985
Query: 712 YREVIGNG 719
E +G G
Sbjct: 986 QEEPLGRG 993
>CE05553 [BK] KOG0386 Chromatin remodeling complex SWI/SNF component SWI2 and
related ATPases (DNA/RNA helicase superfamily)
Length = 1474
Score = 441 bits (1135), Expect = e-123
Identities = 236/539 (43%), Positives = 342/539 (62%), Gaps = 28/539 (5%)
Query: 136 LRDYQVYGLNWLISLHESKLSGILADEMGLGKTLQSISFLGYLRYIKGIEGPYIVIVPKS 195
L+ YQ+ GL W++SL+ + L+GILADEMGLGKT+Q+IS + YL +K GPY+VIVP S
Sbjct: 533 LKPYQIKGLEWMVSLYNNNLNGILADEMGLGKTIQTISLVTYLMEVKQNNGPYLVIVPLS 592
Query: 196 TLDNWQREFAKWTPEVKTVILQGDKDFRKELIETKILTCNFDVLITSYEMVLKEKLTLKR 255
TL NWQ EFAKW P V T+I +G KD R+ +E +I F+VL+T+YE V+KEK L +
Sbjct: 593 TLSNWQNEFAKWAPSVTTIIYKGTKDARRR-VEGQIRKGAFNVLMTTYEYVIKEKALLGK 651
Query: 256 FAWEYILIDEAHRIKNEQSALSQVIR-LFYSKNRLLITGTPLQNNLHELWALLNFLLPDV 314
W+Y++IDE HR+KN L+ ++ F++++RLL+TGTPLQN L ELWALLNFLLP +
Sbjct: 652 IRWKYMIIDEGHRLKNHNCKLTLMLNGFFHAQHRLLLTGTPLQNKLPELWALLNFLLPSI 711
Query: 315 FGDSEVFDEWFQQ---------NGKEEDQEVVVQQLHSVLQPFLLRRVKSEVEKSLLPKK 365
F F++WF +E+ +++++LH VL+PFLLRR+K EVE L K
Sbjct: 712 FSSCGTFEQWFNAPFATTGEKVELNQEETMLIIRRLHKVLRPFLLRRLKKEVESQLPDKT 771
Query: 366 EINLYVGMTDMQIEWYKSLLEKDIDAVNGAVGKREGKTRLLNIVMQLRKCCNHPYLFEGA 425
E + + +Q Y+ + + + + G R L+N V+ LRK CNHP+LF
Sbjct: 772 EYVIKCDQSALQKVIYRHMQKGLLLDAKMSSGARS----LMNTVVHLRKLCNHPFLFPNI 827
Query: 426 EPG------PPYTTDEHLVFNSGKMIVLDKLLKKKKEQGSRVLIFSQMSRLLDILEDYCY 479
E L+ +GK+ +LD++L K K G R+L+F QM+ +++I ED+
Sbjct: 828 EDSCRAYWKVNEVNGTDLMRVAGKLELLDRILPKLKATGHRILMFFQMTSMMNIFEDFLN 887
Query: 480 FRGYEYCRIDGSTSHDERVEAIDEYNKPNSEKFIFLLTTRAGGLGINLVTADTVVLYDSD 539
FR Y Y R+DGST DER + + ++N PNS+ F+F+L+TRAGGLG+NL TADTV+++DSD
Sbjct: 888 FRRYTYLRLDGSTKPDERGDLLTQFNAPNSDLFLFMLSTRAGGLGLNLQTADTVIIFDSD 947
Query: 540 WNPQADLQAMDRAHRIGQKKQVFVYRFVTENAIEEKVIERAAQKLRLDQLVIQQGTGKKT 599
WNP D+QA DRAHRIGQKK+V V R +T N++EEK++ A KL +D+ VIQ G +
Sbjct: 948 WNPHQDMQAQDRAHRIGQKKEVRVLRLITANSVEEKILAAARYKLNVDEKVIQAGKFDQR 1007
Query: 600 SALTNNKDDLIDMIQFGARDMLQHGSGNITVDEDIDEILKKGERKTLELNAKYESLGLD 658
S K L +IQ D + + DE +++++ + E E N ++S+ +D
Sbjct: 1008 STGAERKQMLEQIIQ---ADGEEEEEEEVPDDETVNQMVARSEE---EFNI-FQSMDID 1059
>7295870 [K] KOG0384 Chromodomain-helicase DNA-binding protein
Length = 1883
Score = 440 bits (1132), Expect = e-123
Identities = 264/597 (44%), Positives = 366/597 (61%), Gaps = 49/597 (8%)
Query: 128 PSFIKEG-KLRDYQVYGLNWLISLHESKLSGILADEMGLGKTLQSISFLGYLRYIKGIEG 186
P F+ G LRDYQ+ GLNWL+ + S ILADEMGLGKT+Q+I FL L I + G
Sbjct: 519 PEFLSSGLTLRDYQMDGLNWLLHSWCKENSVILADEMGLGKTIQTICFLYSLFKIHHLYG 578
Query: 187 PYIVIVPKSTLDNWQREFAKWTPEVKTVILQGDKDFRKELIET------KILTCNFDVLI 240
P++ +VP ST+ WQREF W P++ V GD R ELI+ F+ ++
Sbjct: 579 PFLCVVPLSTMTAWQREFDLWAPDMNVVTYLGDIKSR-ELIQQYEWQFESSKRLKFNCIL 637
Query: 241 TSYEMVLKEKLTLKRFAWEYILIDEAHRIKNEQSALSQVIRLFYSKNRLLITGTPLQNNL 300
T+YE+VLK+K L W +L+DEAHR+KN+ S L + ++ F + +RLLITGTPLQN+L
Sbjct: 638 TTYEIVLKDKQFLGTLQWAALLVDEAHRLKNDDSLLYKSLKEFDTNHRLLITGTPLQNSL 697
Query: 301 HELWALLNFLLPDVFGDSEVFDEWFQQNGKEEDQEVVVQQLHSVLQPFLLRRVKSEVEKS 360
ELWALL+F++PD F E F+ Q+G ED+ +LH L+P++LRRVK +VEKS
Sbjct: 698 KELWALLHFIMPDKFDTWENFEV---QHGNAEDKGYT--RLHQQLEPYILRRVKKDVEKS 752
Query: 361 LLPKKEINLYVGMTDMQIEWYKSLLEKDIDAVNGAVGKREGKTRLLNIVMQLRKCCNHPY 420
L K E L V MT +Q ++YK +L K+ DA+ GKR + LNIV++L+KCCNH
Sbjct: 753 LPAKVEQILRVEMTSLQKQYYKWILTKNFDALRK--GKRGSTSTFLNIVIELKKCCNHAA 810
Query: 421 LFEGAEPGPPYTTDEH----LVFNSGKMIVLDKLLKKKKEQGSRVLIFSQMSRLLDILED 476
L +E + L+ SGK+++LDKLL + KE G RVLIFSQM R+LD+L D
Sbjct: 811 LIRPSEFELMGLQQDEALQTLLKGSGKLVLLDKLLCRLKETGHRVLIFSQMVRMLDVLAD 870
Query: 477 YCYFRGYEYCRIDGSTSHDERVEAIDEYNKPNSEKFIFLLTTRAGGLGINLVTADTVVLY 536
Y R + + R+DGS + R +A+D +N S+ F FLL+TRAGGLGINL TADTV+++
Sbjct: 871 YLQKRHFPFQRLDGSIKGEMRRQALDHFNAEGSQDFCFLLSTRAGGLGINLATADTVIIF 930
Query: 537 DSDWNPQADLQAMDRAHRIGQKKQVFVYRFVTENAIEEKVIERAAQKLRLDQLVIQQ--- 593
DSDWNPQ DLQA RAHRIGQK QV +YR VT ++EE+++ERA QK+ LD LVIQ+
Sbjct: 931 DSDWNPQNDLQAQARAHRIGQKNQVNIYRLVTARSVEEQIVERAKQKMVLDHLVIQRMDT 990
Query: 594 ---------GTGKKTSALTNNKDDLIDMIQFGA----RDMLQHGSGNITVDEDIDEILKK 640
G G +++ NKDDL +++FGA +D +H + DIDEIL++
Sbjct: 991 TGRTVLDKSGNGHSSNSNPFNKDDLSAILKFGAEELFKDEQEHDDDLVC---DIDEILRR 1047
Query: 641 GERKTLELNAKYESLGLDDLQKFNGMADQSAYEWNGTNFEKKK------PDDHTVDW 691
E + + + DDL +A +A+E ++ K+ +D + DW
Sbjct: 1048 AETRNED-----PEMPADDLLSAFKVASIAAFEEEPSDSVSKQDQNAAGEEDDSKDW 1099
>YIL126w [BK] KOG0386 Chromatin remodeling complex SWI/SNF component SWI2
and related ATPases (DNA/RNA helicase superfamily)
Length = 1359
Score = 440 bits (1131), Expect = e-123
Identities = 228/485 (47%), Positives = 330/485 (68%), Gaps = 17/485 (3%)
Query: 126 QSPSFIKEGKLRDYQVYGLNWLISLHESKLSGILADEMGLGKTLQSISFLGYLRYIKGIE 185
+ PS + G L++YQ+ GL W++SL+ + L+GILADEMGLGKT+QSIS + YL +K
Sbjct: 460 KQPSILVGGTLKEYQLRGLEWMVSLYNNHLNGILADEMGLGKTIQSISLITYLYEVKKDI 519
Query: 186 GPYIVIVPKSTLDNWQREFAKWTPEVKTVILQGDKDFRKELIETKILTCNFDVLITSYEM 245
GP++VIVP ST+ NW EF KW P + T+I +G + R L + +I NFDVL+T+YE
Sbjct: 520 GPFLVIVPLSTITNWTLEFEKWAPSLNTIIYKGTPNQRHSL-QHQIRVGNFDVLLTTYEY 578
Query: 246 VLKEKLTLKRFAWEYILIDEAHRIKNEQSALSQVIRLFY-SKNRLLITGTPLQNNLHELW 304
++K+K L + W +++IDE HR+KN QS LS I +Y ++NRL++TGTPLQNNL ELW
Sbjct: 579 IIKDKSLLSKHDWAHMIIDEGHRMKNAQSKLSFTISHYYRTRNRLILTGTPLQNNLPELW 638
Query: 305 ALLNFLLPDVFGDSEVFDEWFQ----QNGKEEDQEV-------VVQQLHSVLQPFLLRRV 353
ALLNF+LP +F ++ F++WF G +E E+ ++++LH VL+PFLLRR+
Sbjct: 639 ALLNFVLPKIFNSAKTFEDWFNTPFANTGTQEKLELTEEETLLIIRRLHKVLRPFLLRRL 698
Query: 354 KSEVEKSLLPKKEINLYVGMTDMQIEWYKSLLEKDIDAVN-GAVGKREGKTR-LLNIVMQ 411
K EVEK L K E + ++ +Q + Y+ +L+ + V G G +G + L N +MQ
Sbjct: 699 KKEVEKDLPDKVEKVIKCKLSGLQQQLYQQMLKHNALFVGAGTEGATKGGIKGLNNKIMQ 758
Query: 412 LRKCCNHPYLFEGAEP--GPPYTTDEHLVFNSGKMIVLDKLLKKKKEQGSRVLIFSQMSR 469
LRK CNHP++F+ E P + L +GK +LD++L K K G RVL+F QM++
Sbjct: 759 LRKICNHPFVFDEVEGVVNPSRGNSDLLFRVAGKFELLDRVLPKFKASGHRVLMFFQMTQ 818
Query: 470 LLDILEDYCYFRGYEYCRIDGSTSHDERVEAIDEYNKPNSEKFIFLLTTRAGGLGINLVT 529
++DI+ED+ + +Y R+DGST +ER E ++ +N P+S+ F FLL+TRAGGLG+NL T
Sbjct: 819 VMDIMEDFLRMKDLKYMRLDGSTKTEERTEMLNAFNAPDSDYFCFLLSTRAGGLGLNLQT 878
Query: 530 ADTVVLYDSDWNPQADLQAMDRAHRIGQKKQVFVYRFVTENAIEEKVIERAAQKLRLDQL 589
ADTV+++D+DWNP DLQA DRAHRIGQK +V + R +T +++EE ++ERA QKL +D
Sbjct: 879 ADTVIIFDTDWNPHQDLQAQDRAHRIGQKNEVRILRLITTDSVEEVILERAMQKLDIDGK 938
Query: 590 VIQQG 594
VIQ G
Sbjct: 939 VIQAG 943
>CE11572 [K] KOG0384 Chromodomain-helicase DNA-binding protein
Length = 1465
Score = 431 bits (1107), Expect = e-120
Identities = 273/681 (40%), Positives = 395/681 (57%), Gaps = 68/681 (9%)
Query: 128 PSFIKEG-----KLRDYQVYGLNWLISLHESKLSGILADEMGLGKTLQSISFLGYLRYIK 182
P F+K KLRDYQ+ GLNW++ S ILADEMGLGKT+QSIS L L +
Sbjct: 392 PDFLKTDGESTHKLRDYQLEGLNWMVYAWCKGNSSILADEMGLGKTIQSISLLASLFHRY 451
Query: 183 GIEGPYIVIVPKSTLDNWQREFAKWTPEVKTVILQGDKDFRKELIE-------TKILTCN 235
+ GPY+V+VP ST+ WQ+EFA+W PE+ V+ GD R + + TK + N
Sbjct: 452 DLAGPYLVVVPLSTMAAWQKEFAQWAPEMNLVVYMGDVVSRDMIRQYEWFVGGTKKMKIN 511
Query: 236 FDVLITSYEMVLKEKLTLKRFAWEYILIDEAHRIKNEQSALSQVIRLFYSKNRLLITGTP 295
++T+YE++LK+K L W +L+DEAHR+KN++S L + + F ++LLITGTP
Sbjct: 512 --AILTTYEILLKDKAFLSSIDWAALLVDEAHRLKNDESLLYKSLTQFRFNHKLLITGTP 569
Query: 296 LQNNLHELWALLNFLLPDVFGDSEVFDEWFQQNGKEEDQEVVVQQLHSVLQPFLLRRVKS 355
LQN+L ELWALL+F++P+ F E F+ E + LH L+PFLLRRVK
Sbjct: 570 LQNSLKELWALLHFIMPEKFDCWEEFE-----TAHNESNHKGISALHKKLEPFLLRRVKK 624
Query: 356 EVEKSLLPKKEINLYVGMTDMQIEWYKSLLEKDIDAVN-GAVGKREGKTRLLNIVMQLRK 414
+VEKSL PK E L V MT Q ++YK +L K+ ++ G G G +N+VM+L+K
Sbjct: 625 DVEKSLPPKTEQILRVDMTAHQKQFYKWILTKNYRELSKGVKGSING---FVNLVMELKK 681
Query: 415 CCNHP-------YLFEGAEPGPPYTTDEHLVFNSGKMIVLDKLLKKKKEQGSRVLIFSQM 467
CCNH ++++ A+ + L+ +SGK+I+LDKLL + K++G RVLIFSQM
Sbjct: 682 CCNHASLTRQYDHIYDDAQGRL-----QQLLKSSGKLILLDKLLCRLKDKGHRVLIFSQM 736
Query: 468 SRLLDILEDYCYFRGYEYCRIDGSTSHDERVEAIDEYNKPNSEKFIFLLTTRAGGLGINL 527
+LDIL++Y R + R+DGS D R +A+D YN P S F FLL+TRAGGLGINL
Sbjct: 737 VMMLDILQEYLQLRRFPSQRLDGSMRADLRKQALDHYNAPGSTDFAFLLSTRAGGLGINL 796
Query: 528 VTADTVVLYDSDWNPQADLQAMDRAHRIGQKKQVFVYRFVTENAIEEKVIERAAQKLRLD 587
TADTV+++DSDWNPQ DLQAM RAHRIGQ K V +YR VT+ ++EE+++ERA +KL LD
Sbjct: 797 ATADTVIIFDSDWNPQNDLQAMSRAHRIGQTKTVNIYRLVTKGSVEEEIVERAKRKLVLD 856
Query: 588 QLVIQQ--GTGK--------KTSALTNNKDDLIDMIQFGARDMLQHGSGNITVDE-DIDE 636
LVIQ+ TGK + ++ +K +L +++FGA ++ + G E DID
Sbjct: 857 HLVIQRMDTTGKTVLSKNATASGSVPFDKQELSAILKFGAVELFKEKEGEEQEPEVDIDR 916
Query: 637 ILKKGERKTLE----------LNAKYESLGLDDLQKFNGMADQSAYEWNGTNFEKKKPDD 686
IL E + E + KY + +D+ + D+ A + + ++
Sbjct: 917 ILMGAETREAEEEVMKENELLSSFKYANFAIDEEKDIAAATDEWAAIIPEEDRNRILEEE 976
Query: 687 HTVDWINPPKRERRREQPLYSV-------DDYYREVIGNGKSKPSGSNTPALKLPKQPKV 739
+ R+R+QP+ V DD + G K K + N +P+ +
Sbjct: 977 RMKELAEMNLAPRQRKQPIPQVVEDDDGDDDEEEDDTGKKKKKKAVGN---FTIPEIKRF 1033
Query: 740 IRMTYYQFAHPEFVRLQELEQ 760
I+ ++ +F+ P RL+E+ Q
Sbjct: 1034 IK-SFRKFSMP-LNRLEEIAQ 1052
>Hs21071056 [BK] KOG0386 Chromatin remodeling complex SWI/SNF component SWI2 and
related ATPases (DNA/RNA helicase superfamily)
Length = 1647
Score = 429 bits (1102), Expect = e-119
Identities = 228/522 (43%), Positives = 331/522 (62%), Gaps = 33/522 (6%)
Query: 134 GKLRDYQVYGLNWLISLHESKLSGILADEMGLGKTLQSISFLGYLRYIKGIEGPYIVIVP 193
G L+ YQ+ GL WL+SL+ + L+GILADEMGLGKT+Q+I+ + YL K I GP+++IVP
Sbjct: 752 GVLKQYQIKGLEWLVSLYNNNLNGILADEMGLGKTIQTIALITYLMEHKRINGPFLIIVP 811
Query: 194 KSTLDNWQREFAKWTPEVKTVILQGDKDFRKELIETKILTCNFDVLITSYEMVLKEKLTL 253
STL NW EF KW P V V +G R+ + ++ + F+VL+T+YE ++K+K L
Sbjct: 812 LSTLSNWAYEFDKWAPSVVKVSYKGSPAARRAFVP-QLRSGKFNVLLTTYEYIIKDKHIL 870
Query: 254 KRFAWEYILIDEAHRIKNEQSALSQVIRLFY-SKNRLLITGTPLQNNLHELWALLNFLLP 312
+ W+Y+++DE HR+KN L+QV+ Y + RLL+TGTPLQN L ELWALLNFLLP
Sbjct: 871 AKIRWKYMIVDEGHRMKNHHCKLTQVLNTHYVAPRRLLLTGTPLQNKLPELWALLNFLLP 930
Query: 313 DVFGDSEVFDEWFQQ---------NGKEEDQEVVVQQLHSVLQPFLLRRVKSEVEKSLLP 363
+F F++WF + EE+ +++++LH VL+PFLLRR+K EVE L
Sbjct: 931 TIFKSCSTFEQWFNAPFAMTGEKVDLNEEETILIIRRLHKVLRPFLLRRLKKEVEAQLPE 990
Query: 364 KKEINLYVGMTDMQIEWYKSLLEKDIDAVNGAVGKREGK---TRLLNIVMQLRKCCNHPY 420
K E + M+ +Q Y+ + K + +G+ ++GK L+N +MQLRK CNHPY
Sbjct: 991 KVEYVIKCDMSALQRVLYRHMQAKGVLLTDGSEKDKKGKGGTKTLMNTIMQLRKICNHPY 1050
Query: 421 LFEGAEPGPPYTTDEHLVFN------------SGKMIVLDKLLKKKKEQGSRVLIFSQMS 468
+F+ E + EHL F SGK +LD++L K + +VL+F QM+
Sbjct: 1051 MFQHIEE----SFSEHLGFTGGIVQGLDLYRASGKFELLDRILPKLRATNHKVLLFCQMT 1106
Query: 469 RLLDILEDYCYFRGYEYCRIDGSTSHDERVEAIDEYNKPNSEKFIFLLTTRAGGLGINLV 528
L+ I+EDY +RG++Y R+DG+T ++R + +N+P SE FIFLL+TRAGGLG+NL
Sbjct: 1107 SLMTIMEDYFAYRGFKYLRLDGTTKAEDRGMLLKTFNEPGSEYFIFLLSTRAGGLGLNLQ 1166
Query: 529 TADTVVLYDSDWNPQADLQAMDRAHRIGQKKQVFVYRFVTENAIEEKVIERAAQKLRLDQ 588
+ADTV+++DSDWNP DLQA DRAHRIGQ+ +V V R T N++EEK++ A KL +DQ
Sbjct: 1167 SADTVIIFDSDWNPHQDLQAQDRAHRIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQ 1226
Query: 589 LVIQQGTGKKTSALTNNKDDLIDMIQFGARDMLQH---GSGN 627
VIQ G + S+ + L +++ +D +H GSG+
Sbjct: 1227 KVIQAGMFDQKSSSHERRAFLQAILEHEEQDESRHCSTGSGS 1268
>CE27114 [BK] KOG0386 Chromatin remodeling complex SWI/SNF component SWI2
and related ATPases (DNA/RNA helicase superfamily)
Length = 1336
Score = 427 bits (1098), Expect = e-119
Identities = 230/526 (43%), Positives = 334/526 (62%), Gaps = 24/526 (4%)
Query: 135 KLRDYQVYGLNWLISLHESKLSGILADEMGLGKTLQSISFLGYLRYIKGIEGPYIVIVPK 194
KL+ YQ+ GL W++SL + L+GILADEMGLGKT+Q+I+F+ YL IK GP++VIVP
Sbjct: 365 KLKPYQIKGLEWMVSLFNNNLNGILADEMGLGKTIQTIAFITYLMEIKKTSGPFLVIVPL 424
Query: 195 STLDNWQREFAKWTPEVKTVILQGDKDFRKELIETKILTCNFDVLITSYEMVLKEKLTLK 254
ST+ NWQ EF KW V + +G K+ RK + E I + F+VL+T++E V++EK L
Sbjct: 425 STVPNWQNEFDKWAANVHLIAYKGPKETRK-VFEPIIKSGKFNVLLTTFEYVIREKALLG 483
Query: 255 RFAWEYILIDEAHRIKNEQSALSQVIRL-FYSKNRLLITGTPLQNNLHELWALLNFLLPD 313
+ W+Y++IDE HR+KN+ L++++ F + RLLITGTPLQN L ELWALLNFLLP
Sbjct: 484 KLRWKYMIIDEGHRLKNQHCKLTEMLNTRFQCQRRLLITGTPLQNKLPELWALLNFLLPS 543
Query: 314 VFGDSEVFDEWFQQ----NGK-----EEDQEVVVQQLHSVLQPFLLRRVKSEVEKSLLPK 364
+F F++WF G+ +E+ +++++LH VL+PFLLRR+K EVE L K
Sbjct: 544 IFSSCSTFEQWFNAPFATTGEKVELTQEETMLIIRRLHKVLRPFLLRRLKKEVESELPDK 603
Query: 365 KEINLYVGMTDMQIEWYKSLLEKDIDAVNGAVGKREGKTRLLNIVMQLRKCCNHPYLFEG 424
E + M+ +Q YK + +K + ++G G L N ++ LRK CNHP+LFE
Sbjct: 604 MEFVVRCDMSALQKVLYKHM-QKGL-LLDGKTNT--GSKSLRNTMIHLRKLCNHPFLFEN 659
Query: 425 AEPGPPYTTDEHLVFN------SGKMIVLDKLLKKKKEQGSRVLIFSQMSRLLDILEDYC 478
E D + SGK+ +L ++L K + G RVL+F QM+ ++ I+ED+
Sbjct: 660 VEESCRNFWDARFISAVDLYRVSGKLELLSRILPKLQATGHRVLMFFQMTSMMTIVEDFL 719
Query: 479 YFRGYEYCRIDGSTSHDERVEAIDEYNKPNSEKFIFLLTTRAGGLGINLVTADTVVLYDS 538
+Y R+DGST DER +D++N PNSE F+F+L+TRAGGLG+NL TADTV+++DS
Sbjct: 720 AGGTIQYLRLDGSTKPDERGALLDKFNAPNSEYFLFMLSTRAGGLGLNLQTADTVIIFDS 779
Query: 539 DWNPQADLQAMDRAHRIGQKKQVFVYRFVTENAIEEKVIERAAQKLRLDQLVIQQGTGKK 598
DWNP D+QA DRAHRIGQK +V V+R +T N++EEK++ A KL +D+ VIQ G
Sbjct: 780 DWNPHQDMQAQDRAHRIGQKAEVRVFRLITANSVEEKILAAARYKLNVDEKVIQAGKFDN 839
Query: 599 TSALTNNKDDLIDMIQFGARDMLQHGSGNITVDEDIDEILKKGERK 644
S ++ L ++I+ + + DEDI++IL + E +
Sbjct: 840 RSTGAERREILENIIK---TENESEEDEEVPNDEDINDILSRSEEE 882
>Hs21071050 [BK] KOG0386 Chromatin remodeling complex SWI/SNF component SWI2 and
related ATPases (DNA/RNA helicase superfamily)
Length = 1568
Score = 426 bits (1094), Expect = e-118
Identities = 228/528 (43%), Positives = 330/528 (62%), Gaps = 38/528 (7%)
Query: 134 GKLRDYQVYGLNWLISLHESKLSGILADEMGLGKTLQSISFLGYLRYIKGIEGPYIVIVP 193
G L+ YQ+ GL W++SL+ + L+GILADEMGLGKT+Q+I+ + YL K + GPY++IVP
Sbjct: 718 GTLKHYQLQGLEWMVSLYNNNLNGILADEMGLGKTIQTIALITYLMEHKRLNGPYLIIVP 777
Query: 194 KSTLDNWQREFAKWTPEVKTVILQGDKDFRKELIETKILTCNFDVLITSYEMVLKEKLTL 253
STL NW EF KW P V + +G R+ L+ ++ + F+VL+T+YE ++K+K L
Sbjct: 778 LSTLSNWTYEFDKWAPSVVKISYKGTPAMRRSLVP-QLRSGKFNVLLTTYEYIIKDKHIL 836
Query: 254 KRFAWEYILIDEAHRIKNEQSALSQVIRLFY-SKNRLLITGTPLQNNLHELWALLNFLLP 312
+ W+Y+++DE HR+KN L+QV+ Y + R+L+TGTPLQN L ELWALLNFLLP
Sbjct: 837 AKIRWKYMIVDEGHRMKNHHCKLTQVLNTHYVAPRRILLTGTPLQNKLPELWALLNFLLP 896
Query: 313 DVFGDSEVFDEWFQQ---------NGKEEDQEVVVQQLHSVLQPFLLRRVKSEVEKSLLP 363
+F F++WF + EE+ +++++LH VL+PFLLRR+K EVE L
Sbjct: 897 TIFKSCSTFEQWFNAPFAMTGERVDLNEEETILIIRRLHKVLRPFLLRRLKKEVESQLPE 956
Query: 364 KKEINLYVGMTDMQIEWYKSLLEKDIDAVNGAVGKREGK---TRLLNIVMQLRKCCNHPY 420
K E + M+ +Q Y+ + K I +G+ ++GK L+N +MQLRK CNHPY
Sbjct: 957 KVEYVIKCDMSALQKILYRHMQAKGILLTDGSEKDKKGKGGAKTLMNTIMQLRKICNHPY 1016
Query: 421 LFEGAEPGPPYTTDEHLVFN------------SGKMIVLDKLLKKKKEQGSRVLIFSQMS 468
+F+ E + EHL ++ SGK +LD++L K + RVL+F QM+
Sbjct: 1017 MFQHIEE----SFAEHLGYSNGVINGAELYRASGKFELLDRILPKLRATNHRVLLFCQMT 1072
Query: 469 RLLDILEDYCYFRGYEYCRIDGSTSHDERVEAIDEYNKPNSEKFIFLLTTRAGGLGINLV 528
L+ I+EDY FR + Y R+DG+T ++R + ++N+P S+ FIFLL+TRAGGLG+NL
Sbjct: 1073 SLMTIMEDYFAFRNFLYLRLDGTTKSEDRAALLKKFNEPGSQYFIFLLSTRAGGLGLNLQ 1132
Query: 529 TADTVVLYDSDWNPQADLQAMDRAHRIGQKKQVFVYRFVTENAIEEKVIERAAQKLRLDQ 588
ADTVV++DSDWNP DLQA DRAHRIGQ+ +V V R T N++EEK++ A KL +DQ
Sbjct: 1133 AADTVVIFDSDWNPHQDLQAQDRAHRIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQ 1192
Query: 589 LVIQQGTGKKTSALTNNKDDLIDMIQFGARDMLQHGSGNITVDEDIDE 636
VIQ G + S+ + L + +L+H N DE D+
Sbjct: 1193 KVIQAGMFDQKSSSHERRAFL--------QAILEHEEENEEEDEVPDD 1232
>Hs21071048 [BK] KOG0386 Chromatin remodeling complex SWI/SNF component SWI2 and
related ATPases (DNA/RNA helicase superfamily)
Length = 1586
Score = 426 bits (1094), Expect = e-118
Identities = 228/528 (43%), Positives = 330/528 (62%), Gaps = 38/528 (7%)
Query: 134 GKLRDYQVYGLNWLISLHESKLSGILADEMGLGKTLQSISFLGYLRYIKGIEGPYIVIVP 193
G L+ YQ+ GL W++SL+ + L+GILADEMGLGKT+Q+I+ + YL K + GPY++IVP
Sbjct: 718 GTLKHYQLQGLEWMVSLYNNNLNGILADEMGLGKTIQTIALITYLMEHKRLNGPYLIIVP 777
Query: 194 KSTLDNWQREFAKWTPEVKTVILQGDKDFRKELIETKILTCNFDVLITSYEMVLKEKLTL 253
STL NW EF KW P V + +G R+ L+ ++ + F+VL+T+YE ++K+K L
Sbjct: 778 LSTLSNWTYEFDKWAPSVVKISYKGTPAMRRSLVP-QLRSGKFNVLLTTYEYIIKDKHIL 836
Query: 254 KRFAWEYILIDEAHRIKNEQSALSQVIRLFY-SKNRLLITGTPLQNNLHELWALLNFLLP 312
+ W+Y+++DE HR+KN L+QV+ Y + R+L+TGTPLQN L ELWALLNFLLP
Sbjct: 837 AKIRWKYMIVDEGHRMKNHHCKLTQVLNTHYVAPRRILLTGTPLQNKLPELWALLNFLLP 896
Query: 313 DVFGDSEVFDEWFQQ---------NGKEEDQEVVVQQLHSVLQPFLLRRVKSEVEKSLLP 363
+F F++WF + EE+ +++++LH VL+PFLLRR+K EVE L
Sbjct: 897 TIFKSCSTFEQWFNAPFAMTGERVDLNEEETILIIRRLHKVLRPFLLRRLKKEVESQLPE 956
Query: 364 KKEINLYVGMTDMQIEWYKSLLEKDIDAVNGAVGKREGK---TRLLNIVMQLRKCCNHPY 420
K E + M+ +Q Y+ + K I +G+ ++GK L+N +MQLRK CNHPY
Sbjct: 957 KVEYVIKCDMSALQKILYRHMQAKGILLTDGSEKDKKGKGGAKTLMNTIMQLRKICNHPY 1016
Query: 421 LFEGAEPGPPYTTDEHLVFN------------SGKMIVLDKLLKKKKEQGSRVLIFSQMS 468
+F+ E + EHL ++ SGK +LD++L K + RVL+F QM+
Sbjct: 1017 MFQHIEE----SFAEHLGYSNGVINGAELYRASGKFELLDRILPKLRATNHRVLLFCQMT 1072
Query: 469 RLLDILEDYCYFRGYEYCRIDGSTSHDERVEAIDEYNKPNSEKFIFLLTTRAGGLGINLV 528
L+ I+EDY FR + Y R+DG+T ++R + ++N+P S+ FIFLL+TRAGGLG+NL
Sbjct: 1073 SLMTIMEDYFAFRNFLYLRLDGTTKSEDRAALLKKFNEPGSQYFIFLLSTRAGGLGLNLQ 1132
Query: 529 TADTVVLYDSDWNPQADLQAMDRAHRIGQKKQVFVYRFVTENAIEEKVIERAAQKLRLDQ 588
ADTVV++DSDWNP DLQA DRAHRIGQ+ +V V R T N++EEK++ A KL +DQ
Sbjct: 1133 AADTVVIFDSDWNPHQDLQAQDRAHRIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQ 1192
Query: 589 LVIQQGTGKKTSALTNNKDDLIDMIQFGARDMLQHGSGNITVDEDIDE 636
VIQ G + S+ + L + +L+H N DE D+
Sbjct: 1193 KVIQAGMFDQKSSSHERRAFL--------QAILEHEEENEEEDEVPDD 1232
>7294205 [BK] KOG0386 Chromatin remodeling complex SWI/SNF component SWI2 and
related ATPases (DNA/RNA helicase superfamily)
Length = 1638
Score = 426 bits (1094), Expect = e-118
Identities = 229/539 (42%), Positives = 335/539 (61%), Gaps = 23/539 (4%)
Query: 126 QSPSFIKEGKLRDYQVYGLNWLISLHESKLSGILADEMGLGKTLQSISFLGYLRYIKGIE 185
+ S + G L++YQ+ GL WL+SL+ + L+GILADEMGLGKT+Q+IS + YL K +
Sbjct: 763 EQASIMVNGTLKEYQIKGLEWLVSLYNNNLNGILADEMGLGKTIQTISLVTYLMDRKKVM 822
Query: 186 GPYIVIVPKSTLDNWQREFAKWTPEVKTVILQGDKDFRKELIETKILTCNFDVLITSYEM 245
GPY++IVP STL NW EF KW P V V +G R+ L++ ++ F+VL+T+YE
Sbjct: 823 GPYLIIVPLSTLPNWVLEFEKWAPAVGVVSYKGSPQGRR-LLQNQMRATKFNVLLTTYEY 881
Query: 246 VLKEKLTLKRFAWEYILIDEAHRIKNEQSALSQVIRLFY-SKNRLLITGTPLQNNLHELW 304
V+K+K L + W+Y++IDE HR+KN L+QV+ Y + RLL+TGTPLQN L ELW
Sbjct: 882 VIKDKAVLAKIQWKYMIIDEGHRMKNHHCKLTQVLNTHYIAPYRLLLTGTPLQNKLPELW 941
Query: 305 ALLNFLLPDVFGDSEVFDEWFQQ---------NGKEEDQEVVVQQLHSVLQPFLLRRVKS 355
ALLNFLLP +F F++WF EE+ +++++LH VL+PFLLRR+K
Sbjct: 942 ALLNFLLPSIFKSCSTFEQWFNAPFATTGEKVELNEEETILIIRRLHKVLRPFLLRRLKK 1001
Query: 356 EVEKSLLPKKEINLYVGMTDMQIEWYKSLLEKDIDAVNGAVGKREGK---TRLLNIVMQL 412
EVE L K E + M+ +Q YK + K + +G+ + GK L+N ++QL
Sbjct: 1002 EVEHQLPDKVEYIIKCDMSALQRVLYKHMQSKGVLLTDGSEKGKHGKGGAKALMNTIVQL 1061
Query: 413 RKCCNHPYLFEGAEPGPPYTTDEHLVFN-------SGKMIVLDKLLKKKKEQGSRVLIFS 465
RK CNHP++F+ E T H V + SGK +LD++L K K RVL+F
Sbjct: 1062 RKLCNHPFMFQHIEEKYCDHTGGHGVVSGPDLYRVSGKFELLDRILPKLKATNHRVLLFC 1121
Query: 466 QMSRLLDILEDYCYFRGYEYCRIDGSTSHDERVEAIDEYNKPNSEKFIFLLTTRAGGLGI 525
QM++ + I+EDY +R + Y R+DG+T ++R E + ++N S+ F+FLL+TRAGGLG+
Sbjct: 1122 QMTQCMTIIEDYLGWRQFGYLRLDGTTKAEDRGELLRKFNAKGSDVFVFLLSTRAGGLGL 1181
Query: 526 NLVTADTVVLYDSDWNPQADLQAMDRAHRIGQKKQVFVYRFVTENAIEEKVIERAAQKLR 585
NL TADTVV++DSDWNP DLQA DRAHRIGQ+ +V V R +T N++EE+++ A KL
Sbjct: 1182 NLQTADTVVIFDSDWNPHQDLQAQDRAHRIGQRNEVRVLRLMTVNSVEERILAAARYKLN 1241
Query: 586 LDQLVIQQGTGKKTSALTNNKDDLIDMIQFGARDMLQHGSGNITVDEDIDEILKKGERK 644
+D+ VIQ G + S + + L ++ D + + DE I+ ++ + E +
Sbjct: 1242 MDEKVIQAGMFDQKSTGSERQQFLQTILH--QDDNEEEEENEVPDDEMINMMIARSEEE 1298
>Hs20533808 [R] KOG0383 Predicted helicase
Length = 1954
Score = 425 bits (1093), Expect = e-118
Identities = 231/535 (43%), Positives = 338/535 (63%), Gaps = 43/535 (8%)
Query: 134 GKLRDYQVYGLNWLISLHESKLSGILADEMGLGKTLQSISFLGYLRYIKG-IEGPYIVIV 192
G L YQ+ GLNWL ILADEMGLGKT+Q+I FL Y Y +G +GPY+V
Sbjct: 698 GTLHPYQLEGLNWLRFSWAQGTDTILADEMGLGKTVQTIVFL-YSLYKEGHSKGPYLVSA 756
Query: 193 PKSTLDNWQREFAKWTPEVKTVILQGDKDFRKELIET-------------------KILT 233
P ST+ NW+REF W P+ V GDK+ R + E K +
Sbjct: 757 PLSTIINWEREFEMWAPDFYVVTYTGDKESRSVIRENEFSFEDNAIRSGKKVFRMKKEVQ 816
Query: 234 CNFDVLITSYEMVLKEKLTLKRFAWEYILIDEAHRIKNEQSALSQVIRLFYSKNRLLITG 293
F VL+TSYE++ ++ L W +++DEAHR+KN QS +V+ + +LL+TG
Sbjct: 817 IKFHVLLTSYELITIDQAILGSIEWACLVVDEAHRLKNNQSKFFRVLNSYKIDYKLLLTG 876
Query: 294 TPLQNNLHELWALLNFLLPDVFGDSEVFDEWFQQNGKEEDQEVVVQQLHSVLQPFLLRRV 353
TPLQNNL EL+ LLNFL P+ F + E F E F KE+ +++LH +L P +LRR+
Sbjct: 877 TPLQNNLEELFHLLNFLTPERFNNLEGFLEEFADISKEDQ----IKKLHDLLGPHMLRRL 932
Query: 354 KSEVEKSLLPKKEINLYVGMTDMQIEWYKSLLEKDIDAVNGAVGKREGKTRLLNIVMQLR 413
K++V K++ K E+ + V ++ MQ ++YK +L ++ +A+N G + LLNI+M L+
Sbjct: 933 KADVFKNMPAKTELIVRVELSQMQKKYYKFILTRNFEALNSKGGGNQ--VSLLNIMMDLK 990
Query: 414 KCCNHPYLFEGAEPGPPYTTD-----EHLVFNSGKMIVLDKLLKKKKEQGSRVLIFSQMS 468
KCCNHPYLF A P + LV +SGK+++L K+LKK +++G RVLIFSQM+
Sbjct: 991 KCCNHPYLFPVAAVEAPVLPNGSYDGSSLVKSSGKLMLLQKMLKKLRDEGHRVLIFSQMT 1050
Query: 469 RLLDILEDYCYFRGYEYCRIDGSTSHDERVEAIDEYNKPNSEKFIFLLTTRAGGLGINLV 528
++LD+LED+ + GY+Y RIDG + R EAID +N P +++F FLL+TRAGGLGINL
Sbjct: 1051 KMLDLLEDFLEYEGYKYERIDGGITGGLRQEAIDRFNAPGAQQFCFLLSTRAGGLGINLA 1110
Query: 529 TADTVVLYDSDWNPQADLQAMDRAHRIGQKKQVFVYRFVTENAIEEKVIERAAQKLRLDQ 588
TADTV++YDSDWNP D+QA RAHRIGQ K+V +YRFVT ++EE++ + A +K+ L
Sbjct: 1111 TADTVIIYDSDWNPHNDIQAFSRAHRIGQNKKVMIYRFVTRASVEERITQVAKRKMMLTH 1170
Query: 589 LVIQQGTGKKTSALTNNKDDLIDMIQFGARDMLQHGSGNITVDEDIDEILKKGER 643
LV++ G G K+ ++T K +L D+++FG ++ + +D++ ++ +G+R
Sbjct: 1171 LVVRPGLGSKSGSMT--KQELDDILKFGTEELFK---------DDVEGMMSQGQR 1214
>At5g66750 [K] KOG0385 Chromatin remodeling complex WSTF-ISWI small subunit
Length = 764
Score = 424 bits (1091), Expect = e-118
Identities = 238/531 (44%), Positives = 342/531 (63%), Gaps = 26/531 (4%)
Query: 134 GKLRDYQVYGLNWLISLHESKLSGILADEMGLGKTLQSISFLGYLRYIKGIEGPYIVIVP 193
G+L+ YQ+ G+ WLISL ++ L+GILAD+MGLGKT+Q+I FL +L+ G++GPY+VI P
Sbjct: 200 GQLKSYQLKGVKWLISLWQNGLNGILADQMGLGKTIQTIGFLSHLKG-NGLDGPYLVIAP 258
Query: 194 KSTLDNWQREFAKWTPEVKTVILQGDKDFRKELIET---KILTCNFDVLITSYEMVLKE- 249
STL NW E A++TP + +I GDK+ R EL K + F ++ITSYE+ + +
Sbjct: 259 LSTLSNWFNEIARFTPSINAIIYHGDKNQRDELRRKHMPKTVGPKFPIVITSYEVAMNDA 318
Query: 250 KLTLKRFAWEYILIDEAHRIKNEQSALSQVIRLFYSKNRLLITGTPLQNNLHELWALLNF 309
K L+ + W+Y++IDE HR+KN + L + ++ N+LL+TGTPLQNNL ELW+LLNF
Sbjct: 319 KRILRHYPWKYVVIDEGHRLKNHKCKLLRELKHLKMDNKLLLTGTPLQNNLSELWSLLNF 378
Query: 310 LLPDVFGDSEVFDEWFQ-------QNGKEEDQE---VVVQQLHSVLQPFLLRRVKSEVEK 359
+LPD+F + F+ WF + KEE+++ VV +LH +L+PF+LRR+K +VE
Sbjct: 379 ILPDIFTSHDEFESWFDFSEKNKNEATKEEEEKRRAQVVSKLHGILRPFILRRMKCDVEL 438
Query: 360 SLLPKKEINLYVGMTDMQIEWYKSLLEKDIDAVNG--AVGKREGKTRLLNIVMQLRKCCN 417
SL KKEI +Y MTD Q ++ + L+ ++A G A+ + K +L N+V+QLRK CN
Sbjct: 439 SLPRKKEIIMYATMTDHQKKFQEHLVNNTLEAHLGENAIRGQGWKGKLNNLVIQLRKNCN 498
Query: 418 HPYLFEGAEPGPP-YTTDEHLVFNSGKMIVLDKLLKKKKEQGSRVLIFSQMSRLLDILED 476
HP L +G G Y E +V GK +L++LL + +VLIFSQ ++LLDI++
Sbjct: 499 HPDLLQGQIDGSYLYPPVEEIVGQCGKFRLLERLLVRLFANNHKVLIFSQWTKLLDIMDY 558
Query: 477 YCYFRGYEYCRIDGSTSHDERVEAIDEYNKPNSEKFIFLLTTRAGGLGINLVTADTVVLY 536
Y +G+E CRIDGS DER I +++ S IFLL+TRAGGLGINL ADT +LY
Sbjct: 559 YFSEKGFEVCRIDGSVKLDERRRQIKDFSDEKSSCSIFLLSTRAGGLGINLTAADTCILY 618
Query: 537 DSDWNPQADLQAMDRAHRIGQKKQVFVYRFVTENAIEEKVIERAAQKLRLDQLVIQQGTG 596
DSDWNPQ DLQAMDR HRIGQ K V VYR T +IE +V++RA KL+L+ +VI QG
Sbjct: 619 DSDWNPQMDLQAMDRCHRIGQTKPVHVYRLSTAQSIETRVLKRAYSKLKLEHVVIGQGQF 678
Query: 597 KKTSALTN---NKDDLIDMIQFG--ARDMLQHGSGNITVDEDIDEILKKGE 642
+ A ++ ++D++ +++ A D L D D+D +L + +
Sbjct: 679 HQERAKSSTPLEEEDILALLKEDETAEDKLIQTD---ISDADLDRLLDRSD 726
>CE17716 [R] KOG0383 Predicted helicase
Length = 1829
Score = 421 bits (1083), Expect = e-117
Identities = 233/543 (42%), Positives = 334/543 (60%), Gaps = 42/543 (7%)
Query: 128 PSFIKE--GKLRDYQVYGLNWLISLHESKLSGILADEMGLGKTLQSISFLGYLRYIKGIE 185
P ++ E GKL YQ+ GLNWL + ILADEMGLGKT+QS++FL L +
Sbjct: 592 PDYVTETGGKLHPYQLEGLNWLRHCWSNGTDAILADEMGLGKTVQSLTFLYSLMKEGHCK 651
Query: 186 GPYIVIVPKSTLDNWQREFAKWTPEVKTVILQGDKDFRKELIE----------------T 229
GP+++ P ST+ NW+RE +W P+ V G +D R L E +
Sbjct: 652 GPFLIAAPLSTIINWEREAEQWCPDFYVVTYVGLRDARVVLREHEFSFVEGAVRSGPKAS 711
Query: 230 KILTCN---FDVLITSYEMVLKEKLTLKRFAWEYILIDEAHRIKNEQSALSQVIRLFYSK 286
K+ T F VL+TSYE + +K L W +++DEAHR+KN QS + + +
Sbjct: 712 KMKTTENMKFHVLLTSYETINMDKTILSSIEWGALVVDEAHRLKNNQSLFFKNLNEYTIH 771
Query: 287 NRLLITGTPLQNNLHELWALLNFLLPDVFGDSEVFDEWFQQNGKEEDQEVVVQQLHSVLQ 346
R+L+TGTPLQNNL EL+ LLNFL + F E F F + KE+ +++LH++L
Sbjct: 772 YRVLLTGTPLQNNLEELFHLLNFLSKERFNQLEAFTAEFNEISKEDQ----IEKLHNLLG 827
Query: 347 PFLLRRVKSEVEKSLLPKKEINLYVGMTDMQIEWYKSLLEKDIDAVNGAVGKREGKTRLL 406
P +LRR+K++V + K E+ + V ++ MQ +WYK++L ++ DA+N G + L+
Sbjct: 828 PHMLRRLKADVLTGMPSKSELIVRVELSAMQKKWYKNILTRNFDALNVKNGGTQ--MSLM 885
Query: 407 NIVMQLRKCCNHPYLFEGAEPGPPYTTD-----EHLVFNSGKMIVLDKLLKKKKEQGSRV 461
N++M+L+KCCNHPYLF AE P + L+ NSGK ++L K+L+K K+ G RV
Sbjct: 886 NVLMELKKCCNHPYLFVKAELEAPKEKNGMYEGTALIKNSGKFVLLQKMLRKLKDGGHRV 945
Query: 462 LIFSQMSRLLDILEDYCYFRGYEYCRIDGSTSHDERVEAIDEYNKPNSEKFIFLLTTRAG 521
LIFSQM+R+LDI+ED C + GY Y RIDGS R +AID YN P +++FIFLL+TRAG
Sbjct: 946 LIFSQMTRMLDIMEDLCEYEGYRYERIDGSIMGQMRQDAIDRYNAPGAQQFIFLLSTRAG 1005
Query: 522 GLGINLVTADTVVLYDSDWNPQADLQAMDRAHRIGQKKQVFVYRFVTENAIEEKVIERAA 581
GLGINL TADTV++YDSDWNP D+QA RAHR+GQK +V +YRFVT+ ++EEK+ A
Sbjct: 1006 GLGINLATADTVIIYDSDWNPHNDIQAFSRAHRLGQKHKVMIYRFVTKKSVEEKITSVAK 1065
Query: 582 QKLRLDQLVIQQGTGKKTSALTNNKDDLIDMIQFGARDMLQHGSGNITVDEDIDEILKKG 641
+K+ L+ LV++ G G K T +K +L D++++G ++ ED+D +G
Sbjct: 1066 KKMLLNHLVVRAGLGGK-EGKTMSKTELDDVLRWGTEELF---------SEDLDAAEGEG 1115
Query: 642 ERK 644
K
Sbjct: 1116 SEK 1118
>CE03657 [R] KOG0383 Predicted helicase
Length = 1787
Score = 419 bits (1078), Expect = e-117
Identities = 226/521 (43%), Positives = 331/521 (63%), Gaps = 33/521 (6%)
Query: 128 PSFIKE--GKLRDYQVYGLNWLISLHESKLSGILADEMGLGKTLQSISFLGYLRYIKGIE 185
P FI E G L YQ+ G+NWL + ILADEMGLGKT+QS++FL L +
Sbjct: 606 PDFISETGGNLHPYQLEGINWLRHCWSNGTDAILADEMGLGKTVQSLTFLYTLMKEGHTK 665
Query: 186 GPYIVIVPKSTLDNWQREFAKWTPEVKTVILQGDKDFRKELIE----------------T 229
GP+++ P ST+ NW+RE W P+ V GD++ R + E +
Sbjct: 666 GPFLIAAPLSTIINWEREAELWCPDFYVVTYVGDRESRMVIREHEFSFVDGAVRGGPKVS 725
Query: 230 KILTCN---FDVLITSYEMVLKEKLTLKRFAWEYILIDEAHRIKNEQSALSQVIRLFYSK 286
KI T F VL+TSYE + +K L W +++DEAHR+KN QS + +R + +
Sbjct: 726 KIKTLENLKFHVLLTSYECINMDKAILSSIDWAALVVDEAHRLKNNQSTFFKNLREYNIQ 785
Query: 287 NRLLITGTPLQNNLHELWALLNFLLPDVFGDSEVFDEWFQQNGKEEDQEVVVQQLHSVLQ 346
R+L+TGTPLQNNL EL+ LLNFL PD F E F F + KE+ +++LH++L
Sbjct: 786 YRVLLTGTPLQNNLEELFHLLNFLAPDRFNQLESFTAEFSEISKEDQ----IEKLHNLLG 841
Query: 347 PFLLRRVKSEVEKSLLPKKEINLYVGMTDMQIEWYKSLLEKDIDAVNGAVGKREGKTRLL 406
P +LRR+K++V + K+E+ + V ++ MQ ++YK++L ++ DA+N G + L+
Sbjct: 842 PHMLRRLKADVLTGMPSKQELIVRVELSAMQKKYYKNILTRNFDALNVKNGGTQ--MSLI 899
Query: 407 NIVMQLRKCCNHPYLFEGAEPGPPYTTD-----EHLVFNSGKMIVLDKLLKKKKEQGSRV 461
NI+M+L+KCCNHPYLF A P + L+ N+GK ++L K+L+K K+ G RV
Sbjct: 900 NIIMELKKCCNHPYLFMKACLEAPKLKNGMYEGSALIKNAGKFVLLQKMLRKLKDGGHRV 959
Query: 462 LIFSQMSRLLDILEDYCYFRGYEYCRIDGSTSHDERVEAIDEYNKPNSEKFIFLLTTRAG 521
LIFSQM+ +LDILED+C GY+Y RIDGS + +R +AID YN P +++F+FLL+TRAG
Sbjct: 960 LIFSQMTMMLDILEDFCDVEGYKYERIDGSITGQQRQDAIDRYNAPGAKQFVFLLSTRAG 1019
Query: 522 GLGINLVTADTVVLYDSDWNPQADLQAMDRAHRIGQKKQVFVYRFVTENAIEEKVIERAA 581
GLGINL TADTV++YDSDWNP D+QA RAHR+GQK +V +YRFVT+ ++EE++ A
Sbjct: 1020 GLGINLATADTVIIYDSDWNPHNDIQAFSRAHRLGQKHKVMIYRFVTKGSVEERITSVAK 1079
Query: 582 QKLRLDQLVIQQGTGKKTSALTNNKDDLIDMIQFGARDMLQ 622
+K+ L LV++ G G K + +K +L D++++G ++ +
Sbjct: 1080 KKMLLTHLVVRAGLGAK-DGKSMSKTELDDVLRWGTEELFK 1119
>Hs4557451 [R] KOG0383 Predicted helicase
Length = 1944
Score = 418 bits (1075), Expect = e-116
Identities = 238/564 (42%), Positives = 344/564 (60%), Gaps = 36/564 (6%)
Query: 128 PSFIKE--GKLRDYQVYGLNWLISLHESKLSGILADEMGLGKTLQSISFLGYLRYIKG-I 184
P FI G L YQ+ GLNWL ILADEMGLGKT+Q+I FL Y Y +G
Sbjct: 726 PRFITATGGTLHMYQLEGLNWLRFSWAQGTDTILADEMGLGKTIQTIVFL-YSLYKEGHT 784
Query: 185 EGPYIVIVPKSTLDNWQREFAKWTPEVKTVILQGDKDFRKELIETKI------------- 231
+GP++V P ST+ NW+REF W P+ V GDKD R + E +
Sbjct: 785 KGPFLVSAPLSTIINWEREFQMWAPKFYVVTYTGDKDSRAIIRENEFSFEDNAIKGGKKA 844
Query: 232 ------LTCNFDVLITSYEMVLKEKLTLKRFAWEYILIDEAHRIKNEQSALSQVIRLFYS 285
F VL+TSYE++ ++ L W +++DEAHR+KN QS +V+ +
Sbjct: 845 FKMKREAQVKFHVLLTSYELITIDQAALGSIRWACLVVDEAHRLKNNQSKFFRVLNGYKI 904
Query: 286 KNRLLITGTPLQNNLHELWALLNFLLPDVFGDSEVFDEWFQQNGKEEDQEVVVQQLHSVL 345
++LL+TGTPLQNNL EL+ LLNFL P+ F + E F E F KE+ +++LH +L
Sbjct: 905 DHKLLLTGTPLQNNLEELFHLLNFLTPERFNNLEGFLEEFADISKEDQ----IKKLHDLL 960
Query: 346 QPFLLRRVKSEVEKSLLPKKEINLYVGMTDMQIEWYKSLLEKDIDAVNGAVGKREGKTRL 405
P +LRR+K++V K++ K E+ + V ++ MQ ++YK +L ++ +A+N G + L
Sbjct: 961 GPHMLRRLKADVFKNMPAKTELIVRVELSPMQKKYYKYILTRNFEALNSRGGGNQ--VSL 1018
Query: 406 LNIVMQLRKCCNHPYLFEGA---EPGPPYTTDEH--LVFNSGKMIVLDKLLKKKKEQGSR 460
LNI+M L+KCCNHPYLF A P P E L+ +SGK+++L K+L+K KEQG R
Sbjct: 1019 LNIMMDLKKCCNHPYLFPVAAMESPKLPSGAYEGGALIKSSGKLMLLQKMLRKLKEQGHR 1078
Query: 461 VLIFSQMSRLLDILEDYCYFRGYEYCRIDGSTSHDERVEAIDEYNKPNSEKFIFLLTTRA 520
VLIFSQM+++LD+LED+ + GY+Y RIDG + R EAID +N P +++F FLL+TRA
Sbjct: 1079 VLIFSQMTKMLDLLEDFLDYEGYKYERIDGGITGALRQEAIDRFNAPGAQQFCFLLSTRA 1138
Query: 521 GGLGINLVTADTVVLYDSDWNPQADLQAMDRAHRIGQKKQVFVYRFVTENAIEEKVIERA 580
GGLGINL TADTV+++DSDWNP D+QA RAHRIGQ +V +YRFVT ++EE++ + A
Sbjct: 1139 GGLGINLATADTVIIFDSDWNPHNDIQAFSRAHRIGQANKVMIYRFVTRASVEERITQVA 1198
Query: 581 AQKLRLDQLVIQQGTGKKTSALTNNKDDLIDMIQFGARDMLQHGSGNITVDEDIDEILKK 640
+K+ L LV++ G G K ++ +K +L D+++FG ++ + + +ED I
Sbjct: 1199 KRKMMLTHLVVRPGLGSKAGSM--SKQELDDILKFGTEELFKDENEGENKEEDSSVIHYD 1256
Query: 641 GERKTLELNAKYESLGLDDLQKFN 664
E L+ ++ D+Q N
Sbjct: 1257 NEAIARLLDRNQDATEDTDVQNMN 1280
>Hs4557453 [R] KOG0383 Predicted helicase
Length = 1912
Score = 417 bits (1071), Expect = e-116
Identities = 231/529 (43%), Positives = 331/529 (61%), Gaps = 38/529 (7%)
Query: 134 GKLRDYQVYGLNWLISLHESKLSGILADEMGLGKTLQSISFLGYLRYIKG-IEGPYIVIV 192
G L YQ+ GLNWL ILADEMGLGKT+Q+ FL Y Y +G +GP++V
Sbjct: 724 GTLHPYQMEGLNWLRFSWAQGTDTILADEMGLGKTVQTAVFL-YSLYKEGHSKGPFLVSA 782
Query: 193 PKSTLDNWQREFAKWTPEVKTVILQGDKDFRKELIET-------------------KILT 233
P ST+ NW+REF W P++ V GDKD R + E K +
Sbjct: 783 PLSTIINWEREFEMWAPDMYVVTYVGDKDSRAIIRENEFSFEDNAIRGGKKASRMKKEAS 842
Query: 234 CNFDVLITSYEMVLKEKLTLKRFAWEYILIDEAHRIKNEQSALSQVIRLFYSKNRLLITG 293
F VL+TSYE++ + L W +++DEAHR+KN QS +V+ + +++LL+TG
Sbjct: 843 VKFHVLLTSYELITIDMAILGSIDWACLIVDEAHRLKNNQSKFFRVLNGYSLQHKLLLTG 902
Query: 294 TPLQNNLHELWALLNFLLPDVFGDSEVFDEWFQQNGKEEDQEVVVQQLHSVLQPFLLRRV 353
TPLQNNL EL+ LLNFL P+ F + E F E F KE+ +++LH +L P +LRR+
Sbjct: 903 TPLQNNLEELFHLLNFLTPERFHNLEGFLEEFADIAKEDQ----IKKLHDMLGPHMLRRL 958
Query: 354 KSEVEKSLLPKKEINLYVGMTDMQIEWYKSLLEKDIDAVNGAVGKREGKTRLLNIVMQLR 413
K++V K++ K E+ + V ++ MQ ++YK +L ++ +A+N G + LLN+VM L+
Sbjct: 959 KADVFKNMPSKTELIVRVELSPMQKKYYKYILTRNFEALNARGGGNQ--VSLLNVVMDLK 1016
Query: 414 KCCNHPYLFEGAEPGPPYTTD-----EHLVFNSGKMIVLDKLLKKKKEQGSRVLIFSQMS 468
KCCNHPYLF A P + L+ SGK+++L K+LK KE G RVLIFSQM+
Sbjct: 1017 KCCNHPYLFPVAAMEAPKMPNGMYDGSALIRASGKLLLLQKMLKNLKEGGHRVLIFSQMT 1076
Query: 469 RLLDILEDYCYFRGYEYCRIDGSTSHDERVEAIDEYNKPNSEKFIFLLTTRAGGLGINLV 528
++LD+LED+ GY+Y RIDG + + R EAID +N P +++F FLL+TRAGGLGINL
Sbjct: 1077 KMLDLLEDFLEHEGYKYERIDGGITGNMRQEAIDRFNAPGAQQFCFLLSTRAGGLGINLA 1136
Query: 529 TADTVVLYDSDWNPQADLQAMDRAHRIGQKKQVFVYRFVTENAIEEKVIERAAQKLRLDQ 588
TADTV++YDSDWNP D+QA RAHRIGQ K+V +YRFVT ++EE++ + A +K+ L
Sbjct: 1137 TADTVIIYDSDWNPHNDIQAFSRAHRIGQNKKVMIYRFVTRASVEERITQVAKKKMMLTH 1196
Query: 589 LVIQQGTGKKTSALTNNKDDLIDMIQFGARDMLQ----HGSGNITVDED 633
LV++ G G KT ++ +K +L D+++FG ++ + G G+ ED
Sbjct: 1197 LVVRPGLGSKTGSM--SKQELDDILKFGTEELFKDEATDGGGDNKEGED 1243
>Hs21914927 [K] KOG0385 Chromatin remodeling complex WSTF-ISWI small subunit
Length = 838
Score = 414 bits (1064), Expect = e-115
Identities = 236/597 (39%), Positives = 351/597 (58%), Gaps = 84/597 (14%)
Query: 126 QSPSFIKEGKLRDYQVYGLNWLISLHESKLSGILADEMGLGKTLQSISFLGYLRYIKGIE 185
Q P G +R YQV G+ WL L E+ ++GILADEMGLGKT+Q I+ + L +G+
Sbjct: 213 QQPKHFTGGVMRWYQVEGMEWLRMLWENGINGILADEMGLGKTVQCIATIA-LMIQRGVP 271
Query: 186 GPYIVIVPKSTLDNWQREFAKWTPEVKTVILQGDKDFRKELIET----KILTCNFDVLIT 241
GP++V P STL NW EF ++TP++ T++ G ++ R++L+ K V+IT
Sbjct: 272 GPFLVCGPLSTLPNWMAEFKRFTPDIPTMLYHGTQEERQKLVRNIYKRKGTLQIHPVVIT 331
Query: 242 SYEMVLKEKLTLKRFAWEYILIDEAHRIKNEQSALSQVIRLFYSKNRLLITGTPLQNNLH 301
S+E+ ++++ L+ W+Y+++DE HRIKN + L + ++ F + N+LL+TGTPLQNNL
Sbjct: 332 SFEIAMRDRNALQHCYWKYLIVDEGHRIKNMKCRLIRELKRFNADNKLLLTGTPLQNNLS 391
Query: 302 ELWALLNFLLPDVFGDSEVFDEWFQQNGKEEDQEVVVQQ---------LHSVLQPFLLRR 352
ELW+LLNFLLPDVF D + F+ WF E E ++ + LH +L PFLLRR
Sbjct: 392 ELWSLLNFLLPDVFDDLKSFESWFDITSLSETAEDIIAKEREQNVLHMLHQILTPFLLRR 451
Query: 353 VKSEVEKSLLPKKEINLYVGMTDMQIEWYKSLLEKDIDAVNGA----------VGKREGK 402
+KS+V + PK+E+ +Y ++ Q +Y +++ + I + G+ G+ + +
Sbjct: 452 LKSDVALEVPPKREVVVYAPLSKKQEIFYTAIVNRTIANMFGSSEKETIELSPTGRPKRR 511
Query: 403 TR----------------------------------------------LLNIVMQLRKCC 416
TR L NI+M LRKCC
Sbjct: 512 TRKSINYSKIDDFPNELEKLISQIQPEVDRERAVVEVNIPVESEVNLKLQNIMMLLRKCC 571
Query: 417 NHPYLFEGAEPGPPYTT----DEHLVFNSGKMIVLDKLLKKKKEQGSRVLIFSQMSRLLD 472
NHPYL E P P T DE LV NSGK ++LD++L + K++G +VL+FSQM+ +LD
Sbjct: 572 NHPYLIE--YPIDPVTQEFKIDEELVTNSGKFLILDRMLPELKKRGHKVLLFSQMTSMLD 629
Query: 473 ILEDYCYFRGYEYCRIDGSTSHDERVEAIDEYNKPNSEKFIFLLTTRAGGLGINLVTADT 532
IL DYC+ R + + R+DGS S+ ER + + +N + E FIFL++TRAGGLGINL ADT
Sbjct: 630 ILMDYCHLRDFNFSRLDGSMSYSEREKNMHSFNT-DPEVFIFLVSTRAGGLGINLTAADT 688
Query: 533 VVLYDSDWNPQADLQAMDRAHRIGQKKQVFVYRFVTENAIEEKVIERAAQKLRLDQLVIQ 592
V++YDSDWNPQ+DLQA DR HRIGQ K V VYR VT N I++K++ERAA K +L++L+I
Sbjct: 689 VIIYDSDWNPQSDLQAQDRCHRIGQTKPVVVYRLVTANTIDQKIVERAAAKRKLEKLIIH 748
Query: 593 QGTGKKTSALTNNKDDLID----MIQFGARDMLQHGSGN---ITVDEDIDEILKKGE 642
+ K + N + +D M +RD + G+ + D+D++ +L + +
Sbjct: 749 KNHFKGGQSGLNLSKNFLDPKELMELLKSRDYEREIKGSREKVISDKDLELLLDRSD 805
>7293795 [R] KOG0383 Predicted helicase
Length = 883
Score = 412 bits (1058), Expect = e-114
Identities = 252/625 (40%), Positives = 363/625 (57%), Gaps = 46/625 (7%)
Query: 128 PSFIKEG--KLRDYQVYGLNWLISLHESKLSGILADEMGLGKTLQSISFLGYLRYIKGIE 185
P F+KE KL +Q+ G++WL + ILADEMGLGKT+Q++ FL L
Sbjct: 257 PVFLKEAGLKLHPFQIEGVSWLRYSWGQGIPTILADEMGLGKTIQTVVFLYSLFKEGHCR 316
Query: 186 GPYIVIVPKSTLDNWQREFAKWTPEVKTVILQGDKDFRK---------ELIETKILTCN- 235
GP+++ VP STL NW+RE W PE+ V G K R E + TK + N
Sbjct: 317 GPFLISVPLSTLTNWERELELWAPELYCVTYVGGKTARAVIRKHEISFEEVTTKTMRENQ 376
Query: 236 ----FDVLITSYEMVLKEKLTLKRFAWEYILIDEAHRIKNEQSALSQVIRLFYSKNRLLI 291
F+V++TSYE + + L W +++DEAHR+++ QS +++ + +LL+
Sbjct: 377 TQYKFNVMLTSYEFISVDAAFLGCIDWAALVVDEAHRLRSNQSKFFRILSKYRIGYKLLL 436
Query: 292 TGTPLQNNLHELWALLNFLLPDVFGDSEVFDEWFQQNGKEEDQEVVVQQLHSVLQPFLLR 351
TGTPLQNNL EL+ LLNFL F D + F F KEE V++LH +L+P +LR
Sbjct: 437 TGTPLQNNLEELFHLLNFLSSGKFNDLQTFQAEFTDVSKEEQ----VKRLHEILEPHMLR 492
Query: 352 RVKSEVEKSLLPKKEINLYVGMTDMQIEWYKSLLEKDIDAVNGAVGKREGKTRLLNIVMQ 411
R+K++V KS+ PK E + V ++ MQ ++YK +L K+ A+N G R LLNI+M
Sbjct: 493 RLKADVLKSMPPKSEFIVRVELSSMQKKFYKHILTKNFKALNQKGGGRV--CSLLNIMMD 550
Query: 412 LRKCCNHPYLFEGA------EPGPPYTTDEHLVFNSGKMIVLDKLLKKKKEQGSRVLIFS 465
LRKCCNHPYLF A P Y L SGK+ +L K+LK+ K RVL+FS
Sbjct: 551 LRKCCNHPYLFPSAAEEATISPSGLYEMSS-LTKASGKLDLLSKMLKQLKADNHRVLLFS 609
Query: 466 QMSRLLDILEDYCYFRGYEYCRIDGSTSHDERVEAIDEYNKPNSEKFIFLLTTRAGGLGI 525
QM+++L++LE + GY+Y RIDGS D R +AID +N P SE F+FLL+TRAGGLGI
Sbjct: 610 QMTKMLNVLEHFLEGEGYQYDRIDGSIKGDLRQKAIDRFNDPVSEHFVFLLSTRAGGLGI 669
Query: 526 NLVTADTVVLYDSDWNPQADLQAMDRAHRIGQKKQVFVYRFVTENAIEEKVIERAAQKLR 585
NL TADTV+++DSDWNP D+QA RAHR+GQKK+V +YRFVT N++EE++++ A K+
Sbjct: 670 NLATADTVIIFDSDWNPHNDVQAFSRAHRMGQKKKVMIYRFVTHNSVEERIMQVAKHKMM 729
Query: 586 LDQLVIQQGTGKKTSALTNNKDDLIDMIQFGARDMLQHGSGNIT--VDEDIDEILKKGER 643
L LV++ G G T+ +KD+L D+++FG D+ + G D+ + ++L + R
Sbjct: 730 LTHLVVRPGMGGMTTNF--SKDELEDILRFGTEDLFKDGKSEAIHYDDKAVADLLDRTNR 787
Query: 644 KTLELNAKYESLGLDDLQKFNGMADQSAYEWNGTNFEKKKPDDHTVDWIN--PPKRERRR 701
E ES + L F ++Y T + ++ DD+ D N P E
Sbjct: 788 GIEE----KESWANEYLSSFK----VASY---ATKEDHEEHDDYNNDAENTDPFYWENLM 836
Query: 702 EQPLYSVDDYYREVIGNGKSKPSGS 726
+ + +V RE G G++ P G+
Sbjct: 837 GKTVAAVPGGRREHHGKGQANPKGN 861
>Hs22047300 [K] KOG0384 Chromodomain-helicase DNA-binding protein
Length = 1970
Score = 410 bits (1055), Expect = e-114
Identities = 233/556 (41%), Positives = 347/556 (61%), Gaps = 40/556 (7%)
Query: 127 SPSFIKEGKLRDYQVYGLNWLISLHESKLSGILADEMGLGKTLQSISFLGYLRYIKGIEG 186
S + KLR+YQ+ G+NWL+ + + ILADEMGLGKT+QSI+FL Y Y+KGI G
Sbjct: 390 SREYKNNNKLREYQLEGVNWLLFNWYNMRNCILADEMGLGKTIQSITFL-YEIYLKGIHG 448
Query: 187 PYIVIVPKSTLDNWQREFAKWTPEVKTVILQGDKDFRKELIETKIL-----------TCN 235
P++VI P ST+ NW+REF WT E+ V+ G + R+ + ++ +
Sbjct: 449 PFLVIAPLSTIPNWEREFRTWT-ELNVVVYHGSQASRRTIQLYEMYFKDPQGRVIKGSYK 507
Query: 236 FDVLITSYEMVLKEKLTLKRFAWEYILIDEAHRIKNEQSALSQVIRLFYSKNRLLITGTP 295
F +IT++EM+L + L+ W ++IDEAHR+KN L + +++ ++++L+TGTP
Sbjct: 508 FHAIITTFEMILTDCPELRNIPWRCVVIDEAHRLKNRNCKLLEGLKMMDLEHKVLLTGTP 567
Query: 296 LQNNLHELWALLNFLLPDVFGDSEVFDEWFQQNGKEEDQEVVVQQLHSVLQPFLLRRVKS 355
LQN + EL++LL+FL P F F + F EE VQ+L ++L+P +LRR+K
Sbjct: 568 LQNTVEELFSLLHFLEPSRFPSETTFMQEFGDLKTEEQ----VQKLQAILKPMMLRRLKE 623
Query: 356 EVEKSLLPKKEINLYVGMTDMQIEWYKSLLEKDIDAVNGAVGKREGKTRLLNIVMQLRKC 415
+VEK+L PK+E + V +T++Q ++Y+++LEK+ ++ G + LLN +M+LRKC
Sbjct: 624 DVEKNLAPKEETIIEVELTNIQKKYYRAILEKNFTFLSKG-GGQANVPNLLNTMMELRKC 682
Query: 416 CNHPYLFEGAEPG------------PPYTTDEHLVFNSGKMIVLDKLLKKKKEQGSRVLI 463
CNHPYL GAE P + ++ +GK++++DKLL K K G RVLI
Sbjct: 683 CNHPYLINGAEEKILEEFKETHNAESPDFQLQAMIQAAGKLVLIDKLLPKLKAGGHRVLI 742
Query: 464 FSQMSRLLDILEDYCYFRGYEYCRIDGSTSHDERVEAIDEYNKPNSEKFIFLLTTRAGGL 523
FSQM R LDILEDY R Y Y RIDG + R AID ++KP+S++F+FLL TRAGGL
Sbjct: 743 FSQMVRCLDILEDYLIQRRYPYERIDGRVRGNLRQAAIDRFSKPDSDRFVFLLCTRAGGL 802
Query: 524 GINLVTADTVVLYDSDWNPQADLQAMDRAHRIGQKKQVFVYRFVTENAIEEKVIERAAQK 583
GINL ADT +++DSDWNPQ DLQA R HRIGQ K V +YR +T N+ E ++ ++A+ K
Sbjct: 803 GINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQSKSVKIYRLITRNSYEREMFDKASLK 862
Query: 584 LRLDQLVIQQGTGKKTSALTN-----NKDDLIDMIQFGARDML--QHGSGNITVDEDIDE 636
L LD+ V+Q +G++ + TN +K ++ D+++ GA L + G+ +EDID+
Sbjct: 863 LGLDKAVLQSMSGRENA--TNGVQQLSKKEIEDLLRKGAYGALMDEEDEGSKFCEEDIDQ 920
Query: 637 I-LKKGERKTLELNAK 651
I L++ T+E K
Sbjct: 921 ILLRRTHTITIESEGK 936
>At2g28290 [BK] KOG0386 Chromatin remodeling complex SWI/SNF component SWI2 and
related ATPases (DNA/RNA helicase superfamily)
Length = 1339
Score = 410 bits (1054), Expect = e-114
Identities = 234/560 (41%), Positives = 333/560 (58%), Gaps = 50/560 (8%)
Query: 126 QSPSFIKEGKLRDYQVYGLNWLISLHESKLSGILADEMGLGKTLQS--------ISFLGY 177
+ PS + GKLR+YQ+ GL WL+SL+ + L+GILADEMGLGKT+Q IS + Y
Sbjct: 783 EQPSSLVGGKLREYQMNGLRWLVSLYNNHLNGILADEMGLGKTVQMGLGKTVQVISLICY 842
Query: 178 LRYIKGIEGPYIVIVPKSTLDNWQREFAKWTPEVKTVILQGDKDFRKELIETKILTCNFD 237
L K GP++V+VP S L WQ E W P + ++ G D R++L + +I+ F+
Sbjct: 843 LMETKNDRGPFLVVVPSSVLPGWQSEINFWAPSIHKIVYCGTPDERRKLFKEQIVHQKFN 902
Query: 238 VLITSYEMVLK--EKLTLKRFAWEYILIDEAHRIKNEQSALSQVIRLFYSKNRLLITGTP 295
VL+T+YE ++ ++ L + W YI+IDE HRIKN L+ ++ + S +RLL+TGTP
Sbjct: 903 VLLTTYEYLMNKHDRPKLSKIHWHYIIIDEGHRIKNASCKLNADLKHYVSSHRLLLTGTP 962
Query: 296 LQNNLHELWALLNFLLPDVFGDSEVFDEWF----QQNGK------EEDQEVVVQQLHSVL 345
LQNNL ELWALLNFLLP++F SE F +WF Q NG+ EE+ +++ +LH VL
Sbjct: 963 LQNNLEELWALLNFLLPNIFNSSEDFSQWFNKPFQSNGESSALLSEEENLLIINRLHQVL 1022
Query: 346 QPFLLRRVKSEVEKSLLPKKEINLYVGMTDMQIEWYKSLLEKDIDAVNGAVGKREGKTRL 405
+PF+LRR+K +VE L K E + + Y+ LL K ++ G++G + + +
Sbjct: 1023 RPFVLRRLKHKVENELPEKIE-----RLIRCEASAYQKLLMKRVEDNLGSIGNAKSRA-V 1076
Query: 406 LNIVMQLRKCCNHPYLFEGAEPGPPYTTDEH----LVFNSGKMIVLDKLLKKKKEQGSRV 461
N VM+LR CNHPYL + ++EH +V GK+ +LD++L K K RV
Sbjct: 1077 HNSVMELRNICNHPYLSQ-------LHSEEHFLPPIVRLCGKLEMLDRMLPKLKATDHRV 1129
Query: 462 LIFSQMSRLLDILEDYCYFRGYEYCRIDGSTSHDERVEAIDEYNKPNSEKFIFLLTTRAG 521
L FS M+RLLD++EDY +GY+Y R+DG TS +R ID +NK S FIFLL+ RAG
Sbjct: 1130 LFFSTMTRLLDVMEDYLTLKGYKYLRLDGQTSGGDRGALIDGFNKSGSPFFIFLLSIRAG 1189
Query: 522 GLGINLVTADTVVLYDSDWNPQADLQAMDRAHRIGQKKQVFVYRFVTENAIEEKVIERAA 581
G+G+NL ADTV+L+D+DWNPQ DLQA RAHRIGQKK V V RF T N++EE+V A
Sbjct: 1190 GVGVNLQAADTVILFDTDWNPQVDLQAQARAHRIGQKKDVLVLRFETVNSVEEQVRASAE 1249
Query: 582 QKLRLDQLVIQQGTGKKTSALTNNKDDLIDMIQFGAR-------------DMLQHGSGNI 628
KL + I G ++ + K+ L +++ + D++ I
Sbjct: 1250 HKLGVANQSITAGFFDNNTSAEDRKEYLESLLRESKKEEDAPVLDDDALNDLIARRESEI 1309
Query: 629 TVDEDIDEILKKGERKTLEL 648
+ E ID+ K+ E L L
Sbjct: 1310 DIFESIDKQRKENEMVCLFL 1329
>Hs21362042 [K] KOG0384 Chromodomain-helicase DNA-binding protein
Length = 2713
Score = 409 bits (1050), Expect = e-113
Identities = 229/558 (41%), Positives = 346/558 (61%), Gaps = 37/558 (6%)
Query: 126 QSPSFIKEGKLRDYQVYGLNWLISLHESKLSGILADEMGLGKTLQSISFLGYLRYIKGIE 185
+S + +LR+YQ+ G+NWL+ ++ + ILADEMGLGKT+QSI+FL + +++GI
Sbjct: 449 KSREYKNSNQLREYQLEGMNWLLFNWYNRKNCILADEMGLGKTIQSITFLSEI-FLRGIH 507
Query: 186 GPYIVIVPKSTLDNWQREFAKWTPEVKTVILQGDKDFRKELIETKIL-----------TC 234
GP+++I P ST+ NW+REF WT E+ ++ G + R+ + + +++
Sbjct: 508 GPFLIIAPLSTITNWEREFRTWT-EMNAIVYHGSQISRQMIQQYEMVYRDAQGNPLSGVF 566
Query: 235 NFDVLITSYEMVLKEKLTLKRFAWEYILIDEAHRIKNEQSALSQVIRLFYSKNRLLITGT 294
F V+IT++EM+L + LK+ W ++IDEAHR+KN L + ++L ++++L+TGT
Sbjct: 567 KFHVVITTFEMILADCPELKKIHWSCVIIDEAHRLKNRNCKLLEGLKLMALEHKVLLTGT 626
Query: 295 PLQNNLHELWALLNFLLPDVFGDSEVFDEWFQQNGKEEDQEVVVQQLHSVLQPFLLRRVK 354
PLQN++ EL++LLNFL P F F E F EE V++L S+L+P +LRR+K
Sbjct: 627 PLQNSVEELFSLLNFLEPSQFPSETAFLEEFGDLKTEEQ----VKKLQSILKPMMLRRLK 682
Query: 355 SEVEKSLLPKKEINLYVGMTDMQIEWYKSLLEKDIDAVNGAVGKREGKTRLLNIVMQLRK 414
+VEK+L PK+E + V +T++Q ++Y+++LEK+ + + L+N +M+LRK
Sbjct: 683 DDVEKNLAPKQETIIEVELTNIQKKYYRAILEKNFSFLTKGANQHN-MPNLINTMMELRK 741
Query: 415 CCNHPYLFEGAE------------PGPPYTTDEHLVFNSGKMIVLDKLLKKKKEQGSRVL 462
CCNHPYL GAE P P + ++ +GK++++DKLL K G +VL
Sbjct: 742 CCNHPYLINGAEEKILEDFRKTHSPDAPDFQLQAMIQAAGKLVLIDKLLPKLIAGGHKVL 801
Query: 463 IFSQMSRLLDILEDYCYFRGYEYCRIDGSTSHDERVEAIDEYNKPNSEKFIFLLTTRAGG 522
IFSQM R LDILEDY R Y Y RIDG + R AID + KP+S++F+FLL TRAGG
Sbjct: 802 IFSQMVRCLDILEDYLIQRRYTYERIDGRVRGNLRQAAIDRFCKPDSDRFVFLLCTRAGG 861
Query: 523 LGINLVTADTVVLYDSDWNPQADLQAMDRAHRIGQKKQVFVYRFVTENAIEEKVIERAAQ 582
LGINL ADT +++DSDWNPQ DLQA R HRIGQ K V VYR +T N+ E ++ ++A+
Sbjct: 862 LGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQSKAVKVYRLITRNSYEREMFDKASL 921
Query: 583 KLRLDQLVIQ--QGTGKKTSALTNNKDDLIDMIQFGARDML--QHGSGNITVDEDIDEIL 638
KL LD+ V+Q G +K ++ D+++ GA L + G+ +EDID+IL
Sbjct: 922 KLGLDKAVLQDINRKGGTNGVQQLSKMEVEDLLRKGAYGALMDEEDEGSKFCEEDIDQIL 981
Query: 639 KKGERKTLELNAKYESLG 656
+R+T + + E G
Sbjct: 982 ---QRRTHTITIQSEGKG 996
>Hs22047966 [K] KOG0384 Chromodomain-helicase DNA-binding protein
Length = 1953
Score = 406 bits (1043), Expect = e-112
Identities = 235/559 (42%), Positives = 344/559 (61%), Gaps = 40/559 (7%)
Query: 127 SPSFIKEGKLRDYQVYGLNWLISLHESKLSGILADEMGLGKTLQSISFLGYLRYIKGIEG 186
S + +LR+YQ+ G+NWL+ ++ + ILADEMGLGKT+QSI+FL + Y GI G
Sbjct: 174 SHEYKNRNQLREYQLEGVNWLLFNWYNRQNCILADEMGLGKTIQSIAFLQEV-YNVGIHG 232
Query: 187 PYIVIVPKSTLDNWQREFAKWTPEVKTVILQGDKDFRKELIETKILTCN----------- 235
P++VI P ST+ NW+REF WT E+ T++ G R ++I+ + C
Sbjct: 233 PFLVIAPLSTITNWEREFNTWT-EMNTIVYHGSLASR-QMIQQYEMYCKDSRGRLIPGAY 290
Query: 236 -FDVLITSYEMVLKEKLTLKRFAWEYILIDEAHRIKNEQSALSQVIRLFYSKNRLLITGT 294
FD LIT++EM+L + L+ W ++IDEAHR+KN L ++ ++++L+TGT
Sbjct: 291 KFDALITTFEMILSDCPELREIEWRCVIIDEAHRLKNRNCKLLDSLKHMDLEHKVLLTGT 350
Query: 295 PLQNNLHELWALLNFLLPDVFGDSEVFDEWFQQNGKEEDQEVVVQQLHSVLQPFLLRRVK 354
PLQN + EL++LL+FL P F F + F EE VQ+L ++L+P +LRR+K
Sbjct: 351 PLQNTVEELFSLLHFLEPSQFPSESEFLKDFGDLKTEEQ----VQKLQAILKPMMLRRLK 406
Query: 355 SEVEKSLLPKKEINLYVGMTDMQIEWYKSLLEKDIDAVNGAVGKREGKTRLLNIVMQLRK 414
+VEK+L PK+E + V +T++Q ++Y+++LEK+ ++ G LLN +M+LRK
Sbjct: 407 EDVEKNLAPKQETIIEVELTNIQKKYYRAILEKNFSFLSKGAG-HTNMPNLLNTMMELRK 465
Query: 415 CCNHPYLFEGAEPG------------PPYTTDEHLVFNSGKMIVLDKLLKKKKEQGSRVL 462
CCNHPYL GAE P + +V ++GK++++DKLL K K G +VL
Sbjct: 466 CCNHPYLINGAEEKILTEFREACHIIPHDFHLQAMVRSAGKLVLIDKLLPKLKAGGHKVL 525
Query: 463 IFSQMSRLLDILEDYCYFRGYEYCRIDGSTSHDERVEAIDEYNKPNSEKFIFLLTTRAGG 522
IFSQM R LDILEDY R Y Y RIDG + R AID ++KP+S++F+FLL TRAGG
Sbjct: 526 IFSQMVRCLDILEDYLIQRRYLYERIDGRVRGNLRQAAIDRFSKPDSDRFVFLLCTRAGG 585
Query: 523 LGINLVTADTVVLYDSDWNPQADLQAMDRAHRIGQKKQVFVYRFVTENAIEEKVIERAAQ 582
LGINL ADT +++DSDWNPQ DLQA R HRIGQ K V VYR +T N+ E ++ ++A+
Sbjct: 586 LGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQSKAVKVYRLITRNSYEREMFDKASL 645
Query: 583 KLRLDQLVIQQGTGKK---TSALTNNKDDLIDMIQFG--ARDMLQHGSGNITVDEDIDEI 637
KL LD+ V+Q +G+ T +K ++ D+++ G A M + G+ +EDID+I
Sbjct: 646 KLGLDKAVLQSMSGRDGNITGIQQFSKKEIEDLLRKGAYAAIMEEDDEGSKFCEEDIDQI 705
Query: 638 LKKGERKTLELNAKYESLG 656
L R+T + + E G
Sbjct: 706 LL---RRTTTITIESEGKG 721
>CE18196 [K] KOG0384 Chromodomain-helicase DNA-binding protein
Length = 2957
Score = 399 bits (1024), Expect = e-110
Identities = 242/631 (38%), Positives = 369/631 (58%), Gaps = 59/631 (9%)
Query: 136 LRDYQVYGLNWLISLHESKLSGILADEMGLGKTLQSISFLGYLRYIKGIEGPYIVIVPKS 195
LR+YQ G++WL+ + + + ILADEMGLGKT+Q+I+FL + Y GI GP++V+VP S
Sbjct: 1187 LREYQFEGVDWLLYCYYNAQNCILADEMGLGKTVQTITFLSRI-YDYGIHGPFLVVVPLS 1245
Query: 196 TLDNWQREFAKWTPEVKTVILQGDKDFRKELIETKILT--------------CNFDVLIT 241
T+ NW REF WT ++ ++ G R+ L + ++ D LIT
Sbjct: 1246 TIQNWVREFETWT-DMNAIVYHGSAYAREVLQQYEVFYDKRHCGAKNWKKNFVKIDALIT 1304
Query: 242 SYEMVLKEKLTLKRFAWEYILIDEAHRIKNEQ-SALSQVIRLFYSKNRLLITGTPLQNNL 300
++E V+ + LK+ W +IDEAHR+KN L + F ++R+L+TGTPLQNN+
Sbjct: 1305 TFETVVSDVEFLKKIPWRVCVIDEAHRLKNRNCKLLVNGLLAFRMEHRVLLTGTPLQNNI 1364
Query: 301 HELWALLNFLLPDVFGDSEVFDEWFQQNGKEEDQEVVVQQLHSVLQPFLLRRVKSEVEKS 360
EL++LLNFL P F +S F E F + + +DQ VQ+L +L+P +LRR+K +VEKS
Sbjct: 1365 DELFSLLNFLHPQQFDNSATFLEQFG-SCQTDDQ---VQKLQEILKPMMLRRLKEDVEKS 1420
Query: 361 LLPKKEINLYVGMTDMQIEWYKSLLEKDIDAVNGAVGKREGKTRLLNIVMQLRKCCNHPY 420
L PK+E + V ++DMQ ++Y+++LE++ + K L+N++M+LRKCCNHP+
Sbjct: 1421 LGPKEETIIEVQLSDMQKKFYRAILERNFSHLC----KGTSAPSLMNVMMELRKCCNHPF 1476
Query: 421 LFEGAEPG---------PPYTTD----EHLVFNSGKMIVLDKLLKKKKEQGSRVLIFSQM 467
L GAE P + + + L+ SGK+++++KLL K ++ G +VLIFSQM
Sbjct: 1477 LINGAEEAIMNDFRLAHPDWDEETLAHKALIQASGKVVLIEKLLPKLRKDGHKVLIFSQM 1536
Query: 468 SRLLDILEDYCYFRGYEYCRIDGSTSHDERVEAIDEYNKPNSEKFIFLLTTRAGGLGINL 527
++LD+LE++ Y + RIDG+ D R AID ++K NS++F+FLL TRAGGLGINL
Sbjct: 1537 VKVLDLLEEFLISMSYPFERIDGNVRGDLRQAAIDRFSKENSDRFVFLLCTRAGGLGINL 1596
Query: 528 VTADTVVLYDSDWNPQADLQAMDRAHRIGQKKQVFVYRFVTENAIEEKVIERAAQKLRLD 587
ADTV+++DSDWNPQ DLQA R HRIGQKK V VYR +T N E ++ ++A+ KL LD
Sbjct: 1597 TAADTVIIFDSDWNPQNDLQAQARCHRIGQKKLVKVYRLITSNTYEREMFDKASLKLGLD 1656
Query: 588 QLVIQQGTGKKTSALTNNKDDLIDMIQFGARD--MLQHGSGNITVDEDIDEILKK----- 640
+ V+Q T K +K D+ ++++ GA M + + +EDI+ IL++
Sbjct: 1657 KAVLQSTTALKAEGTALSKKDVEELLKKGAYGSIMDEENESSKFNEEDIETILQRRTQTI 1716
Query: 641 ----GERKTLELNAKYES-------LGLDDLQKFNGMADQSAYEWNGTNFEKKKPDDHTV 689
G++ +L A + S + +DD + + A+++ + PD +
Sbjct: 1717 TLEAGQKGSLFAKATFNSSHNKGDDIDIDDPEFWTKWAEKAQVD---VEKATATPDGREL 1773
Query: 690 DWINPPKRERRREQPLYSVDDYYREVIGNGK 720
P KR +R E+ D E GN K
Sbjct: 1774 IIEEPRKRTKRFEENKDEGDSDGSEESGNRK 1804
>At2g25170 [R] KOG0383 Predicted helicase
Length = 1359
Score = 395 bits (1014), Expect = e-109
Identities = 228/540 (42%), Positives = 323/540 (59%), Gaps = 46/540 (8%)
Query: 133 EGKLRDYQVYGLNWLISLHESKLSGILADEMGLGKTLQSISFLGYLRYIKGIEGPYIVIV 192
EG L YQ+ GLN+L + ILADEMGLGKT+QSI+ L L I P++VI
Sbjct: 270 EGLLHPYQLEGLNFLRFSWSKQTHVILADEMGLGKTIQSIALLASLFEENLI--PHLVIA 327
Query: 193 PKSTLDNWQREFAKWTPEVKTVILQGDKDFRKEL-----------------------IET 229
P STL NW+REFA W P++ V+ G R + E+
Sbjct: 328 PLSTLRNWEREFATWAPQMNVVMYFGTAQARAVIREHEFYLSKDQKKIKKKKSGQISSES 387
Query: 230 KILTCNFDVLITSYEMVLKEKLTLKRFAWEYILIDEAHRIKNEQSALSQVIRLFYSKNRL 289
K FDVL+TSYEM+ + LK WE +++DE HR+KN+ S L + + S +R+
Sbjct: 388 KQKRIKFDVLLTSYEMINLDSAVLKPIKWECMIVDEGHRLKNKDSKLFSSLTQYSSNHRI 447
Query: 290 LITGTPLQNNLHELWALLNFLLPDVFGDSEVFDEWFQQNGKEEDQEVVVQQLHSVLQPFL 349
L+TGTPLQNNL EL+ L++FL FG E F E F K+ +QE + +LH +L P L
Sbjct: 448 LLTGTPLQNNLDELFMLMHFLDAGKFGSLEEFQEEF----KDINQEEQISRLHKMLAPHL 503
Query: 350 LRRVKSEVEKSLLPKKEINLYVGMTDMQIEWYKSLLEKDIDAVNGAVGKREGKTRLLNIV 409
LRRVK +V K + PKKE+ L V ++ +Q E+YK++ ++ + G + L NI+
Sbjct: 504 LRRVKKDVMKDMPPKKELILRVDLSSLQKEYYKAIFTRNYQVLTKKGG---AQISLNNIM 560
Query: 410 MQLRKCCNHPYLFEGAEPGPPYTTD--EHLVFNSGKMIVLDKLLKKKKEQGSRVLIFSQM 467
M+LRK C HPY+ EG EP + + L+ + GK+ +LDK++ K KEQG RVLI++Q
Sbjct: 561 MELRKVCCHPYMLEGVEPVIHDANEAFKQLLESCGKLQLLDKMMVKLKEQGHRVLIYTQF 620
Query: 468 SRLLDILEDYCYFRGYEYCRIDGSTSHDERVEAIDEYNKPNSEKFIFLLTTRAGGLGINL 527
+LD+LEDYC + ++Y RIDG ER ID +N NS KF FLL+TRAGGLGINL
Sbjct: 621 QHMLDLLEDYCTHKKWQYERIDGKVGGAERQIRIDRFNAKNSNKFCFLLSTRAGGLGINL 680
Query: 528 VTADTVVLYDSDWNPQADLQAMDRAHRIGQKKQVFVYRFVTENAIEEKVIERAAQKLRLD 587
TADTV++YDSDWNP ADLQAM RAHR+GQ +V +YR + IEE++++ +K+ L+
Sbjct: 681 ATADTVIIYDSDWNPHADLQAMARAHRLGQTNKVMIYRLINRGTIEERMMQLTKKKMVLE 740
Query: 588 QLVIQQGTGKKTSALTNNKDDLIDMIQFGARDMLQH------GSGNITVDE-DIDEILKK 640
LV+ K N+++L D+I++G++++ SG I D+ ID++L +
Sbjct: 741 HLVV-----GKLKTQNINQEELDDIIRYGSKELFASEDDEAGKSGKIHYDDAAIDKLLDR 795
>Hs20536191 [K] KOG0385 Chromatin remodeling complex WSTF-ISWI small subunit
Length = 897
Score = 394 bits (1012), Expect = e-109
Identities = 227/512 (44%), Positives = 317/512 (61%), Gaps = 14/512 (2%)
Query: 136 LRDYQVYGLNWLISLHESKLSGILADEMGLGKTLQSISFLGYLRYIKGIEGPYIVIVPKS 195
LR YQ+ G+NWL + IL DEMGLGKT Q+I+ YL EGP++++ P S
Sbjct: 46 LRSYQLEGVNWLAQRFHCQNGCILGDEMGLGKTCQTIALFIYLAGRLNDEGPFLILCPLS 105
Query: 196 TLDNWQREFAKWTPEVKTVILQGDKDFRKELIETKILTCNFDVLITSYEMVLKEKLTLKR 255
L NW+ E ++ P + V GDK+ R L + F VL+T+YE+ LK+ LK
Sbjct: 106 VLSNWKEEMQRFAPGLSCVTYAGDKEERACLQQDLKQESRFHVLLTTYEICLKDASFLKS 165
Query: 256 FAWEYILIDEAHRIKNEQSALSQVIRLFYSKNRLLITGTPLQNNLHELWALLNFLLPDVF 315
F W +++DEAHR+KN+ S L + + F LL+TGTP+QN+L EL++LL+F+ PD+F
Sbjct: 166 FPWSVLVVDEAHRLKNQSSLLHKTLSEFSVVFSLLLTGTPIQNSLQELYSLLSFVEPDLF 225
Query: 316 GDSEVFDEWFQQNGKEEDQEVVVQQLHSVLQPFLLRRVKSEVEKSLLPKKEINLYVGMTD 375
EV D + Q+ E + +LH +LQPFLLRRVK+EV L K E+ +Y GM+
Sbjct: 226 SKEEVGD-FIQRYQDIEKESESGNELHKLLQPFLLRRVKAEVATELPKKTEVVIYHGMSA 284
Query: 376 MQIEWYKSLLEKDIDAVNGAVGKREGKTRLLNIVMQLRKCCNHPYLFEGAEPGPPYTTDE 435
+Q ++YK++L KD+DA K K +L NI+ QLRKC +HPYLF+G EP P+ +
Sbjct: 285 LQKKYYKAILMKDLDAFENETAK---KVKLQNILSQLRKCVDHPYLFDGVEP-EPFEVGD 340
Query: 436 HLVFNSGKMIVLDKLLKKKKEQGSRVLIFSQMSRLLDILEDYCYFRGYEYCRIDGSTSHD 495
HL SGK+ +LDKLL G RVL+FSQM+++LDIL+DY +RGY Y R+DGS +
Sbjct: 341 HLTEASGKLHLLDKLLAFLYSGGHRVLLFSQMTQMLDILQDYMDYRGYSYERVDGSVRGE 400
Query: 496 ERVEAIDEYNKPNSEKFIFLLTTRAGGLGINLVTADTVVLYDSDWNPQADLQAMDRAHRI 555
ER AI + + F+FLL+TRAGG+G+NL ADTV+ DSD+NPQ DLQA RAHRI
Sbjct: 401 ERHLAIKNFGQ--QPIFVFLLSTRAGGVGMNLTAADTVIFVDSDFNPQNDLQAAARAHRI 458
Query: 556 GQKKQVFVYRFVTENAIEEKVIERAAQKLRLDQLVIQQG--TGKKTSALTNNKDDLIDMI 613
GQ K V V R + + +EE V +AA KL+L ++I+ G T + L +++
Sbjct: 459 GQNKSVKVIRLIGRDTVEEIVYRKAASKLQLTNMIIEGGHFTLGAQKPAADADLQLSEIL 518
Query: 614 QFGARDMLQHGSGNITVDE-DIDEILKKGERK 644
+FG +L S T+DE D++ IL GE K
Sbjct: 519 KFGLDKLL--ASEGSTMDEIDLESIL--GETK 546
>ECU01g0350 [K] KOG0384 Chromodomain-helicase DNA-binding protein
Length = 1251
Score = 377 bits (968), Expect = e-104
Identities = 223/571 (39%), Positives = 334/571 (58%), Gaps = 68/571 (11%)
Query: 126 QSPSFIKEGKLRDYQVYGLNWLISLHESKLSGILADEMGLGKTLQSISFLGYLRYIKGIE 185
+SP F +LR+YQ+ GLNWL++ K S I+ADEMGLGKT+QS++F+ L
Sbjct: 292 ESPVFKGGNRLREYQLEGLNWLLNRWYYKQSCIMADEMGLGKTVQSVTFINTLFTKYDYC 351
Query: 186 GPYIVIVPKSTLDNWQREFAKWTP----------EVKTVILQGDKDFRKELIETKILTCN 235
P +V+ P S + +W+REF WT + +I + + +K +E ++
Sbjct: 352 APVLVVTPLSIIPHWEREFEAWTDLRVLKYHENRPGRALIAEYEFVLKKNNLEIRL---- 407
Query: 236 FDVLITSYEMVLKEKLTLKRFAWEYILIDEAHRIKNEQSALSQVIRLFYSKNRLLITGTP 295
FDVLIT+Y+ V+ E+ L +F + + DEAHR+KN +S + ++R +++L++GTP
Sbjct: 408 FDVLITTYDTVMAEQEHLSQFHFSVGIFDEAHRLKNAKSKAATILRTLKFNHKVLLSGTP 467
Query: 296 LQNNLHELWALLNFLLPDVFGDSEVFDEWFQQNGKEEDQEVVVQQLHSVLQPFLLRRVKS 355
LQNN+ ELW+LLNF+ P F F F+ + V++L +L+P +LRR+K
Sbjct: 468 LQNNISELWSLLNFIDPMRFSSLPHFLGEFKMENIND-----VEKLQGLLRPLMLRRMKE 522
Query: 356 EVEKSLLPKKEINLYVGMTDMQIEWYKSLLEKDIDAVNGAVGKREGKTRLLNIVMQLRKC 415
+VEKS+ K+E + V +T +Q +Y+++LEK+I+ + G +E LLN++M+LRKC
Sbjct: 523 DVEKSIPTKEETIIEVALTMIQKRFYRAILEKNIEFLTK--GGKESAPNLLNVMMELRKC 580
Query: 416 CNHPYLFEGAEP--------------------------GPPYTTDEH------------- 436
C HPYL +GAE DEH
Sbjct: 581 CIHPYLIKGAEEQILSGYLKKKRERSKAEGAENDITLTSEVLNEDEHQDGNSVISDIDEY 640
Query: 437 ---LVFNSGKMIVLDKLLKKKKEQGSRVLIFSQMSRLLDILEDYCYFRGYEYCRIDGSTS 493
+ +SGK+++LDKLL K K+ G +VLIFSQM+R LD+L +Y +R Y+Y RIDG
Sbjct: 641 YKIFIQSSGKLVLLDKLLGKLKD-GHKVLIFSQMTRCLDLLAEYLAYRKYKYERIDGGAR 699
Query: 494 HDERVEAIDEYNKPNSEKFIFLLTTRAGGLGINLVTADTVVLYDSDWNPQADLQAMDRAH 553
+ R AID ++ S+ F+FLL+TRAGG+GINL ADTV+++DSDWNPQ DLQA R H
Sbjct: 700 TENRQAAIDRFSDKTSDVFVFLLSTRAGGVGINLTAADTVIIFDSDWNPQNDLQAQARCH 759
Query: 554 RIGQKKQVFVYRFVTENAIEEKVIERAAQKLRLDQLVIQQGT-GKKTSALTNNKDDLIDM 612
RIGQ +V VYR VTEN E ++ ++A KL LD+ V+Q+ T ++ S T KD + +
Sbjct: 760 RIGQTSEVKVYRLVTENTYEREMFDKAGLKLGLDRAVLQKMTFEEQKSEKTRKKDAIETL 819
Query: 613 IQFGARDMLQH---GSGNITVDEDIDEILKK 640
++ GA +L S +EDID+IL++
Sbjct: 820 LRKGAYGVLMETDDASSRKFCEEDIDQILER 850
>YFR038w [K] KOG0385 Chromatin remodeling complex WSTF-ISWI small subunit
Length = 778
Score = 369 bits (947), Expect = e-101
Identities = 216/571 (37%), Positives = 319/571 (55%), Gaps = 85/571 (14%)
Query: 126 QSPSFIKEGKLRDYQVYGLNWLISLHESKLSGILADEMGLGKTLQSISFLGYLRYIKGIE 185
+ P +K L+ YQ+ GLNWLI+L+E+ L+GILADEMGLGKT+QSI+ L ++ Y +
Sbjct: 212 KQPRLLKNCILKPYQLEGLNWLITLYENGLNGILADEMGLGKTVQSIALLAFI-YEMDTK 270
Query: 186 GPYIVIVPKSTLDNWQREFAKWTPEVKTVILQGDKDFRKELIETKILTCNF-------DV 238
GP++V P STLDNW EFAK+ P++ + G +++ + K NF +
Sbjct: 271 GPFLVTAPLSTLDNWMNEFAKFAPDLPVLKYYGTNGYKERSAKLK----NFFKQHGGTGI 326
Query: 239 LITSYEMVLKEKLTLKRFAWEYILIDEAHRIKNEQSALSQVIRLFYSKNRLLITGTPLQN 298
+ITSYE++L++ + W+++++DE HR+KN L + ++ + NRLL+TGTPLQN
Sbjct: 327 VITSYEIILRDTDLIMSQNWKFLIVDEGHRLKNINCRLIKELKKINTSNRLLLTGTPLQN 386
Query: 299 NLHELWALLNFLLPDVFGDSEVFDEWFQQNG----------------KEEDQEVVVQQLH 342
NL ELW+LLNF++PD+F D E+F++WF + +E Q+ ++ LH
Sbjct: 387 NLAELWSLLNFIMPDIFADFEIFNKWFDFDSLNLGSGSNSEALNKLINDELQKNLISNLH 446
Query: 343 SVLQPFLLRRVKSEVEKSLL-PKKEINLYVGMTDMQIEWYKSLLE------------KDI 389
++L+PFLLRR+K V ++L PK+E + MT Q ++YK+ L KD
Sbjct: 447 TILKPFLLRRLKKVVLANILPPKREYIINCPMTSAQEKFYKAGLNGKLKKTMFKELIKDF 506
Query: 390 DAVN----GAVGKRE----------------------------------------GKTRL 405
+N G V R +L
Sbjct: 507 FTLNDEYIGHVSNRSIRDFINYKLSGNETSNTDNKINPTLLQMDKLYKKNLQMEISNKKL 566
Query: 406 LNIVMQLRKCCNHPYLFEGAEPGPPYTTDEHLVFNSGKMIVLDKLLKKKKEQGSRVLIFS 465
N++MQLR+ + +LF P T E L+ SGK+ +L KL+ +G +VLI+S
Sbjct: 567 QNMMMQLRQIIDSTFLFYFPYLHPEDLTLETLLKTSGKLQILQKLIPPLISEGHKVLIYS 626
Query: 466 QMSRLLDILEDYCYFRGYEYCRIDGSTSHDERVEAIDEYNKPNSEKFIFLLTTRAGGLGI 525
Q +LD++ED+C + RIDGS +++ R + ++++N + IFLL+TRA GLGI
Sbjct: 627 QFVNMLDLIEDWCDLNSFATFRIDGSVNNETRKDQLEKFNSSKDKHNIFLLSTRAAGLGI 686
Query: 526 NLVTADTVVLYDSDWNPQADLQAMDRAHRIGQKKQVFVYRFVTENAIEEKVIERAAQKLR 585
NLV ADTVVL+DSDWNPQ DLQAMDR HRIGQ+ V VYR +N IE ++ RAA K
Sbjct: 687 NLVGADTVVLFDSDWNPQVDLQAMDRCHRIGQESPVIVYRLCCDNTIEHVILTRAANKRN 746
Query: 586 LDQLVIQQGTGKKTSALTNNKDDLIDMIQFG 616
L+++VIQ G L N+ + Q G
Sbjct: 747 LERMVIQMGKFNNLKKLALNEGFFFEGKQSG 777
>At2g44980 [K] KOG0385 Chromatin remodeling complex WSTF-ISWI small subunit
Length = 861
Score = 369 bits (946), Expect = e-101
Identities = 219/571 (38%), Positives = 328/571 (57%), Gaps = 37/571 (6%)
Query: 136 LRDYQVYGLNWLISLHESKLSGILA-DEMGLGKTLQSISFLGYLRYIKGIEGPYIVIVPK 194
L+ +QV G++WLI + ++ +L D+MGLGKTLQ+ISFL YL++ +G+ GP++V+ P
Sbjct: 51 LKPHQVEGVSWLIQKYLLGVNVVLELDQMGLGKTLQAISFLSYLKFRQGLPGPFLVLCPL 110
Query: 195 STLDNWQREFAKWTPEVKTVILQGDK----DFRKELIETKILTCNFDVLITSYEMVLKEK 250
S D W E ++TP ++ + GDK D RK + + FDVL+T+Y++ L ++
Sbjct: 111 SVTDGWVSEINRFTPNLEVLRYVGDKYCRLDMRKSMYDHGHFL-PFDVLLTTYDIALVDQ 169
Query: 251 LTLKRFAWEYILIDEAHRIKNEQSALSQVI-RLFYSKNRLLITGTPLQNNLHELWALLNF 309
L + W+Y +IDEA R+KN S L V+ F RLLITGTP+QNNL ELWAL++F
Sbjct: 170 DFLSQIPWQYAIIDEAQRLKNPNSVLYNVLLEQFLIPRRLLITGTPIQNNLTELWALMHF 229
Query: 310 LLPDVFGDSEVFDEWFQQNGKEED---QEVVVQQLHSVLQPFLLRRVKSEVEKS----LL 362
+P VFG + F F++ G D + + L +L F+LRR KS + +S L
Sbjct: 230 CMPLVFGTLDQFLSAFKETGDGLDVSNDKETYKSLKFILGAFMLRRTKSLLIESGNLVLP 289
Query: 363 PKKEINLYVGMTDMQIEWYKSLLEKDIDAVNGAVGKREGKTRLLNIVMQLRKCCNHPYLF 422
P E+ + V + +Q + Y S+L K++ + T L NIV+QLRK C+HPYLF
Sbjct: 290 PLTELTVMVPLVSLQKKIYTSILRKELPGLLELSSGGSNHTSLQNIVIQLRKACSHPYLF 349
Query: 423 EGAEPGPPYTTDEHLVFNSGKMIVLDKLLKKKKEQGSRVLIFSQMSRLLDILEDYCYFRG 482
G EP P+ EHLV SGK++VLD+LLK+ + G RVL+FSQM+ LDIL+D+ R
Sbjct: 350 PGIEP-EPFEEGEHLVQASGKLLVLDQLLKRLHDSGHRVLLFSQMTSTLDILQDFMELRR 408
Query: 483 YEYCRIDGSTSHDERVEAIDEYNKPN----------SEKFIFLLTTRAGGLGINLVTADT 532
Y Y R+DGS +ER AI ++ S F+F+++TRAGG+G+NLV ADT
Sbjct: 409 YSYERLDGSVRAEERFAAIKNFSAKTERGLDSEVDGSNAFVFMISTRAGGVGLNLVAADT 468
Query: 533 VVLYDSDWNPQADLQAMDRAHRIGQKKQVFVYRFVTENAIEEKVIERAAQKLRLDQLVIQ 592
V+ Y+ DWNPQ D QA+ RAHRIGQ V VTE+++EE ++ RA +KL+L V+
Sbjct: 469 VIFYEQDWNPQVDKQALQRAHRIGQISHVLSINLVTEHSVEEVILRRAERKLQLSHNVVG 528
Query: 593 QGTGKKTSALTNNKDDLIDMIQFGARDMLQHGSGNITVDEDIDEILKK-----------G 641
+K + + + + +F ++ S N+ + E I + +K
Sbjct: 529 DNMEEKEEDGGDLRSLVFGLQRFDPEEIHNEESDNLKMVE-ISSLAEKVVAIRQNVEPDK 587
Query: 642 ERKTLELNAKYESLGLDDLQKFNGMADQSAY 672
E + E+N+ LG + D+++Y
Sbjct: 588 EERRFEINSSDTLLGNTSSASLDSELDEASY 618
>At5g44800 [R] KOG0383 Predicted helicase
Length = 2228
Score = 363 bits (932), Expect = e-100
Identities = 205/517 (39%), Positives = 310/517 (59%), Gaps = 31/517 (5%)
Query: 126 QSPSFIKEGKLRDYQVYGLNWLISLHESKLSGILADEMGLGKTLQSISFLGYLRYIKGIE 185
+ P ++ G L +Q+ LNWL + ILADEMGLGKT+ + +FL L + G+
Sbjct: 665 EQPQELRGGALFAHQLEALNWLRRCWHKSKNVILADEMGLGKTVSASAFLSSLYFEFGVA 724
Query: 186 GPYIVIVPKSTLDNWQREFAKWTPEVKTVILQGDKDFRKELIE------------TKILT 233
P +V+VP ST+ NW EF+ W P + V G R + + K +
Sbjct: 725 RPCLVLVPLSTMPNWLSEFSLWAPLLNVVEYHGSAKGRAIIRDYEWHAKNSTGTTKKPTS 784
Query: 234 CNFDVLITSYEMVLKEKLTLKRFAWEYILIDEAHRIKNEQSALSQVIRLFYSKNRLLITG 293
F+VL+T+YEMVL + L+ WE +++DE HR+KN +S L ++ F ++R+L+TG
Sbjct: 785 YKFNVLLTTYEMVLADSSHLRGVPWEVLVVDEGHRLKNSESKLFSLLNTFSFQHRVLLTG 844
Query: 294 TPLQNNLHELWALLNFLLPDVFGDSEVFDEWFQQNGKEEDQEVVVQQLHSVLQPFLLRRV 353
TPLQNN+ E++ LLNFL P F F+E F E V++L ++ P +LRR+
Sbjct: 845 TPLQNNIGEMYNLLNFLQPSSFPSLSSFEERFHDLTSAEK----VEELKKLVAPHMLRRL 900
Query: 354 KSEVEKSLLPKKEINLYVGMTDMQIEWYKSLLEKDIDAVNGAVGKREGKTRLLNIVMQLR 413
K + +++ PK E + V +T +Q E+Y+++L K+ + +GK + +LNIVMQLR
Sbjct: 901 KKDAMQNIPPKTERMVPVELTSIQAEYYRAMLTKNYQILRN-IGKGVAQQSMLNIVMQLR 959
Query: 414 KCCNHPYLFEGAEP--GPPYTTDEHLVFNSGKMIVLDKLLKKKKEQGSRVLIFSQMSRLL 471
K CNHPYL G EP G + + S K+ +L +LK ++G RVLIFSQM++LL
Sbjct: 960 KVCNHPYLIPGTEPESGSLEFLHDMRIKASAKLTLLHSMLKVLHKEGHRVLIFSQMTKLL 1019
Query: 472 DILEDYCY--FRGYEYCRIDGSTSHDERVEAIDEYNKPNSEKFIFLLTTRAGGLGINLVT 529
DILEDY F + R+DGS + +R AI +N+ + +F+FLL+TRA GLGINL T
Sbjct: 1020 DILEDYLNIEFGPKTFERVDGSVAVADRQAAIARFNQ-DKNRFVFLLSTRACGLGINLAT 1078
Query: 530 ADTVVLYDSDWNPQADLQAMDRAHRIGQKKQVFVYRFVTENAIEEKVIERAAQKLRLDQL 589
ADTV++YDSD+NP AD+QAM+RAHRIGQ K++ VYR V ++EE++++ A +KL LDQL
Sbjct: 1079 ADTVIIYDSDFNPHADIQAMNRAHRIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQL 1138
Query: 590 VIQQGTGKKTSALTNNKDDLIDMIQFGARDMLQHGSG 626
+ + +K + D++++G ++ +G
Sbjct: 1139 FVNKSGSQK---------EFEDILRWGTEELFNDSAG 1166
>At2g46020 [BK] KOG0386 Chromatin remodeling complex SWI/SNF component SWI2
and related ATPases (DNA/RNA helicase superfamily)
Length = 1245
Score = 361 bits (927), Expect = 3e-99
Identities = 203/491 (41%), Positives = 303/491 (61%), Gaps = 41/491 (8%)
Query: 126 QSPSFIKEGKLRDYQVYGLNWLISLHESKLSGILADEMGLGKTLQSISFLGYLRYIKGIE 185
+ PS ++ G LRDYQ+ GL W++SL+ +KL+GILADEMGLGKT+Q ++ + YL KG
Sbjct: 24 RQPSMLQAGTLRDYQLVGLQWMLSLYNNKLNGILADEMGLGKTVQVMALIAYLMEFKGNY 83
Query: 186 GPYIVIVPKSTLDNWQREFAKWTPEVKTVILQGDKDFRKELIETKILTCNFDVLITSYEM 245
GP+++IVP + L NW+ E W P V + G KD R +L +++ F+VL+T+YE
Sbjct: 84 GPHLIIVPNAVLVNWKSELHTWLPSVSCIYYVGTKDQRSKLF-SQVKFEKFNVLVTTYEF 142
Query: 246 VLKEKLTLKRFAWEYILIDEAHRIKNEQSALSQVIRLFYSKNRLLITGTPLQNNLHELWA 305
++ ++ L + W+YI+IDEA R+K+ +S L++ + + + RLL+TGTPLQN+L ELW+
Sbjct: 143 IMYDRSKLSKVDWKYIIIDEAQRMKDRESVLARDLDRYRCQRRLLLTGTPLQNDLKELWS 202
Query: 306 LLNFLLPDVFGDSEVFDEWFQQNGKEED--------------QEVVVQQLHSVLQPFLLR 351
LLN LLPDVF + + F +WF Q ++E + +V+ +LH +L+PF+LR
Sbjct: 203 LLNLLLPDVFDNRKAFHDWFAQPFQKEGPAHNIEDDWLETEKKVIVIHRLHQILEPFMLR 262
Query: 352 RVKSEVEKSLLPKKEINLYVGMTDMQ---IEWYKSLLEKDID-------AVNGAVGKREG 401
R +VE SL K + L M+ +Q +W K+ +D A + + +
Sbjct: 263 RRVEDVEGSLPAKVSVVLRCRMSAIQSAVYDWIKATGTLRVDPDDEKLRAQKNPIYQAKI 322
Query: 402 KTRLLNIVMQLRKCCNHPYLFEGAEPGPPYTTD---EHLVFNSGKMIVLDKLLKKKKEQG 458
L N M+LRK CNHP L PY D + LV + GK+ +LD++L K + G
Sbjct: 323 YRTLNNRCMELRKACNHPLL------NYPYFNDFSKDFLVRSCGKLWILDRILIKLQRTG 376
Query: 459 SRVLIFSQMSRLLDILEDYCYFRGYEYCRIDGSTSHDERVEAIDEYNKPNSEKFIFLLTT 518
RVL+FS M++LLDILE+Y +R Y RIDG+TS ++R AI ++N P+++ FIFLL+
Sbjct: 377 HRVLLFSTMTKLLDILEEYLQWRRLVYRRIDGTTSLEDRESAIVDFNDPDTDCFIFLLSI 436
Query: 519 RAGGLGINLVTADTVVLYDSDWNPQADLQAMDRAHRIGQKKQVFVYRFVTENAIEEKVIE 578
RA G G+NL TADTVV+YD D NP+ + QA+ RAHRIGQ ++V V E V+E
Sbjct: 437 RAAGRGLNLQTADTVVIYDPDPNPKNEEQAVARAHRIGQTREVKVIYM-------EAVVE 489
Query: 579 RAAQKLRLDQL 589
+ + + D+L
Sbjct: 490 KLSSHQKEDEL 500
>SPBP35G2.10 [R] KOG0383 Predicted helicase
Length = 1418
Score = 340 bits (873), Expect = 5e-93
Identities = 214/558 (38%), Positives = 314/558 (55%), Gaps = 47/558 (8%)
Query: 128 PSFIKEGKLRDYQVYGLNWLISLHESKLSGILADEMGLGKTLQSISFLGYLRYIKGIEGP 187
PSFIK G L YQ+ GLNWL + ILADEMGLGKT+Q ISF+ L Y P
Sbjct: 548 PSFIKGGTLMPYQLKGLNWLYLRWYTHHPCILADEMGLGKTVQVISFISVLFYRHKCF-P 606
Query: 188 YIVIVPKSTLDNWQREFAKWTPEVKTVILQGDKDFRKELIETKILT------CNFDVLIT 241
+VIVP +T+ NW+RE KW P ++ +L G + R + + +++ + VL+
Sbjct: 607 VLVIVPHATVANWERELKKWAPFLQINVLVGSEKNRSLVRDYRLINQKDPKHVSTHVLVI 666
Query: 242 SYEMVLKEKLTLKRFAWEYILIDEAHRIKNEQSALSQVIRLFYSKNRLLITGTPLQNNLH 301
S V +E L++F W+ +++DE R+KN+QS+L + S +LL+TGTPLQNN+
Sbjct: 667 SASNVEREISLLRKFQWKVLIVDEGQRLKNDQSSLFYYLSSVKSDFKLLLTGTPLQNNVR 726
Query: 302 ELWALLNFLLPDVFGDSEVFDEWFQQNGKEEDQEVVVQQLHSVLQPFLLRRVKSEVEKSL 361
EL+ LL FL P +E+ ++ D E V + LH +L+PF LRRVKSEV +
Sbjct: 727 ELFNLLQFLNPMKINAAEL-----EKRYSIIDTEKVTE-LHQILKPFFLRRVKSEVLDNF 780
Query: 362 LPKKEINLYVGMTDMQIEWYKSLLEKDIDAVNGAVGKR-------EGKTRLLNIVMQLRK 414
K E+ + + MT +Q YKS+L K++ + G + T L NI+MQLRK
Sbjct: 781 PTKVEVIIPLSMTPVQKGLYKSILSKNLSLLRNITGYANTSSSGGQRTTSLNNILMQLRK 840
Query: 415 CCNHPYLFEGAEPGPPYTTDEHLVFN---------SGKMIVLDKLLKKKKEQGSRVLIFS 465
HPY++ P D +L + S K ++L L+ K +G R+L+FS
Sbjct: 841 TLAHPYIYS------PDIEDRNLPYELAMRSLEEASCKFLILRLLVPKLITRGHRILLFS 894
Query: 466 QMSRLLDILEDYCYFRGYEYCRIDGSTSHDERVEAIDEYNKPNSEKFIFLLTTRAGGLGI 525
Q + LDILED+ ++ Y R DG++S ER AID +N PNSE FLL+TRAGG+GI
Sbjct: 895 QFIQQLDILEDWFEYKNIAYARFDGASSEMERQSAIDSFNAPNSELSCFLLSTRAGGVGI 954
Query: 526 NLVTADTVVLYDSDWNPQADLQAMDRAHRIGQKKQVFVYRFVTENAIEEKVIERAAQKLR 585
NL +ADTV++ D D+NP D+QA+ RAHR GQKK+V V+ T +++EEK+I+ A +KL
Sbjct: 955 NLASADTVIILDPDFNPHQDMQAIARAHRYGQKKKVLVFVLTTRDSVEEKIIQNAQKKLV 1014
Query: 586 LDQLVIQQGTGKKTSALTNNKDDLIDMIQFGARDMLQHGS-------GNITVDEDIDEIL 638
LD L+++ N++ DL +++ GAR + + +V+ I E
Sbjct: 1015 LDHLIVE-----SLDQNHNSEKDLESILRHGARALFEEAGDEPSIKYNEYSVELLISEAE 1069
Query: 639 KKGERKTLELNAKYESLG 656
K+ + T E + K G
Sbjct: 1070 KQEDTSTDESDIKSNKFG 1087
>Hs14149730 [B] KOG0389 SNF2 family DNA-dependent ATPase
Length = 1026
Score = 320 bits (819), Expect = 1e-86
Identities = 189/522 (36%), Positives = 287/522 (54%), Gaps = 67/522 (12%)
Query: 126 QSPSFIKEG-KLRDYQVYGLNWLISLHESKLSGILADEMGLGKTLQSISFLGYLRYIKGI 184
+ PS + + L+ YQ GLNWL +H+ L+GILADEMGLGKT+Q+I+FL YL Y +G
Sbjct: 486 EQPSILNQSLSLKPYQKVGLNWLALVHKHGLNGILADEMGLGKTIQAIAFLAYL-YQEGN 544
Query: 185 EGPYIVIVPKSTLDNWQREFAKWTPEVKTVILQGDKDFRKEL---IETKILTCNFDVLIT 241
GP++++VP ST+DNW RE W P +K + G ++ RK++ I ++ +++V++T
Sbjct: 545 NGPHLIVVPASTIDNWLREVNLWCPTLKVLCYYGSQEERKQIRFNIHSRYE--DYNVIVT 602
Query: 242 SYEMVLK---EKLTLKRFAWEYILIDEAHRIKNEQSALSQVIRLFYSKNRLLITGTPLQN 298
+Y + ++ +R Y + DE H +KN S Q + + NRLL+TGTP+QN
Sbjct: 603 TYNCAISSSDDRSLFRRLKLNYAIFDEGHMLKNMGSIRYQHLMTINANNRLLLTGTPVQN 662
Query: 299 NLHELWALLNFLLPDVFGDS-EVFDEWFQQNGKEEDQEVV-----VQQLHSVLQPFLLRR 352
NL EL +LLNF++P +F S F K D++ + + +++PF+LRR
Sbjct: 663 NLLELMSLLNFVMPHMFSSSTSEIRRMFSSKTKSADEQSIYEKERIAHAKQIIKPFILRR 722
Query: 353 VKSEVEKSLLPKKEINLYVGMTDMQIEWYKSLLEKDIDAVNGAVGKREGKTRLLNIVMQL 412
VK EV K L PKK+ M++ Q + Y L + + ++ E T + N++MQL
Sbjct: 723 VKEEVLKQLPPKKDRIELCAMSEKQEQLYLGLFNR----LKKSINNLEKNTEMCNVMMQL 778
Query: 413 RKCCNHPYLFE--------------------GAEPGPP---------------------- 430
RK NHP L E P
Sbjct: 779 RKMANHPLLHRQYYTAEKLKEMSQLMLKEPTHCEANPDLIFEDMEVMTDFELHVLCKQYR 838
Query: 431 ----YTTDEHLVFNSGKMIVLDKLLKKKKEQGSRVLIFSQMSRLLDILEDYCYFRGYEYC 486
+ D L+ +SGK VL +L + K++G RV++FSQ + +LDILE + Y
Sbjct: 839 HINNFQLDMDLILDSGKFRVLGCILSELKQKGDRVVLFSQFTMMLDILEVLLKHHQHRYL 898
Query: 487 RIDGSTSHDERVEAIDEYNKPNSEKFIFLLTTRAGGLGINLVTADTVVLYDSDWNPQADL 546
R+DG T ER+ IDE+N + + F+FLL+T+AGGLGINL +A+ V+L+D D NP D
Sbjct: 899 RLDGKTQISERIHLIDEFN-TDMDIFVFLLSTKAGGLGINLTSANVVILHDIDCNPYNDK 957
Query: 547 QAMDRAHRIGQKKQVFVYRFVTENAIEEKVIERAAQKLRLDQ 588
QA DR HR+GQ K+V V + +++ IEE +++ QKL+L+Q
Sbjct: 958 QAEDRCHRVGQTKEVLVIKLISQGTIEESMLKINQQKLKLEQ 999
>Hs4557565 [KL] KOG0387 Transcription-coupled repair protein CSB/RAD26
(contains SNF2 family DNA-dependent ATPase domain)
Length = 1493
Score = 312 bits (800), Expect = 2e-84
Identities = 193/499 (38%), Positives = 282/499 (55%), Gaps = 44/499 (8%)
Query: 128 PSFIKEGKLRDYQVYGLNWLISLHESKLSGILADEMGLGKTLQSISFLGYLRYIK----- 182
P F+ + KL YQ G+ WL LH + GIL DEMGLGKT+Q I+FL L Y K
Sbjct: 500 PGFLFK-KLFKYQQTGVRWLWELHCQQAGGILGDEMGLGKTIQIIAFLAGLSYSKIRTRG 558
Query: 183 ------GIEGPYIVIVPKSTLDNWQREFAKWTPEVKTVILQ--GDKDFRKELIETKILTC 234
G+ GP +++ P + + W +EF W P + IL G +KE + + C
Sbjct: 559 SNYRFEGL-GPTVIVCPTTVMHQWVKEFHTWWPPFRVAILHETGSYTHKKEKLIRDVAHC 617
Query: 235 NFDVLITSYEMVLKEKLTLKRFAWEYILIDEAHRIKNEQSALSQVIRLFYSKNRLLITGT 294
+ +LITSY + + + R+ W Y+++DE H+I+N +A++ + F + +R++++G+
Sbjct: 618 H-GILITSYSYIRLMQDDISRYDWHYVILDEGHKIRNPNAAVTLACKQFRTPHRIILSGS 676
Query: 295 PLQNNLHELWALLNFLLPDVFGDSEVFDEWFQ----QNGKEEDQEVVVQQ-------LHS 343
P+QNNL ELW+L +F+ P G VF E F G V V+ L
Sbjct: 677 PMQNNLRELWSLFDFIFPGKLGTLPVFMEQFSVPITMGGYSNASPVQVKTAYKCACVLRD 736
Query: 344 VLQPFLLRRVKSEVEKSL-LP-KKEINLYVGMTDMQIEWYKSLLE-KDIDAVNGAVGKRE 400
+ P+LLRR+KS+V+ SL LP K E L+ +TD Q + Y++ ++ K++ +
Sbjct: 737 TINPYLLRRMKSDVKMSLSLPDKNEQVLFCRLTDEQHKVYQNFVDSKEVYRI------LN 790
Query: 401 GKTRLLNIVMQLRKCCNHPYLFEGAEPGPPYTTDEHLVFN-------SGKMIVLDKLLKK 453
G+ ++ + ++ LRK CNHP LF G D+ L + SGKMIV++ LLK
Sbjct: 791 GEMQIFSGLIALRKICNHPDLFSGGPKNLKGLPDDELEEDQFGYWKRSGKMIVVESLLKI 850
Query: 454 KKEQGSRVLIFSQMSRLLDILEDYCYFRGYEYCRIDGSTSHDERVEAIDEYNKPNSEKFI 513
+QG RVL+FSQ ++LDILE + + Y Y ++DG+T+ R I YN+ S F+
Sbjct: 851 WHKQGQRVLLFSQSRQMLDILEVFLRAQKYTYLKMDGTTTIASRQPLITRYNEDTSI-FV 909
Query: 514 FLLTTRAGGLGINLVTADTVVLYDSDWNPQADLQAMDRAHRIGQKKQVFVYRFVTENAIE 573
FLLTTR GGLG+NL A+ VV+YD DWNP D QA +RA RIGQKKQV VYR +T IE
Sbjct: 910 FLLTTRVGGLGVNLTGANRVVIYDPDWNPSTDTQARERAWRIGQKKQVTVYRLLTAGTIE 969
Query: 574 EKVIERAAQKLRLDQLVIQ 592
EK+ R K L V++
Sbjct: 970 EKIYHRQIFKQFLTNRVLK 988
>7297570 [B] KOG0389 SNF2 family DNA-dependent ATPase
Length = 844
Score = 308 bits (789), Expect = 3e-83
Identities = 186/532 (34%), Positives = 296/532 (54%), Gaps = 63/532 (11%)
Query: 126 QSPSFIKEG-KLRDYQVYGLNWLISLHESKLSGILADEMGLGKTLQSISFLGYLRYIKGI 184
+ P + G +L DYQ+ GLNWL +H+ +++GILADEMGLGKT+Q I+FL YL+
Sbjct: 278 EQPKLLSSGLQLADYQIIGLNWLTVMHKQEMNGILADEMGLGKTIQVIAFLAYLKENGLS 337
Query: 185 EGPYIVIVPKSTLDNWQREFAKWTPEVKTVILQGDKDFRKELIE--TKILTCNFDVLITS 242
+ ++++VP STLDNW+ E ++W PE+ G +D R+ + K FDVL+T+
Sbjct: 338 QAAHLIVVPSSTLDNWEAEISRWCPELVVEKYHGSQDERRRMRGRFAKDGFTGFDVLLTT 397
Query: 243 YEMV---LKEKLTLKRFAWEYILIDEAHRIKNEQSALSQVIRLFYSKNRLLITGTPLQNN 299
Y +V +E+ + +Y++ DEAH +KN + + ++ R+L+TGTPLQNN
Sbjct: 398 YHIVGSTPEERKMFRVCKLDYVIFDEAHMLKNMTTQRYANLITINARMRILLTGTPLQNN 457
Query: 300 LHELWALLNFLLPDVFGDS-EVFDEWFQQNGKEED--------QEVVVQQLHSVLQPFLL 350
L EL +LL F++P F S E F + GK + QE +Q+ +++PF+L
Sbjct: 458 LLELISLLCFVMPKFFAKSIEDIKSLFAKKGKSDGDQDEVSQFQETQIQRAKRIMKPFVL 517
Query: 351 RRVKSEVEKSLLPKKEINLYVGMTDMQIEWYKSLLEKDIDAVNGAVGKREGKTRLLNIVM 410
RR+K +V K+L K + V M+ Q +Y L+ D + N + + I+M
Sbjct: 518 RRLKKDVLKNLPKKLSLVEKVPMSSQQKIYYHELV--DYYSNNKGEVCSSSERAGIAIMM 575
Query: 411 QLRKCCNHP-------------------------------YLFEGAEPGPPYTT------ 433
++R+ NHP Y+FE +
Sbjct: 576 EMRRIANHPLLMRHYFTDANLRGFSKRLANASSFKKTNEQYIFEELAVMSDFQVYQMMNK 635
Query: 434 --------DEHLVFNSGKMIVLDKLLKKKKEQGSRVLIFSQMSRLLDILEDYCYFRGYEY 485
++L+ +SGK + LD LL K K +G RVL+FSQ + +LDI+E+Y R + +
Sbjct: 636 HEFYDVKIPDNLICDSGKFLYLDTLLPKLKAEGHRVLLFSQFTMMLDIVEEYLRIRKFGF 695
Query: 486 CRIDGSTSHDERVEAIDEYNKPNSEKFIFLLTTRAGGLGINLVTADTVVLYDSDWNPQAD 545
CR+DG+T+ + R + I ++N +S F+FLL+T+AGG+GINL ADT V++D D+NP D
Sbjct: 696 CRLDGATAVNVRQDLITDFNGDDS-IFVFLLSTKAGGVGINLTAADTCVIHDIDFNPYND 754
Query: 546 LQAMDRAHRIGQKKQVFVYRFVTENAIEEKVIERAAQKLRLDQLVIQQGTGK 597
QA DR HR+GQ++ V +YR ++E+ IEE ++ A +KL+L++ + G+
Sbjct: 755 KQAEDRCHRMGQQRPVTIYRLISESTIEEGILMAAEEKLKLEKDITSNEKGE 806
>At2g18760 [KL] KOG0387 Transcription-coupled repair protein CSB/RAD26
(contains SNF2 family DNA-dependent ATPase domain)
Length = 1187
Score = 290 bits (742), Expect = 8e-78
Identities = 187/520 (35%), Positives = 269/520 (50%), Gaps = 59/520 (11%)
Query: 135 KLRDYQVYGLNWLISLHESKLSGILADEMGLGKTLQSISFLGYLRYIKGIEGPYIVIVPK 194
KL DYQ G+ WL LH + GI+ DEMGLGKT+Q +SFLG L + K + P I+I P
Sbjct: 384 KLFDYQRVGVQWLWELHCQRAGGIIGDEMGLGKTIQVLSFLGSLHFSKMYK-PSIIICPV 442
Query: 195 STLDNWQREFAKWTPEVKTVIL------------QG-------------DKDFRKELIET 229
+ L W+RE KW P+ IL QG D D + T
Sbjct: 443 TLLRQWRREAQKWYPDFHVEILHDSAQDSGHGKGQGKASESDYDSESSVDSDHEPKSKNT 502
Query: 230 K--------ILTCNFDVLITSYEMVLKEKLTLKRFAWEYILIDEAHRIKNEQSALSQVIR 281
K +L +LIT+YE + + L W Y ++DE HRI+N S ++ V +
Sbjct: 503 KKWDSLLNRVLNSESGLLITTYEQLRLQGEKLLNIEWGYAVLDEGHRIRNPNSDITLVCK 562
Query: 282 LFYSKNRLLITGTPLQNNLHELWALLNFLLPDVFGDSEVFDEWFQQ----NGKEEDQEVV 337
+ +R+++TG P+QN L ELW+L +F+ P G VF+ F G +
Sbjct: 563 QLQTVHRIIMTGAPIQNKLTELWSLFDFVFPGKLGVLPVFEAEFSVPITVGGYANASPLQ 622
Query: 338 VQQ-------LHSVLQPFLLRRVKSEVEKSLLPKKEINLYVGMTDMQIEWYKSLL-EKDI 389
V L ++ P+LLRR+K++V L K E L+ +T Q Y++ L ++
Sbjct: 623 VSTAYRCAVVLRDLIMPYLLRRMKADVNAHLTKKTEHVLFCSLTVEQRSTYRAFLASSEV 682
Query: 390 DAVNGAVGKREGKTRLLNIVMQLRKCCNHPYLFEG--AEPGPPYTTDEHLVFNSGKMIVL 447
+ + +G L + +RK CNHP L E + P Y E SGKM V+
Sbjct: 683 EQIF------DGNRNSLYGIDVMRKICNHPDLLEREHSHQNPDYGNPER----SGKMKVV 732
Query: 448 DKLLKKKKEQGSRVLIFSQMSRLLDILEDYCYFRGYEYCRIDGSTSHDERVEAIDEYNKP 507
++LK K+QG RVL+FSQ ++LDILE + Y Y R+DG T +R+ IDE+N
Sbjct: 733 AEVLKVWKQQGHRVLLFSQTQQMLDILESFLVANEYSYRRMDGLTPVKQRMALIDEFNN- 791
Query: 508 NSEKFIFLLTTRAGGLGINLVTADTVVLYDSDWNPQADLQAMDRAHRIGQKKQVFVYRFV 567
+ + F+F+LTT+ GGLG NL A+ V+++D DWNP D+QA +RA RIGQKK V VYR +
Sbjct: 792 SEDMFVFVLTTKVGGLGTNLTGANRVIIFDPDWNPSNDMQARERAWRIGQKKDVTVYRLI 851
Query: 568 TENAIEEKVIERAAQKLRLDQLVIQQGTGKKTSALTNNKD 607
T IEEKV R K L +++ ++ + KD
Sbjct: 852 TRGTIEEKVYHRQIYKHFLTNKILKNPQQRRFFKARDMKD 891
>YPL082c [K] KOG0392 SNF2 family DNA-dependent ATPase domain-containing
protein
Length = 1867
Score = 288 bits (737), Expect = 3e-77
Identities = 188/566 (33%), Positives = 293/566 (51%), Gaps = 74/566 (13%)
Query: 136 LRDYQVYGLNWLISLHESKLSGILADEMGLGKTLQSISFLGYLRYIK--------GIEG- 186
LR YQ G+NWL L++ L GIL D+MGLGKTLQ+I + +Y++ +E
Sbjct: 1272 LRKYQQDGVNWLAFLNKYHLHGILCDDMGLGKTLQTICIIASDQYLRKEDYEKTRSVESR 1331
Query: 187 --PYIVIVPKSTLDNWQREFAKWTPEVKTVILQGDKDFRKELIETKILTCNFDVLITSYE 244
P ++I P S +W+ EF ++ P +K V+ G R L + + D+++TSY+
Sbjct: 1332 ALPSLIICPPSLTGHWENEFDQYAPFLKVVVYAGGPTVRLTL---RPQLSDADIIVTSYD 1388
Query: 245 MVLKEKLTLKRFAWEYILIDEAHRIKNEQSALSQVIRLFYSKNRLLITGTPLQNNLHELW 304
+ + L + + Y ++DE H IKN QS L++ ++ + +RL++TGTP+QNN+ ELW
Sbjct: 1389 VARNDLAVLNKTEYNYCVLDEGHIIKNSQSKLAKAVKEITANHRLILTGTPIQNNVLELW 1448
Query: 305 ALLNFLLPDVFGDSEVFDEWF------QQNGKEEDQE-----VVVQQLHSVLQPFLLRRV 353
+L +FL+P G ++F E F +N K +E + ++ LH + PF+LRR+
Sbjct: 1449 SLFDFLMPGFLGTEKMFQERFAKPIAASRNSKTSSKEQEAGVLALEALHKQVLPFMLRRL 1508
Query: 354 KSEVEKSLLPKKEINLYVGMTDMQIEWY-------KSLLEKDIDAVNGAVGKREGKTRLL 406
K +V L PK + Y + D+Q + Y K+++EKDI+ N + +GK +
Sbjct: 1509 KEDVLSDLPPKIIQDYYCELGDLQKQLYMDFTKKQKNVVEKDIE--NSEIA--DGKQHIF 1564
Query: 407 NIVMQLRKCCNHPYLFEGAEPGPPYTT-----------DEHLVFNSGKMIVLDKLL---- 451
+ +RK CNHP L P P D H + N+ K+ L LL
Sbjct: 1565 QALQYMRKLCNHPALV--LSPNHPQLAQVQDYLKQTGLDLHDIINAPKLSALRTLLFECG 1622
Query: 452 ------KKKKEQGS-----------RVLIFSQMSRLLDILEDYC---YFRGYEYCRIDGS 491
KK Q R LIF Q+ +LD++E+ Y Y R+DGS
Sbjct: 1623 IGEEDIDKKASQDQNFPIQNVISQHRALIFCQLKDMLDMVENDLFKKYMPSVTYMRLDGS 1682
Query: 492 TSHDERVEAIDEYNKPNSEKFIFLLTTRAGGLGINLVTADTVVLYDSDWNPQADLQAMDR 551
+R + + ++N+ S + LLTT+ GGLG+NL ADTV+ + DWNP DLQAMDR
Sbjct: 1683 IDPRDRQKVVRKFNEDPSIDCL-LLTTKVGGLGLNLTGADTVIFVEHDWNPMNDLQAMDR 1741
Query: 552 AHRIGQKKQVFVYRFVTENAIEEKVIERAAQKLRLDQLVIQQGTGKKTSALTNNKDDLID 611
AHRIGQKK V VYR +T+ +EEK++ K+ + V+ Q S T+ DL D
Sbjct: 1742 AHRIGQKKVVNVYRIITKGTLEEKIMGLQKFKMNIASTVVNQQNSGLASMDTHQLLDLFD 1801
Query: 612 MIQFGARDMLQHGSGNITVDEDIDEI 637
++D + +G+ + +++I
Sbjct: 1802 PDNVTSQDNEEKNNGDSQAAKGMEDI 1827
>At2g02090 [B] KOG0389 SNF2 family DNA-dependent ATPase
Length = 763
Score = 282 bits (721), Expect = 2e-75
Identities = 191/535 (35%), Positives = 278/535 (51%), Gaps = 84/535 (15%)
Query: 136 LRDYQVYGLNWLISLHESKLSG-ILADEMGLGKTLQSISFLGYLRYIKGIEGPYIVIVPK 194
L+ YQ+ G+N+L+ L++ + G ILADEMGLGKT+Q+I++L L + GP++V+ P
Sbjct: 213 LKPYQLVGVNFLLLLYKKGIEGAILADEMGLGKTIQAITYLTLLSRLNNDPGPHLVVCPA 272
Query: 195 STLDNWQREFAKWTPEVKTVILQG--DKDFRKEL--IETKILTCNFDVLITSY------- 243
S L+NW+RE KW P + G + +EL + F+VL+ Y
Sbjct: 273 SVLENWERELRKWCPSFTVLQYHGAARAAYSRELNSLSKAGKPPPFNVLLVCYSLFERHS 332
Query: 244 EMVLKEKLTLKRFAWEYILIDEAHRIKNEQS----ALSQVIRLFYSKNRLLITGTPLQNN 299
E ++ LKR+ W +L+DEAH +K++ S L V R + RL++TGTPLQN+
Sbjct: 333 EQQKDDRKVLKRWRWSCVLMDEAHALKDKNSYRWKNLMSVAR--NANQRLMLTGTPLQND 390
Query: 300 LHELWALLNFLLPDVFGDSEVFDEWFQQNGKEEDQEVVVQQLHSVLQPFLLRRVKSEVEK 359
LHELW+LL F+LPD+F V ++ ED E++ ++ S+L PF+LRR+KS+V +
Sbjct: 391 LHELWSLLEFMLPDIFTTENVD---LKKLLNAEDTELIT-RMKSILGPFILRRLKSDVMQ 446
Query: 360 SLLPKKEINLYVGMTDMQIEWYKSLLEKDIDAVNGAVGKREGKT-----------RLLNI 408
L+PK + YV M Q + YK +E+ A + K K+ ++ N
Sbjct: 447 QLVPKIQRVEYVLMERKQEDAYKEAIEEYRAASQARLVKLSSKSLNSLAKALPKRQISNY 506
Query: 409 VMQLRKCCNHPYLFE--------------------------------------------- 423
Q RK NHP L
Sbjct: 507 FTQFRKIANHPLLIRRIYSDEDVIRIARKLHPIGAFGFECSLDRVIEEVKGFNDFRIHQL 566
Query: 424 ----GAEPGPPYTTDEHLVFNSGKMIVLDKLLKKKKEQGSRVLIFSQMSRLLDILEDYCY 479
G +D+H++ S K L +LL K+ G RVLIFSQ + +LDILE
Sbjct: 567 LFQYGVNDTKGTLSDKHVML-SAKCRTLAELLPSMKKSGHRVLIFSQWTSMLDILEWTLD 625
Query: 480 FRGYEYCRIDGSTSHDERVEAIDEYNKPNSEKFIFLLTTRAGGLGINLVTADTVVLYDSD 539
G Y R+DGST +R +D +N S F LL+TRAGG G+NL ADTV+++D D
Sbjct: 626 VIGVTYRRLDGSTQVTDRQTIVDTFNNDKS-IFACLLSTRAGGQGLNLTGADTVIIHDMD 684
Query: 540 WNPQADLQAMDRAHRIGQKKQVFVYRFVTENAIEEKVIERAAQKLRLDQLVIQQG 594
+NPQ D QA DR HRIGQ K V ++R VT++ ++E + E A +KL LD V++ G
Sbjct: 685 FNPQIDRQAEDRCHRIGQTKPVTIFRLVTKSTVDENIYEIAKRKLVLDAAVLESG 739
>SPCC1235.05c [B] KOG0389 SNF2 family DNA-dependent ATPase
Length = 1284
Score = 280 bits (717), Expect = 7e-75
Identities = 187/544 (34%), Positives = 291/544 (53%), Gaps = 75/544 (13%)
Query: 126 QSPSFIKEGKLRDYQVYGLNWLISLHESKLSGILADEMGLGKTLQSISFLGYLRYIKGIE 185
Q + + +L+ YQ+ G+NWL L++ KLSGILADEMGLGKT Q ++F L +G
Sbjct: 540 QPKTLASDVQLKSYQLVGVNWLHLLYQQKLSGILADEMGLGKTCQVVAFFALL-LEQGHH 598
Query: 186 GPYIVIVPKSTLDNWQREFAKWTPEVKTVILQGDKDFR---KELIETKILTCNFDVLITS 242
GP++V+VP STL+NW RE A++ P ++ G + R +E IE + +D+L+T+
Sbjct: 599 GPHLVVVPSSTLENWLRELARFCPSLRVEPYYGSQQERANIREAIEENEI--KYDILVTT 656
Query: 243 YEMVL---KEKLTLKRFAWEYILIDEAHRIKNEQSALSQVIRLFYSKNRLLITGTPLQNN 299
Y++ +++ LK ++ + DE H +KN S + + + RLL+TGTPLQNN
Sbjct: 657 YQLATNNKEDRSFLKHQNFDVCVYDEGHYLKNRMSERYKHLMNLNANFRLLLTGTPLQNN 716
Query: 300 LHELWALLNFLLPDVF-GDSEVFDEWFQQNGKEE---DQEVV----VQQLHSVLQPFLLR 351
L EL +LL F+LP++F D + D F+ + +Q ++ + + +++ PF+LR
Sbjct: 717 LKELVSLLAFILPNMFDSDMDDLDVIFKAKPTADADIEQALLSKQRISRAKTMMTPFVLR 776
Query: 352 RVKSEVEKSLLPKKEINLYVGMTDMQIEWY--------KSLLEKDIDAVNGAVGKREGKT 403
R K++V L K +I + +++ Q+E Y L +D + E
Sbjct: 777 RRKNQVLNDLPKKTQIIEHCKLSENQLEIYNRYAALQKNQQLRRDDKRNKRSKNDEESDG 836
Query: 404 RLL---NIVMQLRKCCNH-------------------------------PYLFEGAE--- 426
+ L +++MQLRK NH Y++E E
Sbjct: 837 KSLSAGHVLMQLRKAANHALLFRKFYDDEKLKQMAKDIMQEEQYKNANEQYIYEDMEVMS 896
Query: 427 ------------PGPPYTTDEHLVFNSGKMIVLDKLLKKKKEQGSRVLIFSQMSRLLDIL 474
YT + +SGK+ VL +LL K KE+GSR+L+FSQ +++LDIL
Sbjct: 897 DFELHRLCRSFPTLQSYTLKDDPWMDSGKIRVLKELLPKMKEEGSRILLFSQFTQMLDIL 956
Query: 475 EDYCYFRGYEYCRIDGSTSHDERVEAIDEYNKPNSEKFIFLLTTRAGGLGINLVTADTVV 534
E Y R+DGST + R + ID+++K + +FLL+T+AGG GINL A+ V+
Sbjct: 957 EQVLDTLKISYVRLDGSTQVEVRQDIIDQFHK-EEDVTVFLLSTKAGGFGINLACANVVI 1015
Query: 535 LYDSDWNPQADLQAMDRAHRIGQKKQVFVYRFVTENAIEEKVIERAAQKLRLDQLVIQQG 594
LYD +NP DLQA DRAHR+GQ ++V V R +T+N IEE + + A KL LD + G
Sbjct: 1016 LYDCSYNPFDDLQAEDRAHRVGQVREVTVIRLITDNTIEEYIQKLANTKLALDMSLSSDG 1075
Query: 595 TGKK 598
++
Sbjct: 1076 KDRE 1079
>ECU09g0410 [KL] KOG0387 Transcription-coupled repair protein CSB/RAD26
(contains SNF2 family DNA-dependent ATPase domain)
Length = 695
Score = 275 bits (703), Expect = 3e-73
Identities = 171/487 (35%), Positives = 267/487 (54%), Gaps = 60/487 (12%)
Query: 139 YQVYGLNWLISLHESKLSGILADEMGLGKTLQSISFLGYLRYIKGIEGPYIVIVPKSTLD 198
YQ G+ W++ L+ + G+LAD+MGLGKT+Q I FLG L + + + +++ P + +
Sbjct: 154 YQQDGVRWMLRLYRDEKGGVLADDMGLGKTIQVIVFLGALLHSR-VVSKALILCPATIVS 212
Query: 199 NWQREFAKWTPEVKTVILQGDKDFRKELIETKILTCNFDVLITSYEMVLKEKLTLKRFAW 258
W E+ ++ P V+ ++D V + SYE K K +K F W
Sbjct: 213 QWMDEWKRFYPFVRIFFGFPNEDCE-------------GVYLMSYE---KFKAGVKNFLW 256
Query: 259 EYILIDEAHRIKNEQSALSQVIRLFYSKNRLLITGTPLQNNLHELWALLNFLLPDVFGD- 317
+ +++DE HRIKN+ + ++ ++ S+ R +++GTP+QNNL ELW++ +F+ P + G
Sbjct: 257 DVLILDEGHRIKNKNAQITLSVKKARSRGRFVLSGTPIQNNLGELWSIFDFVNPGLLGSH 316
Query: 318 ---SEVFDEWFQQNGKEEDQEVVVQQ-------LHSVLQPFLLRRVKSEVEKSLLPKKEI 367
+E F+E ++ G + V++ L S+++P++LRR KS+V L K++
Sbjct: 317 TSFNEEFEEVIRRGGYRNASNLQVEKAYRHSLMLRSLIEPYILRRTKSQVSHKLPSKEDK 376
Query: 368 NLYVGMTDMQIEWYKSLLE-KDIDAVNGAVGKREGKTRLLNIVMQLRKCCNHPYLFEGAE 426
++ +T QIE Y +LE K I V GK LL+ + LRK CNHP L +
Sbjct: 377 IVFCSLTPAQIELYNRVLESKHIMKV------LTGKANLLSGISMLRKVCNHPRLLFPRK 430
Query: 427 PGPPYTTDEH----------------------LVFNSGKMIVLDKLLKKKKEQGSRVLIF 464
G +E LV +S K+ +L LLKK + +G++VL+F
Sbjct: 431 LGVSEDCEEEASDEKNGEDEALELPGADVSYDLVSSSCKIKILVDLLKKWRSEGNKVLVF 490
Query: 465 SQMSRLLDILEDYCYFRGYEYCRIDGSTSHDERVEAIDEYNKPNSEKFIFLLTTRAGGLG 524
SQ R+LDI+E R Y Y R+DG T R +D +N+ + + F+FLLTT+ GGLG
Sbjct: 491 SQTIRMLDIIERCV--RKYTYLRMDGRTPTSSRPGLVDRFNE-DEDVFLFLLTTKVGGLG 547
Query: 525 INLVTADTVVLYDSDWNPQADLQAMDRAHRIGQKKQVFVYRFVTENAIEEKVIERAAQKL 584
+NL A +V+YD DWNP D QA +RA R GQKK V +YRFV ++ IEEKV ++ K
Sbjct: 548 LNLTGASRIVIYDPDWNPSTDTQAKERAWRYGQKKGVEIYRFVCKDTIEEKVYQKQIFKD 607
Query: 585 RLDQLVI 591
L + V+
Sbjct: 608 LLGKKVL 614
>YAL019w [B] KOG0389 SNF2 family DNA-dependent ATPase
Length = 1131
Score = 274 bits (701), Expect = 5e-73
Identities = 197/560 (35%), Positives = 295/560 (52%), Gaps = 89/560 (15%)
Query: 133 EGKLRDYQVYGLNWLISLHESKLSGILADEMGLGKTLQSISFLGYLRYIKGIEGPYIVIV 192
E L+DYQ G+NWL L+++K+S ILAD+MGLGKT Q ISF YL+ I GP++V+V
Sbjct: 569 EISLKDYQQTGINWLNLLYQNKMSCILADDMGLGKTCQVISFFAYLKQINE-PGPHLVVV 627
Query: 193 PKSTLDNWQREFAKWTPEVKTVILQGDKDFRKELIETKILTCN---FDVLITSYEMVLKE 249
P STL+NW REF K+ P +K G R+EL + IL N +DV++T+Y +
Sbjct: 628 PSSTLENWLREFQKFAPALKIEPYYGSLQEREELRD--ILERNAGKYDVIVTTYNLAAGN 685
Query: 250 KLT---LKRFAWEYILIDEAHRIKNEQSALSQVIRLFYSKNRLLITGTPLQNNLHELWAL 306
K LK + ++ DE H +KN S + + RLL+TGTPLQNNL EL +L
Sbjct: 686 KYDVSFLKNRNFNVVVYDEGHMLKNSTSERFAKLMKIRANFRLLLTGTPLQNNLKELMSL 745
Query: 307 LNFLLPDVF-GDSEVFDEWFQQNGKEEDQ---------EVVVQQLHSVLQPFLLRRVKSE 356
L F++P++F E FD F+Q K D + + + ++++PF+LRR K +
Sbjct: 746 LEFIMPNLFISKKESFDAIFKQRAKTTDDNKNHNPLLAQEAITRAKTMMKPFILRRRKDQ 805
Query: 357 VEKSLLPKKEINLYVGMTDMQIEWYKSLLEKDIDAV--------NGAVGK-REGKTRL-- 405
V K L PK Y + +Q K + +K+I V +G + K + K++L
Sbjct: 806 VLKHLPPKHTHIQYCELNAIQ----KKIYDKEIQIVLEHKRMIKDGELPKDAKEKSKLQS 861
Query: 406 ---LNIVMQLRKCCNHPYLFEG--------------------AEPGP------------- 429
N++M LRK HP LF AE G
Sbjct: 862 SSSKNLIMALRKASLHPLLFRNIYNDKIITKMSDAILDEPAYAENGNKEYIKEDMSYMTD 921
Query: 430 ----------PYTTDEHLVFN-----SGKMIVLDKLLKK-KKEQGSRVLIFSQMSRLLDI 473
P T ++ + N SGK+ L KLLK ++ +VLIFS +++LDI
Sbjct: 922 FELHKLCCNFPNTLSKYQLHNDEWMQSGKIDALKKLLKTIIVDKQEKVLIFSLFTQVLDI 981
Query: 474 LEDYCYFRGYEYCRIDGSTSHDERVEAIDEYNKPNSEKFIFLLTTRAGGLGINLVTADTV 533
LE Y++ R+DGST ++R ID++ + + + IF+L+T+AGG GINLV A+ V
Sbjct: 982 LEMVLSTLDYKFLRLDGSTQVNDRQLLIDKFYE-DKDIPIFILSTKAGGFGINLVCANNV 1040
Query: 534 VLYDSDWNPQADLQAMDRAHRIGQKKQVFVYRFVTENAIEEKVIERAAQKLRLDQLVIQQ 593
+++D +NP D QA DRAHR+GQ K+V + +T+++IEEK+ + A KL LD + +
Sbjct: 1041 IIFDQSFNPHDDRQAADRAHRVGQTKEVNITTLITKDSIEEKIHQLAKNKLALDSYISED 1100
Query: 594 GTGKKTSALTNNKDDLIDMI 613
K L + D+++ I
Sbjct: 1101 --KKSQDVLESKVSDMLEDI 1118
>SPAC20G8.08c [B] KOG0389 SNF2 family DNA-dependent ATPase
Length = 944
Score = 273 bits (699), Expect = 8e-73
Identities = 188/520 (36%), Positives = 273/520 (52%), Gaps = 72/520 (13%)
Query: 126 QSPSFIKEG-KLRDYQVYGLNWLISLHESKLSGILADEMGLGKTLQSISFLGYLRYIKGI 184
Q PS I G L+ YQ+ GLNWL ++++KLSGILADEMGLGKT Q ISFL L+ KGI
Sbjct: 403 QQPSSIASGITLKSYQIVGLNWLCLMYKAKLSGILADEMGLGKTCQVISFLASLKE-KGI 461
Query: 185 EGPYIVIVPKSTLDNWQREFAKWTPEVKTVILQGDKDFRKELIETKILTCNFDVLITSYE 244
+ ++V+VP STL NW REF K+ P ++ G + R ++ +FDVL+T+Y+
Sbjct: 462 QNRHLVVVPSSTLGNWLREFEKFCPSLRVESYSGTQSERINK-RYYLMDTDFDVLVTTYQ 520
Query: 245 MV---LKEKLTLKRFAWEYILIDEAHRIKNEQSALSQVIRLFYSKNRLLITGTPLQNNLH 301
+ ++ L++ ++ + DE H +KN S + + + RLLITGTPLQNNL
Sbjct: 521 LASGSRDDRSFLRKQRFDISIFDEGHYLKNRMSERYKHLMNIPANFRLLITGTPLQNNLK 580
Query: 302 ELWALLNFLLPDVFGDSEVFDEWFQQNGKEEDQEVV--------VQQLHSVLQPFLLRRV 353
EL +LL F+LP VF ++ + + D ++ + + +++ PF+LRR
Sbjct: 581 ELISLLAFMLPKVFDNNMQGLDIIYKIKTTSDGDIERAYLSQERISRAKTIMNPFILRRR 640
Query: 354 KSEVEKSLLPKKEINLYVGMTDMQIEWYKSLLEKDIDAVNGAVGKREGKTRLLNIVMQLR 413
K V L PK + Y M + Q+ Y S+LE N RE NI+MQLR
Sbjct: 641 KENVLSDLPPKIQHVEYCHMEETQLSLYLSVLE----LKNLVNANRE------NILMQLR 690
Query: 414 KCCNHPYLFEG--------------------AEPGPPYTTDEHLV--------------- 438
K H LF + P Y ++ V
Sbjct: 691 KAALHQLLFRSQYNLETLSLMSKRILREDAYLDANPQYIFEDMEVMSDFELHKLADQYRH 750
Query: 439 -----------FNSGKMIVLDKLLKKKKEQGSRVLIFSQMSRLLDILEDYCYFRGYEYCR 487
+S K+ L LLKK + R+LIFSQ +++LDILE E+ R
Sbjct: 751 LHPFALKGKPWMDSAKVKKLCSLLKKSR-PNERILIFSQFTQVLDILEYVLNTLDLEFLR 809
Query: 488 IDGSTSHDERVEAIDEYNKPNSEKFIFLLTTRAGGLGINLVTADTVVLYDSDWNPQADLQ 547
+DGST + R + ID+++ + K +FLL+T++GG GINL A+ V+L+D +NP D+Q
Sbjct: 810 LDGSTPVETRQQLIDDFHTNENYK-VFLLSTKSGGFGINLTCANIVILFDCSFNPFDDMQ 868
Query: 548 AMDRAHRIGQKKQVFVYRFVTENAIEEKVIERAAQKLRLD 587
A DRAHR+GQ + V VYR +T+N IEE + A KL L+
Sbjct: 869 AEDRAHRVGQTRPVHVYRLITKNTIEENIRRLANTKLTLE 908
>YJR035w [KL] KOG0387 Transcription-coupled repair protein CSB/RAD26
(contains SNF2 family DNA-dependent ATPase domain)
Length = 1085
Score = 273 bits (697), Expect = 1e-72
Identities = 190/619 (30%), Positives = 309/619 (49%), Gaps = 94/619 (15%)
Query: 136 LRDYQVYGLNWLISLHESKLSGILADEMGLGKTLQSISFLGYLRYIKGIEGPYIVIVPKS 195
L +YQ + WL L++ GI+ DEMGLGKT+Q I+F+ L + + GP +++ P +
Sbjct: 297 LFNYQKTCVQWLYELYQQNCGGIIGDEMGLGKTIQVIAFIAALHHSGLLTGPVLIVCPAT 356
Query: 196 TLDNWQREFAKWTPEVKTVILQG-------DKDFR------------------------- 223
+ W EF W P ++TVIL D+ F+
Sbjct: 357 VMKQWCNEFQHWWPPLRTVILHSMGSGMASDQKFKMDENDLENLIMNSKPSDFSYEDWKN 416
Query: 224 ----KELIET---------KILTCNFDVLITSYEMVLKEKLTLKRFAWEYILIDEAHRIK 270
K+ +E+ K++T + +LIT+Y + L + W+Y ++DE H+I+
Sbjct: 417 STRTKKALESSYHLDKLIDKVVT-DGHILITTYVGLRIHSDKLLKVKWQYAVLDEGHKIR 475
Query: 271 NEQSALSQVIRLFYSKNRLLITGTPLQNNLHELWALLNFLLPDVFGDSEVFDEWF----Q 326
N S +S + + NR++++GTP+QNNL ELW+L +F+ P G VF + F
Sbjct: 476 NPDSEISLTCKKLKTHNRIILSGTPIQNNLTELWSLFDFIFPGKLGTLPVFQQQFVIPIN 535
Query: 327 QNGKEEDQEVVVQQ-------LHSVLQPFLLRRVKSEVEKSLLPKKEINLYVGMTDMQIE 379
G + VQ L ++ P+LLRRVK++V K L KKE+ L+ +T Q
Sbjct: 536 IGGYANATNIQVQTGYKCAVALRDLISPYLLRRVKADVAKDLPQKKEMVLFCKLTKYQRS 595
Query: 380 WYKSLLEK-DIDAVNGAVGKREGKTRLLNIVMQLRKCCNHPYLFEG--AEPGPPYTTDEH 436
Y L D++ + + GK +L + LRK CNHP L + P Y +
Sbjct: 596 KYLEFLHSSDLNQI------QNGKRNVLFGIDILRKICNHPDLLDRDTKRHNPDYGDPKR 649
Query: 437 LVFNSGKMIVLDKLLKKKKEQGSRVLIFSQMSRLLDILEDYCYFRGYE-----YCRIDGS 491
SGKM V+ +LL +QG + L+F+Q ++LDILE++ + + Y R+DG+
Sbjct: 650 ----SGKMQVVKQLLLLWHKQGYKALLFTQSRQMLDILEEFISTKDPDLSHLNYLRMDGT 705
Query: 492 TSHDERVEAIDEYNKPNSEKFIFLLTTRAGGLGINLVTADTVVLYDSDWNPQADLQAMDR 551
T+ R +D +N + + +FLLTTR GGLG+NL A+ ++++D DWNP D+QA +R
Sbjct: 706 TNIKGRQSLVDRFNNESFD--VFLLTTRVGGLGVNLTGANRIIIFDPDWNPSTDMQARER 763
Query: 552 AHRIGQKKQVFVYRFVTENAIEEKVIERAAQKLRLDQLVIQQGTGKKTSALTNNKDDLID 611
A RIGQK++V +YR + +IEEK+ R K L ++ K+ + +L D
Sbjct: 764 AWRIGQKREVSIYRLMVGGSIEEKIYHRQIFKQFLTNRILTDPKQKRFFKI----HELHD 819
Query: 612 MIQFGARDMLQHGSGNITVDEDIDEILKKGERKTLELNAKYESLGLDDLQKFNGMADQSA 671
+ G G + +E +E+ K E L+ + ES + L +G++ +
Sbjct: 820 LFSLG-------GENGYSTEELNEEVQKHTE--NLKNSKSEESDDFEQLVNLSGVSKLES 870
Query: 672 YEWNGTNFEKKKPDDHTVD 690
+ +NG ++KK + T D
Sbjct: 871 F-YNG---KEKKENSKTED 885
>SPAC25A8.01c [B] KOG0389 SNF2 family DNA-dependent ATPase
Length = 922
Score = 268 bits (685), Expect = 3e-71
Identities = 188/530 (35%), Positives = 273/530 (51%), Gaps = 75/530 (14%)
Query: 129 SFIKEGKLRDYQVYGLNWLISLHESKLSGILADEMGLGKTLQSISFLGYLRYIKGIEGPY 188
SF + KL+DYQ+ G+NWL L+E KL+GILADEMGLGKT Q+I+F L K I GP+
Sbjct: 380 SFSPDIKLQDYQIIGINWLYLLYELKLAGILADEMGLGKTCQTIAFFSLL-MDKNINGPH 438
Query: 189 IVIVPKSTLDNWQREFAKWTPEVKTVILQGDKDFRKELIE-TKILTCNFDVLITSYEMVL 247
+VI P ST++NW REFAK+ P++K + G + R+E+ E +++V++T+Y +
Sbjct: 439 LVIAPASTMENWLREFAKFCPKLKIELYYGSQVEREEIRERINSNKDSYNVMLTTYRLAA 498
Query: 248 KEK---LTLKRFAWEYILIDEAHRIKNEQSALSQVIRLFYSKNRLLITGTPLQNNLHELW 304
K L L+ + + DE H +KN S + + + R+L+TGTPLQNNL EL
Sbjct: 499 TSKADRLFLRNQKFNVCVYDEGHYLKNRASERYRHLMSIPADFRVLLTGTPLQNNLKELI 558
Query: 305 ALLNFLLPDVF--GDSEVFDEWFQQNGKEED------QEVVVQQLHSVLQPFLLRRVKSE 356
+LL F+LP VF G + + + E D E V + ++ PF+LRR KS+
Sbjct: 559 SLLAFILPHVFDYGLKSLDVIFTMKKSPESDFERALLSEQRVSRAKMMMAPFVLRRKKSQ 618
Query: 357 VEKSLLPKKEINLYVGMTDMQIEWYKSLLEKDIDAVNGAVGKREGKTRLLN--------- 407
V +L K I + ++ + Y K +VN + + KT L
Sbjct: 619 VLDALPKKTRIIEFCEFSEEERRRYDDFASK--QSVNSLLDENVMKTNLDTNANLAKKKS 676
Query: 408 ----IVMQLRKCCNHPYLF-------------EGAEPGPPYTTDEHLV------------ 438
+++QLRK +HP LF + P Y L
Sbjct: 677 TAGFVLVQLRKLADHPMLFRIHYKDDILRQMAKAIMNEPQYKKANELYIFEDMQYMSDIE 736
Query: 439 ---------------------FNSGKMIVLDKLLKKKKEQGSRVLIFSQMSRLLDILEDY 477
++ K+ L KLL E G RV++FSQ +++LDIL+
Sbjct: 737 LHNLCCKFPSINSFQLKDEPWMDATKVRKLKKLLTNAVENGDRVVLFSQFTQVLDILQLV 796
Query: 478 CYFRGYEYCRIDGSTSHDERVEAIDEYNKPNSEKFIFLLTTRAGGLGINLVTADTVVLYD 537
++ R DGST D R + ID++ S +FLL+T+AGG GINL A+ V+LYD
Sbjct: 797 MKSLNLKFLRFDGSTQVDFRQDLIDQFYADESIN-VFLLSTKAGGFGINLACANMVILYD 855
Query: 538 SDWNPQADLQAMDRAHRIGQKKQVFVYRFVTENAIEEKVIERAAQKLRLD 587
+NP DLQA DRAHR+GQKK+V VY+FV ++ IEE + A K+ LD
Sbjct: 856 VSFNPFDDLQAEDRAHRVGQKKEVTVYKFVVKDTIEEHIQRLANAKIALD 905
>CE16277 [B] KOG0389 SNF2 family DNA-dependent ATPase
Length = 1038
Score = 262 bits (670), Expect = 2e-69
Identities = 206/667 (30%), Positives = 324/667 (47%), Gaps = 113/667 (16%)
Query: 131 IKEG-KLRDYQVYGLNWLISLHESKLSGILADEMGLGKTLQSISFLGYLRYIKGIEGPYI 189
+KEG L DYQ+ G+ WLI ++ L+ IL DEMGLGKT+Q ++FL YL+ I G GP++
Sbjct: 388 LKEGCTLHDYQLIGVKWLIMMYNKDLNAILGDEMGLGKTIQIVAFLSYLKQI-GKTGPHL 446
Query: 190 VIVPKSTLDNWQREFAKWTPEVKTVILQGDKDFRKEL-IETKILTCNFDVLITSYEMVLK 248
++VP ST++NW EF KW P ++ + G +D RK L K + DV++T+Y MV
Sbjct: 447 IVVPSSTIENWIGEFHKWCPSIQLLTYYGSQDERKHLRHRVKKQKDHIDVILTTYNMVTS 506
Query: 249 ---EKLTLKRFAWEYILIDEAHRIKNEQSALSQVIRLFYSKNRLLITGTPLQNNLHELWA 305
+K K F+ Y++ DE H +KN S + + K ++L+TGTPLQNNL EL +
Sbjct: 507 KSDDKKFFKNFSLNYVIYDEGHMLKNCDSERYRGLMKVKGKKKILLTGTPLQNNLIELIS 566
Query: 306 LLNFLLPDVFG----DSEVFDEWFQQNGKEED-------QEVVVQQLHSVLQPFLLRRVK 354
L+ F+L VF D + F+Q G D Q+ +++ ++LQP++LRR+K
Sbjct: 567 LMYFVLSKVFNKYCEDITHLLQHFKQLGPALDTKNKALYQQDRIEEAKAILQPYILRRLK 626
Query: 355 SEVEKSLLPKKEINLYVGMTDMQIEWYKSLLEKDIDAVNGAVGKREGKTRLLNIVMQLRK 414
++V SL K E + V M Q + Y +++E A+ + E +M+LR+
Sbjct: 627 NQVLGSLPSKSEQIIEVEMKKPQKQLYDNIVE--------ALQQSEESGDSYGSLMRLRQ 678
Query: 415 CCNHPYLFEGAEPGPPYTTDEHLVFNSGKMIVLDKLLKKKKEQ----------------- 457
NHP L TD+ L + + + +K KK Q
Sbjct: 679 AANHPLLRRSE------YTDQKLDKIAKMLCLREKAYADKKWQHVSEDLAWLSDIKIHQL 732
Query: 458 ------GSRVLIFSQMS------RLLDI------------------------LEDYCYFR 481
S+ L+ Q++ LD+ LE Y R
Sbjct: 733 CERFRCTSKFLLNEQLALKSGKCEQLDVMLPEIQKKGDKVLIFSQFTSMLDILEVYLNIR 792
Query: 482 GYEYCRIDGSTSHDERVEAIDEYNKPNSEKFIFLLTTRAGGLGINLVTADTVVLYDSDWN 541
GY Y R+DG T +R E I+E+N + + F+FLL+TRAGGLGINL +A+ ++++D D+N
Sbjct: 793 GYSYKRLDGQTPVLDRQEMINEFNL-SKDLFVFLLSTRAGGLGINLTSANHIIIHDIDFN 851
Query: 542 PQADLQAMDRAHRIGQKKQVFVYRFVTENAIEEKVIERAAQKLRLDQLVIQQGTGKKTSA 601
P D QA DR HR+GQ+K V V R V++ +E ++ A +KL+L++ V G+
Sbjct: 852 PYNDKQAEDRCHRMGQEKPVHVTRLVSKGTVEVGMLALAKKKLQLEKQVTDGVKGQLDEV 911
Query: 602 -LTNNKDDLIDMIQFGARDMLQHGSGNITVDEDIDEILKKGER------------KTLEL 648
N L++ I+ + ++ +I EI KK + + L+
Sbjct: 912 HFIENFKFLLEEIEI----YRKFRKFDLFKSPNIPEIQKKKSKNSDFFTGKKYALRELKE 967
Query: 649 NAKYESLGLDDLQK---------FNGMADQSAYEWNGTNFEK--KKPDDHTVDWINPPKR 697
E G DL K ++ + D S NG + E+ KK D+ + + ++
Sbjct: 968 EEGGEQCGGRDLSKLLSSAISGRYDDVEDDSGDSKNGIDAEEAAKKEDEAVKEPVEKEQQ 1027
Query: 698 ERRREQP 704
+ QP
Sbjct: 1028 KEEESQP 1034
>SPBC1826.01c [K] KOG0392 SNF2 family DNA-dependent ATPase domain-containing
protein
Length = 635
Score = 262 bits (669), Expect = 2e-69
Identities = 195/617 (31%), Positives = 296/617 (47%), Gaps = 89/617 (14%)
Query: 136 LRDYQVYGLNWLISLHESKLSGILADEMGLGKTLQSISFLGYLRYI-----------KGI 184
LR YQ G+NWL L++ +L GIL D+MGLGKTLQ+I + Y K
Sbjct: 40 LRKYQQEGVNWLAFLNKYELHGILCDDMGLGKTLQTICIVASDHYNRQKLFEESGSPKFA 99
Query: 185 EGPYIVIVPKSTLDNWQREFAKWTPEVKTVILQGDKDFRKELIETKILTCNFDVLITSYE 244
P +++ P + +WQ+E + + P +K G R + I +K+ DV++TSY+
Sbjct: 100 HVPSLIVCPSTLAGHWQQELSTYAPFLKVSAYVGPPAERAK-IRSKMKKS--DVVVTSYD 156
Query: 245 MVLKEKLTLKRFAWEYILIDEAHRIKNEQSALSQVIRLFYSKNRLLITGTPLQNNLHELW 304
+ + L + W Y ++DE H IKN ++ L++ ++ S +RL+++GTP+QNN+ ELW
Sbjct: 157 ICRNDVDELVKIDWNYCVLDEGHVIKNARAKLTKAVKSLRSYHRLILSGTPIQNNVLELW 216
Query: 305 ALLNFLLPDVFGDSEVFDEWF----------QQNGKEEDQ-EVVVQQLHSVLQPFLLRRV 353
+L +FL+P G + F E F + + KE ++ + ++ +H + PF+LRR+
Sbjct: 217 SLFDFLMPGFLGTEKTFQERFVRPIAASRDAKSSSKERERGTLALEAIHKQVLPFMLRRL 276
Query: 354 KSEVEKSLLPKKEINLYVGMTDM----------QIEWYKSLLEKDIDAVNGAVGKREGKT 403
K +V L PK + Y M+D+ Q+ + L + + + G K+ K
Sbjct: 277 KEDVLADLPPKIIQDYYCDMSDLQRKLLNDFVSQLNINEELEDDETEKTQGTRKKKSQKA 336
Query: 404 RLLNIVMQLRKCCNHPYL-FEGAEPGPPYTTDEHLVFNSG--------KMIVLDKLLK-- 452
+ + +RK CNHP L P + NSG K+ L +LL+
Sbjct: 337 HIFQALQYMRKLCNHPALILTEKHPKRNAIVKQLAKENSGLHDLKHAPKLTALGQLLRDC 396
Query: 453 ----------------KKKEQGSRVLIFSQMSRLLDILED---YCYFRGYEYCRIDGSTS 493
RVLIF Q+ +LD++E Y R+DGS
Sbjct: 397 GLGNSSVNSNGIDSALTNAVSEHRVLIFCQLKDMLDMVEKDLLQATMPDVTYMRLDGSVE 456
Query: 494 HDERVEAIDEYNKPNSEKFIFLLTTRAGGLGINLVTADTVVLYDSDWNPQADLQAMDRAH 553
+R EA+ ++N S + LLTT GGLG+NL ADTV+ + DWNP DLQAMDRAH
Sbjct: 457 PTKRQEAVTKFNNDPSID-VLLLTTHVGGLGLNLTGADTVIFVEHDWNPMRDLQAMDRAH 515
Query: 554 RIGQKKQVFVYRFVTENAIEEKVIERAAQKLRLDQLVIQQGTGKKTSALTNNKDDLIDMI 613
RIGQKK V VYR +T +EEK++ K+ + V+ Q +S T D ++D+
Sbjct: 516 RIGQKKVVNVYRLITRGCLEEKIMGLQRFKMNVASTVVNQQNAGLSSIGT---DQILDLF 572
Query: 614 QFGARDMLQHGSGNITVDEDIDEI---LKKGERKTLELNAKYESLGLDDLQKFNGMADQS 670
A + Q NI +E D L +K LE GL + M D+S
Sbjct: 573 NTTADE--QQTVQNIDKEESEDAAGRGLSGTSKKALE--------GLPE------MWDES 616
Query: 671 AY-EWNGTNFEKKKPDD 686
Y E+N F P D
Sbjct: 617 QYDEFNLDGFISTLPKD 633
>SPCP25A2.02c [KL] KOG0387 Transcription-coupled repair protein CSB/RAD26
(contains SNF2 family DNA-dependent ATPase domain)
Length = 973
Score = 261 bits (666), Expect = 5e-69
Identities = 197/630 (31%), Positives = 303/630 (47%), Gaps = 99/630 (15%)
Query: 139 YQVYGLNWLISLHESKLSGILADEMGLGKTLQSISFLGYLRYIKGIEGPYIVIVPKSTLD 198
YQV + WL L+ + GI+ DEMGLGKT+Q +SFL L + + P +++ P + +
Sbjct: 280 YQVTCVQWLWELYCQEAGGIIGDEMGLGKTIQIVSFLSSLHHSGKFQKPALIVCPATLMK 339
Query: 199 NWQREFAKWTPEVKTVIL---------------------QGDKDFRKELIETKILTCNFD 237
W EF W ++ V+L + + + K I+ + + +F
Sbjct: 340 QWVNEFHTWWAPLRVVVLHATGSGQRASREKRQYESDASESEAEESKTSIKLRGASSSFH 399
Query: 238 ---------------VLITSYE-MVLKEKLTLKRFAWEYILIDEAHRIKNEQSALSQVIR 281
+LIT+Y + + L L R W Y ++DE H+I+N S +S +
Sbjct: 400 RYAKNLVESVFTRGHILITTYAGLRIYGDLILPR-EWGYCVLDEGHKIRNPDSEISISCK 458
Query: 282 LFYSKNRLLITGTPLQNNLHELWALLNFLLPDVFGDSEVFDEWFQQ----NGKEEDQEVV 337
+ NR++++GTP+QNNL ELW L +F+ P G VF F G V
Sbjct: 459 QIRTVNRIILSGTPIQNNLTELWNLFDFVFPGRLGTLPVFQNQFALPINIGGYANASNVQ 518
Query: 338 VQ-------QLHSVLQPFLLRRVKSEVEKSLLPKKEINLYVGMTDMQIEWYKSLLE-KDI 389
VQ L ++ P+LLRR+K +V L K E L+ +T +Q + Y+ L+ D+
Sbjct: 519 VQTAYKCACMLRDLISPYLLRRMKLDVAADLPKKSEQVLFCKLTPLQRKAYQDFLQGSDM 578
Query: 390 DAVNGAVGKREGKTRLLNIVMQLRKCCNHPYLFEGAEPGPPYTTDEHLVFN--------- 440
+ GK ++L + LRK CNHP L T E+L+
Sbjct: 579 QKI------LNGKRQMLYGIDILRKICNHPDL----------VTREYLLHKEDYNYGDPE 622
Query: 441 -SGKMIVLDKLLKKKKEQGSRVLIFSQMSRLLDILE-DYCYFRGYEYCRIDGSTSHDERV 498
SGK+ V+ LL K+QG R L+FSQ ++LDILE YCR+DGSTS R
Sbjct: 623 KSGKLKVIRALLTLWKKQGHRTLLFSQTRQMLDILEIGLKDLPDVHYCRMDGSTSIALRQ 682
Query: 499 EAIDEYNKPNSEKFIFLLTTRAGGLGINLVTADTVVLYDSDWNPQADLQAMDRAHRIGQK 558
+ +D +NK N +FLLTTR GGLG+NL AD V+L+D DWNP D QA +RA R+GQK
Sbjct: 683 DLVDNFNK-NEYFDVFLLTTRVGGLGVNLTGADRVILFDPDWNPSTDAQARERAWRLGQK 741
Query: 559 KQVFVYRFVTENAIEEKVIERAAQKLRLDQLVIQQGTGKKTSALT---------NNKDDL 609
K V VYR +T IEEK+ R K L +++ ++ +T +NK +
Sbjct: 742 KDVVVYRLMTAGTIEEKIYHRQIFKQFLTNKILKDPKQRRFFKMTDLHDLFTLGDNKTEG 801
Query: 610 ID--MIQFGARDMLQ--HGSGNITVDEDIDEILKKGER-----KTLELNAKYESLGLDDL 660
+ + G+ +L+ + S N EDI +K + K + + +E +G+ +
Sbjct: 802 TETGSMFLGSERVLRKDNSSRNGNEAEDIPARDRKKHKIHDKGKKVNSSKVFEKMGIASM 861
Query: 661 QKFNGMADQSAYEWNGTNFEKKKPDDHTVD 690
+K+ + + + TN + DD +D
Sbjct: 862 EKYKPPQESNVTK---TNSDSTLGDDSVLD 888
>At3g54280 [K] KOG0392 SNF2 family DNA-dependent ATPase domain-containing
protein
Length = 2049
Score = 253 bits (646), Expect = 1e-66
Identities = 186/584 (31%), Positives = 291/584 (48%), Gaps = 86/584 (14%)
Query: 135 KLRDYQVYGLNWLISLHESKLSGILADEMGLGKTLQSISFLGY-LRYIKGIEG-----PY 188
+LR YQ G+NWL L KL GIL D+MGLGKTLQ+ + + +G P
Sbjct: 1443 QLRRYQQEGINWLGFLKRFKLHGILCDDMGLGKTLQASAIVASDAAERRGSTDELDVFPS 1502
Query: 189 IVIVPKSTLDNWQREFAKWTPEVKTVILQ--GDKDFRKELIETKILTCNFDVLITSYEMV 246
I++ P + + +W E K+ +LQ G R L E N +V+ITSY++V
Sbjct: 1503 IIVCPSTLVGHWAFEIEKYIDLSLLSVLQYVGSAQDRVSLREQ---FNNHNVIITSYDVV 1559
Query: 247 LKEKLTLKRFAWEYILIDEAHRIKNEQSALSQVIRLFYSKNRLLITGTPLQNNLHELWAL 306
K+ L +F+W Y ++DE H IKN +S ++ ++ +++RL+++GTP+QNN+ ELW+L
Sbjct: 1560 RKDVDYLTQFSWNYCILDEGHIIKNAKSKITAAVKQLKAQHRLILSGTPIQNNIMELWSL 1619
Query: 307 LNFLLPDVFGDSEVFDEWFQQ----------NGKEEDQEVV-VQQLHSVLQPFLLRRVKS 355
+FL+P G F + + + K+ + V+ ++ LH + PFLLRR K
Sbjct: 1620 FDFLMPGFLGTERQFQASYGKPLLAARDPKCSAKDAEAGVLAMEALHKQVMPFLLRRTKE 1679
Query: 356 EVEKSLLPKKEINLYVGMTDMQIEWYK------------SLLEKD--IDAVNGAVGKREG 401
EV L K + Y ++ +Q++ Y+ S+++ D D+ N V +
Sbjct: 1680 EVLSDLPEKIIQDRYCDLSPVQLKLYEQFSGSSAKQEISSIIKVDGSADSGNADVAPTKA 1739
Query: 402 KTRLLNIVMQLRKCCNHPYLFEGAEPGPPYT--------------TDEHLVFNSGKMIVL 447
T + + L K C+HP L G + P T+ H V +S K++ L
Sbjct: 1740 STHVFQALQYLLKLCSHPLLVLGDKVTEPVASDLAAMINGCSDIITELHKVQHSPKLVAL 1799
Query: 448 DKLLKK-------KKEQGS------RVLIFSQMSRLLDILED---YCYFRGYEYCRIDGS 491
++L++ G+ RVLIF+Q LLDI+E + + Y R+DGS
Sbjct: 1800 QEILEECGIGSDASSSDGTLSVGQHRVLIFAQHKALLDIIEKDLFQAHMKSVTYMRLDGS 1859
Query: 492 TSHDERVEAIDEYNK-PNSEKFIFLLTTRAGGLGINLVTADTVVLYDSDWNPQAD----- 545
++R E + +N P + + LLTT GGLG+NL +ADT+V + DWNP D
Sbjct: 1860 VVPEKRFEIVKAFNSDPTID--VLLLTTHVGGLGLNLTSADTLVFMEHDWNPMRDHQFAN 1917
Query: 546 ------LQAMDRAHRIGQKKQVFVYRFVTENAIEEKVIERAAQKLRLDQLVIQQGTGKKT 599
QAMDRAHR+GQK+ V V+R + +EEKV+ K+ + VI +
Sbjct: 1918 IELNKLWQAMDRAHRLGQKRVVNVHRLIMRGTLEEKVMSLQKFKVSVANTVI---NAENA 1974
Query: 600 SALTNNKDDLIDMIQFGARDMLQHGSGNITV-DEDIDEILKKGE 642
S T N D L+D+ F + + + G G+ ED D+I G+
Sbjct: 1975 SMKTMNTDQLLDL--FASAETSKKGGGSSKKGSEDNDQIAGTGK 2016
>7300091 [K] KOG0392 SNF2 family DNA-dependent ATPase domain-containing
protein
Length = 1861
Score = 248 bits (632), Expect = 5e-65
Identities = 174/540 (32%), Positives = 267/540 (49%), Gaps = 52/540 (9%)
Query: 135 KLRDYQVYGLNWLISLHESKLSGILADEMGLGKTLQSISFLG----YLRYIKGIEGPYIV 190
+LR YQ G+NWL L++ L GIL D+MGLGKTLQ+I L + + P +V
Sbjct: 1287 ELRCYQQAGINWLWFLNKYNLHGILCDDMGLGKTLQTICILAGDHMHRQTANLANLPSLV 1346
Query: 191 IVPKSTLDNWQREFAKWTPE---VKTVILQGDKDFRKELIETKILTCNFDVLITSYEMVL 247
I P + +W E K+ + ++ + G R++L CN +++ SY+ V
Sbjct: 1347 ICPPTLTGHWVYEVEKFLDQGSVLRPLHYYGFPVGREKLRSDIGTKCN--LVVASYDTVR 1404
Query: 248 KEKLTLKRFAWEYILIDEAHRIKNEQSALSQVIRLFYSKNRLLITGTPLQNNLHELWALL 307
K+ + Y ++DE H IKN ++ S+ I+ + +RL+++GTP+QNN+ ELW+L
Sbjct: 1405 KDIDFFSGIHFNYCVLDEGHIIKNGKTKSSKAIKRLKANHRLILSGTPIQNNVLELWSLF 1464
Query: 308 NFLLPDVFGDSEVFDEWFQQ----------NGKEEDQEVVVQQ-LHSVLQPFLLRRVKSE 356
+FL+P G + F + F + + KE++ V+ + LH + PFLLRRVK +
Sbjct: 1465 DFLMPGFLGTEKQFVQRFSRPILSSRDAKSSAKEQEAGVLAMEALHRQVLPFLLRRVKED 1524
Query: 357 VEKSLLPKKEINLYVGMTDMQIEWYKSLLEK----------DIDAVNGAVGKREGKTRLL 406
V K L PK +L ++ +Q+ Y+ K D + + KT +
Sbjct: 1525 VLKDLPPKITQDLLCELSPLQLRLYEDFSNKHLKDCLDKLGDSSSASMVTENLSAKTHIF 1584
Query: 407 NIVMQLRKCCNHPYLFEGAEPGPPYTTDEHLVFNSG-------------KMIVLDKLLKK 453
+ L+ CNHP L T + + NS K ++LD +
Sbjct: 1585 QALRYLQNVCNHPKLVLRQSEELTKVTSQLALSNSSLDDIEHSAKLPALKQLLLDCGIGV 1644
Query: 454 KKEQGS--RVLIFSQMSRLLDILEDYCYFR---GYEYCRIDGSTSHDERVEAIDEYNKPN 508
+ E S R LIF Q+ +LDI+E R Y R+DGS +R + ++ +N
Sbjct: 1645 QTESVSQHRALIFCQLKAMLDIVEQDLLRRHLPSVTYLRLDGSVPASQRQDIVNNFNSDP 1704
Query: 509 SEKFIFLLTTRAGGLGINLVTADTVVLYDSDWNPQADLQAMDRAHRIGQKKQVFVYRFVT 568
S + LLTT GGLG+NL ADTV+ + DWNP DLQAMDRAHRIGQKK V VYR +T
Sbjct: 1705 SID-VLLLTTMVGGLGLNLTGADTVIFVEHDWNPMKDLQAMDRAHRIGQKKVVNVYRLIT 1763
Query: 569 ENAIEEKVIERAAQKLRLDQLVIQQGTGKKTSALTNNKDDLIDMIQFGARDMLQHGSGNI 628
N++EEK++ K+ V+ + + S T + D+ G + GS +
Sbjct: 1764 RNSLEEKIMGLQKFKILTANTVV---SAENASLQTMGTSQIFDLFNGGKDKGAESGSSAV 1820
>At3g12810 [R] KOG0391 SNF2 family DNA-dependent ATPase
Length = 1048
Score = 246 bits (628), Expect = 1e-64
Identities = 128/301 (42%), Positives = 190/301 (62%), Gaps = 9/301 (2%)
Query: 130 FIKEGKLRDYQVYGLNWLISLHESKLSGILADEMGLGKTLQSISFLGYLRYIKGIEGPYI 189
F+ + LR+YQ GL+WL++++E KL+GILADEMGLGKT+ +I+ L +L KGI GP++
Sbjct: 115 FLLKHSLREYQHIGLDWLVTMYEKKLNGILADEMGLGKTIMTIALLAHLACDKGIWGPHL 174
Query: 190 VIVPKSTLDNWQREFAKWTPEVKTVILQGDKDFRKELIETKILTCNFDVLITSYEMVLKE 249
++VP S + NW+ EF KW P K + G RK + + +F V IT+Y +V+++
Sbjct: 175 IVVPTSVMLNWETEFLKWCPAFKILTYFGSAKERKLKRQGWMKLNSFHVCITTYRLVIQD 234
Query: 250 KLTLKRFAWEYILIDEAHRIKNEQSALSQVIRLFYSKNRLLITGTPLQNNLHELWALLNF 309
KR W+Y+++DEAH IKN +S Q + F SK R+L+TGTPLQN+L ELW+L++F
Sbjct: 235 SKMFKRKKWKYLILDEAHLIKNWKSQRWQTLLNFNSKRRILLTGTPLQNDLMELWSLMHF 294
Query: 310 LLPDVFGDSEVFDEWF------QQNGKEEDQEVVVQQLHSVLQPFLLRRVKSEVEKSLLP 363
L+P VF + F +WF G+E+ + V+ +LH+VL+PFLLRR+K +VEK L
Sbjct: 295 LMPHVFQSHQEFKDWFCNPIAGMVEGQEKINKEVIDRLHNVLRPFLLRRLKRDVEKQLPS 354
Query: 364 KKEINLYVGMTDMQIEWYKSLLEKDIDAVNGAVGKREGKTRLLNIVMQLRKCCNHPYLFE 423
K E ++ ++ Q Y+ + G G +++I+MQLRK CNHP LFE
Sbjct: 355 KHEHVIFCRLSKRQRNLYEDFIASTETQATLTSGSFFG---MISIIMQLRKVCNHPDLFE 411
Query: 424 G 424
G
Sbjct: 412 G 412
Score = 166 bits (421), Expect = 1e-40
Identities = 84/165 (50%), Positives = 115/165 (68%), Gaps = 2/165 (1%)
Query: 431 YTTDEHLV-FNSGKMIVLDKLLKKKKEQGSRVLIFSQMSRLLDILEDYCYFRGYEYCRID 489
Y D L+ F+ GK+ L LL+K K G R LIF+QM+++LD+LE + GY Y R+D
Sbjct: 648 YFPDRRLIQFDCGKLQELAMLLRKLKFGGHRALIFTQMTKMLDVLEAFINLYGYTYMRLD 707
Query: 490 GSTSHDERVEAIDEYNKPNSEKFIFLLTTRAGGLGINLVTADTVVLYDSDWNPQADLQAM 549
GST +ER + +N N + F+F+L+TR+GG+GINLV ADTV+ YDSDWNP D QA
Sbjct: 708 GSTPPEERQTLMQRFNT-NPKIFLFILSTRSGGVGINLVGADTVIFYDSDWNPAMDQQAQ 766
Query: 550 DRAHRIGQKKQVFVYRFVTENAIEEKVIERAAQKLRLDQLVIQQG 594
DR HRIGQ ++V +YR ++E+ IEE ++++A QK LD LVIQ G
Sbjct: 767 DRCHRIGQTREVHIYRLISESTIEENILKKANQKRVLDNLVIQNG 811
>Hs6912622_2 [L] KOG0390 DNA repair protein SNF2 family
Length = 808
Score = 244 bits (622), Expect = 7e-64
Identities = 165/507 (32%), Positives = 262/507 (51%), Gaps = 60/507 (11%)
Query: 136 LRDYQVYGLNWLISL-----HESKLSGILADEMGLGKTLQSISFLGYLRYIKGIEGPY-- 188
LR +Q G+ +L + ILADEMGLGKTLQ IS + L+ +GPY
Sbjct: 194 LRPHQKEGIIFLYECVMGMRMNGRCGAILADEMGLGKTLQCISLIWTLQ----CQGPYGG 249
Query: 189 -------IVIVPKSTLDNWQREFAKWTPEVKTVILQGDKDFRKELIETKILTCNFDVLIT 241
+++ P S ++NW++EF KW + I D+D + +E I + + VLI
Sbjct: 250 KPVIKKTLIVTPGSLVNNWKKEFQKWLGSERIKIFTVDQDHK---VEEFIKSIFYSVLII 306
Query: 242 SYEMVLKEKLTLKRFAWEYILIDEAHRIKNEQSALSQVIRLFYSKNRLLITGTPLQNNLH 301
SYEM+L+ +K ++ ++ DE HR+KN + + + R+++TGTP+QN+L
Sbjct: 307 SYEMLLRSLDQIKNIKFDLLICDEGHRLKNSAIKTTTALISLSCEKRIILTGTPIQNDLQ 366
Query: 302 ELWALLNFLLPDVFGDSEVFDEWFQQ--------NGKEEDQEVVVQ---QLHSVLQPFLL 350
E +AL++F+ P + G + + +++ + EE++E+ + +L + F+L
Sbjct: 367 EFFALIDFVNPGILGSLSSYRKIYEEPIILSREPSASEEEKELGERRAAELTCLTGLFIL 426
Query: 351 RRVKSEVEKSLLPKKEINLYVGMTDMQIEWYKSLLEKDIDAVNGAVGKREGKTRLLNIVM 410
RR + + K L PK E ++ +QIE Y+ LL + G E L+ +
Sbjct: 427 RRTQEIINKYLPPKIENVVFCRPGALQIELYRKLLNSQVVRFC-LQGLLENSPHLI-CIG 484
Query: 411 QLRKCCNHPYLFEGA--EPGPPYTTDEH-------------------LVFN---SGKMIV 446
L+K CNHP L + E T D++ L+F SGK+ V
Sbjct: 485 ALKKLCNHPCLLFNSIKEKECSSTCDKNEEKSLYKGLLSVFPADYNPLLFTEKESGKLQV 544
Query: 447 LDKLLKKKKE--QGSRVLIFSQMSRLLDILEDYCYFRGYEYCRIDGSTSHDERVEAIDEY 504
L KLL E +V++ S ++ L+IL++ C GY Y R+DG T +R + +D +
Sbjct: 545 LSKLLAVIHELRPTEKVVLVSNYTQTLNILQEVCKRHGYAYTRLDGQTPISQRQQIVDGF 604
Query: 505 NKPNSEKFIFLLTTRAGGLGINLVTADTVVLYDSDWNPQADLQAMDRAHRIGQKKQVFVY 564
N +S FIFLL+++AGG+G+NL+ ++LYD DWNP D+QAM R R GQK V +Y
Sbjct: 605 NSQHSSFFIFLLSSKAGGVGLNLIGGSHLILYDIDWNPATDIQAMSRVWRDGQKYPVHIY 664
Query: 565 RFVTENAIEEKVIERAAQKLRLDQLVI 591
R +T IEEK+ +R K L V+
Sbjct: 665 RLLTTGTIEEKIYQRQISKQGLCGAVV 691
>At1g03750 [KL] KOG0387 Transcription-coupled repair protein CSB/RAD26
(contains SNF2 family DNA-dependent ATPase domain)
Length = 874
Score = 242 bits (617), Expect = 3e-63
Identities = 163/543 (30%), Positives = 273/543 (50%), Gaps = 90/543 (16%)
Query: 135 KLRDYQVYGLNWLISLHESKLSGILADEMGLGKTLQSISFL----------GYLRYIKGI 184
+L ++Q G+ ++ +L+++ GIL D+MGLGKT+Q+I+FL G ++
Sbjct: 150 RLLEHQREGVKFMYNLYKNNHGGILGDDMGLGKTIQTIAFLAAVYGKDGDAGESCLLESD 209
Query: 185 EGPYIVIVPKSTLDNWQREFAKWTPEVKTVILQGDKDFRKELIETKILTCNFDVLITSYE 244
+GP ++I P S + NW+ EF++W K + G +++I K+ +VL+TS++
Sbjct: 210 KGPVLIICPSSIIHNWESEFSRWASFFKVSVYHGSN---RDMILEKLKARGVEVLVTSFD 266
Query: 245 MVLKEKLTLKRFAWEYILIDEAHRIKNEQSALSQVIRLFYSKNRLLITGTPLQNNLHELW 304
+ L WE ++ DEAHR+KNE+S L + +K R+ +TGT +QN + EL+
Sbjct: 267 TFRIQGPVLSGINWEIVIADEAHRLKNEKSKLYEACLEIKTKKRIGLTGTVMQNKISELF 326
Query: 305 ALLNFLLPDVFGDSEVFDEWFQ------QNGKEEDQEVVV-----QQLHSVLQPFLLRRV 353
L ++ P G E F +++ Q ++ V + Q L S+L+ ++LRR
Sbjct: 327 NLFEWVAPGSLGTREHFRDFYDEPLKLGQRATAPERFVQIADKRKQHLGSLLRKYMLRRT 386
Query: 354 KSEVEKSLLPKKEIN-LYVGMTDMQIEWYKSLLE---------KDIDAVNGAVGKREGKT 403
K E L+ KE N ++ M+ +Q Y+ +++ KD G+ K+
Sbjct: 387 KEETIGHLMMGKEDNVVFCQMSQLQRRVYQRMIQLPEIQCLVNKDNPCACGSPLKQSECC 446
Query: 404 R---------------------------LLNIVMQLRKCCNHPYLFEGAEPGPP------ 430
R +L +M+L++ NH L + P
Sbjct: 447 RRIVPDGTIWSYLHRDNHDGCDSCPFCLVLPCLMKLQQISNHLELIKPNPKDEPEKQKKD 506
Query: 431 -------YTTDEHL---------------VFNSGKMIVLDKLLKKKKEQGSRVLIFSQMS 468
+ TD L V + GKM L+KL+ +G ++L+FS
Sbjct: 507 AEFVSTVFGTDIDLLGGISASKSFMDLSDVKHCGKMRALEKLMASWISKGDKILLFSYSV 566
Query: 469 RLLDILEDYCYFRGYEYCRIDGSTSHDERVEAIDEYNKPNSEKFIFLLTTRAGGLGINLV 528
R+LDILE + +GY + R+DGST + R +D++N S K +FL++T+AGGLG+NLV
Sbjct: 567 RMLDILEKFLIRKGYSFARLDGSTPTNLRQSLVDDFNASPS-KQVFLISTKAGGLGLNLV 625
Query: 529 TADTVVLYDSDWNPQADLQAMDRAHRIGQKKQVFVYRFVTENAIEEKVIERAAQKLRLDQ 588
+A+ VV++D +WNP DLQA DR+ R GQK+ V V+R ++ ++EE V R K +L
Sbjct: 626 SANRVVIFDPNWNPSHDLQAQDRSFRYGQKRHVVVFRLLSAGSLEELVYTRQVYKQQLSN 685
Query: 589 LVI 591
+ +
Sbjct: 686 IAV 688
>CE25717 [R] KOG0391 SNF2 family DNA-dependent ATPase
Length = 1933
Score = 240 bits (612), Expect = 1e-62
Identities = 127/312 (40%), Positives = 188/312 (59%), Gaps = 9/312 (2%)
Query: 130 FIKEGKLRDYQVYGLNWLISLHESKLSGILADEMGLGKTLQSISFLGYLRYIKGIEGPYI 189
F+ G+LR+YQ+ GL+W+++L+E L+GILADEMGLGKT+Q+IS L ++ + I GP++
Sbjct: 591 FLIRGQLREYQMVGLDWMVTLYEKNLNGILADEMGLGKTIQTISLLAHMACSESIWGPHL 650
Query: 190 VIVPKSTLDNWQREFAKWTPEVKTVILQGDKDFRKELIETKILTCNFDVLITSYEMVLKE 249
++VP S + NW+ EF KW P +K + G R E + + F V ITSY+ V ++
Sbjct: 651 IVVPTSVILNWEMEFKKWCPALKILTYFGTAKERAEKRKGWMKPNCFHVCITSYKTVTQD 710
Query: 250 KLTLKRFAWEYILIDEAHRIKNEQSALSQVIRLFYSKNRLLITGTPLQNNLHELWALLNF 309
K+ AW+Y+++DEA IKN +S Q + ++ RLL+TGTPLQN+L ELW+L++F
Sbjct: 711 IRAFKQRAWQYLILDEAQNIKNWKSQRWQALLNVRARRRLLLTGTPLQNSLMELWSLMHF 770
Query: 310 LLPDVFGDSEVFDEWF------QQNGKEEDQEVVVQQLHSVLQPFLLRRVKSEVEKSLLP 363
L+P +F + F +WF G E ++ +LH VL+PF+LRR+K EVEK L
Sbjct: 771 LMPTIFSSHDDFKDWFSNPLTGMMEGNMEFNAPLIGRLHKVLRPFILRRLKKEVEKQLPE 830
Query: 364 KKEINLYVGMTDMQIEWYKSLLEKDIDAVNGAVGKREGKTRLLNIVMQLRKCCNHPYLFE 423
K E + ++ Q Y + + N G +LNIVMQLRKCCNHP LFE
Sbjct: 831 KTEHIVNCSLSKRQRYLYDDFMSRRSTKENLKSG---NMMSVLNIVMQLRKCCNHPNLFE 887
Query: 424 GAEPGPPYTTDE 435
P+ ++
Sbjct: 888 PRPVVAPFVVEK 899
Score = 147 bits (371), Expect = 9e-35
Identities = 69/155 (44%), Positives = 105/155 (67%), Gaps = 1/155 (0%)
Query: 439 FNSGKMIVLDKLLKKKKEQGSRVLIFSQMSRLLDILEDYCYFRGYEYCRIDGSTSHDERV 498
++ GK+ L LL++ R LIF+QMS++LD+L+ + GY+Y R+DG+T ++R
Sbjct: 1236 YDCGKLQTLAVLLRQLYLYKHRCLIFTQMSKMLDVLQTFLSHHGYQYFRLDGTTGVEQRQ 1295
Query: 499 EAIDEYNKPNSEKFIFLLTTRAGGLGINLVTADTVVLYDSDWNPQADLQAMDRAHRIGQK 558
++ +N + + F F+L+TR+GG+G+NL ADTV+ YDSDWNP D QA DR HRIGQ
Sbjct: 1296 AMMERFNA-DPKVFCFILSTRSGGVGVNLTGADTVIFYDSDWNPTMDAQAQDRCHRIGQT 1354
Query: 559 KQVFVYRFVTENAIEEKVIERAAQKLRLDQLVIQQ 593
+ V +YR ++E IEE ++ +A QK RL +L I +
Sbjct: 1355 RNVSIYRLISERTIEENILRKATQKRRLGELAIDE 1389
>Hs17454125 [K] KOG0392 SNF2 family DNA-dependent ATPase domain-containing
protein
Length = 1849
Score = 239 bits (610), Expect = 2e-62
Identities = 173/540 (32%), Positives = 269/540 (49%), Gaps = 69/540 (12%)
Query: 135 KLRDYQVYGLNWLISLHESKLSGILADEMGLGKTLQSISFLG---------YLR--YIKG 183
+LR YQ G+NWL L++ KL GIL D+MGLGKTLQSI L Y R +
Sbjct: 1265 ELRKYQQDGVNWLAFLNKYKLHGILCDDMGLGKTLQSICILAGDHCHRAQEYARSKLAEC 1324
Query: 184 IEGPYIVIVPKSTLDNWQREFAKWTPE--VKTVILQGDKDFRKELIETKILTCNFDVLIT 241
+ P +V+ P + +W E K+ + + G E I + ++++
Sbjct: 1325 MPLPSLVVCPPTLTGHWVDEVGKFCSREYLNPLHYTGPPT---ERIRLQHQVKRHNLIVA 1381
Query: 242 SYEMVLKEKLTLKRFAWEYILIDEAHRIKNEQSALSQVIRLFYSKNRLLITGTPLQNNLH 301
SY++V + + + Y ++DE H IKN ++ LS+ ++ + R++++GTP+QNN+
Sbjct: 1382 SYDVVRNDIDFFRNIKFNYCILDEGHVIKNGKTKLSKAVKQLTANYRIILSGTPIQNNVL 1441
Query: 302 ELWALLNFLLPDVFGDSEVFDEWF----------QQNGKEEDQEVVVQQ-LHSVLQPFLL 350
ELW+L +FL+P G F + + + +E++ V+ LH + PFLL
Sbjct: 1442 ELWSLFDFLMPGFLGTERQFAARYGKPILASRDARSSSREQEAGVLAMDALHRQVLPFLL 1501
Query: 351 RRVKSEVEKSLLPKKEINLYVGMTDMQIEWY----KSLLEKDIDAV--NGAVGKREGKTR 404
RR+K +V + L PK + Y ++ +Q++ Y KS + D+D + + + K +
Sbjct: 1502 RRMKEDVLQDLPPKIIQDYYCTLSPLQVQLYEDFAKSRAKCDVDETVSSATLSEETEKPK 1561
Query: 405 L------LNIVMQLRKCCNHPYLFEGAEPGPPYTTDE---------HLVFNSGKMIVLDK 449
L + LRK CNHP L + TT E H + ++ K+ L +
Sbjct: 1562 LKATGHVFQALQYLRKLCNHPALVLTPQHPEFKTTAEKLAVQNSSLHDIQHAPKLSALKQ 1621
Query: 450 LLK-------KKKEQGS-------RVLIFSQMSRLLDILEDYC---YFRGYEYCRIDGST 492
LL E G+ R+LIF Q+ +LDI+E + Y R+DGS
Sbjct: 1622 LLLDCGLGNGSTSESGTESVVAQHRILIFCQLKSMLDIVEHDLLKPHLPSVTYLRLDGSI 1681
Query: 493 SHDERVEAIDEYNKPNSEKFIFLLTTRAGGLGINLVTADTVVLYDSDWNPQADLQAMDRA 552
+R + +N S + LLTT GGLG+NL ADTVV + DWNP DLQAMDRA
Sbjct: 1682 PPGQRHSIVSRFNNDPSID-VLLLTTHVGGLGLNLTGADTVVFVEHDWNPMRDLQAMDRA 1740
Query: 553 HRIGQKKQVFVYRFVTENAIEEKVIERAAQKLRLDQLVIQQGTGKKTSALTNNKDDLIDM 612
HRIGQK+ V VYR +T +EEK++ K+ + VI Q + +S + D L+D+
Sbjct: 1741 HRIGQKRVVNVYRLITRGTLEEKIMGLQKFKMNIANTVISQ---ENSSLQSMGTDQLLDL 1797
>ECU03g1530 [K] KOG0392 SNF2 family DNA-dependent ATPase domain-containing
protein
Length = 1256
Score = 239 bits (610), Expect = 2e-62
Identities = 161/488 (32%), Positives = 259/488 (52%), Gaps = 38/488 (7%)
Query: 135 KLRDYQVYGLNWLISLHESKLSGILADEMGLGKTLQSISFLGYLRYIKGIEGPYIVIVPK 194
KLRDYQ+ G+ WL L+ L+GILAD+MGLGKTLQ ++FL I +VI P
Sbjct: 796 KLRDYQMEGVKWLNFLYSFSLNGILADDMGLGKTLQVLTFL--CSEIYKTNRKVLVICPS 853
Query: 195 STLDNWQREFAKWTPEVKTVILQGDKDFRKELIETKILTCNFDVLITSYEMVLKEKLTLK 254
S +W+ E K+ P V I +++E +T + +LI+SYE + L
Sbjct: 854 SLTGHWKSEVKKFFPFVAAEI------YKREDRDT------YSILISSYETFRNDYLNFI 901
Query: 255 RFAWEYILIDEAHRIKNEQSALSQVIRLFYSKNRLLITGTPLQNNLHELWALLNFLLPDV 314
W Y+++DE H ++N+Q+ L + + ++++TGTP+ N++ +L +L NFL+P+
Sbjct: 902 EKDWFYVVVDEGHVLRNKQTILYSRMNMIRCSRKMVLTGTPVHNSVEDLISLFNFLMPNY 961
Query: 315 FGDSEVFDEWFQQNGKEEDQEVV-----VQQLHSVLQPFLLRRVKSEVEKSLLPKKEINL 369
G + E+ N K D E+ + LH + PF+LRR+K +V K L PK ++
Sbjct: 962 IGPEK---EYGSLNVKMSDSEIEKTHKRLDLLHRKVLPFILRRLKIDVLKDLPPKIIRDI 1018
Query: 370 YVGMTDMQIEWYKSLLEKDIDAVNGAVGKREGKTRLLNIVMQLRKCCNHPYLFEGAEPGP 429
V + +Q + Y+ + EK G GK N+ + + LF
Sbjct: 1019 TVELGPVQEKLYREIDEKGGKESLGDAELEYGKVDQKNVGFKRTR-----DLFLAVSHIG 1073
Query: 430 PYTTDEHLVFNSGKMIVLDKLLK--KKKEQGSRVLIFSQMSRLLD-ILEDYCYFRGYEYC 486
+ + S K+ L+ ++ ++ GS++LIF Q +D +++D ++Y
Sbjct: 1074 HFKDSTEV---SCKVKALEDIISLCGGEDLGSKILIFFQFKSTIDLVIKDIMKKYKFKYS 1130
Query: 487 RIDGSTSHDERVEAIDEYNKPNSEKFIFLLTTRAGGLGINLVTADTVVLYDSDWNPQADL 546
R+DGS R + +E+N ++ + LTT+ GGLG+NL ADTVV+Y+ DWNP DL
Sbjct: 1131 RLDGSVPSAARTKIAEEFNTGTTQ--MLFLTTQVGGLGLNLTGADTVVMYEHDWNPFNDL 1188
Query: 547 QAMDRAHRIGQKKQVFVYRFVTENAIEEKVIERAAQKLRLDQLVIQQGTGKKTSALTNNK 606
QAMDRAHRIGQK+ V V+RF+ N +EEKV+ + K+ + ++ Q + T +
Sbjct: 1189 QAMDRAHRIGQKRTVNVFRFIARNTLEEKVMNLQSFKMFVANSLVSQ---QNADIETMDT 1245
Query: 607 DDLIDMIQ 614
DL++ Q
Sbjct: 1246 KDLLERFQ 1253
>Hs13376715 [K] KOG0384 Chromodomain-helicase DNA-binding protein
Length = 336
Score = 238 bits (608), Expect = 3e-62
Identities = 137/338 (40%), Positives = 209/338 (61%), Gaps = 30/338 (8%)
Query: 163 MGLGKTLQSISFLGYLRYIKGIEGPYIVIVPKSTLDNWQREFAKWTPEVKTVILQGDKDF 222
MGLGKT+QSI+FL Y + GI GP+++I P ST+ NW+REF WT ++ V+ G
Sbjct: 1 MGLGKTIQSITFL-YEILLTGIRGPFLIIAPLSTIANWEREFRTWT-DINVVVYHGSLIS 58
Query: 223 RKELIETKIL-----------TCNFDVLITSYEMVLKEKLTLKRFAWEYILIDEAHRIKN 271
R+ + + ++ F +IT++EM+L L W ++IDEAHR+KN
Sbjct: 59 RQMIQQYEMYFRDSQGRIIRGAYRFQAIITTFEMILGGCGELNAIEWRCVIIDEAHRLKN 118
Query: 272 EQSALSQVIRLFYSKNRLLITGTPLQNNLHELWALLNFLLPDVFGDSEVFDEWFQQNGKE 331
+ L + ++L ++++L+TGTPLQN + EL++LL+FL P F F Q+ G
Sbjct: 119 KNCKLLEGLKLMNLEHKVLLTGTPLQNTVEELFSLLHFLEPLRFPSESTF---MQEFGDL 175
Query: 332 EDQEVVVQQLHSVLQPFLLRRVKSEVEKSLLPKKEINLYVGMTDMQIEWYKSLLEKDIDA 391
E +E VQ+L ++L+P +LRR+K +VEK L PK+E + V +T++Q ++Y+++LEK+
Sbjct: 176 ETEE-QVQKLQAILKPMMLRRLKEDVEKKLAPKEETIIEVELTNIQKKYYRAILEKNFSF 234
Query: 392 VNGAVGKREGKTRLLNIVMQLRKCCNHPYLFEGAEPG---------PPYTTDEHL---VF 439
++ G + L+N +M+LRKCCNHPYL +GAE P +D HL +
Sbjct: 235 LSKGAG-QTNVPNLVNTMMELRKCCNHPYLIKGAEEKILGEFRDTYNPAASDFHLQAMIQ 293
Query: 440 NSGKMIVLDKLLKKKKEQGSRVLIFSQMSRLLDILEDY 477
++GK++++DKLL K K G +VLIFSQM R LDILEDY
Sbjct: 294 SAGKLVLIDKLLPKMKAGGHKVLIFSQMVRCLDILEDY 331
>ECU09g1890 [L] KOG0388 SNF2 family DNA-dependent ATPase
Length = 883
Score = 238 bits (606), Expect = 5e-62
Identities = 143/395 (36%), Positives = 217/395 (54%), Gaps = 30/395 (7%)
Query: 42 RFKHLLQITDLFRHFIGIRAKYDKNMQKLLKTIDAENKV--AGTLKEPAGHLARAPRHYR 99
+F++LL T+LF HFI KN L +AE K AG G+ A + R
Sbjct: 184 KFEYLLSQTELFSHFI-----LKKNRCGLSSAEEAERKEIGAGEYNGMKGYEAAMLQKER 238
Query: 100 -KXXXXXXXXXXXXXXXXXXXXXXXXXQSPSFIKEGKLRDYQVYGLNWLISLHESKLSGI 158
+ PS +K L++YQ+ GLNWL+SL++ ++GI
Sbjct: 239 LREFGAERSTKKFKEGGEVGETTTRYVPQPSILK-CTLKEYQLRGLNWLVSLYDKGINGI 297
Query: 159 LADEMGLGKTLQSISFLGYLRYIKGIEGPYIVIVPKSTLDNWQREFAKWTPEVKTVILQG 218
LAD+MGLGKT+QSIS L +L + + GP++V+ STLDNW +EFA++ P + G
Sbjct: 298 LADDMGLGKTVQSISLLAHLYETEEVPGPFLVVTISSTLDNWAQEFARFLPSFRVCRFSG 357
Query: 219 DKDFRKELIETKILTCNFDVLITSYEMVLKEKLTLKRFAWEYILIDEAHRIKNEQSALSQ 278
RKEL K N DV+IT+Y+ + ++ LK+ W+Y+++DEA IK+ S +
Sbjct: 358 SPSERKEL---KKRFKNSDVVITTYQTAVSDEKMLKKIKWQYMILDEAQAIKSSMSRRWK 414
Query: 279 VIRLFYSKNRLLITGTPLQNNLHELWALLNFLLPDVFGDSEVFDEWFQQN------GKEE 332
+ F ++NRLL+TGTP+QN++ ELWALL+F++P +F F +WF + K+
Sbjct: 415 TLLSFKARNRLLLTGTPIQNSMQELWALLHFIMPTLFDSLNEFSDWFSKEIETSAIMKKT 474
Query: 333 DQEVVVQQLHSVLQPFLLRRVKSEVEKSLLPKKEINLYVGMTDMQIEWYKSLLEKDIDAV 392
E +Q+LH++L+PF+LRR KS+V L K +I+LY ++ Q YK
Sbjct: 475 VDEKSLQRLHAILKPFMLRRHKSDVIHELGQKTQIDLYCDLSYRQKVLYKE--------- 525
Query: 393 NGAVGKREGKTRLLNIVMQLRKCCNHPYLFEGAEP 427
+ + + N++MQL+K CNHP LF+ EP
Sbjct: 526 ---ITRSCSSMEMENLLMQLKKVCNHPDLFKKLEP 557
Score = 177 bits (448), Expect = 1e-43
Identities = 88/163 (53%), Positives = 117/163 (70%), Gaps = 5/163 (3%)
Query: 429 PPYTTDEHLVFNSGKMIVLDKLLKKKKEQGSRVLIFSQMSRLLDILEDYCYFRGYEYCRI 488
PP T + +SGK++VLD+LL K K +G R+L++ QM+R++D++EDY +GY Y R+
Sbjct: 716 PPLNT---FISDSGKLVVLDELLPKLKAEGHRLLMYFQMTRMIDLIEDYLVRKGYTYLRL 772
Query: 489 DGSTSHDERVEAIDEYNKPNSEKFIFLLTTRAGGLGINLVTADTVVLYDSDWNPQADLQA 548
DGS R E I ++ S+KFIFLL+TRAGGLGINL ADTVV YDSDWNP AD QA
Sbjct: 773 DGSLKASARAEVIRDWQA--SDKFIFLLSTRAGGLGINLTAADTVVFYDSDWNPTADQQA 830
Query: 549 MDRAHRIGQKKQVFVYRFVTENAIEEKVIERAAQKLRLDQLVI 591
MDRAHR+GQ + V VYR +T +EEKV+E A +K + ++VI
Sbjct: 831 MDRAHRLGQTRDVTVYRLITRGTVEEKVLESANRKDEIQKMVI 873
>Hs5730067 [R] KOG0391 SNF2 family DNA-dependent ATPase
Length = 2971
Score = 237 bits (604), Expect = 8e-62
Identities = 131/306 (42%), Positives = 185/306 (59%), Gaps = 9/306 (2%)
Query: 134 GKLRDYQVYGLNWLISLHESKLSGILADEMGLGKTLQSISFLGYLRYIKGIEGPYIVIVP 193
G+LR+YQ GL+WL++++E KL+GILADEMGLGKT+Q+IS L +L KG GP+++IVP
Sbjct: 419 GQLREYQHIGLDWLVTMYEKKLNGILADEMGLGKTIQTISLLAHLACEKGNWGPHLIIVP 478
Query: 194 KSTLDNWQREFAKWTPEVKTVILQGDKDFRKELIETKILTCNFDVLITSYEMVLKEKLTL 253
S + NW+ E +W P K + G + RK + F V ITSY++VL++
Sbjct: 479 TSVMLNWEMELKRWCPSFKILTYYGAQKERKLKRQGWTKPNAFHVCITSYKLVLQDHQAF 538
Query: 254 KRFAWEYILIDEAHRIKNEQSALSQVIRLFYSKNRLLITGTPLQNNLHELWALLNFLLPD 313
+R W Y+++DEA IKN +S Q + F S+ RLL+TGTPLQN+L ELW+L++FL+P
Sbjct: 539 RRKNWRYLILDEAQNIKNFKSQRWQSLLNFNSQRRLLLTGTPLQNSLMELWSLMHFLMPH 598
Query: 314 VFGDSEVFDEWFQQ------NGKEEDQEVVVQQLHSVLQPFLLRRVKSEVEKSLLPKKEI 367
VF F EWF G +E E +V++LH VL+PFLLRRVK +VEK + K E
Sbjct: 599 VFQSHREFKEWFSNPLTGMIEGSQEYNEGLVKRLHKVLRPFLLRRVKVDVEKQMPKKYEH 658
Query: 368 NLYVGMTDMQIEWYKSLLEKDIDAVNGAVGKREGKTRLLNIVMQLRKCCNHPYLFEGAEP 427
+ ++ Q Y + + A G ++NI+MQLRK CNHP LF+
Sbjct: 659 VIRCRLSKRQRCLYDDFMAQTTTKETLATGH---FMSVINILMQLRKVCNHPNLFDPRPV 715
Query: 428 GPPYTT 433
P+ T
Sbjct: 716 TSPFIT 721
Score = 154 bits (390), Expect = 5e-37
Identities = 72/156 (46%), Positives = 108/156 (69%), Gaps = 1/156 (0%)
Query: 439 FNSGKMIVLDKLLKKKKEQGSRVLIFSQMSRLLDILEDYCYFRGYEYCRIDGSTSHDERV 498
++ GK+ L LL++ K +G RVLIF+QM+R+LD+LE + + G+ Y R+DGST ++R
Sbjct: 1781 YDCGKLQTLAVLLRQLKAEGHRVLIFTQMTRMLDVLEQFLTYHGHLYLRLDGSTRVEQRQ 1840
Query: 499 EAIDEYNKPNSEKFIFLLTTRAGGLGINLVTADTVVLYDSDWNPQADLQAMDRAHRIGQK 558
++ +N + F F+L+TR+GG+G+NL ADTVV YDSDWNP D QA DR HRIGQ
Sbjct: 1841 ALMERFNA-DKRIFCFILSTRSGGVGVNLTGADTVVFYDSDWNPTMDAQAQDRCHRIGQT 1899
Query: 559 KQVFVYRFVTENAIEEKVIERAAQKLRLDQLVIQQG 594
+ V +YR ++E +EE ++++A QK L + I+ G
Sbjct: 1900 RDVHIYRLISERTVEENILKKANQKRMLGDMAIEGG 1935
>SPAC15A10.03c [L] KOG0390 DNA repair protein SNF2 family
Length = 852
Score = 236 bits (603), Expect = 1e-61
Identities = 162/508 (31%), Positives = 255/508 (49%), Gaps = 59/508 (11%)
Query: 136 LRDYQVYGLNWLISLHESKLSG-----ILADEMGLGKTLQSISFLGYLRYIKGIEGP--- 187
LR +Q+ G+ +L ++ I+ADEMGLGKTLQ I+ L L G
Sbjct: 264 LRPHQIEGVKFLYKCVTGRIDRCANGCIMADEMGLGKTLQCIALLWTLLKQSPQAGKPTI 323
Query: 188 --YIVIVPKSTLDNWQREFAKWTPE--VKTVILQGDKDFRKELIETKILTCNFD------ 237
I+ P S + NW E KW + + IL G K ++ELI +
Sbjct: 324 EKAIITCPSSLVKNWANELVKWLGKDAITPFILDG-KSSKQELIMALQQWASVHGRQVTR 382
Query: 238 -VLITSYEMVLKEKLTLKRFAWEYILIDEAHRIKNEQSALSQVIRLFYSKNRLLITGTPL 296
VLI SYE + L +L DE HR+KN S + + R++++GTP+
Sbjct: 383 PVLIASYETLRSYVEHLNNAEIGMLLCDEGHRLKNSDSLTFTALDKLNVQRRVILSGTPI 442
Query: 297 QNNLHELWALLNFLLPDVFGDSEVFDEWFQ--------QNGKEEDQE---VVVQQLHSVL 345
QN+L E ++LLNF P + G + F + ++ +G E+D+E + +L ++
Sbjct: 443 QNDLSEYFSLLNFANPGLLGSRQEFRKNYEIPILKGRDADGTEKDKENGDAKLAELAKIV 502
Query: 346 QPFLLRRVKSEVEKSLLPKKEINLYVGMTDMQIEWYKSLLEK-DIDAVNGAVGKREGKTR 404
F++RR + K L K E ++ +++ Q+ YK + +I+ + G +
Sbjct: 503 NRFIIRRTNDILSKYLPVKYEHVVFCNLSEFQLSLYKHFITSPEINKILRGTGSQP---- 558
Query: 405 LLNIVMQLRKCCNHPYLF------EGAEP------------GPPYTTDEHLVFNSGKMIV 446
L + L+K CNHP L EG E G D L SGKM+V
Sbjct: 559 -LKAIGLLKKICNHPDLLNLTEDLEGCEALFPPGFIPRELRGRDRNIDSSL---SGKMLV 614
Query: 447 LDKLLKK-KKEQGSRVLIFSQMSRLLDILEDYCYFRGYEYCRIDGSTSHDERVEAIDEYN 505
L+++L + K+E ++++ S + LD+ E C RGY+ R+DG+ + ++R +D +N
Sbjct: 615 LERMLYQIKQETDDKIVLISNYTSTLDLFEQLCRARGYKALRLDGTMNVNKRQRLVDTFN 674
Query: 506 KPNSEKFIFLLTTRAGGLGINLVTADTVVLYDSDWNPQADLQAMDRAHRIGQKKQVFVYR 565
P + F+FLL+++AGG GINL+ A+ ++L+D DWNP AD QA+ R R GQKK FVYR
Sbjct: 675 DPEKDAFVFLLSSKAGGCGINLIGANRLILFDPDWNPAADQQALARVWRDGQKKDCFVYR 734
Query: 566 FVTENAIEEKVIERAAQKLRLDQLVIQQ 593
F+ IEEK+ +R + K L V+ +
Sbjct: 735 FIATGTIEEKIFQRQSHKQSLSSCVVDE 762
>YGL150c [L] KOG0388 SNF2 family DNA-dependent ATPase
Length = 1489
Score = 236 bits (602), Expect = 1e-61
Identities = 131/324 (40%), Positives = 198/324 (60%), Gaps = 29/324 (8%)
Query: 136 LRDYQVYGLNWLISLHESKLSGILADEMGLGKTLQSISFLGYLRYIKGIEGPYIVIVPKS 195
L++YQ+ GLNWL +L++ ++GILADEMGLGKT+QSIS L +L I GP++V+ P S
Sbjct: 706 LKEYQLKGLNWLANLYDQGINGILADEMGLGKTVQSISVLAHLAENHNIWGPFLVVTPAS 765
Query: 196 TLDNWQREFAKWTPEVKTVILQGDKDFRKELI---ETKILTCN----FDVLITSYEMVLK 248
TL NW E +K+ P+ K + G+ + RK L + K L N F V++TSY+MV+
Sbjct: 766 TLHNWVNEISKFLPQFKILPYWGNANDRKVLRKFWDRKNLRYNKNAPFHVMVTSYQMVVT 825
Query: 249 EKLTLKRFAWEYILIDEAHRIKNEQSALSQVIRLFYSKNRLLITGTPLQNNLHELWALLN 308
+ L++ W+Y+++DEA IK+ QS+ + + F+ +NRLL+TGTP+QN++ ELWALL+
Sbjct: 826 DANYLQKMKWQYMILDEAQAIKSSQSSRWKNLLSFHCRNRLLLTGTPIQNSMQELWALLH 885
Query: 309 FLLPDVFGDSEVFDEWF--------QQNGKEEDQEVVVQQLHSVLQPFLLRRVKSEVEKS 360
F++P +F + F+EWF + N K Q+ +++LH +L+PF+LRRVK V+
Sbjct: 886 FIMPSLFDSHDEFNEWFSKDIESHAEANTKLNQQQ--LRRLHMILKPFMLRRVKKNVQSE 943
Query: 361 LLPKKEINLYVGMTDMQIEWY---KSLLEKDIDAVNGA---------VGKREGKTRLLNI 408
L K EI++ +T Q + Y KS + + DA+ A L+N
Sbjct: 944 LGDKIEIDVLCDLTQRQAKLYQVLKSQISTNYDAIENAATNDSTSNSASNSGSDQNLINA 1003
Query: 409 VMQLRKCCNHPYLFEGAEPGPPYT 432
VMQ RK CNHP LFE A+ P++
Sbjct: 1004 VMQFRKVCNHPDLFERADVDSPFS 1027
Score = 166 bits (421), Expect = 1e-40
Identities = 82/190 (43%), Positives = 129/190 (67%), Gaps = 1/190 (0%)
Query: 435 EHLVFNSGKMIVLDKLLKKKKEQGSRVLIFSQMSRLLDILEDYCYFRGYEYCRIDGSTSH 494
+ + S K+ LD+LL K K +G RVLI+ QM++++D++E+Y +R Y + R+DGS+
Sbjct: 1292 DRFITESAKLRKLDELLVKLKSEGHRVLIYFQMTKMMDLMEEYLTYRQYNHIRLDGSSKL 1351
Query: 495 DERVEAIDEYNKPNSEKFIFLLTTRAGGLGINLVTADTVVLYDSDWNPQADLQAMDRAHR 554
++R + + ++ + N E F+FLL+TRAGGLGINL ADTV+ YDSDWNP D QAMDRAHR
Sbjct: 1352 EDRRDLVHDW-QTNPEIFVFLLSTRAGGLGINLTAADTVIFYDSDWNPTIDSQAMDRAHR 1410
Query: 555 IGQKKQVFVYRFVTENAIEEKVIERAAQKLRLDQLVIQQGTGKKTSALTNNKDDLIDMIQ 614
+GQ +QV VYR + IEE++ +RA QK ++ Q+V++ T +K ++ ++ +
Sbjct: 1411 LGQTRQVTVYRLLVRGTIEERMRDRAKQKEQVQQVVMEGKTQEKNIKTIEVGENDSEVTR 1470
Query: 615 FGARDMLQHG 624
G++ + Q G
Sbjct: 1471 EGSKSISQDG 1480
>YDR334w [R] KOG0391 SNF2 family DNA-dependent ATPase
Length = 1514
Score = 235 bits (600), Expect = 2e-61
Identities = 152/407 (37%), Positives = 220/407 (53%), Gaps = 28/407 (6%)
Query: 128 PSFIKEGKLRDYQVYGLNWLISLHESKLSGILADEMGLGKTLQSISFLGYLRYIKGIEGP 187
PS ++ G LR YQ GLNWL SL+ + +GILADEMGLGKT+Q+IS L YL K GP
Sbjct: 689 PSLLR-GNLRTYQKQGLNWLASLYNNHTNGILADEMGLGKTIQTISLLAYLACEKENWGP 747
Query: 188 YIVIVPKSTLDNWQREFAKWTPEVKTVILQGDKDFRKELIETKILTCNFDVLITSYEMVL 247
++++VP S L NW+ EF ++ P K + G RKE + F V I SY++V+
Sbjct: 748 HLIVVPTSVLLNWEMEFKRFAPGFKVLTYYGSPQQRKEKRKGWNKPDAFHVCIVSYQLVV 807
Query: 248 KEKLTLKRFAWEYILIDEAHRIKNEQSALSQVIRLFYSKNRLLITGTPLQNNLHELWALL 307
+++ + KR W+Y+++DEAH IKN +S Q + F ++ RLL+TGTPLQNNL ELW+LL
Sbjct: 808 QDQHSFKRKRWQYMVLDEAHNIKNFRSTRWQALLNFNTQRRLLLTGTPLQNNLAELWSLL 867
Query: 308 NFLLPDV---------FGDSEVFDEWF-----------QQNGKEEDQEVVVQQLHSVLQP 347
FL+P F D + F +WF Q G++++ + V +LH VL+P
Sbjct: 868 YFLMPQTVIDGKKVSGFADLDAFQQWFGRPVDKIIETGQNFGQDKETKKTVAKLHQVLRP 927
Query: 348 FLLRRVKSEVEKSLLPKKEINLYVGMTDMQIEWYKSLLEKDIDAVNGAVGKREGKTRLLN 407
+LLRR+K++VEK + K E +Y ++ Q Y + + A G ++N
Sbjct: 928 YLLRRLKADVEKQMPAKYEHIVYCKLSKRQRFLYDDFMSRAQTKATLASG---NFMSIVN 984
Query: 408 IVMQLRKCCNHPYLFEGAEPGPPYTTDEHLVFNSGKMI--VLDKLLKKKKEQGSRVLIFS 465
+MQLRK CNHP LFE P EH V + K + L KL KK + L F
Sbjct: 985 CLMQLRKVCNHPNLFE-VRPILTSFVLEHCVASDYKDVERTLLKLFKKNNQVNRVDLDFL 1043
Query: 466 QMSRLLDILEDYCYFRGYEYCRIDGSTSHDERVEAIDEYNKPNSEKF 512
+ L+ +D + E ++ + E V + E NK E+F
Sbjct: 1044 NLVFTLND-KDLTSYHAEEISKLTCVKNFVEEVNKLRETNKQLQEEF 1089
Score = 157 bits (397), Expect = 8e-38
Identities = 75/158 (47%), Positives = 112/158 (70%), Gaps = 1/158 (0%)
Query: 437 LVFNSGKMIVLDKLLKKKKEQGSRVLIFSQMSRLLDILEDYCYFRGYEYCRIDGSTSHDE 496
L ++ GK+ L LL++ K+ G R LIF+QM+++LD+LE + + GY Y R+DG+T ++
Sbjct: 1241 LQYDCGKLQKLAILLQQLKDNGHRALIFTQMTKVLDVLEQFLNYHGYLYMRLDGATKIED 1300
Query: 497 RVEAIDEYNKPNSEKFIFLLTTRAGGLGINLVTADTVVLYDSDWNPQADLQAMDRAHRIG 556
R + +N +S +F+L++R+GGLGINL ADTV+ YDSDWNP D Q DR HRIG
Sbjct: 1301 RQILTERFNT-DSRITVFILSSRSGGLGINLTGADTVIFYDSDWNPAMDKQCQDRCHRIG 1359
Query: 557 QKKQVFVYRFVTENAIEEKVIERAAQKLRLDQLVIQQG 594
Q + V +YRFV+E+ IE ++++A QK +LD +VIQ+G
Sbjct: 1360 QTRDVHIYRFVSEHTIESNILKKANQKRQLDNVVIQEG 1397
>At3g19210 [L] KOG0390 DNA repair protein SNF2 family
Length = 688
Score = 233 bits (595), Expect = 9e-61
Identities = 163/523 (31%), Positives = 262/523 (49%), Gaps = 69/523 (13%)
Query: 136 LRDYQVYGLNWLIS----LHES-KLSG-ILADEMGLGKTLQSISFLGYLRYIKGIEGP-- 187
LR +Q G+ ++ LH S ++G ILAD+MGLGKTLQSI+ L Y +G +G
Sbjct: 76 LRPHQREGVQFMFDCVSGLHGSANINGCILADDMGLGKTLQSITLL-YTLLCQGFDGTPM 134
Query: 188 ---YIVIVPKSTLDNWQREFAKWTPE----------VKTVILQGDKDFRKELIETKILTC 234
I++ P S + NW+ E KW + + +L G F +
Sbjct: 135 VKKAIIVTPTSLVSNWEAEIKKWVGDRIQLIALCESTRDDVLSGIDSFTRP-------RS 187
Query: 235 NFDVLITSYEMV-LKEKLTLKRFAWEYILIDEAHRIKNEQSALSQVIRLFYSKNRLLITG 293
VLI SYE + + + + ++ DEAHR+KN+Q+ ++ + K R+L++G
Sbjct: 188 ALQVLIISYETFRMHSSKFCQSESCDLLICDEAHRLKNDQTLTNRALASLTCKRRVLLSG 247
Query: 294 TPLQNNLHELWALLNFLLPDVFGDSEVFDEWFQQ--------NGKEEDQEVVVQ---QLH 342
TP+QN+L E +A++NF P GD+ F +++ EE++ + +L
Sbjct: 248 TPMQNDLEEFFAMVNFTNPGSLGDAAHFRHYYEAPIICGREPTATEEEKNLAADRSAELS 307
Query: 343 SVLQPFLLRRVKSEVEKSLLPKKEINLYVGMTDMQIEWYKSLLEKDIDAVNGAVGKREGK 402
S + F+LRR + + L PK + MT +Q Y + + A+ +
Sbjct: 308 SKVNQFILRRTNALLSNHLPPKIIEVVCCKMTTLQSTLYNHFISSK--NLKRALADNAKQ 365
Query: 403 TRLLNIVMQLRKCCNHPYL-FEGAEPGPPYTT------------------------DEHL 437
T++L + L+K CNHP L ++ + G P T D
Sbjct: 366 TKVLAYITALKKLCNHPKLIYDTIKSGNPGTVGFENCLEFFPAEMFSGRSGAWTGGDGAW 425
Query: 438 VFNSGKMIVLDKLLKK-KKEQGSRVLIFSQMSRLLDILEDYCYFRGYEYCRIDGSTSHDE 496
V SGKM VL +LL +++ R+++ S ++ LD+ C R Y + R+DGST+ +
Sbjct: 426 VELSGKMHVLSRLLANLRRKTDDRIVLVSNYTQTLDLFAQLCRERRYPFLRLDGSTTISK 485
Query: 497 RVEAIDEYNKPNSEKFIFLLTTRAGGLGINLVTADTVVLYDSDWNPQADLQAMDRAHRIG 556
R + ++ N P ++F FLL+++AGG G+NL+ A+ +VL+D DWNP D QA R R G
Sbjct: 486 RQKLVNRLNDPTKDEFAFLLSSKAGGCGLNLIGANRLVLFDPDWNPANDKQAAARVWRDG 545
Query: 557 QKKQVFVYRFVTENAIEEKVIERAAQKLRLDQLVIQQGTGKKT 599
QKK+V+VYRF++ IEEKV +R K L +++ + T T
Sbjct: 546 QKKRVYVYRFLSTGTIEEKVYQRQMSKEGLQKVIQHEQTDNST 588
>7295868 [L] KOG0390 DNA repair protein SNF2 family
Length = 784
Score = 231 bits (589), Expect = 5e-60
Identities = 160/520 (30%), Positives = 263/520 (49%), Gaps = 41/520 (7%)
Query: 136 LRDYQVYGLNWLISLHESKLSG----ILADEMGLGKTLQSISFLGYLRY----IKGIEGP 187
LR +Q G+ ++ E K I+ADEMGLGKTLQ ++ + L K
Sbjct: 156 LRPHQREGVRFMYECVEGKRGNFNGCIMADEMGLGKTLQCVTLVWTLLRQGPECKPTINK 215
Query: 188 YIVIVPKSTLDNWQREFAKWTPEVKTVILQ--GDKDFRKELIETKILTC---NFDVLITS 242
IV+ P S + NW++EF KW + G K+ +E +T VL+ S
Sbjct: 216 AIVVSPSSLVKNWEKEFTKWLHGRLLCLPMEGGTKENTIRALEQFSMTSARLGTPVLLIS 275
Query: 243 YEMVLKEKLTLKRFAWEYILIDEAHRIKNEQSALSQVIRLFYSKNRLLITGTPLQNNLHE 302
YE L ++ ++ DE HR+KN + Q + +K R+L++GTP+QN+L E
Sbjct: 276 YETFRIYAEILCKYEVGMVICDEGHRLKNSDNLTYQALMGLKTKRRVLLSGTPIQNDLTE 335
Query: 303 LWALLNFLLPDVFGDSEVFDEWFQ------QNGKEEDQE-----VVVQQLHSVLQPFLLR 351
++L+NF+ P++ G + VF F+ QN +QE Q+L ++ ++R
Sbjct: 336 YYSLVNFVNPEMLGTAAVFKRNFESAILRGQNTDSTEQERQRAIEKTQELIGLVDQCIIR 395
Query: 352 RVKSEVEKSLLPKKEINLYVGMTDMQIEWYKSLLEKDIDAVNGAVGKREGKTRLLNIVMQ 411
R + K L K E+ + +T +Q+E Y + L+ D + A + L +
Sbjct: 396 RTNQILTKYLPVKFEMVICAKLTAIQLELYTNFLKSDQVRRSLADCNEKASLTALADITT 455
Query: 412 LRKCCNHPYL-----------FEGAEPGPP--YTTDEHLVFNSGKMIVLDKLLKKKKEQG 458
L+K C+HP L FE ++ P Y + SGK ++LD +L + +G
Sbjct: 456 LKKICSHPDLIYEKLTAREKGFENSQNVLPSNYKPKDLNPELSGKFMLLDFMLAAIRAEG 515
Query: 459 S-RVLIFSQMSRLLDILEDYCYFRGYEYCRIDGSTSHDERVEAIDEYNKPNSEKFIFLLT 517
+ +V++ S ++ LD+ E R Y + R+DG+ S +R + +D +N P S+ F+F+L+
Sbjct: 516 NDKVVLISNYTQTLDLFEQLARKRKYGFVRLDGTMSIKKRSKVVDRFNDPESDSFLFMLS 575
Query: 518 TRAGGLGINLVTADTVVLYDSDWNPQADLQAMDRAHRIGQKKQVFVYRFVTENAIEEKVI 577
++AGG G+NL+ A+ + ++D DWNP D QAM R R GQKK ++YR V +IEEK++
Sbjct: 576 SKAGGCGLNLIGANRLFMFDPDWNPANDEQAMARVWRDGQKKPCYIYRLVASGSIEEKIL 635
Query: 578 ERAAQKLRLDQLVIQQGTGKKTSALTNNKDDLIDMIQFGA 617
+R K L +I +++ +DDL D+ F A
Sbjct: 636 QRQTHKKSLSSTIID---NNESAEKHFTRDDLKDLFTFDA 672
>At3g57300 [L] KOG0388 SNF2 family DNA-dependent ATPase
Length = 1496
Score = 230 bits (587), Expect = 8e-60
Identities = 123/317 (38%), Positives = 199/317 (61%), Gaps = 17/317 (5%)
Query: 126 QSPSFIKEGKLRDYQVYGLNWLISLHESKLSGILADEMGLGKTLQSISFLGYLRYIKGIE 185
Q+P K G L++YQ+ GL WL++ +E L+GILADEMGLGKT+Q+++FL +L K I
Sbjct: 577 QTPELFK-GTLKEYQMKGLQWLVNCYEQGLNGILADEMGLGKTIQAMAFLAHLAEEKNIW 635
Query: 186 GPYIVIVPKSTLDNWQREFAKWTPEVKTVILQG---DKDFRKELIETKIL---TCNFDVL 239
GP++V+ P S L+NW E +++ P++KT+ G ++ ++ I K + F +L
Sbjct: 636 GPFLVVAPASVLNNWADEISRFCPDLKTLPYWGGLQERTILRKNINPKRMYRRDAGFHIL 695
Query: 240 ITSYEMVLKEKLTLKRFAWEYILIDEAHRIKNEQSALSQVIRLFYSKNRLLITGTPLQNN 299
ITSY++++ ++ +R W+Y+++DEA IK+ S + + F +NRLL+TGTP+QNN
Sbjct: 696 ITSYQLLVTDEKYFRRVKWQYMVLDEAQAIKSSSSIRWKTLLSFNCRNRLLLTGTPIQNN 755
Query: 300 LHELWALLNFLLPDVFGDSEVFDEWFQ---QNGKEED---QEVVVQQLHSVLQPFLLRRV 353
+ ELWALL+F++P +F + + F+EWF +N E E + +LH++L+PF+LRRV
Sbjct: 756 MAELWALLHFIMPMLFDNHDQFNEWFSKGIENHAEHGGTLNEHQLNRLHAILKPFMLRRV 815
Query: 354 KSEVEKSLLPKKEINLYVGMTDMQIEWYKSLLEK----DIDAVNGAVGKREGKTRLLNIV 409
K +V L K E+ ++ ++ Q +Y+++ K ++ N + L+NIV
Sbjct: 816 KKDVVSELTTKTEVTVHCKLSSRQQAFYQAIKNKISLAELFDSNRGQFTDKKVLNLMNIV 875
Query: 410 MQLRKCCNHPYLFEGAE 426
+QLRK CNHP LFE E
Sbjct: 876 IQLRKVCNHPELFERNE 892
Score = 154 bits (389), Expect = 7e-37
Identities = 101/295 (34%), Positives = 158/295 (53%), Gaps = 40/295 (13%)
Query: 437 LVFNSGKMIVLDKLLKKKKEQGSRVLIFSQMSRLLDILEDYCYFRGYEYCRIDGSTSHDE 496
L+ +SGK+ LD LLK+ + RVL+F+QM+++L+ILEDY +R Y+Y R+DGS++ +
Sbjct: 1201 LLTDSGKLQTLDILLKRLRAGNHRVLLFAQMTKMLNILEDYMNYRKYKYLRLDGSSTIMD 1260
Query: 497 RVEAIDEYNKPNSEKFIFLLTTRAGGLGINLVTADTVVLYDSDWNPQADLQAMDRAHRIG 556
R + + ++ S+ F+FLL+TRAGGLGINL ADTV+ Y+SDWNP DLQAMDRAHR+G
Sbjct: 1261 RRDMVRDFQH-RSDIFVFLLSTRAGGLGINLTAADTVIFYESDWNPTLDLQAMDRAHRLG 1319
Query: 557 QKKQVFVYRFVTENAIEEKVIERAAQKLRLDQLVIQQGTGKKTSALTNNKDDLIDMIQFG 616
Q K + +EEK++ RA+QK + QLV+ G + DD + G
Sbjct: 1320 QTK---------DETVEEKILHRASQKNTVQQLVMTGGHVQ--------GDDFL-----G 1357
Query: 617 ARDMLQHGSGNITVDEDIDEILKKGERKTLELNAKYESLGLDDLQKFNGMADQSAYEWNG 676
A D++ L + + +L K+ L L D QK + E +
Sbjct: 1358 AADVVS---------------LLMDDAEAAQLEQKFRELPLQDRQKKKTKRIRIDAEGDA 1402
Query: 677 TNFEKKKPD--DHTVDWINPPKRERRREQPLYSVDDYYREVIGNGKSKPSGSNTP 729
T E + D D+ + + P++ + + + + K + +G +TP
Sbjct: 1403 TLEELEDVDRQDNGQEPLEEPEKPKSSNKKRRAASNPKARAPQKAKEEANGEDTP 1457
>CE25143 [L] KOG0390 DNA repair protein SNF2 family
Length = 818
Score = 225 bits (573), Expect = 3e-58
Identities = 156/475 (32%), Positives = 239/475 (49%), Gaps = 41/475 (8%)
Query: 158 ILADEMGLGKTLQSISFLGYLRYIKGIEGPY----IVIVPKSTLDNWQREFAKWTPEVKT 213
I+ADEMGLGKTLQ IS L L P I++ P S + NW +E KW +
Sbjct: 229 IMADEMGLGKTLQCISLLWTLLRQSPDACPTVSKSIIVCPSSLVKNWDKEIKKWLG-TRL 287
Query: 214 VILQGDKDFRKELIET-------KILTCNFDVLITSYEMVLKEKLTLKRFAWEYILIDEA 266
+ D R+++I + C VLI SYE L ++ DE
Sbjct: 288 NAMPVDSGKREQIIACLNSFMADSKMRCAIPVLIISYETFRLYANILHSGDVGIVICDEG 347
Query: 267 HRIKNEQSALSQVIRLFYSKNRLLITGTPLQNNLHELWALLNFLLPDVFGDSEVFDEWFQ 326
HR+KN ++ Q + R+LI+GTP+QN+L E ++L+NF+ P + G + F + F+
Sbjct: 348 HRLKNSENLTYQALSGLKCARRVLISGTPIQNDLLEYFSLVNFVNPGLLGTASEFRKKFE 407
Query: 327 Q--------NGKEEDQ---EVVVQQLHSVLQPFLLRRVKSEVEKSLLPKKEINLYVGMTD 375
+ EDQ E +++ S+++ ++RR + + K L K E + +
Sbjct: 408 NAILKGRDADASSEDQKKGEEKTKEMISLVEKCIIRRTSALLTKYLPVKYEHIICCKNST 467
Query: 376 MQIEWYKSLLEKDIDAVNGAVGKREGKTR-LLNIVMQLRKCCNHPYLF--EGAEPGPPYT 432
+Q Y L+E + N V K +G T L+ + L+K CNHPYL E +P +
Sbjct: 468 LQETLYNKLIE--CEKQNRIVEKDKGATASALSFITHLKKLCNHPYLVYDEFQKPDNRFR 525
Query: 433 TDEHLVFN------------SGKMIVLDKLLK-KKKEQGSRVLIFSQMSRLLDILEDYCY 479
+F SGKM VLD +L +K + ++ S ++ +D + C
Sbjct: 526 NKCLSIFPESFNPKSFDPSFSGKMKVLDYILAVTRKTTDDKFVLVSNYTQTIDQFMELCK 585
Query: 480 FRGYEYCRIDGSTSHDERVEAIDEYNKPNSEKFIFLLTTRAGGLGINLVTADTVVLYDSD 539
RGY++ R+DGS S +R + +D +N P S F FLL+++AGG G+NL+ A+ +V++D D
Sbjct: 586 LRGYDFVRLDGSMSIKQRSKIVDTFNDPASTIFCFLLSSKAGGCGLNLIGANRLVMFDPD 645
Query: 540 WNPQADLQAMDRAHRIGQKKQVFVYRFVTENAIEEKVIERAAQKLRLDQLVIQQG 594
WNP D QAM R R GQKK F+YR + +IEEK+ +R K L V+ G
Sbjct: 646 WNPANDDQAMARVWRDGQKKMCFIYRLLATGSIEEKMFQRQTHKKALSSCVVDAG 700
>YGL163c [L] KOG0390 DNA repair protein SNF2 family
Length = 898
Score = 224 bits (571), Expect = 6e-58
Identities = 152/479 (31%), Positives = 245/479 (50%), Gaps = 50/479 (10%)
Query: 158 ILADEMGLGKTLQSISFLGYLRYIKGIEG-----PYIVIVPKSTLDNWQREFAKW----- 207
I+ADEMGLGKTLQ I+ + L +G +G I++ P S ++NW E KW
Sbjct: 332 IMADEMGLGKTLQCIALMWTL-LRQGPQGKRLIDKCIIVCPSSLVNNWANELIKWLGPNT 390
Query: 208 -TP---EVKTVILQGDKDFRKELI----ETKILTCNFDVLITSYEMVLKEKLTLKRFAWE 259
TP + K + G + I + + VLI SYE + + LK
Sbjct: 391 LTPLAVDGKKSSMGGGNTTVSQAIHAWAQAQGRNIVKPVLIISYETLRRNVDQLKNCNVG 450
Query: 260 YILIDEAHRIKNEQSALSQVIRLFYSKNRLLITGTPLQNNLHELWALLNFLLPDVFGDSE 319
+L DE HR+KN S + R++++GTP+QN+L E +ALL+F P + G
Sbjct: 451 LMLADEGHRLKNGDSLTFTALDSISCPRRVILSGTPIQNDLSEYFALLSFSNPGLLGSRA 510
Query: 320 VFDEWFQQ---NGKEEDQ--------EVVVQQLHSVLQPFLLRRVKSEVEKSLLPKKEIN 368
F + F+ G++ D E +Q+L +++ F++RR + K L K E
Sbjct: 511 EFRKNFENPILRGRDADATDKEITKGEAQLQKLSTIVSKFIIRRTNDILAKYLPCKYEHV 570
Query: 369 LYVGMTDMQIEWYKSLLE-KDIDAVNGAVGKREGKTRLLNIVMQLRKCCNHPYLFEGAEP 427
++V + +Q E Y L++ +++ V V G ++ L + L+K CNHP L +
Sbjct: 571 IFVNLKPLQNELYNKLIKSREVKKVVKGV----GGSQPLRAIGILKKLCNHPNLLNFEDE 626
Query: 428 --------------GPPYTTDEHLVFNSGKMIVLDKLLKK-KKEQGSRVLIFSQMSRLLD 472
P + S K +L++ L K K E ++++ S ++ LD
Sbjct: 627 FDDEDDLELPDDYNMPGSKARDVQTKYSAKFSILERFLHKIKTESDDKIVLISNYTQTLD 686
Query: 473 ILEDYCYFRGYEYCRIDGSTSHDERVEAIDEYNKPNSEKFIFLLTTRAGGLGINLVTADT 532
++E C ++ Y R+DG+ S ++R + +D +N P ++FIFLL+++AGG GINL+ A+
Sbjct: 687 LIEKMCRYKHYSAVRLDGTMSINKRQKLVDRFNDPEGQEFIFLLSSKAGGCGINLIGANR 746
Query: 533 VVLYDSDWNPQADLQAMDRAHRIGQKKQVFVYRFVTENAIEEKVIERAAQKLRLDQLVI 591
++L D DWNP AD QA+ R R GQKK F+YRF++ IEEK+ +R + K+ L V+
Sbjct: 747 LILMDPDWNPAADQQALARVWRDGQKKDCFIYRFISTGTIEEKIFQRQSMKMSLSSCVV 805
>YBR073w [L] KOG0390 DNA repair protein SNF2 family
Length = 958
Score = 224 bits (571), Expect = 6e-58
Identities = 161/524 (30%), Positives = 264/524 (49%), Gaps = 75/524 (14%)
Query: 147 LISLHESKLSG-ILADEMGLGKTLQSISFLGYLRY----------------IKGIEGPYI 189
L+ ++S +SG +LAD+MGLGKTL SI+ + L + G+ +
Sbjct: 331 LVLENDSDISGCLLADDMGLGKTLMSITLIWTLIRQTPFASKVSCSQSGIPLTGLCKKIL 390
Query: 190 VIVPKSTLDNWQREFAKWTP----EVKTVILQGDKDFRKELIETKI-LTCNFDVLITSYE 244
V+ P + + NW+REF KW V T+ + D K + + + + VLI YE
Sbjct: 391 VVCPVTLIGNWKREFGKWLNLSRIGVLTLSSRNSPDMDKMAVRNFLKVQRTYQVLIIGYE 450
Query: 245 MVLK--EKLTLKRFAWEYILIDEAHRIKNEQSALSQVIRLFYSKNRLLITGTPLQNNLHE 302
+L E+L + + ++ DE HR+KN S + ++ + +LL+TGTP+QN+L+E
Sbjct: 451 KLLSVSEELEKNKHLIDMLVCDEGHRLKNGASKILNTLKSLDIRRKLLLTGTPIQNDLNE 510
Query: 303 LWALLNFLLPDVFGDSEVF------------------DEWFQQNGKEEDQEVVVQQLHSV 344
+ +++F+ P + G F +E + G+E +E++ +
Sbjct: 511 FFTIIDFINPGILGSFASFKRRFIIPITRARDTANRYNEELLEKGEERSKEMI-----EI 565
Query: 345 LQPFLLRRVKSEVEKSLLPKKEINLYVGMTDMQIEWYKSLLEKDIDAVNGAVGKREGKTR 404
+ F+LRR + +EK L PK +I L+ QI +K +L+ G R +
Sbjct: 566 TKRFILRRTNAILEKYLPPKTDIILFCKPYSQQILAFKDILQ----------GARLDFGQ 615
Query: 405 L-----LNIVMQLRKCCNHPYLFEGAEP------GPPYTTDEHL-VFNSGKMIVLDKLLK 452
L L ++ L+K CN P L G++P + D + NSGK+ VL LL+
Sbjct: 616 LTFSSSLGLITLLKKVCNSPGLV-GSDPYYKSHIKDTQSQDSYSRSLNSGKLKVLMTLLE 674
Query: 453 K-KKEQGSRVLIFSQMSRLLDILEDYCYFRGYEYCRIDGSTSHDERVEAIDEYNKPNSEK 511
+K +V++ S ++ LDI+E+ G +CR+DGS +R + +N+ N
Sbjct: 675 GIRKGTKEKVVVVSNYTQTLDIIENLMNMAGMSHCRLDGSIPAKQRDSIVTSFNR-NPAI 733
Query: 512 FIFLLTTRAGGLGINLVTADTVVLYDSDWNPQADLQAMDRAHRIGQKKQVFVYRFVTENA 571
F FLL+ ++GG+G+NLV ++L+D+DWNP DLQAM R HR GQKK F+YR VT
Sbjct: 734 FGFLLSAKSGGVGLNLVGRSRLILFDNDWNPSVDLQAMSRIHRDGQKKPCFIYRLVTTGC 793
Query: 572 IEEKVIERAAQKLRLDQLVIQQGTGKKTSALTN---NKDDLIDM 612
I+EK+++R K L Q + + + + NK+DL D+
Sbjct: 794 IDEKILQRQLMKNSLSQKFLGDSEMRNKESSNDDLFNKEDLKDL 837
>Hs14767157 [K] KOG0385 Chromatin remodeling complex WSTF-ISWI small subunit
Length = 348
Score = 224 bits (571), Expect = 6e-58
Identities = 126/305 (41%), Positives = 189/305 (61%), Gaps = 22/305 (7%)
Query: 351 RRVKSEVEKSLLPK--KEINLYVGMTDMQIEWYKSLLEKDIDAVNGAVGKREGKTRLLNI 408
RR + + S + E+ + +++ ++++E +I + E +L NI
Sbjct: 20 RRTRKSINYSKIDDFPNELEKLISQIQPEVDRERAVVEVNIPV------ESEVNLKLQNI 73
Query: 409 VMQLRKCCNHPYLFEGAEPGPPYTT----DEHLVFNSGKMIVLDKLLKKKKEQGSRVLIF 464
+M LRKCCNHPYL E P P T DE LV NSGK ++LD++L + K++G +VL+F
Sbjct: 74 MMLLRKCCNHPYLIE--YPIDPVTQEFKIDEELVTNSGKFLILDRMLPELKKRGHKVLLF 131
Query: 465 SQMSRLLDILEDYCYFRGYEYCRIDGSTSHDERVEAIDEYNKPNSEKFIFLLTTRAGGLG 524
SQM+ +LDIL DYC+ R + + R+DGS S+ ER + + +N + E FIFL++TRAGGLG
Sbjct: 132 SQMTSMLDILMDYCHLRDFNFSRLDGSMSYSEREKNMHSFNT-DPEVFIFLVSTRAGGLG 190
Query: 525 INLVTADTVVLYDSDWNPQADLQAMDRAHRIGQKKQVFVYRFVTENAIEEKVIERAAQKL 584
INL ADTV++YDSDWNPQ+DLQA DR HRIGQ K V VYR VT N I++K++ERAA K
Sbjct: 191 INLTAADTVIIYDSDWNPQSDLQAQDRCHRIGQTKPVVVYRLVTANTIDQKIVERAAAKR 250
Query: 585 RLDQLVIQQGTGKKTSALTNNKDDLID----MIQFGARDMLQHGSGN---ITVDEDIDEI 637
+L++L+I + K + N + +D M +RD + G+ + D+D++ +
Sbjct: 251 KLEKLIIHKNHFKGGQSGLNLSKNFLDPKELMELLKSRDYEREIKGSREKVISDKDLELL 310
Query: 638 LKKGE 642
L + +
Sbjct: 311 LDRSD 315
>Hs4506397 [L] KOG0390 DNA repair protein SNF2 family
Length = 747
Score = 222 bits (566), Expect = 2e-57
Identities = 151/474 (31%), Positives = 246/474 (51%), Gaps = 43/474 (9%)
Query: 158 ILADEMGLGKTLQSISFLGYLRYIKGIEGPYI----VIVPKSTLDNWQREFAKWTP-EVK 212
I+ADEMGLGKTLQ I+ + L P I V+ P S + NW E KW ++
Sbjct: 180 IMADEMGLGKTLQCITLMWTLLRQSPECKPEIDKAVVVSPSSLVKNWYNEVGKWLGGRIQ 239
Query: 213 TVILQGDKDFRKELIETKI--------LTCNFDVLITSYEMVLKEKLTLKRFAWEYILID 264
+ + G K+ I+ K+ + +LI SYE L++ + ++ D
Sbjct: 240 PLAIDGGS---KDEIDQKLEGFMNQRGARVSSPILIISYETFRLHVGVLQKGSVGLVICD 296
Query: 265 EAHRIKNEQSALSQVIRLFYSKNRLLITGTPLQNNLHELWALLNFLLPDVFGDSEVFDEW 324
E HR+KN ++ Q + + R+LI+GTP+QN+L E ++L++F+ + G + F +
Sbjct: 297 EGHRLKNSENQTYQALDSLNTSRRVLISGTPIQNDLLEYFSLVHFVNSGILGTAHEFKKH 356
Query: 325 FQ--------QNGKEEDQEVV---VQQLHSVLQPFLLRRVKSEVEKSLLPKKEINLYVGM 373
F+ E D+++ +++L S++ L+RR + K L K E + +
Sbjct: 357 FELPILKGRDAAASEADRQLGEERLRELTSIVNRCLIRRTSDILSKYLPVKIEQVVCCRL 416
Query: 374 TDMQIEWYKSLLEKDIDAVNGAVGKREGKTRLLNIVMQLRKCCNHPYL-----------F 422
T +Q E YK L + A GK + L+ + L+K CNHP L F
Sbjct: 417 TPLQTELYKRFLRQAKPAEELLEGKMSVSS--LSSITSLKKLCNHPALIYDKCVEEEDGF 474
Query: 423 EGAEP--GPPYTTDEHLVFNSGKMIVLDKLLKKKKEQGS-RVLIFSQMSRLLDILEDYCY 479
GA P Y++ SGKM+VLD +L + + S +V++ S ++ LD+ E C
Sbjct: 475 VGALDLFPPGYSSKALEPQLSGKMLVLDYILAVTRSRSSDKVVLVSNYTQTLDLFEKLCR 534
Query: 480 FRGYEYCRIDGSTSHDERVEAIDEYNKPNSEKFIFLLTTRAGGLGINLVTADTVVLYDSD 539
R Y Y R+DG+ S +R + ++ +N P+S F+F+L+++AGG G+NL+ A+ +V++D D
Sbjct: 535 ARRYLYVRLDGTMSIKKRAKVVERFNSPSSPDFVFMLSSKAGGCGLNLIGANRLVMFDPD 594
Query: 540 WNPQADLQAMDRAHRIGQKKQVFVYRFVTENAIEEKVIERAAQKLRLDQLVIQQ 593
WNP D QAM R R GQKK ++YR ++ IEEK+ +R + K L V+ +
Sbjct: 595 WNPANDEQAMARVWRDGQKKTCYIYRLLSAGTIEEKIFQRQSHKKALSSCVVDE 648
>HsM8922362 [K] KOG0385 Chromatin remodeling complex WSTF-ISWI small subunit
Length = 310
Score = 217 bits (553), Expect = 7e-56
Identities = 116/245 (47%), Positives = 164/245 (66%), Gaps = 14/245 (5%)
Query: 409 VMQLRKCCNHPYLFEGAEPGPPYTT----DEHLVFNSGKMIVLDKLLKKKKEQGSRVLIF 464
+M LRKCCNHPYL E P P T DE LV NSGK ++LD++L + K++G +VL+F
Sbjct: 1 MMLLRKCCNHPYLIE--YPIDPVTQEFKIDEELVTNSGKFLILDRMLPELKKRGHKVLLF 58
Query: 465 SQMSRLLDILEDYCYFRGYEYCRIDGSTSHDERVEAIDEYNKPNSEKFIFLLTTRAGGLG 524
SQM+ +LDIL DYC+ R + + R+DGS S+ ER + + +N + E FIFL++TRAGGLG
Sbjct: 59 SQMTSMLDILMDYCHLRDFNFSRLDGSMSYSEREKNMHSFNT-DPEVFIFLVSTRAGGLG 117
Query: 525 INLVTADTVVLYDSDWNPQADLQAMDRAHRIGQKKQVFVYRFVTENAIEEKVIERAAQKL 584
INL ADTV++YDSDWNPQ+DLQA DR HRIGQ K V VYR VT N I++K++ERAA K
Sbjct: 118 INLTAADTVIIYDSDWNPQSDLQAQDRCHRIGQTKPVVVYRLVTANTIDQKIVERAAAKR 177
Query: 585 RLDQLVIQQGTGKKTSALTNNKDDLID----MIQFGARDMLQHGSGN---ITVDEDIDEI 637
+L++L+I + K + N + +D M +RD + G+ + D+D++ +
Sbjct: 178 KLEKLIIHKNHFKGGQSGLNLSKNFLDPKELMELLKSRDYEREIKGSREKVISDKDLELL 237
Query: 638 LKKGE 642
L + +
Sbjct: 238 LDRSD 242
>At4g31900 [R] KOG0383 Predicted helicase
Length = 1067
Score = 215 bits (548), Expect = 3e-55
Identities = 142/396 (35%), Positives = 217/396 (53%), Gaps = 50/396 (12%)
Query: 351 RRVKSEVEKSLLP-KKEINLYVGMTDMQIEWYKSLLEKDIDAVNGAVGKREGKTRLLNIV 409
+R+K +V K +P KKE+ L V M+ Q E YK+++ + + KR+ K + N++
Sbjct: 325 KRLKKDVLKDKVPPKKELILRVDMSSQQKEVYKAVITNNYQVLTK---KRDAK--ISNVL 379
Query: 410 MQLRKCCNHPYLFEGAEPGPPYTTDEH--LVFNSGKMIVLDKLLKKKKEQGSRVLIFSQM 467
M+LR+ C+HPYL EP + L+ SGK+ +LDK++ K KEQG RVLI++Q
Sbjct: 380 MKLRQVCSHPYLLPDFEPRFEDANEAFTKLLEASGKLQLLDKMMVKLKEQGHRVLIYTQF 439
Query: 468 SRLLDILEDYCYFRGYEYCRIDGSTSHDERVEAIDEYNKPNSEKFIFLLTTRAGGLGINL 527
L +LEDY F+ + Y RIDG S ER ID +N NS +F FLL+TRAGG+GINL
Sbjct: 440 QHTLYLLEDYFTFKNWNYERIDGKISGPERQVRIDRFNAENSNRFCFLLSTRAGGIGINL 499
Query: 528 VTADTVVLYDSDWNPQADLQAMDRAHRIGQKKQVFVYRFVTENAIEEKVIERAAQKLRLD 587
TADTV++YDSDWNP ADLQAM R HR+GQ +V +YR + + +EE+++E K+ L+
Sbjct: 500 ATADTVIIYDSDWNPHADLQAMARVHRLGQTNKVMIYRLIHKGTVEERMMEITKNKMLLE 559
Query: 588 QLVIQQGTGKKTSALTNNKDDLIDMIQFGARDMLQH------GSGNITVDE-DIDEILKK 640
LV+ GK+ +D+L D+I++G++++ SG I D+ I+++L +
Sbjct: 560 HLVV----GKQHLC----QDELDDIIKYGSKELFSEENDEAGRSGKIHYDDAAIEQLLDR 611
Query: 641 GERKTLEL------------NAKYESLG-LDDLQKFNGMADQSAYEWNGTNFEKKKPDDH 687
+E+ N K S +DD + + + A E N ++ H
Sbjct: 612 NHVDAVEVSLDDEEETDFLKNFKVASFEYVDDENEAAALEEAQAIE-NNSSVRNADRTSH 670
Query: 688 TVDWINPP-------------KRERRREQPLYSVDD 710
D + KR+R +Q +Y+ DD
Sbjct: 671 WKDLLKDKYEVQQAEELSALGKRKRNGKQVMYAEDD 706
Score = 84.7 bits (208), Expect = 7e-16
Identities = 46/102 (45%), Positives = 63/102 (61%), Gaps = 3/102 (2%)
Query: 127 SPSFIKEGKLRDYQVYGLNWLISLHESKLSGILADEMGLGKTLQSISFLGYLRYIKGIEG 186
+P F+ G L YQ+ GLN+L K + ILADEMGLGKT+QSI+FL L +
Sbjct: 217 TPEFLT-GTLHTYQLEGLNFLRYSWSKKTNVILADEMGLGKTIQSIAFLASL--FEENLS 273
Query: 187 PYIVIVPKSTLDNWQREFAKWTPEVKTVILQGDKDFRKELIE 228
P++V+ P ST+ NW+REFA W P + V+ GD + R + E
Sbjct: 274 PHLVVAPLSTIRNWEREFATWAPHMNVVMYTGDSEARDVIWE 315
>CE15856 [K] KOG0392 SNF2 family DNA-dependent ATPase domain-containing
protein
Length = 1529
Score = 211 bits (538), Expect = 4e-54
Identities = 167/572 (29%), Positives = 276/572 (48%), Gaps = 78/572 (13%)
Query: 136 LRDYQVYGLNWLISLHESKLSGILADEMGLGKTLQ---SISFLGYLRYIKGIEGPYIVIV 192
LR+YQ+ G+ W+ L L GILAD+MGLGKTLQ SI+ + +++
Sbjct: 982 LREYQLEGITWIRFLRTYGLHGILADDMGLGKTLQTMCSIALSVDRDEMSEFHRCSLIVC 1041
Query: 193 PKSTLDNWQREFAKWTPEVKTVILQGDKDFRKELIETKILTCNFDVLITSYEMVLKEKLT 252
P++ +D+W E+ ++ P+ + K+ + +I +D L T+Y M
Sbjct: 1042 PRTLVDHWCLEWNRFFPQR----VPASKNLTR-CHGAEICVIAYDELKTAYMMDR----- 1091
Query: 253 LKRFAWEYILIDEAHRIKNEQSALSQVIRLFYSKNRLLITGTPLQNNLHELWALLNFLLP 312
W YI++DE H ++N + + K+RL+++GTP+QN+ +LW+L +L+P
Sbjct: 1092 ----VWNYIVLDEGHVMRNSKLRAWKFASQLVGKSRLILSGTPVQNSPADLWSLFAWLMP 1147
Query: 313 DVFGDSEVFDEWFQQN--------GKEEDQEV---VVQQLHSVLQPFLLRRVKSEVEKSL 361
G + F F + E D + + QLH ++ PF++RR+K+EV K L
Sbjct: 1148 GYLGSEKQFRSQFLKKIMKCRLPKANEADLKAGSAAISQLHKLVLPFVMRRLKTEVLKEL 1207
Query: 362 LPKKEINLY-VGMTDMQIEWYKSLLEKDIDAVNGAVGKREGKTRLLNIVMQLRKCCNHPY 420
P+K + Y +T+ Q E Y+ ++++ + G + L+ ++ LRK +H
Sbjct: 1208 -PEKNVQDYECELTEDQKEIYRFVVDRCTSSQEDV-----GLSSLVTLIT-LRKLTDHTK 1260
Query: 421 LFEG--AEPGPP-YTTDEHLVFNSGKMIVLDKLL------KKKKEQ-------------G 458
L A+ G P Y + L SGKM L +LL K E+ G
Sbjct: 1261 LVHDTLAKIGAPQYILSKALAAKSGKMEALKQLLIECEICKNPDEEVEQPEDLGGLVASG 1320
Query: 459 SRVLIFSQMSRLLDILEDYCYFRGY----EYCRIDGSTSHDERVEAIDEYNKPNSEKFIF 514
R LIF Q ++ D + + +DGS +R++ ++ +N+ + +
Sbjct: 1321 HRALIFCQWKTSAKLVSDALKSGEFGSVVSHLVLDGSVPAGDRMKMVNRFNEDKTID-VL 1379
Query: 515 LLTTRAGGLGINLVTADTVVLYDSDWNPQADLQAMDRAHRIGQKKQVFVYRFVTENAIEE 574
+LTT GG+G+NL ADTV+ D DWNP DLQA+DRAHR+GQ + V VYR +T+ +EE
Sbjct: 1380 ILTTHVGGVGLNLTGADTVIFLDHDWNPMKDLQAIDRAHRLGQTRNVNVYRLITQGTVEE 1439
Query: 575 KVIERAAQKLRLDQLVIQQGTGKKTSALTNNKDDLIDMIQFGARDMLQHGSGNITVDEDI 634
KV+ A KL Q +I TS +T +L++M + + G
Sbjct: 1440 KVMSLAKFKLNTAQALI---GADNTSMMTMETGELMNMFTLDGDEAKKKPGGG------- 1489
Query: 635 DEILKKGERKT-----LELNAKYESLGLDDLQ 661
+ KK ++ T ++L + ++ DD Q
Sbjct: 1490 EPAAKKSKKSTGAPEEVDLASMWDESQYDDFQ 1521
>CE11028 [KL] KOG0387 Transcription-coupled repair protein CSB/RAD26
(contains SNF2 family DNA-dependent ATPase domain)
Length = 1785
Score = 203 bits (516), Expect = 1e-51
Identities = 145/485 (29%), Positives = 239/485 (48%), Gaps = 45/485 (9%)
Query: 135 KLRDYQVYGLNWLISLHESKLSGILADEMGLGKTLQSISFLGYLRYIK-------GIEGP 187
KL +Q G+ WL + + GILADEMGLGKT+QS+ FL ++ G++
Sbjct: 193 KLHKFQQEGVEWLQKKTDHRSGGILADEMGLGKTIQSVVFLRSIQETARTHYKTTGLDTA 252
Query: 188 YIVIVPKSTLDNWQREFAKWTPEVKTVILQGDKD-----------FRKELIETKILTCNF 236
+++ S + W +E +W P+ + +L FRK K +
Sbjct: 253 -LIVCHVSIIAQWIKELNQWFPKARVFLLHSHCSTGRQEDYVGSIFRKLQRRRKEYP-DG 310
Query: 237 DVLITSYEMVLKEKLTLKRFAWEYILIDEAHRIKNEQSALSQVIRLFYSKNRLLITGTPL 296
+++T+Y + K K + + W+ +++DE H I+NE + S +R + R ++TGTP
Sbjct: 311 AIILTTYSLFTKLKKPIVKHLWQVVILDEGHYIRNENTKCSIAMRKLMTTQRFILTGTPF 370
Query: 297 QNNLHELWALLNFLLPDVFGDSEVFDEWFQQ------------NGKEEDQEVVVQQLHSV 344
QN L E W L++F+ P DS F F + E +V LH
Sbjct: 371 QNRLSEFWKLVDFVHPGRLSDSATFHRNFTHIINAGANLNCSPEAAAKAYECLVA-LHIA 429
Query: 345 LQPFLLRRVKSEVEKSL-LPKK-EINLYVGMTDMQIEWYKSLLEKDIDAVNGAVGKREGK 402
++P +LRR++ + ++ L LP+K EI L ++ Q Y + VN + +R
Sbjct: 430 VKPLILRRLQEDHKEVLQLPEKQEIVLSCELSKRQRRLYMEY--GNSHQVNEIIERR--- 484
Query: 403 TRLLNIVMQLRKCCNHPYLFEGAEPGPPYTTDEHLVFNSGKMIVLDKLLKKK-KEQGSRV 461
+ + L CNHP ++ P P + +SGK+ + KL K +RV
Sbjct: 485 LKAFVGINHLTNICNHPGIYRSLSPASPKFGS---IKDSGKVEMTFKLFDDWFKSPTNRV 541
Query: 462 LIFSQMSRLLDILEDYCYFRGYEYCRIDGSTSHDERVEAIDEYNKPNSEKFIFLLTTRAG 521
++F+Q ++ ++E + +G + + G+ S R + I ++ S K +FL+TTRAG
Sbjct: 542 ILFTQRRTVITMMEYFLAEKGIKCVSLTGADSAAARPKIIKKFEDDVSIK-VFLMTTRAG 600
Query: 522 GLGINLVTADTVVLYDSDWNPQADLQAMDRAHRIGQKKQVFVYRFVTENAIEEKVIERAA 581
GLG+NL A+ V+++D DWNPQAD QA +R +R+GQ V +YR V+ IE+ +
Sbjct: 601 GLGLNLTCANKVIIFDPDWNPQADNQAKNRIYRMGQTNDVAIYRLVSNGTIEDLKFFKQV 660
Query: 582 QKLRL 586
QK L
Sbjct: 661 QKENL 665
Score = 84.7 bits (208), Expect = 7e-16
Identities = 128/646 (19%), Positives = 270/646 (40%), Gaps = 96/646 (14%)
Query: 189 IVIVPKSTLDNW------QREFAKWTPEVKTVILQGDKDFRKELI----ETKILTCNFDV 238
+++ P++ L W Q ++A+ K + D+ +++ ETK + V
Sbjct: 1100 LIVCPEAKLSEWMLAIRHQFDYARIFVLHKASTTGHETDYVEKIFQDLKETKKIPFGA-V 1158
Query: 239 LITSYEMVLKEKLTLKRFAWEYILIDEA-----HRIKNEQSALSQVIRLFYSKNRLLITG 293
L+T++ K + + W+ + +D+ +++N+ + ++ + NR + T
Sbjct: 1159 LLTTFAEFGKHEKAIVDHQWQLVYLDQGLFEMTRQMRNQIEGMKKL----KTPNRFIFTD 1214
Query: 294 TPLQNNLHELWALLNFLLPDVFGDSEVFDEWFQQ--------NGKEEDQEVV---VQQLH 342
T +++ L ELW ++F+ P D + F FQ + E+ + LH
Sbjct: 1215 TSVRDRLEELWWNVDFVFPGRLSDYKTFQTNFQNVIEIGCRLDATPEEASTAYECIVALH 1274
Query: 343 SVLQPFLLRRV---------KSEVEKSLLPKKEINLYVGMTDMQIEWYKSL--------- 384
L+P +L R+ + E+ K + ++ ++V Q +++ +
Sbjct: 1275 VALKPLILSRLIKNPNDWFCRREISKKEVEHIKVRIFVKQYFEQTLFFQDIICPLSKRQR 1334
Query: 385 ----LEKDIDAVNGAVGKREGKTRLLNIVMQLRKCCNHPYLFEGAEPGPPYTTDEHLVFN 440
+ K D V G + R+ + + +L C+HP + +G P T + +
Sbjct: 1335 RCLKIYKRSDEVQGIL--RQSSAACVGL-KKLTDICDHPGIHKGV---TPETKKFGSIED 1388
Query: 441 SGKMIVLDKLLKK-KKEQGSRVLIFSQMSRLLDILEDYCYFRGYEYCR-IDGSTSHDERV 498
SGK+ ++ +LL G++V+IF+Q ++ +LE + + YC + ++D
Sbjct: 1389 SGKVRIVFQLLDMWLGTPGAKVVIFTQRRQVAVMLEHFMKQKRIAYCSFLKAKNAYDR-- 1446
Query: 499 EAIDEYNKPNSEKFIFLLTTRAGGLGINLVTADTVVLYDSDWNPQADLQAMDRAHRIGQK 558
E + Y + ++ I L + LG+ L A+ V+++D +WNP +D++ + +K
Sbjct: 1447 ENVVNYFENTTDVQILLAPSIMFKLGMQLKKANKVIIFDPEWNPDSDVKHTREMSFLTKK 1506
Query: 559 -KQVFVYRFVTENAIEEKVIERAAQKLRLDQLVIQQGTGKKTSALTNNKDDLIDMIQFGA 617
+ V V R V+E +E+ + + +G + L++ K + F
Sbjct: 1507 VEDVTVVRLVSEGTVEDSSYFKKLWE-----------SGLASRLLSDPKFE-----PFVP 1550
Query: 618 RDMLQHGSGNITVDEDIDEILKKGERKTLELNAKYESLGLDDLQKFNGMADQSAYEWNGT 677
R L+ +TV I K + ++ + K L +D Q + + D + + T
Sbjct: 1551 RTTLEE---FLTVRPKIK--AGKNDMPVVKSHMKNRLLEYEDKQLLSSIIDTTRLDTIRT 1605
Query: 678 NFEKKKPDDHTVDWINPPKRERRREQPLYSVDD----YYREVIGNGKSKPSGSNTPALKL 733
+F + T D I R + + +D Y+R++ +P+ + P +
Sbjct: 1606 HFTSFQYHSTTSDRIKSRDVVNRAVRSIIQIDSRLARYWRQMYHQIVDEPT-LDPPNPEF 1664
Query: 734 PKQPKVIRMTYYQFAHPEFVRLQELEQLWYKKSVGYKITAYDVKEH 779
+P I Y++ HP R + E+L + ++ A DV+ H
Sbjct: 1665 YVEPMQID-PYWEAVHPMVPRTSDREELNFLVAM-----AVDVRSH 1704
>7300511 [L] KOG0388 SNF2 family DNA-dependent ATPase
Length = 1477
Score = 200 bits (508), Expect = 1e-50
Identities = 132/416 (31%), Positives = 218/416 (51%), Gaps = 57/416 (13%)
Query: 133 EGKLRDYQVYGLNWLISLHESKLSGILADEMGLGKTLQSISFLGYLRYIKGIEGPYIVIV 192
+G L+ YQ+ G+ WL ++++ +SGILADEMGLGKT+QSI+FL ++ G+ P +V
Sbjct: 532 KGTLKGYQIKGMTWLANIYDQGISGILADEMGLGKTVQSIAFLCHIAEHYGVFVPDFKVV 591
Query: 193 PKSTLDNWQREFAKWTPEVKTVILQGDKDFRKELIETKILTCNFDVLITSYEMVLKEKLT 252
P W + IL+ D ++ + T+ +F V+ITSY++V+ +
Sbjct: 592 PY------------WGSPAERKILRQFWD--QKHLHTR--DASFHVVITSYQLVVSDYKY 635
Query: 253 LKRFAWEYILIDEAHRIKNEQSALSQVIRLFYSKNRLLITGTPLQNNLHELWALLNFLLP 312
R W+Y+++DEA IK+ S +++ F +NRLL++GTP+QN++ ELWALL+F++P
Sbjct: 636 FNRIKWQYMVLDEAQAIKSAASQRWKLLLGFSCRNRLLLSGTPIQNSMAELWALLHFIMP 695
Query: 313 DVFGDSEVFDEWFQQN------GKEEDQEVVVQQLHSVLQPFLLRRVKSEVEKSLLPKKE 366
+F + F+EWF ++ K E + +LH +L+PF+LRR+K +VE L K E
Sbjct: 696 TLFDSHDEFNEWFSKDIESHAENKTGIDEKQISRLHMILKPFMLRRIKKDVENELSDKIE 755
Query: 367 INLYVGMTDMQIEWYKSLLEK-------DIDAVNGAVGKREGKTRLLNIVMQLRKCCNHP 419
I +Y +T Q Y++L +K + + + + L+N+VMQ RK CNHP
Sbjct: 756 IMVYCPLTIRQKLLYRALKQKIRIEDLLHLTSGSTTTSSSSSASNLMNLVMQFRKVCNHP 815
Query: 420 YLFEGAEPGPPY------TTDEHLVFNSGKMIVLDKLLKKKKEQGSRVLIFSQMSRLLDI 473
LFE + P+ T L+ G ++ ++L +K L+++++ +
Sbjct: 816 ELFERRDARSPFFMRCAEYTIPRLIHEEG---LIHRMLPSRKH-----LLYNRLLHYRRV 867
Query: 474 LEDYCYFRGYEYCRIDGSTSHDERVEAID---------EYNKPNS--EKFIFLLTT 518
LE Y Y R D R + ++ +Y PNS + FIF T
Sbjct: 868 LEKYPLL---AYRRFWWKKQPDSRYQLLEPMLENKLALDYMPPNSVLKNFIFTAMT 920
Score = 98.6 bits (244), Expect = 5e-20
Identities = 49/116 (42%), Positives = 79/116 (67%), Gaps = 1/116 (0%)
Query: 435 EHLVFNSGKMIVLDKLLKKKKEQGSRVLIFSQMSRLLDILEDYCYFRGYEYCRIDGSTSH 494
E L+ ++GK+ VLD LL + K G RVLI+SQM++++D+LE+Y + R + Y R+DGS+
Sbjct: 1080 ETLITDAGKLFVLDNLLTRLKANGHRVLIYSQMTKMIDLLEEYMWHRKHRYMRLDGSSKI 1139
Query: 495 DERVEAIDEYNKPNSEKFIFLLTTRAGGLGINLVTADTVVLYDSDWNPQADLQAMD 550
R + + ++ + ++ F+FLL+TRAGGLGINL ADT+ + + P+ +L D
Sbjct: 1140 SARRDMVADF-QTRADIFVFLLSTRAGGLGINLTAADTLKSSVTPYRPKPNLIRSD 1194
>SPAC22F3.03c [L] KOG0390 DNA repair protein SNF2 family
Length = 768
Score = 198 bits (503), Expect = 4e-50
Identities = 155/569 (27%), Positives = 267/569 (46%), Gaps = 54/569 (9%)
Query: 156 SGILADEMGLGKTLQSISFL------GYLRYIKGIEGPYIVIVPKSTLDNWQREFAKWT- 208
S ILADEMGLGKTLQ+I+ + Y +V+ P + L NW+ EF W
Sbjct: 187 SAILADEMGLGKTLQTITVVWTLLKQSYYANRSSTINNAMVVAPVTLLKNWENEFYNWLG 246
Query: 209 -PEVKTVILQGDKDFRKELIETKILTCNFDVLITSYEMVLKEKLTLKRFAW----EYILI 263
+ I + +DF+ E K + ++IT YE V L+ + + ++
Sbjct: 247 HERIHVYIARCAEDFQ-EFTSNK----TYSIIITGYETVCTY---LRNYGCGIDIDLLIC 298
Query: 264 DEAHRIKNEQSALSQVIRLFYSKNRLLITGTPLQNNLHELWALLNFLLPDVFGDSEVFDE 323
DEAHR+K+ S + ++ RLL+TGTPLQN+L E ++++NF++P G F
Sbjct: 299 DEAHRLKSMSSQTWITLNKLKTRKRLLLTGTPLQNDLSEYFSMVNFIIPGSLGTPNSFKA 358
Query: 324 WFQQ--------NGKEEDQEVV---VQQLHSVLQPFLLRRVKSEVEKSLLPKKEINLYVG 372
+++ N D + +Q+L F LRR + + K L P+ +I L++
Sbjct: 359 QYERPILRSRSMNASSRDISLGAARLQRLFEFTSNFTLRRKANILAKHLPPRTDIVLFIK 418
Query: 373 MTDMQIEWYKSLLEKDIDAVNGAVGKREGKTRLLNIVMQLRKCCNHPYLFEGAEPGPPYT 432
T Q Y +L+ G + K L I+ +L K CN L + T
Sbjct: 419 PTHQQENVYGHVLD-------GFKSSVDQKGYYLKILTRLSKICNSTILLRNEKENFLST 471
Query: 433 T--------DEHLVFNSGKMIVLDKLLKKKKEQGSRVLIFSQMSRLLDILEDYCYFRGYE 484
E+++ +S K+ +L LLK + + +I SQ L+++E +
Sbjct: 472 ELQDKHVFEQENMLLSSSKLQILAALLKSFQRGCQKAVIVSQYKETLELIELFLSILHVR 531
Query: 485 YCRIDGSTSHDERVEAIDEYNKPNSEKF-IFLLTTRAGGLGINLVTADTVVLYDSDWNPQ 543
+C++ GST ER + +N + ++F + LL+++AGG G+NL + +++Y+ WNP
Sbjct: 532 FCKLLGSTPFSERDLIVHNFNTSSFKEFSVLLLSSKAGGCGLNLTGSTRLIIYEPSWNPA 591
Query: 544 ADLQAMDRAHRIGQKKQVFVYRFVTENAIEEKVIERAAQKLRLDQLVIQQGTGKKTSALT 603
DLQA+ R +R GQK+ V +Y F++ ++E++ R K L I +K + T
Sbjct: 592 QDLQALSRIYRSGQKRPVCIYTFLSSGMLDERIFIRQNTKQGLSSSFIDSDASQKKNFFT 651
Query: 604 NNKDDLIDMIQFGARDMLQHGSGNITVDED-IDEILKKGERKTLELNAKYESLGLDDLQK 662
+D+ + + + + + D D ID + KK + T +++ +S + K
Sbjct: 652 G--EDIKTLFSYSKTETCL--TYELAFDSDEIDSLTKKKDPLT-KIDHTIDSPNTKEKDK 706
Query: 663 FNGMADQSAYEWNGTNFEKKKPDDHTVDW 691
+ + A E+ TN KK P++ W
Sbjct: 707 -EISSWKKASEYMDTNLGKKCPENAFQGW 734
>At5g63950 [KL] KOG0387 Transcription-coupled repair protein CSB/RAD26
(contains SNF2 family DNA-dependent ATPase domain)
Length = 1053
Score = 197 bits (501), Expect = 7e-50
Identities = 164/555 (29%), Positives = 262/555 (46%), Gaps = 74/555 (13%)
Query: 136 LRDYQVYGLNWLISLHESKLSGILADEMGLGKTLQSISFLGYLRYIKGIEGPYIVIVPKS 195
L +Q GLNWL SLH GIL D+MGLGKT+Q SFL L + K I+ +V+ PK+
Sbjct: 377 LYPHQREGLNWLWSLHTQGKGGILGDDMGLGKTMQICSFLAGLFHSKLIKRA-LVVAPKT 435
Query: 196 TLDNWQREFAKWTPEVKTVILQGDKDFRKELIETKILTCNFDVLITSYEMVLKEKLTLKR 255
L +W +E A T G +E IL +L+T+Y++V L+
Sbjct: 436 LLPHWMKELATVGLSQMTREYYGTSTKAREYDLHHILQGK-GILLTTYDIVRNNTKALQG 494
Query: 256 F------------AWEYILIDEAHRIKNEQSALSQVIRLFYSKNRLLITGTPLQNNLHEL 303
W+Y+++DE H IKN + ++ + S +R++I+GTP+QNNL L
Sbjct: 495 DDHYTDEDDEDGNKWDYMILDEGHLIKNPNTQRAKSLLEIPSSHRIIISGTPIQNNLKAL 554
Query: 304 WALLNFLLPDVFGDSEVFDEWF----QQNGKEEDQEV---VVQQLHSVLQPFLLRRVKSE 356
+ F + ++ + +N + +Q + V + L +QPF LRR+KSE
Sbjct: 555 -SFNRF--------KQNYEHYILRGTDKNATDREQRIGSTVAKNLREHIQPFFLRRLKSE 605
Query: 357 V------EKSLLPKKEINLYVGMTDMQIEWYKSLLEKDI--DAVNGAVGKREGKTRLLNI 408
V L K EI +++ +T Q + Y++ L +I A +G+ L
Sbjct: 606 VFGDDGATSKLSKKDEIVVWLRLTACQRQLYEAFLNSEIVLSAFDGSP---------LAA 656
Query: 409 VMQLRKCCNHPYLF---------EGAEPGPPYTTDEHLVFNSGKMIVLDKLLKKKKEQGS 459
+ L+K C+HP L EG + T +E V M + D + Q
Sbjct: 657 LTILKKICDHPLLLTKRAAEDVLEGMDS--TLTQEEAGVAERLAMHIADNV-DTDDFQTK 713
Query: 460 RVLIFSQMSRLLDILEDYCYFRGYEYCRIDGSTSHDERVEAIDEYNKPNSEKFIFLLTTR 519
I ++S ++ +L D GY + RIDG+T +R++ ++E+ + + IFLLT++
Sbjct: 714 NDSISCKLSFIMSLL-DSLTSNGYSFLRIDGTTKAPDRLKTVEEFQEGHVAP-IFLLTSQ 771
Query: 520 AGGLGINLVTADTVVLYDSDWNPQADLQAMDRAHRIGQKKQVFVYRFVTENAIEEKVIER 579
GGLG+ L AD V++ D WNP D Q++DRA+RIGQ K V VYR +T +EEK+ +
Sbjct: 772 VGGLGLTLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQTKDVIVYRLMTSATVEEKIYRK 831
Query: 580 AAQKLRLDQLVIQQGTGKKTSALTNNKDDLIDMIQFGARDMLQHGSGNITVDEDIDEILK 639
K G T +K+ + Q R++ G V ++ +
Sbjct: 832 QVYK------------GGLFKTATEHKEQIRYFSQQDLRELFSLPKGGFDVSPTQQQLYE 879
Query: 640 KGERKTLELNAKYES 654
+ ++L+ K ES
Sbjct: 880 E-HYNQIKLDEKLES 893
>HsM14149926 [K] KOG0384 Chromodomain-helicase DNA-binding protein
Length = 757
Score = 183 bits (464), Expect = 1e-45
Identities = 103/220 (46%), Positives = 141/220 (63%), Gaps = 7/220 (3%)
Query: 441 SGKMIVLDKLLKKKKEQGSRVLIFSQMSRLLDILEDYCYFRGYEYCRIDGSTSHDERVEA 500
+GK++++DKLL K G +VLIFSQM R LDILEDY R Y Y RIDG + R A
Sbjct: 5 AGKLVLIDKLLPKLIAGGHKVLIFSQMVRCLDILEDYLIQRRYTYERIDGRVRGNLRQAA 64
Query: 501 IDEYNKPNSEKFIFLLTTRAGGLGINLVTADTVVLYDSDWNPQADLQAMDRAHRIGQKKQ 560
ID + KP+S++F+FLL TRAGGLGINL ADT +++DSDWNPQ DLQA R HRIGQ K
Sbjct: 65 IDRFCKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQSKA 124
Query: 561 VFVYRFVTENAIEEKVIERAAQKLRLDQLVIQ--QGTGKKTSALTNNKDDLIDMIQFGAR 618
V VYR +T N+ E ++ ++A+ KL LD+ V+Q G +K ++ D+++ GA
Sbjct: 125 VKVYRLITRNSYEREMFDKASLKLGLDKAVLQDINRKGGTNGVQQLSKMEVEDLLRKGAY 184
Query: 619 DML--QHGSGNITVDEDIDEILKKGERKTLELNAKYESLG 656
L + G+ +EDID+IL +R+T + + E G
Sbjct: 185 GALMDEEDEGSKFCEEDIDQIL---QRRTHTITIQSEGKG 221
>At1g08600 [K] KOG1015 Transcription regulator XNP/ATRX DEAD-box superfamily
Length = 1447
Score = 182 bits (461), Expect = 3e-45
Identities = 162/590 (27%), Positives = 261/590 (43%), Gaps = 111/590 (18%)
Query: 135 KLRDYQVYGLNWL----------ISLHESKLSGILADEMGLGKTLQSISFL-GYLRYIKG 183
KL+ +QV G+ ++ + + L ILA MGLGKT Q I+FL +R +
Sbjct: 686 KLKVHQVTGIRFMWENIIQSISRVKSGDKGLGCILAHTMGLGKTFQVIAFLYTAMRCVDL 745
Query: 184 IEGPYIVIVPKSTLDNWQREFAKWTP-EVKT--VILQGDKDFRKELIETKILTCNFDVLI 240
+++ P + L NW+ EF KW P EVK + + GD + V +
Sbjct: 746 GLKTALIVTPVNVLHNWRSEFEKWMPSEVKPLRIFMLGDVSRERRFDLLTKWRKKGGVFL 805
Query: 241 TSYEMVLKEKL--------------TLKRFAWEYILIDEAHRIKNEQSALSQVIRLFYSK 286
Y L R + ++ DEAH IKN ++ +Q ++ +
Sbjct: 806 MGYTNFRNLSLGRGVKDLNAARGICNALRDGPDILVCDEAHIIKNTKADTTQALKQVKCQ 865
Query: 287 NRLLITGTPLQNNLHELWALLNFLLPDVFGDSEVFDEWFQQ--------NGKEEDQEVVV 338
R+ +TG+PLQNNL E + +++F+ G S F FQ N ED +++
Sbjct: 866 RRIALTGSPLQNNLMEYYCMVDFVREGFLGSSPEFRNRFQNPIENGQHMNSTAEDVKIMN 925
Query: 339 QQLHSV---LQPFLLRRVKSEVEKSLLPKKEINLYVGMTDMQIEWYKSLLEKDIDAVNGA 395
Q+ H + L+ F+ R + V+K L PK + V ++ +Q Y+ LE +G
Sbjct: 926 QRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVISVKLSPLQRILYQRFLEL-YGFSDGR 984
Query: 396 VGKREGKTRLLNIVMQLRKCCNHPYL----FEGAEPG---------PPYTTDEHLVFN-- 440
+R K L + NHP + E ++ G ++DE++ +N
Sbjct: 985 TDERMRKN-FFAAYQVLAQILNHPGIPQLRSEDSKNGRRGSIVDIPDDCSSDENIDYNMV 1043
Query: 441 --------------------------------------SGKMIVLDKLLKKKKEQGSRVL 462
SGKMI+L +L + G + L
Sbjct: 1044 TGEKQRTMNDLQDKVDGYLQKDWWVDLLQKNNYKVSDFSGKMILLLDILSMSADVGDKAL 1103
Query: 463 IFSQMSRLLDILEDYC------------YFRGYEYCRIDGSTSHDERVEAIDEYNKPNSE 510
+FSQ LD++E Y + +G ++ RIDG T ER + +D +N+P+++
Sbjct: 1104 VFSQSIPTLDLIELYLSRVPRHGKQGKFWKKGKDWYRIDGKTESSERQKLVDRFNEPDNK 1163
Query: 511 KF-IFLLTTRAGGLGINLVTADTVVLYDSDWNPQADLQAMDRAHRIGQKKQVFVYRFVTE 569
+ L++TRAG LGINL A+ V++ D WNP DLQA+ RA R GQKK VF YR +
Sbjct: 1164 RVKCTLISTRAGSLGINLYAANRVIIVDGSWNPTYDLQAIFRAWRYGQKKPVFAYRLMAR 1223
Query: 570 NAIEEKVIERAAQKLRLDQLVIQQGTGKKTSALTNNKDDLIDMIQFGARD 619
IEEK+ +R K L V+ + +T +K++++ + +F D
Sbjct: 1224 GTIEEKIYKRQVTKEGLAARVVDRQQVHRTI----SKEEMLHLFEFDDDD 1269
>SPAC3G6.12 [L] KOG0388 SNF2 family DNA-dependent ATPase
Length = 1063
Score = 179 bits (455), Expect = 2e-44
Identities = 112/369 (30%), Positives = 185/369 (49%), Gaps = 33/369 (8%)
Query: 8 NQHDEKYWSERRSKFLLDVDPKIAKQRNKEDTYIRFKHLLQITDLFRHFIGIRAKYDKNM 67
N+ E+ ++ + LD K + R + L+ T+L+ HF+G + ++++
Sbjct: 696 NERVERDLRKKAEREALDRAKKEEELRESRRQARKLDFLITQTELYSHFVGRKMDREQDL 755
Query: 68 QKLLKTI---------DAENKVAGTLKEPAGHLARAPRHYRKXXXXXXXXXXXXXXXXXX 118
T D E + E A + R + +
Sbjct: 756 PSATNTASVSEINFDSDEEEDIRRLAVESAQEAVQKAREHSQLFDANRQQSPNNSSSDMN 815
Query: 119 XXXXXXXQSPSFIKEG----------KLRDYQVYGLNWLISLHESKLSGILADEMGLGKT 168
Q+P+ + KL++YQ+ GLNWL +L+E ++GILADEMGLGKT
Sbjct: 816 EGEMNF-QNPTLVNAFEVKQPKMLMCKLKEYQLKGLNWLANLYEQGINGILADEMGLGKT 874
Query: 169 LQSISFLGYLRYIKGIEGPYIVIVPKSTLDNWQREFAKWTPEVKTVILQGDKDFRKELIE 228
+QSIS + YL I GP++VI P STL NWQ+E ++ P++K + G RK L +
Sbjct: 875 VQSISVMAYLAETHNIWGPFLVIAPASTLHNWQQEITRFVPKLKCIPYWGSTKDRKILRK 934
Query: 229 ---TKILTCN----FDVLITSYEMVLKEKLTLKRFAWEYILIDEAHRIKNEQSALSQVIR 281
K +T + F V++TSY++V+ + + W+Y+++DEA IK+ S+ + +
Sbjct: 935 FWCRKNMTYDENSPFHVVVTSYQLVVLDAQYFQSVKWQYMILDEAQAIKSSSSSRWKSLL 994
Query: 282 LFYSKNRLLITGTPLQNNLHELWALLNFLLPDVFGDSEVFDEWFQQNGKEEDQ------E 335
F +NRLL+TGTP+QN + ELWALL+F++P +F F EWF ++ + Q E
Sbjct: 995 AFKCRNRLLLTGTPIQNTMQELWALLHFIMPSLFDSHNEFSEWFSKDIESHAQSNTQLNE 1054
Query: 336 VVVQQLHSV 344
+++LH +
Sbjct: 1055 QQLKRLHMI 1063
>CE23323 [L] KOG0390 DNA repair protein SNF2 family
Length = 751
Score = 179 bits (453), Expect = 3e-44
Identities = 136/504 (26%), Positives = 235/504 (45%), Gaps = 61/504 (12%)
Query: 189 IVIVPKSTLDNWQREFAKWTPEVK--TVILQGDKDFRKELIETKILTCNFDVLITSYEMV 246
++IVP S ++NW+ EF KW ++ VI D K++ L+ SY++
Sbjct: 188 LIIVPSSLVNNWKAEFDKWWRLMRFPAVIALTANDITTYQSTIKLMP----YLVISYDLA 243
Query: 247 LKEKLTLKRFAWEYILIDEAHRIKNEQSALSQVIRLFYSKNRLLITGTPLQNNLHELWAL 306
+ LK ++ ++ DE H++KN L + + RL++TGTP+QN+ E ++L
Sbjct: 244 QRHVEKLKIIRFDVMVCDEGHKLKNLDGKLRKTLLSLEIPRRLILTGTPMQNDFEEFYSL 303
Query: 307 LNFLLPDVFGDSEVFDEWFQQNGKEEDQEVVVQQLHSVLQPFLLRRVKSEVEKSLLPKK- 365
L+F+ P VFG F + +QL+ ++ +LRR ++V+ LP+K
Sbjct: 304 LDFVRPSVFGSIVEFRKMCSDRP---------EQLNELIDECMLRRTAADVDLKHLPEKH 354
Query: 366 EINLYVGMTDMQIEWYKSLLEKDIDAVNGAVGKREGKTRLLNIVMQLRKCCNHPYLF--- 422
E L+ + +Q K + + D + G L+++ R+ NHP L
Sbjct: 355 EYILFCAASPIQ----KHVHSEICDYMTGDA---------LSLIFFARQLANHPKLLLDN 401
Query: 423 --EGAEPGPPYTTDEHL------------VFNSGKMIVLDKLLKKKKEQGSRVLIFSQMS 468
E E + L V SGK+ L ++K + +I S
Sbjct: 402 LREKTEKSKAHKHSPLLLAFDGAHMPRGGVKESGKLTALVDMIKCFRLLQECTVIVSNYI 461
Query: 469 RLLDILEDYCYFRGYEYCRIDGSTSHDERVEAIDEYNKPNSEKFIFLLTTRAGGLGINLV 528
LD+++ C + ++ R+DG T +R + + +N IFLL+T+AGG+G+NL+
Sbjct: 462 ETLDMIQQLCEYLNFKVLRLDGKTQVPDRQKLVRTFNDHRDPSNIFLLSTKAGGVGLNLI 521
Query: 529 TADTVVLYDSDWNPQADLQAMDRAHRIGQKKQVFVYRFVTENAIEEKVIERAAQKLRLDQ 588
A +VL+DSDWNP D QAM R R GQ + +YR +T IEEK+++R +K L
Sbjct: 522 GASRLVLFDSDWNPANDQQAMARIWRDGQVRPCHIYRLITTGTIEEKMLQRQIKKTGLGC 581
Query: 589 LVIQQGTGKKTSALTNNKDDLIDMIQF-------GARDMLQ---HGSG---NITVDEDID 635
++ G + T+ +DL D+ F D+ + G G N +ED
Sbjct: 582 VIDAIEVGDTIATFTD--EDLKDIFTFTGSATECNTHDLCECPCDGCGMLENEMDEEDDG 639
Query: 636 EILKKGERKTLELNAKYESLGLDD 659
+ + + + + ++ + K + + DD
Sbjct: 640 DDVVENDAEKIDKSGKIDKIDSDD 663
>Hs15805014 [R] KOG0391 SNF2 family DNA-dependent ATPase
Length = 3124
Score = 167 bits (423), Expect = 8e-41
Identities = 110/306 (35%), Positives = 159/306 (51%), Gaps = 19/306 (6%)
Query: 134 GKLRDYQVYGLNWLISLHESKLSGILADEMGLGKTLQSISFLGYLRYIKGIEGPYIVIVP 193
G LRDYQ GL+WL L+ L+GILADE GLGKT+Q I+F +L +G GP++V+V
Sbjct: 1053 GALRDYQKIGLDWLAKLYRKNLNGILADEAGLGKTVQIIAFFAHLACNEGNWGPHLVVVR 1112
Query: 194 KSTLDNWQREFAKWTPEVKTVILQGD----KDFRKELIETKILTCNFDVLITSYEMVLKE 249
+ W+ E +W P +K + G K R+E E +F V ITSY +
Sbjct: 1113 SCNILKWELELKRWCPGLKILSYIGSHRELKAKRQEWAEPN----SFHVCITSYTQFFRG 1168
Query: 250 KLTLKRFAWEYILIDEAHRIKNEQSALSQVIRLFYSKNRLLITGTPLQNNLHELWALLNF 309
R W+ ++IDE R+K + + S+ RLL+ +PL N ELW +++F
Sbjct: 1169 LTAFTRVRWKCLVIDEMQRVKGMTERHWEAVFTLQSQQRLLLIDSPLHNTFLELWTMVHF 1228
Query: 310 LLPDVFGDSEVFDEWFQQNGKEEDQEV---VVQQLHSVLQPFLLRRVKSEVEKSLLPKKE 366
L+P G S + + EE Q+ VV +LH V QPF+LRR K +VEK L K E
Sbjct: 1229 LVP---GISRPYLSSPLRAPSEESQDYYHKVVIRLHRVTQPFILRRTKRDVEKQLTKKYE 1285
Query: 367 INLYVGMTDMQIEWYKSLLEKDIDAVNGAVGKREGK-TRLLNIVMQLRKCCNHPYLFEGA 425
L +++ Q K+L E I + G +L+I+++L++ CNHP L E
Sbjct: 1286 HVLKCRLSNRQ----KALYEDVILQPGTQEALKSGHFVNVLSILVRLQRICNHPGLVEPR 1341
Query: 426 EPGPPY 431
PG Y
Sbjct: 1342 HPGSSY 1347
Score = 115 bits (289), Expect = 3e-25
Identities = 69/165 (41%), Positives = 99/165 (59%), Gaps = 3/165 (1%)
Query: 439 FNSGKMIVLDKLLKKKKEQGSRVLIFSQMSRLLDILEDYCYFRGYEYCRIDGSTSHDERV 498
F+SGK+ L LL+K K +G RVLI SQM +LDILE + F Y RID + S ++R
Sbjct: 1859 FDSGKLEALAILLQKLKSEGRRVLILSQMILMLDILEMFLNFHYLTYVRIDENASSEQRQ 1918
Query: 499 EAIDEYNKPNSEKFIFLLTTRAGGLGINLVTADTVVLYDSDWNPQADLQAMDRAHRIGQK 558
E + +N+ + F +L+T + GINLV ADTVV YD+D NP D +A + RIG+
Sbjct: 1919 ELMRSFNR-DRRIFCAILSTHSRTTGINLVEADTVVFYDNDLNPVMDAKAQEWCDRIGRC 1977
Query: 559 KQVFVYRFVTENAIEEKVIERAAQKLRLDQLVIQQGTGKKTSALT 603
K + +YR V+ N+IEEK+++ + L + V QG + LT
Sbjct: 1978 KDIHIYRLVSGNSIEEKLLKNGTKDLIRE--VAAQGNDYSMAFLT 2020
>7298963 [KL] KOG4439 RNA polymerase II transcription termination factor
TTF2/lodestar DEAD-box superfamily
Length = 1061
Score = 162 bits (410), Expect = 3e-39
Identities = 156/624 (25%), Positives = 267/624 (42%), Gaps = 172/624 (27%)
Query: 136 LRDYQVYGLNWLISLHESKL--SGILADEMGLGKTLQSISFLGYLRYIKGIE-------- 185
L ++Q + L W+ S E KL GILAD+MGLGKTL IS + L G E
Sbjct: 439 LMNHQKHALAWM-SWRERKLPRGGILADDMGLGKTLTMISSV--LACKNGQEMSEGKDES 495
Query: 186 -----------------------------GPYIVIVPKSTLDNWQREFAKWTPEVKTVIL 216
G +V+ P S L W+ E K +
Sbjct: 496 SDSDSEDDKNKKRKSVTGWKSKGRKDTRRGGTLVVCPASLLRQWESEVESKVSRQKLTVC 555
Query: 217 QGDKDFRKELIETKILTCNFDVLITSYEMVLKEKLTLKRF---AWEYILIDEAHRIKNEQ 273
+ R+ + K L ++D+++T+Y++V +E +L W I++DEAH ++N +
Sbjct: 556 VHHGNNRET--KGKYLR-DYDIVVTTYQIVAREHKSLSAVFGVKWRRIILDEAHVVRNHK 612
Query: 274 SALSQVIRLFYSKNRLLITGTPLQNNLHELWALLNFLLPDVFGDSEVFDEWFQQNGKEED 333
S S + K R +TGTP+QN +++ALL FL F D + +W
Sbjct: 613 SQSSLAVCDLRGKYRWALTGTPIQNKELDVYALLKFLRCSPFDDLHTWKKWIDNKSAGGQ 672
Query: 334 QEVVVQQLHSVLQPFLLRRVKSEVEK----SLLPKKEINLY-VGMTDMQIEWYKSLL--- 385
+L+ +++ +LRR K++++ + LP KE+ L + + ++ Y++++
Sbjct: 673 N-----RLNLLMKSLMLRRTKAQLQSDGKLNSLPNKELRLIEISLDKEEMNVYQTVMTYS 727
Query: 386 ------------EKDIDA----------------VNGAV------------GKREGKTR- 404
E++ D NGA K+E K+
Sbjct: 728 RTLFAQFLHQRAERETDFNYRSDANKPTYNQIKDPNGAYYKMHEKFARMAGSKKEVKSHD 787
Query: 405 LLNIVMQLRKCCNHPYLFEG---------------------------------------- 424
+L ++++LR+ C HP L +
Sbjct: 788 ILVLLLRLRQICCHPGLIDAMLDGEESQTMGDHSSDSDTPEIDLLAQLNKLAITDTSTDG 847
Query: 425 -------AEPGPPYTTDE--------------HLVFN----SGKMIVLDKLLKKK--KEQ 457
+ GPP DE + VFN S K+ ++ ++LK K
Sbjct: 848 QQSVANAGDDGPPLLPDEARIAKASKNLLKRSNPVFNLHRPSSKINMVIQILKTSILKSS 907
Query: 458 GSRVLIFSQMSRLLDILEDYCYFRGYEYCRIDGSTSHDERVEAIDEYNKPNSEKFIFLLT 517
+ ++ SQ + +LDIL D+ G ++G+ R + ++E+N N++K + LL+
Sbjct: 908 DDKAIVVSQWTSVLDILRDHLSKDGVATLSLNGTIPVKNRQDIVNEFNDRNNQKRVLLLS 967
Query: 518 TRAGGLGINLVTADTVVLYDSDWNPQADLQAMDRAHRIGQKKQVFVYRFVTENAIEEKVI 577
AGG+G+NL+ A+ ++L D WNPQ + QA DR +R+GQKK V +Y+F+ + +E+++
Sbjct: 968 LTAGGVGLNLIGANHLLLLDLHWNPQLEAQAQDRIYRVGQKKNVIIYKFMCVDTVEQRIK 1027
Query: 578 ERAAQKLRLDQLVIQQGTGKKTSA 601
+KL L V+ TG K S+
Sbjct: 1028 GLQDKKLDLADGVL---TGAKVSS 1048
>7296236 [K] KOG0384 Chromodomain-helicase DNA-binding protein
Length = 2237
Score = 159 bits (403), Expect = 2e-38
Identities = 91/221 (41%), Positives = 133/221 (60%), Gaps = 13/221 (5%)
Query: 126 QSPSFIKEGKLRDYQVYGLNWLISLHESKLSGILADEMGLGKTLQSISFLGYLRYIKGIE 185
++P + LR YQ+ GLNWL + + ILADEMGLGKT+QS++F+ + Y GI
Sbjct: 2012 KTPVYKGGNSLRPYQLEGLNWLKFSWYNTHNCILADEMGLGKTIQSLTFVHSV-YEYGIR 2070
Query: 186 GPYIVIVPKSTLDNWQREFAKWTPEVKTVILQG---------DKDFRKELIETKILT--C 234
GP++VI P ST+ NWQREF WT ++ V+ G D ++ + K+L
Sbjct: 2071 GPFLVIAPLSTIPNWQREFEGWT-DMNVVVYHGSVTSKQMIQDYEYYYKTESGKVLKEPI 2129
Query: 235 NFDVLITSYEMVLKEKLTLKRFAWEYILIDEAHRIKNEQSALSQVIRLFYSKNRLLITGT 294
F+VLIT++EM++ + + LK F W +IDEAHR+KN L + +R ++R+L++GT
Sbjct: 2130 KFNVLITTFEMIVTDYMDLKAFNWRLCVIDEAHRLKNRNCKLLEGLRQLNLEHRVLLSGT 2189
Query: 295 PLQNNLHELWALLNFLLPDVFGDSEVFDEWFQQNGKEEDQE 335
PLQNN+ EL++LLNFL P F E F F EE+ +
Sbjct: 2190 PLQNNISELFSLLNFLEPSQFSSQEEFMSEFGSLRTEEESD 2230
>Hs19923174 [KL] KOG4439 RNA polymerase II transcription termination factor
TTF2/lodestar DEAD-box superfamily
Length = 1162
Score = 153 bits (386), Expect = 2e-36
Identities = 144/598 (24%), Positives = 257/598 (42%), Gaps = 151/598 (25%)
Query: 139 YQVYGLNWLISLHESK-LSGILADEMGLGKTLQSISFLGYLRYIKGIEGPY--------- 188
+Q L WL+ K GILAD+MGLGKTL I+ + + + E
Sbjct: 573 HQKQALAWLLWRESQKPQGGILADDMGLGKTLTMIALILTQKNQEKKEEKEKSTALTWLS 632
Query: 189 ------------IVIVPKSTLDNWQREFAKW--TPEVKTVILQG-DKDFRKELIETKILT 233
++I P S + +W+ E K + +++ + G ++D R ++ T
Sbjct: 633 KDDSCDFTSHGTLIICPASLIHHWKNEVEKRVNSNKLRVYLYHGPNRDSRARVLST---- 688
Query: 234 CNFDVLITSYEMVLKEKLTLK--------------------RFAWEYILIDEAHRIKNEQ 273
+D++IT+Y +V KE T K R AW I++DEAH +KN +
Sbjct: 689 --YDIVITTYSLVAKEIPTNKQEAEIPGANLNVEGTSTPLLRIAWARIILDEAHNVKNPR 746
Query: 274 SALSQVIRLFYSKNRLLITGTPLQNNLHELWALLNFLLPDVFGDSEVFDEWFQQ--NGKE 331
S + + R +TGTP+QNNL ++++LL FL F + F+ W Q NG +
Sbjct: 747 VQTSIAVCKLQACARWAVTGTPIQNNLLDMYSLLKFLRCSPFDE---FNLWRSQVDNGSK 803
Query: 332 EDQEVVVQQLHSVLQPFLLRRVKSEVEKS-----LLPKKEINLY-VGMTDMQIEWYKSLL 385
+ E +L + + LLRR K +++ + +LP+++ L+ + +++ + Y
Sbjct: 804 KGGE----RLSILTKSLLLRRTKDQLDSTGRPLVILPQRKFQLHHLKLSEDEETVYNVFF 859
Query: 386 EKDIDAVNGAVGKREGK-------------------------------------TRLLNI 408
+ A+ + + E + +L+
Sbjct: 860 ARSRSALQSYLKRHESRGNQSGRSPNNPFSRVALEFGSEEPRHSEAADSPRSSTVHILSQ 919
Query: 409 VMQLRKCCNHPYLFEGAEPGPPYTTDEHLVFN---------------------------- 440
+++LR+CC H L + A P E LV +
Sbjct: 920 LLRLRQCCCHLSLLKSALD-PMELKGEGLVLSLEEQLSALTLSELRDSEPSSTVSLNGTF 978
Query: 441 ---------------SGKMIVLDKLLKKKKEQGSRVLIFSQMSRLLDILEDYCYFRGYEY 485
S + L+ + + Q S +I SQ + +L ++ + G Y
Sbjct: 979 FKMELFEGMRESTKISSLLAELEAIQRNSASQKS--VIVSQWTNMLKVVALHLKKHGLTY 1036
Query: 486 CRIDGSTSHDERVEAIDEYNKPNSEKFIFLLTTRAGGLGINLVTADTVVLYDSDWNPQAD 545
IDGS + +R++ ++ +N + + L++ AGG+G+NL + + L D WNP +
Sbjct: 1037 ATIDGSVNPKQRMDLVEAFNHSRGPQ-VMLISLLAGGVGLNLTGGNHLFLLDMHWNPSLE 1095
Query: 546 LQAMDRAHRIGQKKQVFVYRFVTENAIEEKVIERAAQKLRLDQLVIQQGTGKKTSALT 603
QA DR +R+GQ+K V ++RFV E +EEK+++ +K L + V+ G+G+ + LT
Sbjct: 1096 DQACDRIYRVGQQKDVVIHRFVCEGTVEEKILQLQEKKKDLAKQVL-SGSGESVTKLT 1152
>CE11083 [KL] KOG4439 RNA polymerase II transcription termination factor
TTF2/lodestar DEAD-box superfamily
Length = 1091
Score = 152 bits (385), Expect = 2e-36
Identities = 141/617 (22%), Positives = 252/617 (39%), Gaps = 156/617 (25%)
Query: 135 KLRDYQVYGLNWLISLH-ESKLSGILADEMGLGKTLQSISFLGYLRYIKGIE-------- 185
+L +Q GL W+ + + GILAD+MGLGKTL IS + + + +
Sbjct: 470 ELMPHQKAGLTWMRWRETQPQPGGILADDMGLGKTLSMISLIAHQKAARRARREDGNDDK 529
Query: 186 ----------------GPYIVIVPKSTLDNWQREFAKWTPE--VKTVILQGDKDFRKELI 227
+++ P S + W E + + + T + G K R I
Sbjct: 530 DKEKRKVVKEQGLIPSNGTLIVAPASLIHQWDAEIDRRLDDSVLSTYMFHGTKKQRD--I 587
Query: 228 ETKILTCNFDVLITSYEMVLKEKL---------------------------------TLK 254
+ + L +DV+IT++ ++ E + L
Sbjct: 588 DARRLA-RYDVVITTFNLIANELIEKIRTKSKADDSSDGESDSNHTGIRRAVGKDDSVLA 646
Query: 255 RFAWEYILIDEAHRIKNEQSALSQVIRLFYSKNRLLITGTPLQNNLHELWALLNFLLPDV 314
+ W +++DEAH IKN QS S+ + + +R ++GTP+ NNL +L++L+ FL
Sbjct: 647 QICWSRVILDEAHTIKNRQSLASKAVCRLSAFSRWCLSGTPIHNNLWDLYSLVRFLRIRP 706
Query: 315 FGDSEVFDEWFQQNGKEEDQEVVVQQLHSVLQPFLLRRVKS------------------E 356
F D + + E + ++ +++ + + LLRR K E
Sbjct: 707 FSDDKYWKESIMPM-----KPIMADRVNLLTKNLLLRRTKDQTCAVTNQKLVQLPPKNVE 761
Query: 357 VEKSLLPKKEINLYVGMTDMQIEWYKSLLEKDIDAVN-GAVGKR------EGKTR----- 404
V + L E Y M + ++ K LL+ D N G + +R EG+ +
Sbjct: 762 VHELELDGDEAQAYEIMMEAAKKFVKKLLQDSNDMKNHGFIPRRNRRAGKEGEVQNPFNF 821
Query: 405 ----------------LLNIVMQLRKCCNH-----------PYLFEGAEPGPPYTTDE-- 435
+L ++++LR+ C H + G + D+
Sbjct: 822 GPRDLAAGSNFEKMSCVLMLLLRLRQACVHFNITKTGVDMDAFSLIGGDNAEEANVDDLN 881
Query: 436 -------HLVFNSGKMIVLDK----------------------LLKKKKEQGSRVLIFSQ 466
++ +G DK +++ E+ +V+I SQ
Sbjct: 882 ELLEKTMNMTLGNGDNEERDKPRATTRIFDPDYLSCKIKNTLEIVENIMEKKEKVVIVSQ 941
Query: 467 MSRLLDILEDYCYFRGYEYCRIDGSTSHDERVEAIDEYNKPNSEKFIFLLTTRAGGLGIN 526
+ +L+++E + G++Y I G +R E +D +N+ + LL+ AGG+G+N
Sbjct: 942 WTSVLNLIEIHIKSSGFKYTSITGQVLVKDRQERVDSFNREKGGARVMLLSLAAGGVGLN 1001
Query: 527 LVTADTVVLYDSDWNPQADLQAMDRAHRIGQKKQVFVYRFVTENAIEEKVIERAAQKLRL 586
L + +V+ D WNP + QA DR +R+GQKK VF++R VT+ IE++V+ K+ L
Sbjct: 1002 LTGGNHLVMVDLHWNPALEQQAFDRIYRMGQKKDVFIHRLVTKGTIEQRVVMLQKDKVAL 1061
Query: 587 DQLVIQQGTGKKTSALT 603
V+ +K + LT
Sbjct: 1062 ASSVLDGNATRKMNKLT 1078
>At1g02670 [L] KOG1002 Nucleotide excision repair protein RAD16
Length = 678
Score = 139 bits (351), Expect = 2e-32
Identities = 139/548 (25%), Positives = 236/548 (42%), Gaps = 82/548 (14%)
Query: 136 LRDYQVYGLNWLISLHESKL-SGILADEMGLGKTLQSISFLGYLRYIKGIE-----GPYI 189
L YQ L W S + GILADEMG+GKT+Q+IS + R + + G +
Sbjct: 134 LLKYQKEFLAWATIQELSAVRGGILADEMGMGKTIQAISLVLARREVDRAKSREAVGHTL 193
Query: 190 VIVPKSTLDNWQREFAKWTPEVKTVILQGDKDFRKELIETKILTCNFDVLITSYEMVLKE 249
V+VP L W E ++ T T +LQ R + ++ + N+D ++T+ +V E
Sbjct: 194 VLVPPVALSQWLDEISRLTSPGSTRVLQYHGPKRDKNVQKLM---NYDFVLTTSPIVENE 250
Query: 250 ----------KLTLKRFAWEYILIDEAHRIKNEQSALSQVIRLFYSKNRLLITGTPLQNN 299
L W I++DEAH IKN S ++ + + R ++GTPLQN+
Sbjct: 251 YRKDEGVDETMSPLHSIKWNRIIVDEAHDIKNRSSRTAKAVFALEATYRWALSGTPLQND 310
Query: 300 LHELWALLNFLLPDVFGDSEVFDEWFQQNGKEEDQEVVVQQL--HSVLQPFLLRRVKS-- 355
+ EL++L+++ + F S F+ + V V+ L ++L + R+++
Sbjct: 311 VDELYSLVSYSFLNFF-YSTYASFAFRHTHITFARNVTVKFLIGGNILPLSIPVRIENVP 369
Query: 356 -----EVEKSLLPKKEINLYVGMTDMQIEWYKSLLEKDIDAVNGAVGKREGKTRLLNIVM 410
++ SL K+ L V D YK + + D A + +++
Sbjct: 370 AVLIMQINTSLGGKRRDALSVVEADFYESLYK-VSKTTFDGYIQAGTLMNNYAHIFGLLI 428
Query: 411 QLRKCCNHPYLFE-----------------------GAEPGPPY--TTDEHLVF------ 439
+LR+ +HPYL G +P Y T+ EH
Sbjct: 429 RLRQAVDHPYLVSYSSPSGANANLLDANKNEKECGFGHDPSKDYFVTSSEHQASKTKLKG 488
Query: 440 ----------------NSGKMIVLDKLLK--KKKEQGSRVLIFSQMSRLLDILEDYCYFR 481
S K+ L + ++ +++ ++ ++FSQ + LD++
Sbjct: 489 FRASSILNRINLDDFKTSTKIEALREEIRFMVERDWSAKAIVFSQFTSFLDLISYALGKS 548
Query: 482 GYEYCRIDGSTSHDERVEAIDEYNKPNSEKFIFLLTTRAGGLGINLVTADTVVLYDSDWN 541
G ++ GS S + A+ + K + + L++ +AGG+ +NL A V + D WN
Sbjct: 549 GVSCVQLVGSMSKAAKDAALKNF-KEEPDCRVLLMSLQAGGVALNLTAASHVFMMDPWWN 607
Query: 542 PQADLQAMDRAHRIGQKKQVFVYRFVTENAIEEKVIERAAQKLRLDQLVIQQGTGKKTSA 601
P + QA DR HRIGQ K V V RF+ E +EEK++ QK + D G ++
Sbjct: 608 PAVERQAQDRIHRIGQCKPVRVVRFIMEKTVEEKIL--TLQKKKEDLFESTLGDSEEAVV 665
Query: 602 LTNNKDDL 609
+DD+
Sbjct: 666 QKLGEDDI 673
>7296909 [B] KOG1000 Chromatin remodeling protein HARP/SMARCAL1 DEAD-box
superfamily
Length = 701
Score = 124 bits (312), Expect = 6e-28
Identities = 110/424 (25%), Positives = 192/424 (44%), Gaps = 46/424 (10%)
Query: 158 ILADEMGLGKTLQSISFLGYLRYIKGIEGPYIVIVPKSTLDNWQREFAKWTPEVKTVILQ 217
++ DEMGLGKT Q+++ Y + + P +V ST D+W + P+V +Q
Sbjct: 266 MICDEMGLGKTYQALAVADYFKD----DWPLLVCTTASTRDSWAKHIMDLLPKVPIHYVQ 321
Query: 218 GDKDFRKELIETKILTCNFDVLITSYEMVLKEKLTLKRFAWEYILIDEAHRIKNEQSALS 277
+ + + E K VLITSY M+ + + L + + +I+ DE+H +KN ++ +
Sbjct: 322 VLNNNQLYVGEAK-------VLITSYNMMERHEDKLMQRKFGFIIFDESHTLKNSKAKCT 374
Query: 278 QVIRLF--YSKNRLLITGTPLQNNLHELWALLNFLLPDVFGDSEVFDEWFQQN----GKE 331
+ +K +L++GTP + EL+ L + E + G +
Sbjct: 375 TTAKRLTDQAKRVVLLSGTPALSRPLELFTQLQMIDGKFMNFMEFTTRYCDGKQSTFGWD 434
Query: 332 EDQEVVVQQLHSVLQ-PFLLRRVKSEVEKSLLPKKEINLYVGMTDMQIEWYKSLLEKDID 390
+ + +++L +L ++LRR K EV L K N + D + W + ++ +D
Sbjct: 435 ANGQSNLEELKVILHLKYMLRRTKVEVLPQLAEK---NRETVVLDPALVWTNAETKETLD 491
Query: 391 AVNGAVGKREGKTRLLNIVMQLRKCCNHPYLFEGAEPGPPYTTDEHLVFNSGKMIVLDKL 450
A N + +G+ I+++ + AE V L L
Sbjct: 492 AFNKELKTAKGRATE-EILLR--------FYARTAE-----------VKTRAVCAYLKTL 531
Query: 451 LKKKKEQGSRVLIFSQMSRLLDILEDYCYFRGYEYCRIDGSTSHDERVEAIDEYNKPNSE 510
+K++K + +IF+ ++D + D+ Y RIDG T D R +++D + K +S
Sbjct: 532 VKEQK----KFIIFAHHRVMMDAISDFLSGLKVHYIRIDGQTRSDHRSDSVDTFQKKSSC 587
Query: 511 KFIFLLTTRAGGLGINLVTADTVVLYDSDWNPQADLQAMDRAHRIGQKKQVFVYRFVTEN 570
K + LL+ +A GI L A+ +V + DWNP QA RAHRIGQ K V + N
Sbjct: 588 K-VALLSLKACNSGITLTAAEIIVFAELDWNPSTLAQAESRAHRIGQTKPVICRYLIAHN 646
Query: 571 AIEE 574
++
Sbjct: 647 TADD 650
>ECU06g0820 [B] KOG1000 Chromatin remodeling protein HARP/SMARCAL1 DEAD-box
superfamily
Length = 556
Score = 124 bits (310), Expect = 1e-27
Identities = 123/474 (25%), Positives = 203/474 (41%), Gaps = 88/474 (18%)
Query: 158 ILADEMGLGKTLQSISFLGYLRYIKGIEGPYIVIVPKSTLDNWQREFAKWTPEVKTVILQ 217
I+AD+MGLGKT+Q+++ Y R E P ++I P S L++W ++ ++ ++++
Sbjct: 143 IVADDMGLGKTIQALAVAYYYR----AEWPLVIIAPASLLEDWADACRRFLG-MEAMVMR 197
Query: 218 GDKDFRKELIETKILTCNFDVLITSYEMVLKEKLTLKRFAWEYILIDEAHRIKNEQSALS 277
+DF +E + + SYE+ L A ++ DE H +K+ Q+ +
Sbjct: 198 RKEDFGQE------------IGVVSYEVASSHANVLACGAG-VVIADECHYLKSLQTKRT 244
Query: 278 QVIRLFYSK--NRLLITGTPLQNNLHELWALLNFLLPDVFG----------DSEVFDEWF 325
+ I K LL++GTP + EL+ +++ + +F + +W+
Sbjct: 245 KAIVPLLQKVSRALLLSGTPAVSRPLELYPIISAVDRTIFPRFAEYGARYCNGRKVGQWY 304
Query: 326 QQNGKEEDQEVVVQQLHSVLQPFLL-RRVKSEVEKSLLPKKEINLYVGMTDMQIEWYKSL 384
G +E LH VL+ FL+ RR K EV L PK + + T Q + K L
Sbjct: 305 DYKGCSNAEE-----LHYVLRKFLMIRRTKDEVLGQLPPKFRRQVVLECTGRQDDPRKDL 359
Query: 385 LEKDIDAVNGAVGKREGKTRLLNIVMQLRKCCNHPYLFEGAEPGPPYTTDEHLVFNSGKM 444
+ + +D N+VMQ R+ G + P
Sbjct: 360 VGESVDT---------------NVVMQYREAV-------GLKVDP--------------- 382
Query: 445 IVLDKLLKKKKEQGSRVLIFSQMSRLLDILEDYCYFRGYEYCRIDGSTSHDERVEAIDEY 504
+ + L E+G + ++F + +++ LE + R RIDGS R + ++
Sbjct: 383 --VKQYLATMVEKGMKFVVFCHHTEMMESLEGFFAERNVPMIRIDGSVPSTSRHLLVKKF 440
Query: 505 NKPNSEKFIFLLTTRAGGLGINLVTADTVVLYDSDWNPQADLQAMDRAHRIGQKKQVFVY 564
+ N E + LL+ A G+ L VV + WNP LQA DR HRIGQK V +
Sbjct: 441 QE-NEEVMVALLSITACSTGLTLTAGRAVVFAELYWNPGVLLQAEDRIHRIGQKSSVDII 499
Query: 565 RFVTENAIEEKVIERAAQKLRL--------DQL----VIQQGTGKKTSALTNNK 606
V + I+E V + KL + +QL V Q G+KT N K
Sbjct: 500 YLVAKGTIDEYVWPKLLSKLNVLESLGVGSNQLKNVGVSSQAAGQKTLCQFNIK 553
>Hs20336209 [K] KOG1015 Transcription regulator XNP/ATRX DEAD-box superfamily
Length = 2492
Score = 123 bits (309), Expect = 1e-27
Identities = 64/183 (34%), Positives = 108/183 (58%), Gaps = 23/183 (12%)
Query: 434 DEHLVFNSGKMIVLDKLLKKKKEQGSRVLIFSQMSRLLDILEDYC--------------- 478
D ++ +SGKM++L ++L+ +E G +VL+FSQ LD++ED+
Sbjct: 2010 DAEVLEHSGKMVLLFEILRMAEEIGDKVLVFSQSLISLDLIEDFLELASREKTEDKDKPL 2069
Query: 479 -------YFRGYEYCRIDGSTSHDERVEAIDEYN-KPNSEKFIFLLTTRAGGLGINLVTA 530
+ R +Y R+DGST+ R + +E+N + N +F+++T+AG LGINLV A
Sbjct: 2070 IYKGEGKWLRNIDYYRLDGSTTAQSRKKWAEEFNDETNVRGRLFIISTKAGSLGINLVAA 2129
Query: 531 DTVVLYDSDWNPQADLQAMDRAHRIGQKKQVFVYRFVTENAIEEKVIERAAQKLRLDQLV 590
+ V+++D+ WNP D+Q++ R +R GQ K V+VYRF+ + +E+K+ +R K L V
Sbjct: 2130 NRVIIFDASWNPSYDIQSIFRVYRFGQTKPVYVYRFLAQGTMEDKIYDRQVTKQSLSFRV 2189
Query: 591 IQQ 593
+ Q
Sbjct: 2190 VDQ 2192
Score = 101 bits (252), Expect = 5e-21
Identities = 96/337 (28%), Positives = 155/337 (45%), Gaps = 53/337 (15%)
Query: 135 KLRDYQVYGLNWLI-----SLHESKLSG----ILADEMGLGKTLQSISFLGYLRYIKGIE 185
KL+ +QV G+ ++ S+ ++K S ILA MGLGKTLQ +SFL + ++
Sbjct: 1559 KLKPHQVDGVQFMWDCCCESVKKTKKSPGSGCILAHCMGLGKTLQVVSFLHTVLLCDKLD 1618
Query: 186 -GPYIVIVPKSTLDNWQREFAKW-----------TPEVKTVILQGDKDFRKELIETKILT 233
+V+ P +T NW EF KW E+ TV ++ + + +
Sbjct: 1619 FSTALVVCPLNTALNWMNEFEKWQEGLKDDEKLEVSELATVKRPQERSYMLQRWQE---- 1674
Query: 234 CNFDVLITSYEMV-------------LKE--KLTLKRFAWEYILIDEAHRIKNEQSALSQ 278
+ V+I YEM LKE L ++++ DE H +KNE SA+S+
Sbjct: 1675 -DGGVMIIGYEMYRNLAQGRNVKSRKLKEIFNKALVDPGPDFVVCDEGHILKNEASAVSK 1733
Query: 279 VIRLFYSKNRLLITGTPLQNNLHELWALLNFLLPDVFGDSEVFDEWF---QQNGKEEDQE 335
+ S+ R+++TGTPLQNNL E ++NF+ ++ G + F F QNG+ D
Sbjct: 1734 AMNSIRSRRRIILTGTPLQNNLIEYHCMVNFIKENLLGSIKEFRNRFINPIQNGQCADST 1793
Query: 336 VV--------VQQLHSVLQPFLLRRVKSEVEKSLLPKKEINLYVGMTDMQIEWYKSLLEK 387
+V L+ +L + R+ + + K L PK E L V MT +Q + Y+ L+
Sbjct: 1794 MVDVRVMKKRAHILYEMLAGCVQRKDYTALTKFLPPKHEYVLAVRMTSIQCKLYQYYLDH 1853
Query: 388 DIDAVNGAVGKR-EGKTRLLNIVMQLRKCCNHPYLFE 423
N + G R + +L L + HP+ +
Sbjct: 1854 LTGVGNNSEGGRGKAGAKLFQDFQMLSRIWTHPWCLQ 1890
>Hs20336207 [K] KOG1015 Transcription regulator XNP/ATRX DEAD-box superfamily
Length = 2288
Score = 123 bits (309), Expect = 1e-27
Identities = 64/183 (34%), Positives = 108/183 (58%), Gaps = 23/183 (12%)
Query: 434 DEHLVFNSGKMIVLDKLLKKKKEQGSRVLIFSQMSRLLDILEDYC--------------- 478
D ++ +SGKM++L ++L+ +E G +VL+FSQ LD++ED+
Sbjct: 1806 DAEVLEHSGKMVLLFEILRMAEEIGDKVLVFSQSLISLDLIEDFLELASREKTEDKDKPL 1865
Query: 479 -------YFRGYEYCRIDGSTSHDERVEAIDEYN-KPNSEKFIFLLTTRAGGLGINLVTA 530
+ R +Y R+DGST+ R + +E+N + N +F+++T+AG LGINLV A
Sbjct: 1866 IYKGEGKWLRNIDYYRLDGSTTAQSRKKWAEEFNDETNVRGRLFIISTKAGSLGINLVAA 1925
Query: 531 DTVVLYDSDWNPQADLQAMDRAHRIGQKKQVFVYRFVTENAIEEKVIERAAQKLRLDQLV 590
+ V+++D+ WNP D+Q++ R +R GQ K V+VYRF+ + +E+K+ +R K L V
Sbjct: 1926 NRVIIFDASWNPSYDIQSIFRVYRFGQTKPVYVYRFLAQGTMEDKIYDRQVTKQSLSFRV 1985
Query: 591 IQQ 593
+ Q
Sbjct: 1986 VDQ 1988
Score = 101 bits (252), Expect = 5e-21
Identities = 96/337 (28%), Positives = 155/337 (45%), Gaps = 53/337 (15%)
Query: 135 KLRDYQVYGLNWLI-----SLHESKLSG----ILADEMGLGKTLQSISFLGYLRYIKGIE 185
KL+ +QV G+ ++ S+ ++K S ILA MGLGKTLQ +SFL + ++
Sbjct: 1355 KLKPHQVDGVQFMWDCCCESVKKTKKSPGSGCILAHCMGLGKTLQVVSFLHTVLLCDKLD 1414
Query: 186 -GPYIVIVPKSTLDNWQREFAKW-----------TPEVKTVILQGDKDFRKELIETKILT 233
+V+ P +T NW EF KW E+ TV ++ + + +
Sbjct: 1415 FSTALVVCPLNTALNWMNEFEKWQEGLKDDEKLEVSELATVKRPQERSYMLQRWQE---- 1470
Query: 234 CNFDVLITSYEMV-------------LKE--KLTLKRFAWEYILIDEAHRIKNEQSALSQ 278
+ V+I YEM LKE L ++++ DE H +KNE SA+S+
Sbjct: 1471 -DGGVMIIGYEMYRNLAQGRNVKSRKLKEIFNKALVDPGPDFVVCDEGHILKNEASAVSK 1529
Query: 279 VIRLFYSKNRLLITGTPLQNNLHELWALLNFLLPDVFGDSEVFDEWF---QQNGKEEDQE 335
+ S+ R+++TGTPLQNNL E ++NF+ ++ G + F F QNG+ D
Sbjct: 1530 AMNSIRSRRRIILTGTPLQNNLIEYHCMVNFIKENLLGSIKEFRNRFINPIQNGQCADST 1589
Query: 336 VV--------VQQLHSVLQPFLLRRVKSEVEKSLLPKKEINLYVGMTDMQIEWYKSLLEK 387
+V L+ +L + R+ + + K L PK E L V MT +Q + Y+ L+
Sbjct: 1590 MVDVRVMKKRAHILYEMLAGCVQRKDYTALTKFLPPKHEYVLAVRMTSIQCKLYQYYLDH 1649
Query: 388 DIDAVNGAVGKR-EGKTRLLNIVMQLRKCCNHPYLFE 423
N + G R + +L L + HP+ +
Sbjct: 1650 LTGVGNNSEGGRGKAGAKLFQDFQMLSRIWTHPWCLQ 1686
>Hs20336205 [K] KOG1015 Transcription regulator XNP/ATRX DEAD-box superfamily
Length = 2454
Score = 123 bits (309), Expect = 1e-27
Identities = 64/183 (34%), Positives = 108/183 (58%), Gaps = 23/183 (12%)
Query: 434 DEHLVFNSGKMIVLDKLLKKKKEQGSRVLIFSQMSRLLDILEDYC--------------- 478
D ++ +SGKM++L ++L+ +E G +VL+FSQ LD++ED+
Sbjct: 1972 DAEVLEHSGKMVLLFEILRMAEEIGDKVLVFSQSLISLDLIEDFLELASREKTEDKDKPL 2031
Query: 479 -------YFRGYEYCRIDGSTSHDERVEAIDEYN-KPNSEKFIFLLTTRAGGLGINLVTA 530
+ R +Y R+DGST+ R + +E+N + N +F+++T+AG LGINLV A
Sbjct: 2032 IYKGEGKWLRNIDYYRLDGSTTAQSRKKWAEEFNDETNVRGRLFIISTKAGSLGINLVAA 2091
Query: 531 DTVVLYDSDWNPQADLQAMDRAHRIGQKKQVFVYRFVTENAIEEKVIERAAQKLRLDQLV 590
+ V+++D+ WNP D+Q++ R +R GQ K V+VYRF+ + +E+K+ +R K L V
Sbjct: 2092 NRVIIFDASWNPSYDIQSIFRVYRFGQTKPVYVYRFLAQGTMEDKIYDRQVTKQSLSFRV 2151
Query: 591 IQQ 593
+ Q
Sbjct: 2152 VDQ 2154
Score = 101 bits (252), Expect = 5e-21
Identities = 96/337 (28%), Positives = 155/337 (45%), Gaps = 53/337 (15%)
Query: 135 KLRDYQVYGLNWLI-----SLHESKLSG----ILADEMGLGKTLQSISFLGYLRYIKGIE 185
KL+ +QV G+ ++ S+ ++K S ILA MGLGKTLQ +SFL + ++
Sbjct: 1521 KLKPHQVDGVQFMWDCCCESVKKTKKSPGSGCILAHCMGLGKTLQVVSFLHTVLLCDKLD 1580
Query: 186 -GPYIVIVPKSTLDNWQREFAKW-----------TPEVKTVILQGDKDFRKELIETKILT 233
+V+ P +T NW EF KW E+ TV ++ + + +
Sbjct: 1581 FSTALVVCPLNTALNWMNEFEKWQEGLKDDEKLEVSELATVKRPQERSYMLQRWQE---- 1636
Query: 234 CNFDVLITSYEMV-------------LKE--KLTLKRFAWEYILIDEAHRIKNEQSALSQ 278
+ V+I YEM LKE L ++++ DE H +KNE SA+S+
Sbjct: 1637 -DGGVMIIGYEMYRNLAQGRNVKSRKLKEIFNKALVDPGPDFVVCDEGHILKNEASAVSK 1695
Query: 279 VIRLFYSKNRLLITGTPLQNNLHELWALLNFLLPDVFGDSEVFDEWF---QQNGKEEDQE 335
+ S+ R+++TGTPLQNNL E ++NF+ ++ G + F F QNG+ D
Sbjct: 1696 AMNSIRSRRRIILTGTPLQNNLIEYHCMVNFIKENLLGSIKEFRNRFINPIQNGQCADST 1755
Query: 336 VV--------VQQLHSVLQPFLLRRVKSEVEKSLLPKKEINLYVGMTDMQIEWYKSLLEK 387
+V L+ +L + R+ + + K L PK E L V MT +Q + Y+ L+
Sbjct: 1756 MVDVRVMKKRAHILYEMLAGCVQRKDYTALTKFLPPKHEYVLAVRMTSIQCKLYQYYLDH 1815
Query: 388 DIDAVNGAVGKR-EGKTRLLNIVMQLRKCCNHPYLFE 423
N + G R + +L L + HP+ +
Sbjct: 1816 LTGVGNNSEGGRGKAGAKLFQDFQMLSRIWTHPWCLQ 1852
>Hs4757978 [K] KOG0385 Chromatin remodeling complex WSTF-ISWI small subunit
Length = 220
Score = 122 bits (307), Expect = 2e-27
Identities = 68/177 (38%), Positives = 100/177 (56%)
Query: 143 GLNWLISLHESKLSGILADEMGLGKTLQSISFLGYLRYIKGIEGPYIVIVPKSTLDNWQR 202
G NWL + IL DEMGLGKT Q+I+ YL EGP++++ P + +R
Sbjct: 15 GSNWLAQRFHCQNGCILGDEMGLGKTCQTIALFIYLAGRLNDEGPFLILCPYVCFEQLER 74
Query: 203 EFAKWTPEVKTVILQGDKDFRKELIETKILTCNFDVLITSYEMVLKEKLTLKRFAWEYIL 262
A+ + DK+ R L + F VL+T+YE+ LK+ LK F W ++
Sbjct: 75 RNAEICSRSFLCNICSDKEERACLQQDLKQESRFHVLLTTYEICLKDASFLKSFPWSVLV 134
Query: 263 IDEAHRIKNEQSALSQVIRLFYSKNRLLITGTPLQNNLHELWALLNFLLPDVFGDSE 319
+DEAHR+KN+ S L + + F LL+TGTP+QN+L EL++LL+F+ PD+F E
Sbjct: 135 VDEAHRLKNQSSLLHKTLSEFSVVFSLLLTGTPIQNSLQELYSLLSFVEPDLFSKEE 191
>SPCC1620.14c [BK] KOG0386 Chromatin remodeling complex SWI/SNF component SWI2
and related ATPases (DNA/RNA helicase superfamily)
Length = 430
Score = 120 bits (301), Expect = 1e-26
Identities = 68/143 (47%), Positives = 87/143 (60%), Gaps = 15/143 (10%)
Query: 507 PNSEKFIFLLTTRAGGLGINLVTADTVVLYDSDWNPQADLQAMDRAHRIGQKKQVFVYRF 566
P S+ +IF+L+TRAGGLG+NL TADTV+++D+DWNP DLQA DRAHRIGQ K+V + R
Sbjct: 2 PKSDVYIFMLSTRAGGLGLNLQTADTVIIFDTDWNPHQDLQAQDRAHRIGQTKEVRILRL 61
Query: 567 VTENAIEEKVIERAAQKLRLDQLVIQQGTGKKTSALTNNKDDLIDMIQFGARDMLQHGSG 626
+TE +IEE ++ RA KL LD VIQ G S + L R +L+H
Sbjct: 62 ITEKSIEENILSRAQYKLDLDGKVIQAGKFDNKSTPEEREAFL--------RSLLEH--- 110
Query: 627 NITVDEDIDEILKKGERKTLELN 649
D D D L GE + ELN
Sbjct: 111 ----DGDDDHDLTYGELQDDELN 129
>7301343 [K] KOG1015 Transcription regulator XNP/ATRX DEAD-box superfamily
Length = 1311
Score = 115 bits (289), Expect = 3e-25
Identities = 79/279 (28%), Positives = 141/279 (50%), Gaps = 31/279 (11%)
Query: 430 PYTTDEHL--VFNSGKMIVLDKLLKKKKEQGSRVLIFSQMSRLLDILEDY---------- 477
P+ + L V +S K+++L +LL++ + G ++L+FSQ + LD++E +
Sbjct: 884 PFVEERELNNVHHSPKLLILLRLLQQCEAIGDKLLVFSQSLQSLDVIEHFLSLVDSNTKN 943
Query: 478 ------------CYFRGYEYCRIDGSTSHDERVEAIDEYNK-PNSEKFIFLLTTRAGGLG 524
C+ G +Y R+DGS S ++R ++N N +FL++TRAGGLG
Sbjct: 944 YEFEGDVGDFKGCWTSGKDYFRLDGSCSVEQREAMCKQFNNITNLRARLFLISTRAGGLG 1003
Query: 525 INLVTADTVVLYDSDWNPQADLQAMDRAHRIGQKKQVFVYRFVTENAIEEKVIERAAQKL 584
INLV A+ VV++D WNP D Q++ R +R GQ K ++YR + +E+KV ER K
Sbjct: 1004 INLVAANRVVIFDVSWNPSHDTQSIFRVYRFGQIKPCYIYRLIAMGTMEQKVYERQVAKQ 1063
Query: 585 RLDQLVIQQGTGKKTSALTNNKDDLIDMIQFGARDMLQHGSGNITVDEDIDEILKKGERK 644
+ VI + + + N+ DL+++ + + + + D EIL + E+
Sbjct: 1064 ATAKRVIDE----QQISRHYNQTDLMELYSYELKPSTEREMPILPKDRLFAEILTEHEKL 1119
Query: 645 TLELNAKYESLGLDDLQKFNGMADQSAYEWNGTNFEKKK 683
+ + +++SL L+ + N ++ W EK +
Sbjct: 1120 IFKYH-EHDSL-LEQEEHENLTEEERKSAWAEYEAEKTR 1156
Score = 94.4 bits (233), Expect = 9e-19
Identities = 92/329 (27%), Positives = 153/329 (45%), Gaps = 47/329 (14%)
Query: 135 KLRDYQVYGLNWLI-----SLHESKL---SG-ILADEMGLGKTLQSISFLGYLRYIKGIE 185
KL+ +QV G+ ++ +L ES+ SG ILA MGLGKTLQ ++ L
Sbjct: 454 KLKPHQVAGVKFMWDACFETLKESQEKPGSGCILAHCMGLGKTLQVVTLSHTLLVNTRRT 513
Query: 186 GP--YIVIVPKSTLDNWQREFAKWTP-----EVKTVILQGDKDFRKELIETKILTCNFDV 238
G ++I P ST++NW REF W +++ + KD + + V
Sbjct: 514 GVDRVLIISPLSTVNNWAREFTSWMKFANRNDIEVYDISRYKDKPTRIFKLNEWFNEGGV 573
Query: 239 LITSYEMV----------LKEK------LTLKRFAWEYILIDEAHRIKNEQSALSQVIRL 282
I Y+M L++K L + ++ DE H +KNE++++S+ +
Sbjct: 574 CILGYDMYRILANEKAKGLRKKQREQLMQALVDPGPDLVVCDEGHLLKNEKTSISKAVTR 633
Query: 283 FYSKNRLLITGTPLQNNLHELWALLNFLLPDVFGDSEVFDEWFQQ---NGK-----EEDQ 334
+K R+++TGTPLQNNL E + ++ F+ P++ G + + F NG+ E D
Sbjct: 634 MRTKRRIVLTGTPLQNNLREYYCMIQFVKPNLLGTYKEYMNRFVNPITNGQYTDSTERDL 693
Query: 335 EVVVQQ---LHSVLQPFLLRRVKSEVEKSLLPKKEINLYVGMTDMQIEWYKSLLEKDIDA 391
++ + LH +L+ + RR S + L PK E +Y ++++Q + Y + +
Sbjct: 694 RLMKHRSHILHKLLEGCIQRRDYSVLAPYLPPKHEYVVYTTLSELQQKLYGYYMTTHREQ 753
Query: 392 VNG-AVGKREGKTRLLNIVMQLRKCCNHP 419
G VGK RL LR+ HP
Sbjct: 754 SGGDVVGK---GARLFQDFQDLRRIWTHP 779
>Hs20538502 [R] KOG1016 Predicted DNA helicase DEAD-box superfamily
Length = 1359
Score = 114 bits (286), Expect = 6e-25
Identities = 66/200 (33%), Positives = 108/200 (54%), Gaps = 34/200 (17%)
Query: 440 NSGKMIVLDKLLKKKKEQGSRVLIFSQMSRLLDILEDYC------------------YFR 481
NS KM++L L+++ + G ++L+FSQ L ++E++ + R
Sbjct: 611 NSPKMVLLFHLIEESVKLGDKILVFSQSLSTLALIEEFLGKREVPCPPGTEGQGAQKWVR 670
Query: 482 GYEYCRIDGSTSHDERVEAIDEYNKP-NSEKFIFLLTTRAGGLGINLVTADTVVLYDSDW 540
Y R+DGST ER I+++N P N ++FLL+TRAG LG+NL+ A+ VV++D+ W
Sbjct: 671 NISYFRLDGSTPAFERERLINQFNDPSNLTTWLFLLSTRAGCLGVNLIGANRVVVFDASW 730
Query: 541 NPQADLQAMDRAHRIGQKKQVFVYRFVTENAIEEKVIERAAQKLRLDQLVIQQGTGKKTS 600
NP D QA+ R +R GQKK ++YR V + +E+K+ +R K + V+
Sbjct: 731 NPCHDAQAVCRVYRYGQKKPCYIYRLVADYTLEKKIYDRQISKQGMSDRVV--------- 781
Query: 601 ALTNNKDDLIDMIQFGARDM 620
DDL M+ F +++
Sbjct: 782 ------DDLNPMLNFTRKEV 795
Score = 100 bits (248), Expect = 2e-20
Identities = 104/364 (28%), Positives = 163/364 (44%), Gaps = 89/364 (24%)
Query: 136 LRDYQVYGLNWLI-----SLHESKLSG----ILADEMGLGKTLQSISFLGYLRYIKGIEG 186
++ +Q+ G+ +L SL K S ILA MGLGKTLQ ISF+ L +
Sbjct: 163 VKPHQIGGIRFLYDNLVESLERFKTSSGFGCILAHSMGLGKTLQVISFIDVL-FRHTPAK 221
Query: 187 PYIVIVPKSTLDNWQREFAKWTPEVKTVILQGDKD------FRKELIETKILTC------ 234
+ IVP +TL NW EF W P + + + F+ ++ + T
Sbjct: 222 TVLAIVPVNTLQNWLAEFNMWLPPPEALPADNKPEEVQPRFFKVHILNDEHKTMASRAKV 281
Query: 235 ------NFDVLITSYEM----VLKE-------KLTLKR----------------FAWEY- 260
VL+ YEM LK+ K T KR F E+
Sbjct: 282 MADWVSEGGVLLMGYEMYRLLTLKKSFATGRPKKTKKRSHPVIIDLDEEDRQQEFRREFE 341
Query: 261 ----------ILIDEAHRIKNEQSALSQVIRLFYSKNRLLITGTPLQNNLHELWALLNFL 310
++ DE HRIKN Q++ SQ ++ S+ R+++TG PLQNNL E W +++F+
Sbjct: 342 KALCRPGPDVVICDEGHRIKNCQASTSQALKNIRSRRRVVLTGYPLQNNLIEYWCMVDFV 401
Query: 311 LPDVFGDSEVFDEWFQQ---NGKEED---QEVVVQQ-----LHSVLQPFLLRRVKSEVEK 359
PD G + F F++ NG+ D Q+V + + LHS+L+ F+ RR + ++
Sbjct: 402 RPDFLGTRQEFSNMFERPILNGQCIDSTPQDVRLMRYRSHVLHSLLEGFVQRRGHTVLKI 461
Query: 360 SLLPKKEINLYVGMTDMQIEWYKSLLEKDID-AVNGAVGKREGKTRLLNIVMQLRKCC-- 416
L K+E + V ++ +Q + Y +++ D +G +G LN + CC
Sbjct: 462 HLPAKEENVILVRLSKIQRDLYTQFMDRFRDCGSSGWLG--------LNPLKAFCVCCKI 513
Query: 417 -NHP 419
NHP
Sbjct: 514 WNHP 517
>SPBC582.10c [KL] KOG1001 Helicase-like transcription factor HLTF/DNA helicase
RAD5 DEAD-box superfamily
Length = 830
Score = 114 bits (284), Expect = 1e-24
Identities = 92/330 (27%), Positives = 161/330 (47%), Gaps = 53/330 (16%)
Query: 135 KLRDYQVYGLNWLISLH----ESKLSGILADEMGLGKTLQSISFL--GYLRYIKGIEGPY 188
+L D+QV GL WL S S GILAD+MGLGKT+Q I+ + L K
Sbjct: 232 RLLDHQVQGLTWLKSRETVSKSSASGGILADDMGLGKTIQMIALILSHPLPKKKHSIKST 291
Query: 189 IVIVPKSTLDNWQREFAKWTPEVKTVILQGDKDFRKELIETKILTCNFDVLITSYEMVL- 247
+V+ P S + W+ E + ++ ++ G ++ K++ +DV+IT+Y++++
Sbjct: 292 LVVAPLSLIKQWESE-VQTKSKLTAIVYHGASRYKL----LKVIH-EYDVVITTYQILVS 345
Query: 248 ----------------------KEKLTLKRFAWEYILIDEAHRIKNEQSALSQVIRLFYS 285
K+K +L F W I++DEAH IKN+ S +
Sbjct: 346 EWVSHNTTGTDGKSPTEAKSYEKKKPSLFAFYWWRIILDEAHTIKNKSSKSALACCALQG 405
Query: 286 KNRLLITGTPLQNNLHELWALLNFLLPDVFGDSEVFDEWFQQNGKEEDQEVVVQQLHSVL 345
NR +TGTPLQNN+ EL++L+ FL + F D V+ + + ++ +V ++L +L
Sbjct: 406 INRWCLTGTPLQNNVDELYSLVKFLHINPFNDQSVWKDQISLPLCQGEENLVFKRLRMLL 465
Query: 346 QPFLLRRVKSEVEKS-----------LLPKKEINLYVGMTDMQIEWYKSL---LEKDID- 390
+LRR K+ +E + L + + + + ++Y +L +E+ +
Sbjct: 466 SVIMLRRTKTLLEANAGKDGTGGALKLSKRLVYKVICKFEESERDFYSNLARNMERTMSN 525
Query: 391 -AVNGAVGKREGKTRLLNIVMQLRKCCNHP 419
+G +GK T +L ++++LR+ CNHP
Sbjct: 526 FVNSGKLGK--NYTNILCLLLRLRQACNHP 553
Score = 102 bits (254), Expect = 3e-21
Identities = 63/172 (36%), Positives = 97/172 (55%), Gaps = 5/172 (2%)
Query: 443 KMIVLDKLLKKKKEQGSR-VLIFSQMSRLLDILEDYCYFRGYEYCRIDGSTSHDERVEAI 501
K++ LD+ + +G R +IFSQ + LDI++ + G + R DG ++ R +++
Sbjct: 654 KILSLDEQEEDDTVRGLRKTIIFSQFTTFLDIIDLHLRKAGIGFVRYDGRMNNRAREKSL 713
Query: 502 DEYNKPNSEKFIFLLTTRAGGLGINLVTADTVVLYDSDWNPQADLQAMDRAHRIGQKKQV 561
D + + + L + + G LG+NL A V+L D WNP + QA+DR HRIGQ++ V
Sbjct: 714 DLLRSDSGTQ-VLLCSLKCGALGLNLTCASRVILCDVWWNPAIEEQAIDRVHRIGQRRDV 772
Query: 562 FVYRFVTENAIEEKVIERAAQKLRLDQLVIQQGTGKKTSALTNNKDDLIDMI 613
VY+ V EN IEEK++E Q L+ D G GKK S T+ K L D++
Sbjct: 773 LVYKLVVENTIEEKIVE--LQNLKRDLAKQALGDGKK-SVFTSKKLTLNDLL 821
>7293730 [R] KOG0383 Predicted helicase
Length = 884
Score = 113 bits (282), Expect = 2e-24
Identities = 67/171 (39%), Positives = 96/171 (55%), Gaps = 23/171 (13%)
Query: 128 PSFIKEG---KLRDYQVYGLNWLISLHESKLSGILADEMGLGKTLQSISFLGYLRYIKG- 183
P+F+ EG +L YQ+ G+NWL + ILADEMGLGKT+Q+++FL Y Y +G
Sbjct: 711 PAFL-EGTGMQLHPYQIEGINWLRYSWGQGIDTILADEMGLGKTIQTVTFL-YSLYKEGH 768
Query: 184 IEGPYIVIVPKSTLDNWQREFAKWTPEVKTVILQGDKDFRKELIETKI------------ 231
GP++V VP STL NW+REF W P+ + GDKD R + E ++
Sbjct: 769 CRGPFLVAVPLSTLVNWEREFELWAPDFYCITYIGDKDSRAVIRENELSFEEGAIRGSKV 828
Query: 232 -----LTCNFDVLITSYEMVLKEKLTLKRFAWEYILIDEAHRIKNEQSALS 277
F+VL+TSYE++ + L W +++DEAHR+K+ QS S
Sbjct: 829 SRLRTTQYKFNVLLTSYELISMDAACLGSIDWAVLVVDEAHRLKSNQSKKS 879
>Hs21071060 [B] KOG1000 Chromatin remodeling protein HARP/SMARCAL1 DEAD-box
superfamily
Length = 954
Score = 112 bits (281), Expect = 2e-24
Identities = 118/463 (25%), Positives = 209/463 (44%), Gaps = 58/463 (12%)
Query: 136 LRDYQVYGLNWLISLHESKLSGILADEMGLGKTLQSISFLGYLRYIKGIEGPYIVIVPKS 195
L +Q G+N+ I+ L LAD+MGLGKT+Q+I + R E P +V+VP S
Sbjct: 436 LMPFQRAGVNFAIAKGGRLL---LADDMGLGKTIQAICIAAFYRK----EWPLLVVVPSS 488
Query: 196 TLDNWQREFAKWTPEVK----TVILQGDKDFRKELIETKILTCNFDVLITSYEMVLKEKL 251
W++ F +W P + V++ G LI I S++++ K +
Sbjct: 489 VRFTWEQAFLRWLPSLSPDCINVVVTGKDRLTAGLIN-----------IVSFDLLSKLEK 537
Query: 252 TLKRFAWEYILIDEAHRIKNEQSALSQVIR--LFYSKNRLLITGTPLQNNLHELWALLNF 309
LK ++ ++IDE+H +KN ++A + L +K +L++GTP + EL+ +
Sbjct: 538 QLKT-PFKVVIIDESHFLKNSRTARCRAAMPVLKVAKRVILLSGTPAMSRPAELYTQIIA 596
Query: 310 LLPDVFGDSEVF-----DEWFQQNGKEEDQEVVVQQLHSVL-QPFLLRRVKSEVEKSLLP 363
+ P F F D G + + +L +L + +LRR+KS+V S LP
Sbjct: 597 VKPTFFPQFHAFGLRYCDAKRMPWGWDYSGSSNLGELKLLLEEAVMLRRLKSDV-LSQLP 655
Query: 364 KKEINLYVGMTDMQIEWYKSLLEKDIDAVNGAVGKREGKTRLLNIVMQLRKCCNHPYLFE 423
K+ + V + + A++ A + K + Q +K +
Sbjct: 656 AKQRKIVVIAPG-------RINARTRAALDAAAKEMTTKDK----TKQQQKDALILFFNR 704
Query: 424 GAEPGPPYTTDEHLVFNSGKMIVLDKLLKKKKEQGSRVLIFSQMSRLLDILEDYCYFRGY 483
AE P + +LD LL+ +E + L+F+ +LD + +
Sbjct: 705 TAEAKIPSVIE----------YILD-LLESGRE---KFLVFAHHKVVLDAITQELERKHV 750
Query: 484 EYCRIDGSTSHDERVEAIDEYNKPNSEKFIFLLTTRAGGLGINLVTADTVVLYDSDWNPQ 543
++ RIDGSTS ER + ++ + + + +L+ A +G+ +AD VV + WNP
Sbjct: 751 QHIRIDGSTSSAEREDLCQQF-QLSERHAVAVLSITAANMGLTFSSADLVVFAELFWNPG 809
Query: 544 ADLQAMDRAHRIGQKKQVFVYRFVTENAIEEKVIERAAQKLRL 586
+QA DR HRIGQ V ++ V + ++ + +K+++
Sbjct: 810 VLIQAEDRVHRIGQTSSVGIHYLVAKGTADDYLWPLIQEKIKV 852
>At5g43530 [KL] KOG1001 Helicase-like transcription factor HLTF/DNA helicase
RAD5 DEAD-box superfamily
Length = 1277
Score = 110 bits (276), Expect = 9e-24
Identities = 60/148 (40%), Positives = 94/148 (62%), Gaps = 3/148 (2%)
Query: 441 SGKMIVLDKLLKKKKEQGS--RVLIFSQMSRLLDILEDYCYFRGYEYCRIDGSTSHDERV 498
S K+ L K L+K K+ GS + ++FSQ + LD+LE RG+E+ R DG + R
Sbjct: 1108 SSKVSELLKCLEKIKKSGSGEKSIVFSQWTSFLDLLEIPLRRRGFEFLRFDGKLAQKGRE 1167
Query: 499 EAIDEYNKPNSEKFIFLLTTRAGGLGINLVTADTVVLYDSDWNPQADLQAMDRAHRIGQK 558
+ + E+N+ +K I L++ +AGG+G+NL A +V L D WNP + QA+ R HRIGQK
Sbjct: 1168 KVLKEFNE-TKQKTILLMSLKAGGVGLNLTAASSVFLMDPWWNPAVEEQAIMRIHRIGQK 1226
Query: 559 KQVFVYRFVTENAIEEKVIERAAQKLRL 586
+ VFV RF+ ++ +EE++ + A+K R+
Sbjct: 1227 RTVFVRRFIVKDTVEERMQQVQARKQRM 1254
Score = 88.2 bits (217), Expect = 6e-17
Identities = 84/315 (26%), Positives = 150/315 (46%), Gaps = 60/315 (19%)
Query: 157 GILADEMGLGKTLQSISFL------------------------------GYLRYIKGIEG 186
GILAD MGLGKT+ +I+ + L +K +G
Sbjct: 683 GILADAMGLGKTVMTIALILARPGRGNPENEDVLVADVNADKRNRKEIHMALTTVKA-KG 741
Query: 187 PYIVIVPKSTLDNWQREFAKWT-PEVKTVILQ--GDKDF-RKELIETKILTCNFDVLITS 242
++I P + L W+ E + P+ +V++ GD+ K + ++ + VL ++
Sbjct: 742 GTLIICPMALLSQWKDELETHSKPDTVSVLVYYGGDRTHDAKAIASHDVVLTTYGVLTSA 801
Query: 243 YEMVLKEKLTLKRFAWEYILIDEAHRIKNEQSALSQVIRLFYSKNRLLITGTPLQNNLHE 302
Y+ + + R W I++DEAH IK+ ++ ++ S R +TGTPLQN L +
Sbjct: 802 YKQDMANSI-FHRIDWYRIVLDEAHTIKSWKTQAAKATFELSSHCRWCLTGTPLQNKLED 860
Query: 303 LWALLNFLLPDVFGDSEVFDEWFQQNGKEEDQEVVVQQLHSVLQPFLLRRVKSEVEKSLL 362
L++LL FL + + + + + Q+ + D ++ + ++L+P +LRR K +K
Sbjct: 861 LYSLLCFLHVEPWCNWAWWSKLIQKPYENGDPR-GLKLIKAILRPLMLRRTKETRDK--- 916
Query: 363 PKKEINLYVGMTDMQ-IEWYKSLLEKDIDAVNGAVGKR----------EGK-----TRLL 406
+ + L + TD+Q IE +S E+D A+ KR +GK +L
Sbjct: 917 -EGSLILELPPTDVQVIECEQSEAERDFYT---ALFKRSKVQFDQFVAQGKVLHNYANIL 972
Query: 407 NIVMQLRKCCNHPYL 421
++++LR+CCNHP+L
Sbjct: 973 ELLLRLRQCCNHPFL 987
>At2g21450 [L] KOG0390 DNA repair protein SNF2 family
Length = 816
Score = 110 bits (275), Expect = 1e-23
Identities = 121/539 (22%), Positives = 235/539 (43%), Gaps = 101/539 (18%)
Query: 135 KLRDYQVYGLNWLISLHESKLSG--ILADEMGLGKTLQSISFLGYLRYIKGIEGPYIVIV 192
++R +Q G +L + + G ILA G GKT ISFL + P +V++
Sbjct: 264 EMRPHQTEGFRFLCNNLAADEPGGCILAHAPGSGKTFLLISFLQSFMAMDPQARP-LVVL 322
Query: 193 PKSTLDNWQREFAKWTPEV---------------------------KTVILQGDKDFRKE 225
PK +++W+REF W E ++++ G + F +
Sbjct: 323 PKGIIESWKREFTLWEVEKIPLLDFYSVKAESRKQQLKVLGQWIKERSILFLGYQQFTRI 382
Query: 226 LIETKILTCNFDVLITSYEMVLKEKLTLKRFAWEYILIDEAHRIKNEQSALSQVIRLFYS 285
+ + NF+ +++L EK TL +++DE H +N+++ + + +
Sbjct: 383 ICDD-----NFEAASEDCKLILLEKPTL-------LILDEGHTSRNKETYMLSSLARVKT 430
Query: 286 KNRLLITGTPLQNNLHELWALLNFLLPDVF---GDSEVFDEWFQQ----NGKEEDQ---- 334
+ ++++TGT QNN+ E++ +L+ + P G E+ + GK+ +Q
Sbjct: 431 RRKVVLTGTLFQNNVEEVFNILDLVRPKFLKRPGTREIVSRIMSKAEIPRGKQVNQSSSS 490
Query: 335 ---------EVVVQQLHSVLQPFLLRRVKSEVEKSLLPKKEIN---LYVGMTDMQIEWYK 382
E+ +Q+ + L + E+ +++L + + L G+++ +
Sbjct: 491 IEGTFFAAVELTLQRSTNFSAKASLIKDLREMTRNILHYHKADFSGLLPGLSEFTVMLNL 550
Query: 383 SLLEKDIDAVNGAVGKREGKTRLLNIVMQLRKCCNHPYLFEGAEPGPPYTTDEHLVFNSG 442
S +++D V G K L + + HP L E P ++ N+
Sbjct: 551 SSIQRD--EVKGLRKMELFKQISLGAALYI-----HPKLKSFLEENPS-NGEKGFSDNNT 602
Query: 443 KMIVLDKLLKKK------------------KEQGSRVLIFSQ-------MSRLLDILEDY 477
++ LDK+LKK + G ++L+FSQ + RL+ ++ +
Sbjct: 603 TVMKLDKMLKKINVRDGVKMKFFLNLLALCESTGEKLLVFSQYIVPIKTLERLMSSMKGW 662
Query: 478 CYFRGYEYCRIDGSTSHDERVEAIDEYNKPNSEKFIFLLTTRAGGLGINLVTADTVVLYD 537
G E I G +S+++R +++ +N K +F + +A G GI+LV A V++ D
Sbjct: 663 RL--GKEMFTITGDSSNEQREWSMERFNNSLEAK-VFFGSIKACGEGISLVGASRVLILD 719
Query: 538 SDWNPQADLQAMDRAHRIGQKKQVFVYRFVTENAIEEKVIERAAQKLRLDQLVIQQGTG 596
NP QA+ RA+R GQK++V+ Y+ V ++ EE+ E +K + ++ + G
Sbjct: 720 VHLNPSVTQQAVARAYRPGQKRKVYAYKLVAADSPEEENYETCTRKEMMSKMWFEWNVG 778
>At3g42670 [L] KOG0390 DNA repair protein SNF2 family
Length = 1256
Score = 108 bits (271), Expect = 3e-23
Identities = 122/521 (23%), Positives = 220/521 (41%), Gaps = 93/521 (17%)
Query: 154 KLSG-ILADEMGLGKTLQSISFLG-YLRYIKGIEGPYIVIVPKSTLDNWQREFAKWTPEV 211
K+ G +++ G GKT I+FL YL+ G +V+ PK+TL W +EF KW V
Sbjct: 704 KIGGCVVSHTPGAGKTFLIIAFLASYLKIFPGKRP--LVLAPKTTLYTWYKEFIKWEIPV 761
Query: 212 KTVILQGDKDF---RKELIETK-----------ILTC---------NFDVLITSYEMVLK 248
+L G + + +++ I+ + +L C VL+ Y L
Sbjct: 762 PVHLLHGRRTYCMSKEKTIQFEGIPKPSQDVMHVLDCLDKIQKWHAQPSVLVMGYTSFLT 821
Query: 249 EKLTLKRFAWE------------YILIDEAHRIKNEQSALSQVIRLFYSKNRLLITGTPL 296
+FA +++DE H ++ +S L + + + R+L++GT
Sbjct: 822 LMREDSKFAHRKYMAKVLRESPGLLVLDEGHNPRSTKSRLRKALMKVDTDLRILLSGTLF 881
Query: 297 QNNLHELWALLNFLLPDVFGDSEV-FDEWFQQNGKEEDQEVVVQ-QLHSVLQPFLLRRVK 354
QNN E + L P + V D+ FQ N E+ +++ + + +++
Sbjct: 882 QNNFCEYFNTLCLARPKFVHEVLVELDKKFQTNQAEQKAPHLLENRARKFFLDIIAKKID 941
Query: 355 SEVEKSLLPKKEINLYVGMTDMQIEWYKSLLEKDIDAV----------NGAVGKREGKTR 404
++V L + +N+ MT I+ Y+ D + N + + T+
Sbjct: 942 TKVGDERL--QGLNMLRNMTSGFIDNYEGSGSGSGDVLPGLQIYTLLMNSTDVQHKSLTK 999
Query: 405 LLNIV-----------MQLRKCCNHPYLFEGAEPGPPYTTDEHLVFNSGKMIVLDKLLKK 453
L NI+ + + HP+L + TT FN +++ ++KL K
Sbjct: 1000 LQNIMSTYHGYPLELELLITLAAIHPWLVKT-------TTCCAKFFNPQELLEIEKL-KH 1051
Query: 454 KKEQGSRV-----LIFSQMSR---------------LLDILED-YCYFRGYEYCRIDGST 492
++GS+V L+F + R L++ E+ + + RG E + G
Sbjct: 1052 DAKKGSKVMFVLNLVFRVVKREKILIFCHNIAPIRLFLELFENVFRWKRGRELLTLTGDL 1111
Query: 493 SHDERVEAIDEYNKPNSEKFIFLLTTRAGGLGINLVTADTVVLYDSDWNPQADLQAMDRA 552
ER ID++ +P + + L + A GI+L A V++ DS+WNP QA+ RA
Sbjct: 1112 ELFERGRVIDKFEEPGGQSRVLLASITACAEGISLTAASRVIMLDSEWNPSKTKQAIARA 1171
Query: 553 HRIGQKKQVFVYRFVTENAIEEKVIERAAQKLRLDQLVIQQ 593
R GQ+K V+VY+ ++ +EE R K + ++ +
Sbjct: 1172 FRPGQQKVVYVYQLLSRGTLEEDKYRRTTWKEWVSSMIFSE 1212
>CE27689 [B] KOG1000 Chromatin remodeling protein HARP/SMARCAL1 DEAD-box
superfamily
Length = 689
Score = 108 bits (270), Expect = 4e-23
Identities = 118/509 (23%), Positives = 218/509 (42%), Gaps = 82/509 (16%)
Query: 158 ILADEMGLGKTLQSISFLGYLRYIKGIEGPYIVIVPKSTLDNWQREFAKWTPEVKTV-IL 216
+LADEMGLGK++Q+++ Y + + P +++ P S W+++ + P + + I+
Sbjct: 218 LLADEMGLGKSVQALTIARYYK----ADWPLLIVCPASVKGAWKKQLNTFFPIIHRIFIV 273
Query: 217 QGDKDFRKELIETKILTCNFDVLITSYEMVLKEKLTLKRFAWEYILIDEAHRIKNEQSAL 276
D + + T N +++ +MVLK + LK+ + I+ DE+H +K+ ++
Sbjct: 274 DKSSDPLPD-----VCTSNTVAIMSYEQMVLKHDI-LKKEKYRTIIFDESHMLKDGKARR 327
Query: 277 SQVIRLF--YSKNRLLITGTPLQNNLHELWALLNFLLPDVFGDSEVFDE----------W 324
++V + + +L++GTP + EL+ + + +F + F
Sbjct: 328 TKVATDLSKVALHVILLSGTPALSRPSELFTQIRLIDHKLFTNFHEFAIRYCDGKQGRFC 387
Query: 325 FQQNGKEEDQEVVVQQLHSVLQPFLLRRVKSEVEKSLLPKKEINLYVG-------MTDMQ 377
F+ G +E+ + + ++RR+K++V K L K+ +YV M D+Q
Sbjct: 388 FEAKGCTNSEELAA----IMFKRLMIRRLKADVLKDLPEKRREVVYVSGPTIDARMDDLQ 443
Query: 378 IEWYKSLLEKDIDAVNGAVGKREGKTRLLNI--VMQLRKCCNH---PYLFEGAEPGPPYT 432
D + VN K E ++ +++ C H Y + A P
Sbjct: 444 ------KARADYEKVNSMERKHESLLEFYSLTGIVKAAAVCEHILENYFYPDAPP----- 492
Query: 433 TDEHLVFNSGKMIVLDKLLKKKKEQGSRVLIFSQMSRLLDILEDYCYFRGYEYCRIDGST 492
+VLIF+ +LD ++ R RIDG T
Sbjct: 493 --------------------------RKVLIFAHHQIVLDTIQVEVNKRKLGSIRIDGKT 526
Query: 493 SHDERVEAIDEYNKPNSEKFIFLLTTRAGGLGINLVTADTVVLYDSDWNPQADLQAMDRA 552
R D + ++ + + +L+ A G+GI L A VV + +NP +QA DRA
Sbjct: 527 PSHRRTALCDSFQTDDNIR-VAVLSITAAGVGITLTAASVVVFAEIHFNPGYLVQAEDRA 585
Query: 553 HRIGQKKQVFVYRFVTENAIEEKVIERAAQKLR-LDQLVIQQGTGKKTSALTNNKDDLID 611
HR+GQK VFV + + ++ + QKL L Q+ + T + + + D
Sbjct: 586 HRVGQKDSVFVQYLIAKKTADDVMWNMVQQKLDVLGQVSLSSDTFRTADKMHLRFN---D 642
Query: 612 MIQFGARDMLQHGSGNITVDEDIDEILKK 640
Q G + L+ + + T+DE D + +K
Sbjct: 643 AAQPGIAEYLKK-TPDTTIDEWEDPVEEK 670
>CE27688 [B] KOG1000 Chromatin remodeling protein HARP/SMARCAL1 DEAD-box
superfamily
Length = 687
Score = 108 bits (270), Expect = 4e-23
Identities = 118/509 (23%), Positives = 218/509 (42%), Gaps = 82/509 (16%)
Query: 158 ILADEMGLGKTLQSISFLGYLRYIKGIEGPYIVIVPKSTLDNWQREFAKWTPEVKTV-IL 216
+LADEMGLGK++Q+++ Y + + P +++ P S W+++ + P + + I+
Sbjct: 216 LLADEMGLGKSVQALTIARYYK----ADWPLLIVCPASVKGAWKKQLNTFFPIIHRIFIV 271
Query: 217 QGDKDFRKELIETKILTCNFDVLITSYEMVLKEKLTLKRFAWEYILIDEAHRIKNEQSAL 276
D + + T N +++ +MVLK + LK+ + I+ DE+H +K+ ++
Sbjct: 272 DKSSDPLPD-----VCTSNTVAIMSYEQMVLKHDI-LKKEKYRTIIFDESHMLKDGKARR 325
Query: 277 SQVIRLF--YSKNRLLITGTPLQNNLHELWALLNFLLPDVFGDSEVFDE----------W 324
++V + + +L++GTP + EL+ + + +F + F
Sbjct: 326 TKVATDLSKVALHVILLSGTPALSRPSELFTQIRLIDHKLFTNFHEFAIRYCDGKQGRFC 385
Query: 325 FQQNGKEEDQEVVVQQLHSVLQPFLLRRVKSEVEKSLLPKKEINLYVG-------MTDMQ 377
F+ G +E+ + + ++RR+K++V K L K+ +YV M D+Q
Sbjct: 386 FEAKGCTNSEELAA----IMFKRLMIRRLKADVLKDLPEKRREVVYVSGPTIDARMDDLQ 441
Query: 378 IEWYKSLLEKDIDAVNGAVGKREGKTRLLNI--VMQLRKCCNH---PYLFEGAEPGPPYT 432
D + VN K E ++ +++ C H Y + A P
Sbjct: 442 ------KARADYEKVNSMERKHESLLEFYSLTGIVKAAAVCEHILENYFYPDAPP----- 490
Query: 433 TDEHLVFNSGKMIVLDKLLKKKKEQGSRVLIFSQMSRLLDILEDYCYFRGYEYCRIDGST 492
+VLIF+ +LD ++ R RIDG T
Sbjct: 491 --------------------------RKVLIFAHHQIVLDTIQVEVNKRKLGSIRIDGKT 524
Query: 493 SHDERVEAIDEYNKPNSEKFIFLLTTRAGGLGINLVTADTVVLYDSDWNPQADLQAMDRA 552
R D + ++ + + +L+ A G+GI L A VV + +NP +QA DRA
Sbjct: 525 PSHRRTALCDSFQTDDNIR-VAVLSITAAGVGITLTAASVVVFAEIHFNPGYLVQAEDRA 583
Query: 553 HRIGQKKQVFVYRFVTENAIEEKVIERAAQKLR-LDQLVIQQGTGKKTSALTNNKDDLID 611
HR+GQK VFV + + ++ + QKL L Q+ + T + + + D
Sbjct: 584 HRVGQKDSVFVQYLIAKKTADDVMWNMVQQKLDVLGQVSLSSDTFRTADKMHLRFN---D 640
Query: 612 MIQFGARDMLQHGSGNITVDEDIDEILKK 640
Q G + L+ + + T+DE D + +K
Sbjct: 641 AAQPGIAEYLKK-TPDTTIDEWEDPVEEK 668
>At3g24340 [L] KOG0390 DNA repair protein SNF2 family
Length = 1132
Score = 108 bits (269), Expect = 6e-23
Identities = 122/517 (23%), Positives = 217/517 (41%), Gaps = 89/517 (17%)
Query: 158 ILADEMGLGKTLQSISFLGYLRYIKGIEGPY-IVIVPKSTLDNWQREFAKWTPEV----- 211
I++ + G GKT ++ FL Y+K + +VI P + + W+ E KW +
Sbjct: 613 IISHKAGTGKTRLTVVFLQ--SYLKRFPNSHPMVIAPATLMRTWEDEVRKWNVNIPFYNM 670
Query: 212 KTVILQGDKD-----------FRKELIETKILTCNFDVLITSYEMVLKEKLT-------- 252
++ L G +D + K+++ I L EKL
Sbjct: 671 NSLQLSGYEDAEAVSRLEGNRHHNSIRMVKLVSWWKQKSILGISYPLYEKLAANKNTEGM 730
Query: 253 --LKRFAWEY---ILIDEAHRIKNEQSALSQVIRLFYSKNRLLITGTPLQNNLHELWALL 307
+R E +++DE H +N+ S + +V+ ++ R+ ++GT QNN EL +L
Sbjct: 731 QVFRRMLVELPGLLVLDEGHTPRNQSSLIWKVLTEVRTEKRIFLSGTLFQNNFKELSNVL 790
Query: 308 NFLLPDVFGDSEVFDEWFQQNGK--------EEDQEVVVQQLHSVLQPFLLRRVKSEVEK 359
P D + + K ++E + L +++ F+ + +++
Sbjct: 791 CLARP---ADKDTISSRIHELSKCSQEGEHGRVNEENRIVDLKAMIAHFVHVHEGTILQE 847
Query: 360 SLLPKKEINLYVGMTDMQIEWYKSLLEKDIDAVNGAVGKREGKTRLLNIVMQLRKCCNHP 419
SL ++ + + Q K +L++ ID + E K +++ L CCN
Sbjct: 848 SLPGLRDCVVVLNPPFQQ----KKILDR-IDTSQNTF-EFEHKLSAVSVHPSLYLCCNP- 900
Query: 420 YLFEGAEPGPPYTTDEHLVFNSGKMIVLDKLLKKKKEQG-----------------SRVL 462
T E LV + L K L+ K E+G +VL
Sbjct: 901 ------------TKKEDLVIGPATLGTL-KRLRLKYEEGVKTKFLIDFIRISGTVKEKVL 947
Query: 463 IFSQMSRLLDILEDYC-----YFRGYEYCRIDGSTSHDERVEAIDEYNKPNSEKFIFLLT 517
++SQ L ++ + + G + + G +R ID +NKP+S + L +
Sbjct: 948 VYSQYIDTLKLIMEQLIAECDWTEGEQILLMHGKVEQRDRQHMIDNFNKPDSGSKVLLAS 1007
Query: 518 TRAGGLGINLVTADTVVLYDSDWNPQADLQAMDRAHRIGQKKQVFVYRFVTENAIEEKVI 577
T+A GI+LV A VV+ D WNP + QA+ RA RIGQK+ VF+Y + ++ E
Sbjct: 1008 TKACSEGISLVGASRVVILDVVWNPSVESQAISRAFRIGQKRAVFIYHLMVKDTSEWNKY 1067
Query: 578 ERAAQKLRLDQLVIQQGTGKKTSALTN---NKDDLID 611
+ ++K R+ +LV T +K + N +KD ++D
Sbjct: 1068 CKQSEKHRISELVF-SSTNEKDKPINNEVVSKDRILD 1103
>At1g05480 [L] KOG0390 DNA repair protein SNF2 family
Length = 588
Score = 107 bits (267), Expect = 1e-22
Identities = 101/393 (25%), Positives = 177/393 (44%), Gaps = 51/393 (12%)
Query: 261 ILIDEAHRIKNEQSALSQVIRLFYSKNRLLITGTPLQNNLHELWALLNFLLPDVFG---- 316
+++DEAH +N++S + + + ++ R+L++GTP QNN EL +L P
Sbjct: 186 LVLDEAHTPRNQRSCIWKTLSKVETQKRILLSGTPFQNNFLELCNVLGLARPKYLERLTS 245
Query: 317 ----DSEVFDEWFQQNGKEEDQEVVVQQLHSVLQPFLLRRVKSEVEKSLLPKKEINLYVG 372
+ ++N E +++L +V+ PF+ S ++ SL +E + +
Sbjct: 246 TLKKSGMTVTKRGKKNLGNEINNRGIEELKAVMLPFVHVHKGSILQSSLPGLRECVVVLN 305
Query: 373 MTDMQIEWYKSLLEKDIDAVNGAVGKREGKTRLLNIVMQLRKCCNHPYLFEGAEPGPPYT 432
++Q +S+ E + V + E K L+++ L C +
Sbjct: 306 PPELQRRVLESI-EVTHNRKTKNVFETEHKLSLVSVHPSLVSRCK-------ISEKERLS 357
Query: 433 TDEHLVFNSGKM----------------IVLDKLLKKKKEQGSRVLIFSQMSRLLDILED 476
DE L+ K+ + L +++K+K VL+FSQ L ++
Sbjct: 358 IDEALLAQLKKVRLDPNQSVKTRFLMEFVELCEVIKEK------VLVFSQYIDPLKLIMK 411
Query: 477 YCYFR-----GYEYCRIDGSTSHDERVEAIDEYNKPNSEKFIFLLTTRAGGLGINLVTAD 531
+ R G E + G +R I+E+N P S+ +FL +T+A GI+LV A
Sbjct: 412 HLVSRFKWNPGEEVLYMHGKLEQKQRQTLINEFNDPKSKAKVFLASTKACSEGISLVGAS 471
Query: 532 TVVLYDSDWNPQADLQAMDRAHRIGQKKQVFVYRFVTENAIEEKVIERAAQKLRLDQLVI 591
V+L D WNP + QA+ RA+RIGQK+ V+ Y V + E + AQK R+ +LV
Sbjct: 472 RVILLDVVWNPAVERQAISRAYRIGQKRIVYTYHLVAKGTPEGPKYCKQAQKDRISELVF 531
Query: 592 ------QQGTGKKTSALTNNK--DDLIDMIQFG 616
+G K A+T +K D +++ + G
Sbjct: 532 ACSSRHDKGKEKIAEAVTEDKVLDTMVEHSKLG 564
>CE17477 [R] KOG1016 Predicted DNA helicase DEAD-box superfamily
Length = 1274
Score = 106 bits (264), Expect = 2e-22
Identities = 59/171 (34%), Positives = 98/171 (56%), Gaps = 15/171 (8%)
Query: 435 EHLVFNSGKMIVLDKLLKKKKEQGSRVLIFSQMSRLLDILEDYC--------------YF 480
E ++ N K+++ ++L + + G ++LIFSQ LD+LE+ +
Sbjct: 770 EGVLENGYKIVISLEILDESTQIGEKILIFSQNLTALDMLEEILKKRQIRGKDGPGQRWE 829
Query: 481 RGYEYCRIDGSTSHDERVEAIDEYNKPNSEKFIFLLTTRAGGLGINLVTADTVVLYDSDW 540
+ Y R+DG+TS +R + I+ +N +FL++TRAG LGINLV+A+ ++ D+ W
Sbjct: 830 KNRNYLRLDGTTSGADREKLINRFNSEPGLS-LFLISTRAGSLGINLVSANRCIIIDACW 888
Query: 541 NPQADLQAMDRAHRIGQKKQVFVYRFVTENAIEEKVIERAAQKLRLDQLVI 591
NP D QA+ R +R GQ+K+ FVYR + +N++E + R K L Q V+
Sbjct: 889 NPCHDAQAVCRVYRYGQQKKTFVYRLIMDNSMERSIFNRQISKHGLQQRVV 939
Score = 70.1 bits (170), Expect = 2e-11
Identities = 67/249 (26%), Positives = 116/249 (45%), Gaps = 46/249 (18%)
Query: 193 PKSTLDNWQREFAKWTPEVKTVILQGDKDFRKELIETKILTCNFDVLITSYEMVLKEKLT 252
PK L F+K + E D+ R E +E F+ TS V +E +
Sbjct: 402 PKLNLSGISSGFSKDSSE--------DQKLRDEELE-------FETGFTSGGRVRQEAYS 446
Query: 253 LKRFAW-----EYILIDEAHRIKNEQSALSQVIRLFYSKNRLLITGTPLQNNLHELWALL 307
L R A + ++ DE H+IKN + +S + +K R+++TG PLQNNL E + ++
Sbjct: 447 LIRSALLEPGPDLVVCDEGHKIKNITAEISMTLGAINTKRRIVLTGYPLQNNLLEYFCMI 506
Query: 308 NFLLPDVFGDSEVFDEWFQ---QNGK-----EEDQEVVVQQLH---SVLQPFLLRRVKSE 356
+F+ P G + F + F+ +NG+ +D ++ +Q+ H +++ F+ RR
Sbjct: 507 DFVRPKYLGTRKSFIDRFEKPIKNGQCVDSSPDDVKIALQRTHVLVELVKGFVQRRTHHL 566
Query: 357 VEKSLLPKKEINLYVGMTDMQIEWYKSLL---EKDIDAVNGAVGKREGKTRLLNIVMQLR 413
++K L KE L + + +Q + Y++ + + +I A N AV N +M
Sbjct: 567 LKKILPESKEYVLLLRKSQIQRQLYRNFVLWAKNEIAANNDAV---------FNPLMAFS 617
Query: 414 KCC---NHP 419
C NHP
Sbjct: 618 ACSKIWNHP 626
>Hs17437081 [B] KOG0389 SNF2 family DNA-dependent ATPase
Length = 619
Score = 104 bits (259), Expect = 8e-22
Identities = 49/102 (48%), Positives = 71/102 (69%), Gaps = 2/102 (1%)
Query: 126 QSPSFIKEG-KLRDYQVYGLNWLISLHESKLSGILADEMGLGKTLQSISFLGYLRYIKGI 184
+ PS + + L+ YQ GLNWL +H+ L+GILADEMGLGKT+Q+I+FL YL Y +G
Sbjct: 486 EQPSILNQSLSLKPYQKVGLNWLALVHKHGLNGILADEMGLGKTIQAIAFLAYL-YQEGN 544
Query: 185 EGPYIVIVPKSTLDNWQREFAKWTPEVKTVILQGDKDFRKEL 226
GP++++VP ST+DNW RE W P +K + G ++ RK++
Sbjct: 545 NGPHLIVVPASTIDNWLREVNLWCPTLKVLCYYGSQEERKQI 586
>SPBC23E6.02 [KL] KOG1001 Helicase-like transcription factor HLTF/DNA helicase
RAD5 DEAD-box superfamily
Length = 1040
Score = 102 bits (255), Expect = 2e-21
Identities = 83/325 (25%), Positives = 151/325 (45%), Gaps = 38/325 (11%)
Query: 136 LRDYQVYGLNWLISLHES-KLSGILADEMGLGKTLQSISFLGYLRYIKGIEGPYIVIVPK 194
L ++Q GL WL L ES K GILAD+MGLGKT+Q+++ L ++I P
Sbjct: 390 LMEHQKEGLMWLKRLEESSKKGGILADDMGLGKTVQALALLVTRPPESKSVKTTLIITPV 449
Query: 195 STLDNWQREF-AKWTPEVKTVILQGDKDFRKELIETKILTCNFDVLITSYEMV------- 246
S L W E K P + + +K I ++++ +D+++T+Y ++
Sbjct: 450 SLLQQWHNEILTKIAPSHRPTVYIHHGSSKKHKIAEQLMS--YDIVLTTYNVIAYEFKNK 507
Query: 247 ------LKEKLTLKRFA--------WEYILIDEAHRIKNEQSALSQVIRLFYSKNRLLIT 292
+++ +K+F W +++DEA IKN + ++ L S R ++
Sbjct: 508 MAYDKSIEDNAPIKKFEHLPFFEAEWYRVILDEAQTIKNRNTLAARGCCLLESTYRWCLS 567
Query: 293 GTPLQNNLHELWALLNFLLPDVFGDSEVFDEWFQ-QNGKEEDQEVVVQQLHSVLQPFLLR 351
GTP+QN + E ++L+ FL + D F + F + +++ +L+ LLR
Sbjct: 568 GTPMQNGVEEFYSLIKFLRIKPYSDWSSFSKDFTIPLSSNINTSAPMKRFRGLLKAVLLR 627
Query: 352 RVKS-----EVEKSLLPKKEINLYVGMTDMQIEWYKSL-----LEKDIDAVNGAVGKREG 401
R K+ + +L PK + ++ ++E+Y +L ++ G + G
Sbjct: 628 RTKNTKIDGKPILTLPPKTAVKSETDLSSSEMEFYNTLQSGAQIQMRKYLQEGTITTHYG 687
Query: 402 KTRLLNIVMQLRKCCNHPYLFEGAE 426
LL ++++LR+ C HP+L E
Sbjct: 688 S--LLVLLLRLRQACCHPWLIVARE 710
Score = 89.4 bits (220), Expect = 3e-17
Identities = 64/190 (33%), Positives = 95/190 (49%), Gaps = 7/190 (3%)
Query: 400 EGKTRLLNIVMQLRKCCNHPYLFEGAEPGPPYTTDEHLVFNSGKMIVLDKLLKK--KKEQ 457
+ K R NI L K + + E + G TD S K+ +K+ KK+
Sbjct: 825 DNKLRTENISELLPK--QYSNILENRQMGMKIFTDPKHWTTSTKIEKALNAVKEIIKKQP 882
Query: 458 GSRVLIFSQMSRLLDILEDYCYFRGYEYCRIDGSTSHDERVEAIDEYN-KPNSEKFIFLL 516
++LIFSQ L++ G +Y G S ER +A+ + PN + L+
Sbjct: 883 TDKILIFSQFVSFLELFTVPFRQEGIKYLMYTGGLSTAERNQALINFEVDPNVR--VLLI 940
Query: 517 TTRAGGLGINLVTADTVVLYDSDWNPQADLQAMDRAHRIGQKKQVFVYRFVTENAIEEKV 576
+ +AG +G+NL A+ V++ D WNP + QA+DRAHRIGQ K V + R VT N IEE+V
Sbjct: 941 SLKAGNVGLNLTCANHVIILDPFWNPYIEEQAVDRAHRIGQDKPVNILRIVTNNTIEERV 1000
Query: 577 IERAAQKLRL 586
+ +K L
Sbjct: 1001 LALQDRKREL 1010
>CE17314 [K] KOG1015 Transcription regulator XNP/ATRX DEAD-box superfamily
Length = 1359
Score = 102 bits (254), Expect = 3e-21
Identities = 56/180 (31%), Positives = 96/180 (53%), Gaps = 27/180 (15%)
Query: 441 SGKMIVLDKLLKKKKEQGSRVLIFSQ-------MSRLLDIL------------------- 474
S K+I+L +++KK +E G ++L+FSQ + R+L+ +
Sbjct: 946 SNKLILLVEIIKKCEEIGDKLLVFSQSLESLTLIKRMLEYMAGTGQWFADGHEALNAEGE 1005
Query: 475 EDYCYFRGYEYCRIDGSTSHDERVEAIDEYNKP-NSEKFIFLLTTRAGGLGINLVTADTV 533
E + + G +Y IDGS +R +N P N + L++TRAG LG N+V A+ V
Sbjct: 1006 ETWSWLEGEDYMTIDGSVQSGKRDAVQTSFNDPLNLRARLMLISTRAGSLGTNMVAANRV 1065
Query: 534 VLYDSDWNPQADLQAMDRAHRIGQKKQVFVYRFVTENAIEEKVIERAAQKLRLDQLVIQQ 593
+++D+ WNP D Q++ R +R GQ K V++YRF+ + +EE++ +R K V+ +
Sbjct: 1066 IIFDACWNPSHDTQSLFRVYRFGQTKPVYIYRFIAQGTMEERIYKRQVTKESTSMRVVDE 1125
Score = 93.2 bits (230), Expect = 2e-18
Identities = 88/341 (25%), Positives = 147/341 (42%), Gaps = 63/341 (18%)
Query: 136 LRDYQVYGLNWLISLHESKLS--------GILADEMGLGKTLQSISFLGYLRYIKGIEGP 187
L+ +Q +G+ ++ L GILA MGLGKTLQ I+FL + + I
Sbjct: 463 LKPHQAHGIQFMYDCAFESLDRLDTEGSGGILAHCMGLGKTLQVITFLHTVLMHEKIGEK 522
Query: 188 ---YIVIVPKSTLDNWQREFAKW---------TPEVKTVILQGDKDFRKELIETKILTCN 235
+V+VPK+ + NW +EF KW T +V + + R+ ++ +
Sbjct: 523 CKRVLVVVPKNVIINWFKEFQKWLVDNDEELDTIDVNELDSYKTIEDRRRALKAWHSSKT 582
Query: 236 FDVLITSYEM---------------------VLKEKLTLKRFAW----EYILIDEAHRIK 270
V+I Y++ + K K +++ + ++ DEAH++K
Sbjct: 583 PSVMIIGYDLFRILTVEDDPKKKKPKNRNRRLEKAKEDFRKYLQNPGPDMVVCDEAHKLK 642
Query: 271 NEQSALSQVIRLFYSKNRLLITGTPLQNNLHELWALLNFLLPDVFGDSEVFDEWFQ---Q 327
N+ SALS+ + +K R+ +TGTPLQNNL E ++NF+ P + G F F
Sbjct: 643 NDDSALSKCMVKILTKRRICLTGTPLQNNLMEYHCMVNFVKPGLLGTKTEFANRFVNIIN 702
Query: 328 NGKEEDQEVV--------VQQLHSVLQPFLLRRVKSEVEKSLLPKKEINLYVGMTDMQIE 379
G+ +D + L+ L+ + R+ + +++ PK+E + V T+ Q
Sbjct: 703 RGRTKDASPLEVSFMKRRCHVLYDHLKKCVDRKDYRVLTEAIPPKQEYVINVRQTERQCA 762
Query: 380 WYKSLLEKDIDAVNGAVGKREGKTRLLNIVMQLRKCCNHPY 420
Y + L N VG RLL + HPY
Sbjct: 763 LYNAFL-------NDIVGDSGLSKRLLPDYHMFSRIWTHPY 796
>At5g20420 [L] KOG0390 DNA repair protein SNF2 family
Length = 1261
Score = 101 bits (251), Expect = 7e-21
Identities = 111/501 (22%), Positives = 216/501 (42%), Gaps = 81/501 (16%)
Query: 158 ILADEMGLGKTLQSISFL-GYLRYIKGIEGPYIVIVPKSTLDNWQREFAKWTPEVKTVIL 216
+++ G GKT I+FL YL+ G +V+ PK+TL W +EF KW V ++
Sbjct: 714 VISHSPGAGKTFLIIAFLTSYLKLFPGKRP--LVLAPKTTLYTWYKEFIKWEIPVPVHLI 771
Query: 217 QGDKDF----RKELIETK-----------ILTC---------NFDVLI---TSYEMVLKE 249
G + + + + ++ +L C + VL+ TS+ +++E
Sbjct: 772 HGRRTYCTFKQNKTVQFNGVPKPSRDVMHVLDCLEKIQKWHAHPSVLVMGYTSFTTLMRE 831
Query: 250 --KLTLKRFAWEYI-------LIDEAHRIKNEQSALSQVIRLFYSKNRLLITGTPLQNNL 300
K +++ + + ++DE H ++ +S L + + + R+L++GT QNN
Sbjct: 832 DSKFAHRKYMAKVLRESPGLLVLDEGHNPRSTKSRLRKALMKVGTDLRILLSGTLFQNNF 891
Query: 301 HELWALLNFLLPDVFGDSEV-FDEWFQQN-GKEEDQEVVVQQLHSVLQPFLLRRVKSEVE 358
E + L P + + D+ F+ N G + ++ + + + +++ + V
Sbjct: 892 CEYFNTLCLARPKFIHEVLMELDQKFKTNHGVNKAPHLLENRARKLFLDIIAKKIDASVG 951
Query: 359 KSLLPKKEINLYVGMTDMQIEWYKSLLEKDIDAV----------NGAVGKREGKTRLLNI 408
L + +N+ MT+ I+ Y+ DA+ N + + T+L ++
Sbjct: 952 DERL--QGLNMLKNMTNGFIDNYEGSGSGSGDALPGLQIYTLVMNSTDIQHKILTKLQDV 1009
Query: 409 V-----------MQLRKCCNHPYLFEGAEPGPPYTTDEHLVF----------NSGKMIVL 447
+ +Q+ HP+L + + + L S M VL
Sbjct: 1010 IKTYFGYPLEVELQITLAAIHPWLVTSSNCCTKFFNPQELSEIGKLKHDAKKGSKVMFVL 1069
Query: 448 DKLLKKKKEQGSRVLIF----SQMSRLLDILED-YCYFRGYEYCRIDGSTSHDERVEAID 502
+ + + K + ++LIF + + ++ E+ + + RG E + G ER ID
Sbjct: 1070 NLIFRVVKRE--KILIFCHNIAPIRMFTELFENIFRWQRGREILTLTGDLELFERGRVID 1127
Query: 503 EYNKPNSEKFIFLLTTRAGGLGINLVTADTVVLYDSDWNPQADLQAMDRAHRIGQKKQVF 562
++ +P + + L + A GI+L A V++ DS+WNP QA+ RA R GQ+K V+
Sbjct: 1128 KFEEPGNPSRVLLASITACAEGISLTAASRVIMLDSEWNPSKTKQAIARAFRPGQQKVVY 1187
Query: 563 VYRFVTENAIEEKVIERAAQK 583
VY+ ++ +EE R K
Sbjct: 1188 VYQLLSRGTLEEDKYRRTTWK 1208
>CE14110 [KL] KOG4439 RNA polymerase II transcription termination factor
TTF2/lodestar DEAD-box superfamily
Length = 1026
Score = 100 bits (250), Expect = 9e-21
Identities = 57/186 (30%), Positives = 102/186 (54%), Gaps = 8/186 (4%)
Query: 426 EPGPPYTTDEHLVFNSGKMIVLDKLLKKKKEQGSRVLIFSQMSRLLDILEDYCYFRGYEY 485
EP P T F S KM +++++ E+ +V+I SQ + +L+++E + G+ Y
Sbjct: 824 EPKQPPTRIFEPDFISCKMAKTLEVVREILEKKEKVVIVSQWTSVLNLVEKHIQAGGHNY 883
Query: 486 CRIDGSTSHDERVEAIDEYNKPNSEKFIFLLTTRAGGLGINLVTADTVVLYDSDWNPQAD 545
I G +R E +D +N+ + LL+ AGG+G+NL+ + +++ D WNP +
Sbjct: 884 TSITGQVLVKDRQERVDSFNQEKGGAQVMLLSLTAGGVGLNLIGGNHLIMVDLHWNPALE 943
Query: 546 LQAMDRAHRIGQKKQVFVY--------RFVTENAIEEKVIERAAQKLRLDQLVIQQGTGK 597
QA DR +R+GQKK+VF++ R + + IE++V++ +KL L V++ +
Sbjct: 944 QQACDRIYRMGQKKEVFIHRLNISKFCRLIVKGTIEQRVMDLQEKKLALAASVLEGTATR 1003
Query: 598 KTSALT 603
K + LT
Sbjct: 1004 KLNKLT 1009
Score = 88.6 bits (218), Expect = 5e-17
Identities = 89/335 (26%), Positives = 146/335 (43%), Gaps = 74/335 (22%)
Query: 135 KLRDYQVYGLNWLISLHESKLSG-ILADEMGLGKTLQSISFLGYL--------------- 178
+L +Q GL WL+ SG ILAD+MGLGKTL +S + +
Sbjct: 388 ELMPHQKAGLRWLVWREGQPHSGGILADDMGLGKTLSMLSLIVHQKAARRARKESGDNAA 447
Query: 179 ----RYIKGIEGPY-----IVIVPKSTLDNWQREFAKWTPE--VKTVILQGDKDFRKELI 227
R + EG Y ++I P S + W+ E + + + G K R+ I
Sbjct: 448 DKEKRRVAKEEGLYPSNGTLIIAPASLIHQWEAEINRRLESDLLSVFMFHGTKKQRQ--I 505
Query: 228 ETKILTCNFDVLITSYEMVLKEKLTLK--------------------------------R 255
E K L +DV+IT+Y + E + K R
Sbjct: 506 EPKELA-RYDVVITTYTLAANELMEKKAAGSKKEEDSDDESENEENPRRPAGKNDSPLAR 564
Query: 256 FAWEYILIDEAHRIKNEQSALSQVIRLFYSKNRLLITGTPLQNNLHELWALLNFLLPDVF 315
AW +++DEAH IKN S S+ + S +R ++GTP+ NNL +L++L+ FL +F
Sbjct: 565 VAWSRVILDEAHAIKNRLSQCSKAVCRLSSFSRWCLSGTPIHNNLWDLYSLVRFLRIPLF 624
Query: 316 GDSEVFDEWFQQNGKEEDQEVVVQQLHSVLQPFLLRRVKSEVEKSLLPKKEINLYVGMTD 375
GD + + E + + +++ + + +LRR K + + +L KK +NL +
Sbjct: 625 GDRKFWAESIMPM-----KTGMADRVNLLTKNLMLRRTKDQ-QCALTNKKIVNL----KE 674
Query: 376 MQIEWYKSLLEKDIDAVNGAVGKREGKTRLLNIVM 410
+IE ++ LE D NG E +L+ ++
Sbjct: 675 KKIEIHE--LEMVGDEANGYAIMMEAAQKLVKQIV 707
>At5g05130 [KL] KOG1001 Helicase-like transcription factor HLTF/DNA helicase
RAD5 DEAD-box superfamily
Length = 881
Score = 99.8 bits (247), Expect = 2e-20
Identities = 59/170 (34%), Positives = 93/170 (54%), Gaps = 8/170 (4%)
Query: 425 AEPGPPYTT-----DEHLVFNSGKMIVLDKLLKKKKEQG--SRVLIFSQMSRLLDILEDY 477
A P PP ++ D S K+ L LL +++ ++ ++FSQ ++L +LE
Sbjct: 685 APPPPPDSSNTDGEDAKSSTKSSKVSALLSLLMASRQENPNTKSVVFSQFRKMLLLLETP 744
Query: 478 CYFRGYEYCRIDGSTSHDERVEAIDEYNKPN-SEKFIFLLTTRAGGLGINLVTADTVVLY 536
G+ R+DG+ + +R + I E+ P + + L + +A G GINL A V L+
Sbjct: 745 LKAAGFTILRLDGAMTVKKRTQVIGEFGNPELTGPVVLLASLKASGTGINLTAASRVYLF 804
Query: 537 DSDWNPQADLQAMDRAHRIGQKKQVFVYRFVTENAIEEKVIERAAQKLRL 586
D WNP + QAMDR HRIGQK++V + R + N+IEE+V+E +K L
Sbjct: 805 DPWWNPAVEEQAMDRIHRIGQKQEVKMIRMIARNSIEERVLELQQKKKNL 854
Score = 70.1 bits (170), Expect = 2e-11
Identities = 53/237 (22%), Positives = 112/237 (46%), Gaps = 13/237 (5%)
Query: 189 IVIVPKSTLDNWQREFAKWT-PEVKTVILQGDKDFRKELIETKILTCNFDVLITSYEMVL 247
+++ P S + W + + T P + V + + ++ E +D+++T+Y +
Sbjct: 361 LIVCPPSVISAWITQLEEHTVPGILKVYMYHGGERTDDVNELM----KYDIVLTTYGTLA 416
Query: 248 KEKL----TLKRFAWEYILIDEAHRIKNEQSALSQVIRLFYSKNRLLITGTPLQNNLHEL 303
E+ +K+ W I++DEAH IKN + S+V+ + R +TGTP+QN +L
Sbjct: 417 VEESWEDSPVKKMEWLRIILDEAHTIKNANAQQSRVVCKLKASRRWAVTGTPIQNGSFDL 476
Query: 304 WALLNFLLPDVFGDSEVFDEWFQQNGKEEDQEVVVQQLHSVLQPFLLRRVKSEVEKSLLP 363
++L+ FL + F + Q+ + +++ + +L ++ LRR K + L P
Sbjct: 477 YSLMAFLRFEPFSIKSYWQSLIQRPLGQGNKK-GLSRLQVLMATISLRRTKEKSLIGLPP 535
Query: 364 KKEINLYVGMTDMQIEWYKSLLEKDIDAVNGAVGK---REGKTRLLNIVMQLRKCCN 417
K YV ++ + + Y + + V + + +L+I+++LR+ C+
Sbjct: 536 KTVETCYVELSPEERQLYDHMEGEAKGVVQNLINNGSLMRNYSTVLSIILRLRQLCD 592
>SPAC17A2.12 [KL] KOG1001 Helicase-like transcription factor HLTF/DNA helicase
RAD5 DEAD-box superfamily
Length = 897
Score = 97.8 bits (242), Expect = 8e-20
Identities = 51/171 (29%), Positives = 100/171 (57%), Gaps = 6/171 (3%)
Query: 440 NSGKMIVLDKLLKKKKEQGSRVLIFSQMSRLLDILEDYCYFRGYEYCRIDGSTSHDERVE 499
N + +LD + K+ E ++L++SQ S+ L ++ + R DG+ S ++R +
Sbjct: 726 NQARQTILDIIGSKRNE---KILVYSQFSQYLCLVSHMLKLENIRHVRYDGTMSANQRQK 782
Query: 500 AIDEYNKPNSEKFIFLLTTRAGGLGINLVTADTVVLYDSDWNPQADLQAMDRAHRIGQKK 559
++ +N + + + L++ +AG +G+NL A+ V+L + +NP + QA+DR HR+GQ+K
Sbjct: 783 SLHSFNN-DKDVLVMLVSLKAGSVGLNLTIANHVILQEPFYNPSIEDQAIDRVHRLGQQK 841
Query: 560 QVFVYRFVTENAIEEKVIERAAQKLRLDQLVIQQGTGKKTSALTNNKDDLI 610
V VYRF+T++ IEE+++ +K +L + + S L +K++L+
Sbjct: 842 PVTVYRFITKDTIEERIVSVQRKKRQLVKEALDSNENNPLSRL--DKEELL 890
Score = 90.5 bits (223), Expect = 1e-17
Identities = 81/322 (25%), Positives = 148/322 (45%), Gaps = 34/322 (10%)
Query: 136 LRDYQVYGLNWLISLHES-KLSGILADEMGLGKTLQSISFLGYLRYIKGIEGPYIVIVPK 194
L +QV G W+ S+ +S K G++AD+MGLGKT+Q+I+ L + + +++V
Sbjct: 250 LLPHQVEGHAWMESMEQSSKCGGVMADDMGLGKTIQTIALLLTQKSQDPLRKTNLIVVSV 309
Query: 195 STLDNWQREFA-KWTPEVKTVILQGDKDFRKELIETKILTCNFDVLITSYEMVLKEK--- 250
+ L W E + K P K + +K L ++ +DV++T+Y M+ E
Sbjct: 310 ALLHQWAEELSTKVHPSKKLSVYIHHGSTKKNLDSYEL--SQYDVVLTTYSMLAYEMKQN 367
Query: 251 ----------------LTLKRFAWEYILIDEAHRIKNEQSALSQVIRLFYSKNRLLITGT 294
+L +W I++DEAH I+N + ++ +K R ++GT
Sbjct: 368 DAFNNNNPATATPPPACSLLETSWYRIVLDEAHTIRNRDTLAAKCCVKLDAKYRWCLSGT 427
Query: 295 PLQNNLHELWALLNFLLPDVFGDSEVFDEWFQQNGKEEDQEVV---VQQLHSVLQPFLLR 351
P+QN++ E ++LL FL + +F + + K ++V +++L +L + R
Sbjct: 428 PIQNHIDEFYSLLKFLRIKPYCVWSLFAKDISRPLKSYRADIVEAALKRLRILLASTVFR 487
Query: 352 RVKSEVEKSL----LPKKEI-NLYVGMTDMQIEWYKSLLEKDIDAVNGAVGKREGKTR-- 404
R K +L LP K I + V + + Y + V+ +R
Sbjct: 488 RTKETRVNNLPIVNLPPKTIRTVSVNLLPEERALYNEQMSSAQSLVDNYFNNDHDLSRYG 547
Query: 405 -LLNIVMQLRKCCNHPYLFEGA 425
LL +++LR+ C HP+L + +
Sbjct: 548 FLLVSLLRLRQFCCHPWLVKSS 569
>At5g22750 [KL] KOG1001 Helicase-like transcription factor HLTF/DNA helicase
RAD5 DEAD-box superfamily
Length = 1029
Score = 97.4 bits (241), Expect = 1e-19
Identities = 87/331 (26%), Positives = 157/331 (47%), Gaps = 73/331 (22%)
Query: 157 GILADEMGLGKTLQSIS-----------------------------------------FL 175
GILAD MGLGKT+ +IS FL
Sbjct: 415 GILADAMGLGKTVMTISLLLAHSWKAASTGFLCPNYEGDKVISSSVDDLTSPPVKATKFL 474
Query: 176 GYLRYI---KGI--EGPYIVIVPKSTLDNWQREFAKWT-PEVKTVILQGDKDFRKELIET 229
G+ + + K + G +++ P + L W+ E P +V + + K+
Sbjct: 475 GFDKRLLEQKSVLQNGGNLIVCPMTLLGQWKTEIEMHAKPGSLSVYVHYGQSRPKD---A 531
Query: 230 KILTCNFDVLITSYEMVLKEKLT--------LKRFAWEYILIDEAHRIKNEQSALSQVIR 281
K+L+ + DV+IT+Y ++ E + W I++DEAH IKN +S +S
Sbjct: 532 KLLSQS-DVVITTYGVLTSEFSQENSADHEGIYAVRWFRIVLDEAHTIKNSKSQISLAAA 590
Query: 282 LFYSKNRLLITGTPLQNNLHELWALLNFLLPDVFGDSEVFDEWFQQNGKEEDQEVVVQQL 341
+ R +TGTP+QNNL +L++LL FL + +G +++ Q+ +E D E ++ +
Sbjct: 591 ALVADRRWCLTGTPIQNNLEDLYSLLRFLRIEPWGTWAWWNKLVQKPFEEGD-ERGLKLV 649
Query: 342 HSVLQPFLLRRVKSEVEKS-----LLPKKEIN-LYVGMTDMQIEWYKSLLEKDIDAVNGA 395
S+L+P +LRR KS ++ +LP + +Y +++ + ++Y +L ++ +
Sbjct: 650 QSILKPIMLRRTKSSTDREGRPILVLPPADARVIYCELSESERDFYDALFKRSKVKFDQF 709
Query: 396 VGKREGK-----TRLLNIVMQLRKCCNHPYL 421
V +GK +L ++++LR+CC+HP+L
Sbjct: 710 V--EQGKVLHNYASILELLLRLRQCCDHPFL 738
Score = 95.5 bits (236), Expect = 4e-19
Identities = 49/146 (33%), Positives = 86/146 (58%), Gaps = 1/146 (0%)
Query: 441 SGKMIVLDKLLKKKKEQGSRVLIFSQMSRLLDILEDYCYFRGYEYCRIDGSTSHDERVEA 500
S K+ L + L+ + GS+ ++FSQ + LD+L+ + + R+DG+ S +R +
Sbjct: 862 SSKITALLEELEGLRSSGSKSILFSQWTAFLDLLQIPLSRNNFSFVRLDGTLSQQQREKV 921
Query: 501 IDEYNKPNSEKFIFLLTTRAGGLGINLVTADTVVLYDSDWNPQADLQAMDRAHRIGQKKQ 560
+ E+++ S + L++ +AGG+GINL A + D WNP + QA+ R HRIGQ K+
Sbjct: 922 LKEFSEDGSI-LVLLMSLKAGGVGINLTAASNAFVMDPWWNPAVEEQAVMRIHRIGQTKE 980
Query: 561 VFVYRFVTENAIEEKVIERAAQKLRL 586
V + RF+ + +EE++ A+K R+
Sbjct: 981 VKIRRFIVKGTVEERMEAVQARKQRM 1006
>Hs21071052 [KL] KOG1001 Helicase-like transcription factor HLTF/DNA helicase
RAD5 DEAD-box superfamily
Length = 1009
Score = 94.7 bits (234), Expect = 7e-19
Identities = 48/135 (35%), Positives = 80/135 (58%), Gaps = 1/135 (0%)
Query: 453 KKKEQGSRVLIFSQMSRLLDILEDYCYFRGYEYCRIDGSTSHDERVEAIDEY-NKPNSEK 511
+KK + L+ SQ + L ++E G+ + R+DGS + +RVE+I + N
Sbjct: 846 RKKNPNIKSLVVSQFTTFLSLIEIPLKASGFVFTRLDGSMAQKKRVESIQCFQNTEAGSP 905
Query: 512 FIFLLTTRAGGLGINLVTADTVVLYDSDWNPQADLQAMDRAHRIGQKKQVFVYRFVTENA 571
I LL+ +AGG+G+NL A V L D WNP A+ Q DR HR+GQK++V + +F+ +++
Sbjct: 906 TIMLLSLKAGGVGLNLSAASRVFLMDPAWNPAAEDQCFDRCHRLGQKQEVIITKFIVKDS 965
Query: 572 IEEKVIERAAQKLRL 586
+EE +++ +K L
Sbjct: 966 VEENMLKIQNKKREL 980
Score = 82.8 bits (203), Expect = 3e-15
Identities = 67/255 (26%), Positives = 129/255 (50%), Gaps = 26/255 (10%)
Query: 189 IVIVPKSTLDNWQREFAKWTPEVKT-VILQGDKDFRKELIETKILTCNFDVLITSYEMVL 247
++I P S L NW +F + +K+ V L + + I L D+++T+Y ++
Sbjct: 479 LIICPLSVLSNWIDQFGQ---HIKSDVHLNFYVYYGPDRIREPALLSKQDIVLTTYNILT 535
Query: 248 KEKLT-----LKRFAWEYILIDEAHRIKNEQSALSQVIRLFYSKNRLLITGTPLQNNLHE 302
+ T L W +++DE H I+N + ++ + S+ R ++TGTP+QN+L +
Sbjct: 536 HDYGTKGDSPLHSIRWLRVILDEGHAIRNPNAQQTKAVLDLESERRWVLTGTPIQNSLKD 595
Query: 303 LWALLNFLLPDVFGDSEVFDEWFQQNGKEEDQEVVVQQLHSVLQPFLLRRVKSEVEKSL- 361
LW+LL+FL F D E + Q+ D E +++L S+++ LRR K+ K
Sbjct: 596 LWSLLSFLKLKPFIDREWWHRTIQRPVTMGD-EGGLRRLQSLIKNITLRRTKTSKIKGKP 654
Query: 362 ---LPKKEINL-YVGMTDMQIEWYKSLLEKDIDAVNGAVGK--REGK-----TRLLNIVM 410
LP++++ + ++ ++D + + Y+S+ + +G+ EG +L +++
Sbjct: 655 VLELPERKVFIQHITLSDEERKIYQSVKNEG----RATIGRYFNEGTVLAHYADVLGLLL 710
Query: 411 QLRKCCNHPYLFEGA 425
+LR+ C H YL A
Sbjct: 711 RLRQICCHTYLLTNA 725
>At2g16390 [L] KOG0390 DNA repair protein SNF2 family
Length = 888
Score = 94.4 bits (233), Expect = 9e-19
Identities = 122/501 (24%), Positives = 207/501 (40%), Gaps = 78/501 (15%)
Query: 135 KLRDYQVYGLNWLISLHESKLSG--ILADEMGLGKTLQSISFLGYLRYIKGIEGPYIVIV 192
+++ +Q+ G +L S + G I+A G GKT ISF+ K + +V++
Sbjct: 349 EMKPHQIEGFQFLCSNLVADDPGGCIMAHAPGSGKTFMIISFMQSF-LAKYPQAKPLVVL 407
Query: 193 PKSTLDNWQREFAKWTPE---------VKTVILQGDKDFRKELIETK-ILTCNFDVLITS 242
PK L W++EF +W E K K+ +E K IL + T
Sbjct: 408 PKGILPTWKKEFVRWQVEDIPLLDFYSAKAENRAQQLSILKQWMEKKSILFLGYQQFSTI 467
Query: 243 YEMVLKEKLTLKRFAWEY---ILIDEAHRIKNEQSALSQVIRLFYSKNRLLITGTPLQNN 299
+ L+ + + +++DE H +NE + L Q + + +++++GT QN+
Sbjct: 468 VCDDTTDSLSCQEILLKVPSILILDEGHTPRNEDTNLLQSLAQVQTPRKVVLSGTLYQNH 527
Query: 300 LHELWALLNFLLP---------------------DVFGD--------SEVFDEWFQQN-G 329
+ E++ +LN + P DV G + +F+E +
Sbjct: 528 VKEVFNILNLVRPKFLKLDTSKSAVKRILAYTPCDVRGRLTGSNSDMASMFNETVEHTLQ 587
Query: 330 KEEDQEV---VVQQLHSVLQPFLLRRVKSEVEKSLLPKKEINLYVGMTDMQIEWYKSLLE 386
K ED V V+Q L + + +L K + L + + + ++ Q+ K L
Sbjct: 588 KSEDFTVKIKVIQDLREMTKK-VLHYYKGDFLDELPGLADFTVVLNLSPKQLNEVKKLRR 646
Query: 387 KDIDAVNGAVGKREGKTRLLNIVMQLRKCCNHPYL--FEGAEPGPPYTTDEHLV----FN 440
+ KR+ K + + L HP L F TT + +V N
Sbjct: 647 E----------KRKFKVSAVGSAIYL-----HPKLKVFSDKSDDVSDTTMDEMVEKLDLN 691
Query: 441 SG-KMIVLDKLLKKKKEQGSRVLIFSQMSRLLDILEDYCYFR-----GYEYCRIDGSTSH 494
G K L+ G ++L+FSQ L LE G E + G+TS
Sbjct: 692 EGVKAKFFLNLINLCDSAGEKLLVFSQYLIPLKFLERLAALAKGWKLGKEVFVLTGNTSS 751
Query: 495 DERVEAIDEYNKPNSEKFIFLLTTRAGGLGINLVTADTVVLYDSDWNPQADLQAMDRAHR 554
++R +++ +N K IF + +A G GI+LV A +++ D NP QA+ RA R
Sbjct: 752 EQREWSMETFNSSPDAK-IFFGSIKACGEGISLVGASRILILDVPLNPSVTRQAIGRAFR 810
Query: 555 IGQKKQVFVYRFVTENAIEEK 575
GQKK V YR + ++ EE+
Sbjct: 811 PGQKKMVHAYRLIAGSSPEEE 831
>7291744 [R] KOG1016 Predicted DNA helicase DEAD-box superfamily
Length = 1534
Score = 93.6 bits (231), Expect = 1e-18
Identities = 87/313 (27%), Positives = 138/313 (43%), Gaps = 65/313 (20%)
Query: 136 LRDYQVYGLNWLI------SLHESKLSG---ILADEMGLGKTLQSISFLG-YLRYIKGIE 185
++ +Q+ G+ +L + +K SG ILA MGLGKTLQ +SF +LR+
Sbjct: 384 IKPHQIGGVRFLYDNIIESTRRYNKSSGFGCILAHSMGLGKTLQVVSFCDIFLRHTSA-- 441
Query: 186 GPYIVIVPKSTLDNWQREFAKWTPEVKTVILQGDKDF--------RKELIETKILTCNF- 236
+ ++P +TL NW EF W P T ++F +K L + N+
Sbjct: 442 KTVLCVMPINTLQNWLSEFNMWIPRYSTDSNVRPRNFDIFVLNDQQKTLTARAKVILNWV 501
Query: 237 ---DVLITSYEM----VLKEKLTLKRFAW--------------------------EYILI 263
VL+ YE+ LK T KR + ++
Sbjct: 502 HDGGVLLIGYELFRLLALKLVKTRKRKGSVIRPDGMDSSSDLMNLVYEALVKPGPDLVIC 561
Query: 264 DEAHRIKNEQSALSQVIRLFYSKNRLLITGTPLQNNLHELWALLNFLLPDVFGDSEVFDE 323
DE HRIKN + +S ++ ++ R+++TG PLQNNL E W +++F+ P+ G F
Sbjct: 562 DEGHRIKNSHAGISLALKEIRTRRRIVLTGYPLQNNLLEYWCMVDFVRPNYLGTRTEFCN 621
Query: 324 WFQ---QNGKEED--------QEVVVQQLHSVLQPFLLRRVKSEVEKSLLPKKEINLYVG 372
F+ QNG+ D LHS+L F+ RR + ++ +L K E + V
Sbjct: 622 MFERPIQNGQCVDSTPDDIKLMRYRAHVLHSLLLGFVQRRSHTVLQLTLPQKYEYVILVK 681
Query: 373 MTDMQIEWYKSLL 385
MT Q + Y + +
Sbjct: 682 MTAFQRKLYDTFM 694
>At3g20010 [KL] KOG1001 Helicase-like transcription factor HLTF/DNA helicase
RAD5 DEAD-box superfamily
Length = 1047
Score = 92.0 bits (227), Expect = 4e-18
Identities = 50/136 (36%), Positives = 83/136 (60%), Gaps = 2/136 (1%)
Query: 449 KLLKKKKEQGS-RVLIFSQMSRLLDILEDYCYFRGYEYCRIDGSTSHDERVEAIDEYNKP 507
+L QG+ + +IFSQ + +LD++E G E+ R+DG+ S R A+ E++K
Sbjct: 882 RLHSSSPSQGAVKTIIFSQWTGMLDLVELRILESGIEFRRLDGTMSLAARDRAVKEFSKK 941
Query: 508 NSEKFIFLLTTRAGGLGINLVTADTVVLYDSDWNPQADLQAMDRAHRIGQKKQVFVYRFV 567
K + L++ +AG LG+N+V A V+L D WNP + QA+DRAHRIGQ + V V R
Sbjct: 942 PDVK-VMLMSLKAGNLGLNMVAACHVILLDLWWNPTTEDQAIDRAHRIGQTRPVTVTRIT 1000
Query: 568 TENAIEEKVIERAAQK 583
++ +E+++++ +K
Sbjct: 1001 IKDTVEDRILKLQEEK 1016
Score = 60.1 bits (144), Expect = 2e-08
Identities = 47/185 (25%), Positives = 86/185 (46%), Gaps = 9/185 (4%)
Query: 253 LKRFAWEYILIDEAHRIKNEQSALSQVIRLFYSKNRLLITGTPLQNNLHELWALLNFLLP 312
L + W I++DEA IKN ++ +++ +K R ++GTP+QN + +L++ FL
Sbjct: 537 LGKVGWFRIVLDEAQTIKNYRTQMARSCCTLRAKRRWCLSGTPIQNTIDDLYSYFRFLRY 596
Query: 313 DVFGDSEVFDEWFQQNGKEEDQEVVVQQLHSVLQPFLLRRVKSEVEKSL----LPKKEIN 368
D + + F + + ++L +VL+ +LRR K + LP K +N
Sbjct: 597 DPYAVYKSFYSTIKVPISRNSCQ-GYKKLQAVLRAIMLRRTKGTLLDGKPIINLPPKVVN 655
Query: 369 L-YVGMTDMQIEWYKSL---LEKDIDAVNGAVGKREGKTRLLNIVMQLRKCCNHPYLFEG 424
L V + + +YK L A A + +L ++++LR+ C+HP L +
Sbjct: 656 LSQVDFSVAERSFYKKLEADSRSQFKAYADAGTLSQNYANILLLLLRLRQACDHPQLVKR 715
Query: 425 AEPGP 429
P
Sbjct: 716 YNSDP 720
>YBR114w [L] KOG1002 Nucleotide excision repair protein RAD16
Length = 790
Score = 90.1 bits (222), Expect = 2e-17
Identities = 61/195 (31%), Positives = 102/195 (52%), Gaps = 28/195 (14%)
Query: 135 KLRDYQVYGLNWLISLHESKLSG-ILADEMGLGKTLQSISFLGYLRYIKGIEGPYIVIVP 193
KL +Q+ GL+WLIS ES +G +LADEMG+GKT+Q+I+ L + P +V+ P
Sbjct: 183 KLLPFQLEGLHWLISQEESIYAGGVLADEMGMGKTIQTIALL----MNDLTKSPSLVVAP 238
Query: 194 KSTLDNWQREFAKWTP-EVKTVILQGDKDFRKELIETKILTCNFDVLITSYEMV------ 246
L W+ E + T ++K I G + K L +DV++T+Y ++
Sbjct: 239 TVALMQWKNEIEQHTKGQLKIYIYHG----ASRTTDIKDLQ-GYDVVLTTYAVLESVFRK 293
Query: 247 -----------LKEKLTLKRFAWEYILIDEAHRIKNEQSALSQVIRLFYSKNRLLITGTP 295
K+ L + +++DEAH IK+ QS ++ + ++ R ++GTP
Sbjct: 294 QNYGFRRKNGLFKQPSVLHNIDFYRVILDEAHNIKDRQSNTARAVNNLKTQKRWCLSGTP 353
Query: 296 LQNNLHELWALLNFL 310
LQN + E+++L+ FL
Sbjct: 354 LQNRIGEMYSLIRFL 368
Score = 88.2 bits (217), Expect = 6e-17
Identities = 49/149 (32%), Positives = 87/149 (57%), Gaps = 2/149 (1%)
Query: 446 VLDKLLKKKKEQGS-RVLIFSQMSRLLDILEDYCYFRGYEYCRIDGSTSHDERVEAIDEY 504
++++L K + + + + ++FSQ + +LD++E G++ ++ GS S +R E I +Y
Sbjct: 624 LVEELYKLRSNKRTIKSIVFSQFTSMLDLVEWRLKRAGFQTVKLQGSMSPTQRDETI-KY 682
Query: 505 NKPNSEKFIFLLTTRAGGLGINLVTADTVVLYDSDWNPQADLQAMDRAHRIGQKKQVFVY 564
N + +FL++ +AGG+ +NL A V + D WNP + Q+ DR HRIGQ + V +
Sbjct: 683 FMNNIQCEVFLVSLKAGGVALNLCEASQVFILDPWWNPSVEWQSGDRVHRIGQYRPVKIT 742
Query: 565 RFVTENAIEEKVIERAAQKLRLDQLVIQQ 593
RF E++IE ++IE +K + I Q
Sbjct: 743 RFCIEDSIEARIIELQEKKANMIHATINQ 771
>SPCC330.01c [L] KOG1002 Nucleotide excision repair protein RAD16
Length = 963
Score = 89.7 bits (221), Expect = 2e-17
Identities = 49/149 (32%), Positives = 82/149 (54%), Gaps = 1/149 (0%)
Query: 445 IVLDKLLKKKKEQGSRVLIFSQMSRLLDILEDYCYFRGYEYCRIDGSTSHDERVEAIDEY 504
+V + L +KK++ + ++FSQ + +LD++ G+ ++DG + R I+ +
Sbjct: 797 LVEELYLLRKKDRTLKSIVFSQFTSMLDLIHWRLRKAGFNCVKLDGGMTPKARAATIEAF 856
Query: 505 NKPNSEKFIFLLTTRAGGLGINLVTADTVVLYDSDWNPQADLQAMDRAHRIGQKKQVFVY 564
+ + IFL++ +AGG+ +NL A V + D WN QAMDR HRIGQK+ + V
Sbjct: 857 SN-DINITIFLVSLKAGGVALNLTEASQVFMMDPWWNGAVQWQAMDRIHRIGQKRPIKVI 915
Query: 565 RFVTENAIEEKVIERAAQKLRLDQLVIQQ 593
EN+IE K+IE +K ++ I Q
Sbjct: 916 TLCIENSIESKIIELQEKKAQMIHATIDQ 944
Score = 87.0 bits (214), Expect = 1e-16
Identities = 89/354 (25%), Positives = 153/354 (43%), Gaps = 86/354 (24%)
Query: 136 LRDYQVYGLNWLISLHESKLSG-ILADEMGLGKTLQSISFLGYLRYIKGIEGPYIVIVPK 194
L +Q G+ WL +S G ILADEMG+GKT+Q+I+ L L +G P +V+ P
Sbjct: 357 LLPFQREGVYWLKRQEDSSFGGGILADEMGMGKTIQTIALL--LSEPRG--KPTLVVAPV 412
Query: 195 STLDNWQREFAKWTPE-VKTVILQGD-KDFRKELIETKILTCNFDVLITSYEM------- 245
+ W+ E T + + T + G +D E + + +DV++TSY +
Sbjct: 413 VAIMQWKEEIDTHTNKALSTYLYYGQARDISGEELSS------YDVVLTSYNVIESVYRK 466
Query: 246 ----------VLKEKLTLKRFAWEYILIDEAHRIKNEQSALSQVIRLFYSKNRLLITGTP 295
V+KEK L + + I++DEAH IK+ ++ + + ++ ++GTP
Sbjct: 467 ERSGFRRKNGVVKEKSLLHQMEFYRIILDEAHGIKSRTCNTARAVCGLRTTRKICLSGTP 526
Query: 296 LQNNLHELWALLNFLLPDV-----------------FGDSEVFDEW-------------- 324
LQN + EL++LL FL D F D DE
Sbjct: 527 LQNRIGELFSLLRFLRADPFAYYYCLQCECKSLHWRFSDRSNCDECGHKPMSHTCYFNAE 586
Query: 325 ----FQQNGKEEDQEVVVQQLHSVLQPFLLRRVK-------------SEVEKSLLPKKEI 367
Q+ G E ++ +++HS+L+ +LRR K EV K L ++E
Sbjct: 587 MLKPIQKFGYEGPGKLAFKKVHSLLKHIMLRRTKLERADDLGLPPRVVEVRKDLFNEEEE 646
Query: 368 NLYVGMTDMQIEWYKSLLEKDIDAVNGAVGKREGKTRLLNIVMQLRKCCNHPYL 421
++Y + + + L + + N A + ++ ++R+ +HP L
Sbjct: 647 DVYQSLYMDSKRKFNTYLAEGVVLNNYA--------NIFQLITRMRQMADHPDL 692
>At1g61140 [KL] KOG1001 Helicase-like transcription factor HLTF/DNA helicase
RAD5 DEAD-box superfamily
Length = 1287
Score = 88.6 bits (218), Expect = 5e-17
Identities = 44/129 (34%), Positives = 79/129 (61%), Gaps = 1/129 (0%)
Query: 455 KEQGSRVLIFSQMSRLLDILEDYCYFRGYEYCRIDGSTSHDERVEAIDEYNKPNSEKFIF 514
K G + ++FSQ +++L++LE +Y R+DG+ S R +A+ ++N E +
Sbjct: 1127 KVAGEKAIVFSQWTKMLNLLEASLVSSHIQYRRLDGTMSVAARDKAVQDFNTL-PEVTVM 1185
Query: 515 LLTTRAGGLGINLVTADTVVLYDSDWNPQADLQAMDRAHRIGQKKQVFVYRFVTENAIEE 574
+++ +A LG+N+V A V++ D WNP + QA+DRAHRIGQ + V V RF ++ +E+
Sbjct: 1186 IMSLKAASLGLNMVAACHVLMLDLWWNPTTEDQAIDRAHRIGQTRPVTVVRFTVKDTVED 1245
Query: 575 KVIERAAQK 583
+++ +K
Sbjct: 1246 RILALQQKK 1254
Score = 62.8 bits (151), Expect = 3e-09
Identities = 48/182 (26%), Positives = 90/182 (49%), Gaps = 13/182 (7%)
Query: 253 LKRFAWEYILIDEAHRIKNEQSALSQVIRLFYSKNRLLITGTPLQNNLHELWALLNFLLP 312
L + +W +++DEA IKN ++ +++ +K R ++GTP+QN++ +L++ FL
Sbjct: 789 LAKVSWFRVVLDEAQSIKNYKTQVARACWGLRAKRRWCLSGTPIQNSIDDLYSYFRFLKY 848
Query: 313 DVFGDSEVFDEWFQQNGKEEDQEVVVQQLHSVLQPFLLRRVKSEVEKS----LLPKKEIN 368
D + +F +N + Q+L ++L+ +LRR K + LP K I
Sbjct: 849 DPYSSYVLFCSTI-KNPITRNPVKGYQKLQAILKTVMLRRTKGSLLDGKPIISLPPKSIE 907
Query: 369 L-YVGMTDMQIEWYKSLLEKDID-----AVNGAVGKREGKTRLLNIVMQLRKCCNHPYLF 422
L V T + ++Y L + A G V ++ +L ++++LR+ C+HP L
Sbjct: 908 LRKVDFTVEERDFYSKLEAESRTQFREYAEAGTV--KQNYVNILLMLLRLRQACDHPLLV 965
Query: 423 EG 424
G
Sbjct: 966 NG 967
>At1g50410 [KL] KOG1001 Helicase-like transcription factor HLTF/DNA helicase
RAD5 DEAD-box superfamily
Length = 1056
Score = 88.6 bits (218), Expect = 5e-17
Identities = 55/167 (32%), Positives = 90/167 (52%), Gaps = 4/167 (2%)
Query: 445 IVLDKLLKKKKEQGS--RVLIFSQMSRLLDILEDYCYFRGYEYCRIDGSTSHDERVEAID 502
IV LK G + +IFSQ + +LD++E E+ R+DG+ S R A+
Sbjct: 886 IVEKTSLKSTPSNGGPIKTIIFSQWTGMLDLVELSLIENSIEFRRLDGTMSLIARDRAVK 945
Query: 503 EYNKPNSEKFIFLLTTRAGGLGINLVTADTVVLYDSDWNPQADLQAMDRAHRIGQKKQVF 562
E++ K + +++ +AG LG+N++ A V+L D WNP + QA+DRAHRIGQ + V
Sbjct: 946 EFSNDPDVK-VMIMSLKAGNLGLNMIAACHVILLDLWWNPTTEDQAIDRAHRIGQTRPVT 1004
Query: 563 VYRFVTENAIEEKVIERAAQKLRLDQLVIQQGTGKKTSALTNNKDDL 609
V R +N +E++++ +K ++ + G +SA DDL
Sbjct: 1005 VTRITIKNTVEDRILALQEEKRKMVASAFGEDHG-GSSATRLTVDDL 1050
Score = 61.6 bits (148), Expect = 6e-09
Identities = 46/180 (25%), Positives = 85/180 (46%), Gaps = 13/180 (7%)
Query: 252 TLKRFAWEYILIDEAHRIKNEQSALSQVIRLFYSKNRLLITGTPLQNNLHELWALLNFLL 311
TL + W +++DEA IKN ++ +++ +K R ++GTP+QN + +L++ FL
Sbjct: 540 TLAKVGWFRVVLDEAQTIKNHRTQVARACCGLRAKRRWCLSGTPIQNTIDDLYSYFRFLK 599
Query: 312 PDVFGDSEVFDEWFQQNGKEEDQEVVVQQLHSVLQPFLLRRVKSEVEKSL----LPKKEI 367
D + + F + + ++L +VL+ +LRR K + LP K I
Sbjct: 600 YDPYAVYKSFCHQIKGPISRNSLQ-GYKKLQAVLRAIMLRRTKGTLLDGQPIINLPPKTI 658
Query: 368 NLYVGMTDMQIEWYKSLLEKDID------AVNGAVGKREGKTRLLNIVMQLRKCCNHPYL 421
NL D +E ++ + D A A + +L ++++LR+ C+HP L
Sbjct: 659 NL--SQVDFSVEERSFYVKLESDSRSQFKAYAAAGTLNQNYANILLMLLRLRQACDHPQL 716
>7298962 [KL] KOG4439 RNA polymerase II transcription termination factor
TTF2/lodestar DEAD-box superfamily
Length = 965
Score = 88.6 bits (218), Expect = 5e-17
Identities = 47/158 (29%), Positives = 88/158 (54%), Gaps = 1/158 (0%)
Query: 445 IVLDKLLKKKKEQGSRVLIFSQMSRLLDILEDYCYFRGYEYCRIDGSTSHDERVEAIDEY 504
+V+DKL + ++++ SQ L I+ +E +G + ER + ++
Sbjct: 794 MVIDKLEELLTGTNDKIIVTSQWVSYLAIVRKRLQDLSWETLDFNGQLTAKEREIVLRDF 853
Query: 505 NKPNSEKFIFLLTTRAGGLGINLVTADTVVLYDSDWNPQADLQAMDRAHRIGQKKQVFVY 564
N N+EK + LL+ AGG+G+NL A+ +++ D WNPQ + QA DR +R GQ K F+Y
Sbjct: 854 NA-NNEKRVLLLSLTAGGVGLNLNVANHMLIVDLHWNPQLERQAQDRIYRYGQTKPTFIY 912
Query: 565 RFVTENAIEEKVIERAAQKLRLDQLVIQQGTGKKTSAL 602
R++ ++ +E+++ KL + ++V+ + G+ T +
Sbjct: 913 RYMCQDTVEQRIKSLQDCKLEIAKVVLPEEGGEVTKCV 950
Score = 64.7 bits (156), Expect = 7e-10
Identities = 59/219 (26%), Positives = 105/219 (47%), Gaps = 31/219 (14%)
Query: 189 IVIVPKSTLDNWQREFAKWTPEVKTVILQGDKDFRKEL-IETKILTCNFDVLITSYEMVL 247
+V+ P S + W E A + +L R E+ IE ++D++ITSY +V+
Sbjct: 393 LVVCPMSVMCQWAHEVASKVAQNAIRVLTFHGPNRHEIGIEA---FRSYDLVITSYNLVV 449
Query: 248 KEKLTLKRFA---------WEYILIDEAHRIKNEQSALSQVIRLFYSKNRLLITGTPLQN 298
E LKR+ W +++DEAH I+N ++ + + +TGTP+QN
Sbjct: 450 NE---LKRYGNTSPLFAVYWNRVILDEAHIIRNSKTNCCNSVCQLRAHCHWALTGTPVQN 506
Query: 299 NLHELWALLNFLLPDVFGDSEVFDEWFQQNGKEEDQEVV-VQQLHSVLQPFLLRRVKSEV 357
+++ALL F+ F D QQ K ++ ++ ++L+ +++P +LRR K ++
Sbjct: 507 RGVDVFALLRFVNVPNFQD-------LQQWKKNLNESMLGHRRLNFIIKPLMLRRTKQKL 559
Query: 358 EKS----LLPKKEINL---YVGMTDMQIEWYKSLLEKDI 389
+ S LP +I L + T+M + S + K I
Sbjct: 560 QASGDMPALPSLKIELICVQLSKTEMAVYQILSAISKKI 598
>At1g11100 [KL] KOG1001 Helicase-like transcription factor HLTF/DNA helicase
RAD5 DEAD-box superfamily
Length = 1227
Score = 88.2 bits (217), Expect = 6e-17
Identities = 42/129 (32%), Positives = 78/129 (59%), Gaps = 1/129 (0%)
Query: 458 GSRVLIFSQMSRLLDILEDYCYFRGYEYCRIDGSTSHDERVEAIDEYNKPNSEKFIFLLT 517
G + ++F+Q +++LD+LE G +Y R DG + R A+ ++N + + +++
Sbjct: 1072 GEKAIVFTQWTKMLDLLEAGLKSSGIQYRRFDGKMTVPARDAAVQDFNTL-PDVSVMIMS 1130
Query: 518 TRAGGLGINLVTADTVVLYDSDWNPQADLQAMDRAHRIGQKKQVFVYRFVTENAIEEKVI 577
+A LG+N+V A V++ D WNP + QA+DRAHRIGQ + V V RF ++ +E++++
Sbjct: 1131 LKAASLGLNMVAACHVIMLDLWWNPTTEDQAIDRAHRIGQTRPVKVVRFTVKDTVEDRIL 1190
Query: 578 ERAAQKLRL 586
+K ++
Sbjct: 1191 ALQQKKRKM 1199
Score = 71.6 bits (174), Expect = 6e-12
Identities = 88/358 (24%), Positives = 148/358 (40%), Gaps = 71/358 (19%)
Query: 128 PSFIKEGKLRDYQVYGLNWLISLHESK---LSGILADEMGLGKTLQSISFLGYLR---YI 181
P + L +Q L+W+ S GILAD+ GLGKT+ +I+ + R Y+
Sbjct: 534 PDGVLAVSLLRHQRIALSWMSQKETSGNPCFGGILADDQGLGKTVSTIALILTERSTPYL 593
Query: 182 ------------------------KGIEGPY-----------IVIVPKSTLDNWQREFAK 206
K +E +++ P S + W E K
Sbjct: 594 PCEEDSKNGGCNQSDHSQVVFNENKVVEDSLCKMRGRPAAGTLIVCPTSLMRQWADELRK 653
Query: 207 W-TPEVK-TVILQGDKDFRKELIETKILTCNFDVLITSYEMVLKEKLT-----------L 253
T E +V++ K+ E +DV+IT+Y +V K K L
Sbjct: 654 KVTLEAHLSVLVYHGCSRTKDPHEL----AKYDVVITTYSLVSKRKHMDCEPVEFLSGPL 709
Query: 254 KRFAWEYILIDEAHRIKNEQSALSQVIRLFYSKNRLLITGTPLQNNLHELWALLNFLLPD 313
+ +W +++DEA IKN ++ S ++K R ++GTP+QN++ +L++ FL D
Sbjct: 710 AQVSWFRVVLDEAQSIKNYKTQASIACSGLHAKRRWCLSGTPIQNSIADLYSYFRFLKYD 769
Query: 314 VFGDSEVFDEWFQQNGKEEDQEVVVQQLHSVLQPFLLRRVKSEVEKS----LLPKKEINL 369
+ + F E + E + L ++L+ +LRR K + LP K I L
Sbjct: 770 PYSSYQTFCETIKNPISSYPGE-GYKTLQAILKKVMLRRTKDTLLDGKPVISLPPKSIEL 828
Query: 370 -YVGMTDMQIEWYKSLLEKDID-----AVNGAVGKREGKTRLLNIVMQLRKCCNHPYL 421
V T + ++Y L D A G V ++ +L ++++LR+ C HP L
Sbjct: 829 RRVDFTKEERDFYSKLECDSRDQFKEYAEAGTV--KQNYVNILLMLLRLRQACGHPLL 884
>At1g48310 [B] KOG1000 Chromatin remodeling protein HARP/SMARCAL1 DEAD-box
superfamily
Length = 675
Score = 87.8 bits (216), Expect = 8e-17
Identities = 84/367 (22%), Positives = 159/367 (42%), Gaps = 42/367 (11%)
Query: 240 ITSYEMVLKEKLTLKRFAWEYILIDEAHRIKNEQ----SALSQVIRLFYSKNRLLITGTP 295
I SY++V K L ++ ++ DE+H +KN Q SA VI+ ++ +L++GTP
Sbjct: 301 IVSYDVVTKLDKLLMALDFKVVIADESHFLKNGQAKRTSACLPVIKK--AQYAILLSGTP 358
Query: 296 LQNNLHELWALLNFLLPDVFGDSEVFDEWFQQNGKEEDQEVVVQ---------------- 339
+ EL+ L L PDV+ + + + + E + +
Sbjct: 359 ALSRPIELFKQLEALYPDVYRNIHEYGGRYCKGVSPLHIEKLPRSSYKGFFGTYQGASNH 418
Query: 340 -QLHSVLQP-FLLRRVKSEVEKSLLPKKEINLYVGMTDMQIEWYKSLLEKDIDAVNGAVG 397
+LH++++ ++RR+K +V L K+ +++ + ++ +L ++ V +
Sbjct: 419 DELHNLMKATVMIRRLKKDVLTELPSKRRQQVFLDLAAKDMKQINALFH-ELKVVKSKIK 477
Query: 398 KREGKTRLLNIVMQLRKCCNHPYLFEGAEPGPPYTTDEHLVFNSGKMIVLDKLLKKKKEQ 457
+ + ++ + N Y P VLD L+ E
Sbjct: 478 DCISEDDIKSLKFIEKNLINKIYTDSAVAKIPA---------------VLD-YLENVIEA 521
Query: 458 GSRVLIFSQMSRLLDILEDYCYFRGYEYCRIDGSTSHDERVEAIDEYNKPNSEKFIFLLT 517
G + L+F+ +L+ L + + RIDGST R + ++ + K +L+
Sbjct: 522 GCKFLVFAHHQSMLEELHQFLKKKKVGCIRIDGSTPASSRQALVSDFQDKDEIKAA-VLS 580
Query: 518 TRAGGLGINLVTADTVVLYDSDWNPQADLQAMDRAHRIGQKKQVFVYRFVTENAIEEKVI 577
RA G+GI L A TV+ + W P +QA DRAHRIGQ V ++ + + +++ +
Sbjct: 581 IRAAGVGITLTAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNIHYLLANDTVDDIIW 640
Query: 578 ERAAQKL 584
+ KL
Sbjct: 641 DVVQSKL 647
>CE11450 [KL] KOG4439 RNA polymerase II transcription termination factor
TTF2/lodestar DEAD-box superfamily
Length = 518
Score = 87.0 bits (214), Expect = 1e-16
Identities = 41/124 (33%), Positives = 72/124 (58%)
Query: 482 GYEYCRIDGSTSHDERVEAIDEYNKPNSEKFIFLLTTRAGGLGINLVTADTVVLYDSDWN 541
G+ Y I G + +R E +D +N+ LL+ AGG+G+NL+ + +++ D WN
Sbjct: 379 GHGYTSITGEVAIKDRQERVDSFNQEKGGAQDMLLSLTAGGVGLNLIGGNHLIMVDLHWN 438
Query: 542 PQADLQAMDRAHRIGQKKQVFVYRFVTENAIEEKVIERAAQKLRLDQLVIQQGTGKKTSA 601
P + QA DR +R+GQKK+V ++R + + IE++V+ +KL L V++ + +
Sbjct: 439 PALEQQACDRIYRMGQKKEVHIHRLIVKETIEQRVMSLQEKKLALAASVLEGSATRGMNK 498
Query: 602 LTNN 605
LTN+
Sbjct: 499 LTNS 502
Score = 65.9 bits (159), Expect = 3e-10
Identities = 51/181 (28%), Positives = 86/181 (47%), Gaps = 17/181 (9%)
Query: 136 LRDYQVYGLNWLISLHESKLSG-ILADEMGLGKTLQSISFLGYLRYIKGI--EGPYIVIV 192
L +Q GL WL+ SG IL +MGLGKTL IS + + + + + I
Sbjct: 144 LMPHQKAGLCWLLWRESQPHSGGILGGDMGLGKTLSMISLIVHQKAARKTRKDAGDDAIA 203
Query: 193 PKSTLDNWQREFAKWTPE--VKTVILQGD------KDFRKEL-----IETKILTCNFDVL 239
P+S + +W+ E A+ + + ++ G+ KD +K + +E + C+ +
Sbjct: 204 PESLVHHWEAEIARRLKQDLLSVLVYHGNRRHINPKDLKKHIELDYDLEDEHNPCS-KLR 262
Query: 240 ITSYEMVLKEKLTLKRFAWEYILIDEAHRIKNEQSALSQVIRLFYSKNRLLITGTPLQNN 299
K L R AW Y+++DEAH IKN + S+ + +R ++GTP+ NN
Sbjct: 263 PRVCPKADKNSSPLARIAWSYVILDEAHIIKNRNAQCSEAACKISAFSRWCLSGTPIHNN 322
Query: 300 L 300
+
Sbjct: 323 M 323
>At3g16600 [KL] KOG1001 Helicase-like transcription factor HLTF/DNA helicase
RAD5 DEAD-box superfamily
Length = 638
Score = 85.5 bits (210), Expect = 4e-16
Identities = 88/334 (26%), Positives = 149/334 (44%), Gaps = 72/334 (21%)
Query: 136 LRDYQVYGLNWLISLHESK---LSGILADEMGLGKTLQSISFLGYLRYIKGIE------- 185
L +Q LNW+ + L GILAD+ GLGKT+ +IS + L+ +K
Sbjct: 53 LMRHQKIALNWMRKKEKRSRHCLGGILADDQGLGKTISTISLI-LLQKLKSQSKQRKRKG 111
Query: 186 ---GPYIVIVPKSTLDNWQREFA-KWTPEVKTVILQGDKDFR-KELIETKILTCNFDVLI 240
G +++ P S + W RE K + E K +L R K+ E I +DV++
Sbjct: 112 QNSGGTLIVCPASVVKQWAREVKEKVSDEHKLSVLVHHGSHRTKDPTEIAI----YDVVM 167
Query: 241 TSYEMVLKEKL----------------------------TLKRFAWEYILIDEAHRIKNE 272
T+Y +V E L R W +++DEAH IKN
Sbjct: 168 TTYAIVTNEVPQNPMLNRYDSMRGRESLDGSSLIQPHVGALGRVRWLRVVLDEAHTIKNH 227
Query: 273 QSALSQVIRLFYSKNRLLITGTPLQNNLHELWALLNFLLPDVFGDSEVFDEWFQQNGKEE 332
++ +++ +K R +TGTP++N + +L++ FL + + + + Q+
Sbjct: 228 RTLIAKACFSLRAKRRWCLTGTPIKNKVDDLYSYFRFLR---YHPYAMCNSFHQRIKAPI 284
Query: 333 DQEVV--VQQLHSVLQPFLLRRVKSEVEKSLLPKKEINLYVGMTDMQIEWYKSLLEKDID 390
D++ + ++L ++L+ +LRR K E S K E+N + + E Y
Sbjct: 285 DKKPLHGYKKLQAILRGIMLRRTK---EWSFYRKLELN-----SRWKFEEY--------- 327
Query: 391 AVNGAVGKREGKTRLLNIVMQLRKCCNHPYLFEG 424
A +G + E LL ++++LR+ CNHP L G
Sbjct: 328 AADGTL--HEHMAYLLVMLLRLRQACNHPQLVNG 359
Score = 70.9 bits (172), Expect = 1e-11
Identities = 45/137 (32%), Positives = 70/137 (50%), Gaps = 4/137 (2%)
Query: 479 YFRGYEYCRIDGSTSHDERVEAIDEYNKPNSEKFI---FLLTTRAGGLGINLVTADTVVL 535
YF C D S + R ++ NK NS + L++ +AG LG+N+V A V+L
Sbjct: 473 YFIENPSCDRDSSVACRAR-QSRHSTNKDNSISGLVCAMLMSLKAGNLGLNMVAASHVIL 531
Query: 536 YDSDWNPQADLQAMDRAHRIGQKKQVFVYRFVTENAIEEKVIERAAQKLRLDQLVIQQGT 595
D WNP + QA+DRAHRIGQ + V V R +N +EE+++ +K + + +
Sbjct: 532 LDLWWNPTTEDQAIDRAHRIGQTRAVTVTRIAIKNTVEERILTLHERKRNIVASALGEKN 591
Query: 596 GKKTSALTNNKDDLIDM 612
+K TN + I +
Sbjct: 592 WQKFCDSTNTRRSRISV 608
>At1g05120 [L] KOG1002 Nucleotide excision repair protein RAD16
Length = 833
Score = 85.5 bits (210), Expect = 4e-16
Identities = 47/149 (31%), Positives = 83/149 (55%), Gaps = 5/149 (3%)
Query: 454 KKEQGSRVLIFSQMSRLLDILEDYCYFRGYEYCRIDGSTSHDERVEAIDEYNKPNSEKFI 513
+++ ++ ++FSQ + LD++ G ++ GS + R AI+++ K + + +
Sbjct: 676 ERDGSAKAIVFSQFTSFLDLINYTLGKCGVSCVQLVGSMTMAARDTAINKF-KEDPDCRV 734
Query: 514 FLLTTRAGGLGINLVTADTVVLYDSDWNPQADLQAMDRAHRIGQKKQVFVYRFVTENAIE 573
FL++ +AGG+ +NL A V + D WNP + QA DR HRIGQ K + V RF+ EN +E
Sbjct: 735 FLMSLKAGGVALNLTVASHVFMMDPWWNPAVERQAQDRIHRIGQYKPIRVVRFIIENTVE 794
Query: 574 EKVIERAAQKLRLDQLVIQQGTGKKTSAL 602
E+++ +K +LV + G A+
Sbjct: 795 ERILRLQKKK----ELVFEGTVGGSQEAI 819
Score = 56.6 bits (135), Expect = 2e-07
Identities = 51/213 (23%), Positives = 88/213 (40%), Gaps = 39/213 (18%)
Query: 248 KEKLTLKRFAWEYILIDEAHRIKNEQSALSQVIRLFYSKNRLLITGTPLQNNLHELWALL 307
KEK L W I++DEAH IK +S ++ + + R ++GTPLQN + EL++L+
Sbjct: 344 KEKSLLHSVKWNRIILDEAHYIKERRSNTARAVFALEATYRWALSGTPLQNRVGELYSLI 403
Query: 308 NFLLPDVFG-------DSEVFDE------------------WFQQNGKEE---------D 333
FL + D + D W+ + +
Sbjct: 404 RFLQIRPYSYYFCKDCDCRILDYVAHQSCPHCPHNAVRHFCWWNKYVAKPITVYGSFGLG 463
Query: 334 QEVVVQQLHSVLQPFLLRRVK-SEVEKSLLPKKEINLYVGMTDM-QIEWYKSLLEKDIDA 391
+ ++ H VL+ LLRR K LP + I L D+ + ++Y+SL +
Sbjct: 464 KRAMILLKHKVLKDILLRRTKLGRAADLALPPRIITLRRDTLDVKEFDYYESLYKNSQAE 523
Query: 392 VNGAVGK---REGKTRLLNIVMQLRKCCNHPYL 421
N + + +++ +LR+ +HPYL
Sbjct: 524 FNTYIEAGTLMNNYAHIFDLLTRLRQAVDHPYL 556
Score = 53.5 bits (127), Expect = 2e-06
Identities = 37/116 (31%), Positives = 57/116 (48%), Gaps = 8/116 (6%)
Query: 139 YQVYGLNWLISLHESKLSGILADEMGLGKTLQSISFLGYLRYIKGIE-----GPYIVIVP 193
YQ L W +S GILADEMG+GKT+Q+IS + R + + G +V+ P
Sbjct: 142 YQKEFLAWATKQEQSVAGGILADEMGMGKTIQAISLVLARREVDRAQFGEAAGCTLVLCP 201
Query: 194 KSTLDNWQREFAKWTPEVKTVILQGDKDFRKELIETKILTCNFDVLITSYEMVLKE 249
+ W E A++T T +L R + I+ + N+D ++T+Y V E
Sbjct: 202 LVAVSQWLNEIARFTSPGSTKVLVYHGAKRAKNIKEFM---NYDFVLTTYSTVESE 254
>YLR032w [KL] KOG1001 Helicase-like transcription factor HLTF/DNA helicase
RAD5 DEAD-box superfamily
Length = 1169
Score = 85.1 bits (209), Expect = 5e-16
Identities = 87/361 (24%), Positives = 158/361 (43%), Gaps = 66/361 (18%)
Query: 157 GILADEMGLGKTLQSISFLGYLRYIKGI------------------------EGPY---- 188
GIL+DEMGLGKT+ + S + + + + PY
Sbjct: 528 GILSDEMGLGKTVAAYSLVLSCPHDSDVVDKKLFDIENTAVSDNLPSTWQDNKKPYASKT 587
Query: 189 -IVIVPKSTLDNWQREFAKW--TPEVKTVILQGDKDFRKELIETKILTCNFDVLITSYEM 245
+++VP S L W EF K +P++ + G + + TK T V++T+Y +
Sbjct: 588 TLIVVPMSLLTQWSNEFTKANNSPDMYHEVYYGGNVSSLKTLLTKTKTPP-TVVLTTYGI 646
Query: 246 VLKE--------------KLTLKRFAWEY--ILIDEAHRIKNEQSALSQVIRLFYSKNRL 289
V E ++ F+ + I+IDE H I+N + S+ + K +
Sbjct: 647 VQNEWTKHSKGRMTDEDVNISSGLFSVNFYRIIIDEGHNIRNRTTVTSKAVMALQGKCKW 706
Query: 290 LITGTPLQNNLHELWALLNFLLPDVFGDSEVFDEWFQQNGKEEDQEVVVQQLHSVLQPFL 349
++TGTP+ N L +L++L+ FL D + + + + ++ + ++++L+P L
Sbjct: 707 VLTGTPIINRLDDLYSLVKFLELDPWRQINYWKTFVSTPFESKNYKQAFDVVNAILEPVL 766
Query: 350 LRRVKSEVEK------SLLPKKEINLYVGMTDMQIEWYKSLLEKDIDAVNGAVGKRE--- 400
LRR K +K L PK+ + + + Q YK LL+K +V + + +
Sbjct: 767 LRRTKQMKDKDGKPLVELPPKEVVIKRLPFSKSQDLLYKFLLDKAEVSVKSGIARGDLLK 826
Query: 401 GKTRLLNIVMQLRKCCNHPYLFEGAEPGPPYTTDEHLVFN----SGKMIVLDKLLKKKKE 456
+ +L +++LR+ C HP L G DE L N + + + LD L++ E
Sbjct: 827 KYSTILVHILRLRQVCCHPGLI-----GSQDENDEDLSKNNKLVTEQTVELDSLMRVVSE 881
Query: 457 Q 457
+
Sbjct: 882 R 882
Score = 84.3 bits (207), Expect = 9e-16
Identities = 56/150 (37%), Positives = 85/150 (56%), Gaps = 7/150 (4%)
Query: 441 SGKMIVLDKLLKKKKEQ--GSRVLIFSQMSRLLDILE-DYCYFRGYEYCRI---DGSTSH 494
S K+ L K L+ ++ G +V+IFSQ S LDILE + + + +I DG S
Sbjct: 993 SSKITALLKELQLLQDSSAGEQVVIFSQFSTYLDILEKELTHTFSKDVAKIYKFDGRLSL 1052
Query: 495 DERVEAIDEYN-KPNSEKFIFLLTTRAGGLGINLVTADTVVLYDSDWNPQADLQAMDRAH 553
ER + ++ K S + I LL+ +AGG+G+NL A + D W+P + QA+DR H
Sbjct: 1053 KERTSVLADFAVKDYSRQKILLLSLKAGGVGLNLTCASHAYMMDPWWSPSMEDQAIDRLH 1112
Query: 554 RIGQKKQVFVYRFVTENAIEEKVIERAAQK 583
RIGQ V V RF+ +++IEEK++ +K
Sbjct: 1113 RIGQTNSVKVMRFIIQDSIEEKMLRIQEKK 1142
>YOR191w [KL] KOG1001 Helicase-like transcription factor HLTF/DNA helicase
RAD5 DEAD-box superfamily
Length = 1619
Score = 83.2 bits (204), Expect = 2e-15
Identities = 84/347 (24%), Positives = 148/347 (42%), Gaps = 70/347 (20%)
Query: 136 LRDYQVYGLNWLISLHES-KLSGILADEMGLGKTLQSISFLGYLRYIKGIEGPYIVIVPK 194
L +Q GL+WL+ + S K G+LAD+MGLGKT+Q+I+ + R + +++ P
Sbjct: 943 LLKHQRLGLHWLLQVENSAKKGGLLADDMGLGKTIQAIALMLANRSEESKCKTNLIVAPV 1002
Query: 195 STLDNWQREF-------AKWTPEVKTVILQGDKDFRKELIETKILTCNFDVLITSYEMVL 247
S L W+ E AK+T + G ++L + ++ L ++
Sbjct: 1003 SVLRVWKGELETKVKKRAKFTTFIFGGSGNGKVKHWRDLARYDAVLVSYQTLANEFKKHW 1062
Query: 248 KEKL--------------TLKRFAW--EY-------------ILIDEAHRIKNEQSALSQ 278
+KL L R EY IL+DE IKN+ + S+
Sbjct: 1063 PKKLDGEQNQLPAVPHIQALNRLKTSNEYYSPFFCNDSTFYRILLDEGQNIKNKNTRASK 1122
Query: 279 VIRLFYSKNRLLITGTPLQNNLHELWALLNFLLPDVFGDSEVF----DEWFQQNGK---- 330
R +++GTP+QN++ EL++L+ FL + + F +FQ+N +
Sbjct: 1123 ACCTINGMYRWVLSGTPIQNSMDELYSLIRFLRIPPYHKEQRFKLDIGRFFQRNKQYQYD 1182
Query: 331 EEDQEVVVQQLHSVLQPFLLRRVKS----------------EVEKSLLPKKEINLYVGMT 374
ED++ ++++ +L +LRR K+ EV++S L +E+ Y +
Sbjct: 1183 NEDRKNALRKVRVLLNAIMLRRSKADKIDGKPLLELPPKIVEVDESRLKGEELKFYTALE 1242
Query: 375 DMQIEWYKSLLEKDIDAVNGAVGKREGKTRLLNIVMQLRKCCNHPYL 421
K LL R + +L ++++LR+ C H L
Sbjct: 1243 SKNQALAKKLLNN---------STRGSYSSVLTLLLRLRQACCHSEL 1280
Score = 81.6 bits (200), Expect = 6e-15
Identities = 44/144 (30%), Positives = 83/144 (57%), Gaps = 2/144 (1%)
Query: 460 RVLIFSQMSRLLDILEDYCYFR-GYEYCRIDGSTSHDERVEAIDEYNKPNSEKFIFLLTT 518
+++IFSQ + +ILE + + + Y + GS + R + I+E+ + + EK I L++
Sbjct: 1463 KIIIFSQFTTFFEILEHFLKNKLNFPYLKYIGSMNAQRRSDVINEFYR-DPEKRILLISM 1521
Query: 519 RAGGLGINLVTADTVVLYDSDWNPQADLQAMDRAHRIGQKKQVFVYRFVTENAIEEKVIE 578
+AG G+ L A+ VV+ D WNP + QA DR +RI Q K+V V++ ++++E+++ E
Sbjct: 1522 KAGNSGLTLTCANHVVIVDPFWNPYVEEQAQDRCYRISQTKKVQVHKLFIKDSVEDRISE 1581
Query: 579 RAAQKLRLDQLVIQQGTGKKTSAL 602
+K + + G K+ ++L
Sbjct: 1582 LQKRKKEMVDSAMDPGKIKEVNSL 1605
>Hs22048060 [K] KOG0384 Chromodomain-helicase DNA-binding protein
Length = 122
Score = 76.3 bits (186), Expect = 2e-13
Identities = 35/71 (49%), Positives = 49/71 (68%)
Query: 156 SGILADEMGLGKTLQSISFLGYLRYIKGIEGPYIVIVPKSTLDNWQREFAKWTPEVKTVI 215
S ILADEMGLGKT+Q ISFL YL + + GP++++VP ST+ +WQREF W ++ V+
Sbjct: 31 SVILADEMGLGKTIQVISFLSYLFNVHQLYGPFLIVVPLSTMTSWQREFEAWDSKMNVVV 90
Query: 216 LQGDKDFRKEL 226
GD + R +
Sbjct: 91 YIGDINSRNSV 101
>At2g40770 [L] KOG0298 DEAD box-containing helicase-like transcription
factor/DNA repair protein
Length = 1648
Score = 71.6 bits (174), Expect = 6e-12
Identities = 79/333 (23%), Positives = 146/333 (43%), Gaps = 66/333 (19%)
Query: 186 GPYIVIVPKSTLDNWQREFAKWTP--EVKTVILQGDKDF---RKELIE-TKILTCNFDVL 239
G +++ P L W E + T + T I +G ++ + +I+ T++L N D++
Sbjct: 484 GATLIVCPAPILPQWHSEITRHTRLGSLITCIYEGVRNASLSEEPMIDITELL--NADIV 541
Query: 240 ITSYEMVLKEKLT-------------------------LKRFAWEYILIDEAHRIKNEQS 274
+T+Y+ VLKE LT L R W I +DEA +++ +
Sbjct: 542 LTTYD-VLKEDLTHDFDRHDGDRHCLRFQKRYPVIPTPLTRIFWWRICLDEAQMVESNAA 600
Query: 275 ALSQVIRLFYSKNRLLITGTPLQNNLHELWALLNFLLPDVFGDSEVFDEWFQQNGKEEDQ 334
A +++ Y+K+R ITGTP+Q L +L+ LL FL + F S + E + + D
Sbjct: 601 AATEMALRLYTKHRWCITGTPIQRKLDDLFGLLKFLKANPFDVSRWWIEVIRDPYERRDT 660
Query: 335 EVVVQQLHSVLQPFLLRRVKSEV--EKSLLPKKEINLYVGMTDMQIEWY----------- 381
+ ++ H + + R K V E L P++E ++ + ++ +Y
Sbjct: 661 K-AMEFTHKFFKQVMWRSSKVHVADELQLPPQEECVSWLKFSAIEEHFYSRQHDTCVSYA 719
Query: 382 --------KSLLEKDIDAVNGAVGKREGKTRLLNIVMQLRKCCNHPYLFEG---AEPGPP 430
+ +L++ + + + +LLN +++LR+ C HP + + P
Sbjct: 720 REVIETLKRDILKRGHTSSDNPLVTHAEAAKLLNSLLKLRQACCHPQVGSSGLRSLQQSP 779
Query: 431 YTTDEHLVFNSGKMIVLDKLLKKKKEQGSRVLI 463
T +E L +VL K + + E+ RVLI
Sbjct: 780 MTMEEIL-------MVLVKKTQSEGEEALRVLI 805
Score = 67.0 bits (162), Expect = 1e-10
Identities = 38/134 (28%), Positives = 64/134 (47%), Gaps = 10/134 (7%)
Query: 453 KKKEQGSRVLIFSQMSRLLDILEDYCYFRGYEYCRIDGSTSH----------DERVEAID 502
K + ++VL+FS + +LD+LE R+ G ++ + +
Sbjct: 1428 KSSDPQTKVLVFSSWNDVLDVLEHAFAANSITCIRMKGGRKSQTAISKFKGSEKETQKTN 1487
Query: 503 EYNKPNSEKFIFLLTTRAGGLGINLVTADTVVLYDSDWNPQADLQAMDRAHRIGQKKQVF 562
+ K + LL + G G+NL+ A V+L + NP A+ QA+ R HRIGQ+K
Sbjct: 1488 SHQKEEKSIQVLLLLVQHGANGLNLLEAQHVILVEPLLNPAAEAQAVGRVHRIGQEKPTL 1547
Query: 563 VYRFVTENAIEEKV 576
V+RF+ +EE +
Sbjct: 1548 VHRFLVSGTVEESI 1561
>CE23294 [KL] KOG4439 RNA polymerase II transcription termination factor
TTF2/lodestar DEAD-box superfamily
Length = 540
Score = 68.9 bits (167), Expect = 4e-11
Identities = 65/225 (28%), Positives = 105/225 (45%), Gaps = 26/225 (11%)
Query: 130 FIKEGKLRDYQVYGLNWLISLHESKLSG-ILADEMGLGKTLQSISFLGYLRYIKGI---- 184
F+ + +L +Q +W+I + SG IL G GKT I+ + + IK
Sbjct: 38 FVADFRLMPHQEAARDWMIDREAQEPSGGILGLAHGQGKTAIVIALI-LDQKIKCASNDK 96
Query: 185 ----EGPYIVIVPKSTLDNWQREFAKWTPE-VKTVILQGDKDF---RKELIETKILTCNF 236
+ P ++IVPK + W EF E +V L D +F RK + +++ +
Sbjct: 97 KFEQKSPTLIIVPKRIIYQWYDEFKDRLEENALSVYLYYDDEFSEARKNISASELQ--KY 154
Query: 237 DVLITSYEMV-LKEK---------LTLKRFAWEYILIDEAHRIKNEQSALSQVIRLFYSK 286
DV++T+Y V +KEK L+ W I++DEAH I++ + S I SK
Sbjct: 155 DVVLTTYRNVPVKEKDETGEKVSKQVLQNIKWTRIVLDEAHNIRDSNTKKSTAIATLASK 214
Query: 287 NRLLITGTPLQNNLHELWALLNFLLPDVFGDSEVFDEWFQQNGKE 331
NR +T P QN+ ++ L+ FL FG++ E +N K+
Sbjct: 215 NRWCVTAAPFQNSEWDICNLILFLGNKPFGENVKGPEKTPENLKK 259
>At5g07810 [B] KOG1000 Chromatin remodeling protein HARP/SMARCAL1 DEAD-box
superfamily
Length = 1178
Score = 67.4 bits (163), Expect = 1e-10
Identities = 39/126 (30%), Positives = 70/126 (54%), Gaps = 1/126 (0%)
Query: 459 SRVLIFSQMSRLLDILEDYCYFRGYEYCRIDGSTSHDERVEAIDEYNKPNSEKFIFLLTT 518
+++++F+ ++LD ++++ +G + RIDG+T +R A+ + +SE I ++
Sbjct: 543 TKMVVFAHHHKVLDGIQEFICDKGIGFVRIDGTTLPRDRQLAVQSFQF-SSEVKIAIIGV 601
Query: 519 RAGGLGINLVTADTVVLYDSDWNPQADLQAMDRAHRIGQKKQVFVYRFVTENAIEEKVIE 578
AGG+G++ A VV + P LQA DRAHR GQ V VY F ++ ++E +
Sbjct: 602 EAGGVGLDFSAAQNVVFLELPKTPSLLLQAEDRAHRRGQTSAVNVYIFCAKDTMDESNWQ 661
Query: 579 RAAQKL 584
+KL
Sbjct: 662 NLNKKL 667
Score = 53.9 bits (128), Expect = 1e-06
Identities = 41/146 (28%), Positives = 71/146 (48%), Gaps = 19/146 (13%)
Query: 159 LADEMGLGKTLQSISFLGYLRYIKGIEGPYIVIVPKSTLDNWQREFAKWTPEV---KTVI 215
+ADEMGLGKTLQ+I+ G +I EG +V+ P W E +W P +
Sbjct: 224 IADEMGLGKTLQAIAIAGC--FIS--EGSILVVCPAVLRFTWAEELERWLPSCLPSDVHL 279
Query: 216 LQGDKDFRKELIETKILTCNFDVLITSYEMVLKEKLTLKRFAWEYILIDEAHRI-----K 270
+ G +D L V++ SY+M+ + T+ W +++DE+H + K
Sbjct: 280 VFGHQDNPAYLPRWP------KVVVISYKMLQHLRTTMLEREWALLIVDESHHLRCSKKK 333
Query: 271 NEQSALSQVIRLFYS-KNRLLITGTP 295
++ + V+ + K+ +L++GTP
Sbjct: 334 SDPPEIKTVLDVAEKVKHIILLSGTP 359
>SPAC144.05 [L] KOG0298 DEAD box-containing helicase-like transcription
factor/DNA repair protein
Length = 1375
Score = 65.1 bits (157), Expect = 6e-10
Identities = 80/333 (24%), Positives = 147/333 (44%), Gaps = 63/333 (18%)
Query: 157 GILADEMGLGKTLQSISFLGYLRY------------IKGIEGPY----IVIVPKSTLDNW 200
GILADEMG+GKTL+ + + + + + G Y ++I P + LD W
Sbjct: 286 GILADEMGMGKTLEVLGLVLHHQLPISLTDTCTFDQVVGKNVKYSKATLIITPSTILDQW 345
Query: 201 QREFAKWTPEVKTVILQGDKDFRKELIETKILTCNFDVLITSY-----EMVLKE------ 249
E P +K QG + + +++ + + D+++TSY E++ E
Sbjct: 346 LSEIDLHVPSLKVFHYQGIR--KSNGLKSAKIFLDCDIVVTSYSDLRFELLYTESHSRTL 403
Query: 250 ---------KLTLKRFAWEYILIDEAHRIKNEQSALSQVIRLFYSKNRLLITGTPLQNNL 300
K L W I +DEA ++ QS ++Q+I N ++GTP+++ +
Sbjct: 404 RHEKRHVSPKSPLIDVCWWRICVDEAQMVETSQSNVAQMIYRIPRVNCWTVSGTPVRSEV 463
Query: 301 HELWALLNFLLPDVFGDSEVFDE--WFQQNGKEEDQEVVVQQLHSVLQPFLLRRVKSEVE 358
+L+ LL FLL + ++ + W Q K+ V++ + + R K +VE
Sbjct: 464 DDLFGLL-FLLR--YSPMYLYKKQAWMQIIEKKR-----VREFCDLFGSLVCRHSKQDVE 515
Query: 359 KSLL--PKKEINLYVGMTDMQIEWYKSLLEKDIDAV------NGAVGKREGKTRLLNIVM 410
+ L P+ I + ++ ++ Y+ LL + ++ N + E R L +
Sbjct: 516 EELKLPPQHRICMTTRLSVVEETNYQDLLSEAAKSLHFFKDRNLDLCDEESMRRWL---V 572
Query: 411 QLRKCCNHPYLFEGAEP----GPPYTTDEHLVF 439
+LR+ C HP + G + GP + ++ LVF
Sbjct: 573 RLRQACCHPQVGFGNKSAFGGGPMKSINDVLVF 605
Score = 58.9 bits (141), Expect = 4e-08
Identities = 39/141 (27%), Positives = 69/141 (48%), Gaps = 6/141 (4%)
Query: 450 LLKKKKEQGSRVLIFSQMSRLLDILEDYCYFRGYEYCRIDGSTSHDERVEAIDEYNKPNS 509
L K E +V++FSQ +LD+L G + R DG + + + + + S
Sbjct: 1196 LYLKHNELYPKVVVFSQWLDVLDVLHKSFEANGIVFIRFDGKSKNT----CLKRFKEERS 1251
Query: 510 EKFIFLLTTRAGGLGINLVTADTVVLYDSDWNPQADLQAMDRAHRIGQKKQVFVYRFVTE 569
+ + L R+ G+ L A V + + N ++QA+ R HRIGQ + FVY ++ E
Sbjct: 1252 LQ-VLTLHARSQSSGLTLTNATHVFMCEPLLNSGIEMQAISRVHRIGQTRPTFVYYYIVE 1310
Query: 570 NAIEEKVIERAAQK-LRLDQL 589
+ +E ++ + K +LD+L
Sbjct: 1311 DTVEGHILNLSLTKHEQLDKL 1331
>SPAC13G6.01c [KL] KOG1001 Helicase-like transcription factor HLTF/DNA helicase
RAD5 DEAD-box superfamily
Length = 104
Score = 64.3 bits (155), Expect = 1e-09
Identities = 26/71 (36%), Positives = 49/71 (68%)
Query: 513 IFLLTTRAGGLGINLVTADTVVLYDSDWNPQADLQAMDRAHRIGQKKQVFVYRFVTENAI 572
+ +++ +AGG+G+NL A+ V + D W+ + QA+DR HR+GQ+K VFV R++ + +
Sbjct: 6 VLIISLKAGGVGLNLTCANHVFIMDPWWSWSVEAQAIDRIHRLGQEKPVFVTRYIVRDTV 65
Query: 573 EEKVIERAAQK 583
EE++++ +K
Sbjct: 66 EERMLKIQERK 76
>Hs20532976 [B] KOG1000 Chromatin remodeling protein HARP/SMARCAL1 DEAD-box
superfamily
Length = 293
Score = 62.0 bits (149), Expect = 5e-09
Identities = 43/170 (25%), Positives = 77/170 (45%), Gaps = 3/170 (1%)
Query: 446 VLDKLLKKKKEQGSRVLIFSQMSRLLDILEDYCYFRGYEYCRIDGSTSHDERVEAIDEYN 505
V D + + + L+F+ +L + Y RIDGS S ER+ ++++
Sbjct: 74 VKDYIKMMLQNDSLKFLVFAHHLSMLQACTEAVIENKTRYIRIDGSVSSSERIHLVNQFQ 133
Query: 506 KPNSEKFIFLLTTRAGGLGINLVTADTVVLYDSDWNPQADLQAMDRAHRIGQKKQVFVYR 565
K + + +L+ +A G G+ A VV + W+P QA DRAHRIGQ V ++
Sbjct: 134 KDPDTR-VAILSIQAAGQGLTFTAASHVVFAELYWDPGHIKQAEDRAHRIGQCSSVNIHY 192
Query: 566 FVTENAIEEKVIERAAQKLRLDQLVIQQGTGKKTSALTNNKDDLIDMIQF 615
+ ++ + +K ++ + G +K A +K+ D +QF
Sbjct: 193 LIANGTLDTLMWGMLNRKAQVTGSTL-NGRKEKIQAEEGDKEKW-DFLQF 240
>Hs17441908 [B] KOG1000 Chromatin remodeling protein HARP/SMARCAL1 DEAD-box
superfamily
Length = 215
Score = 61.6 bits (148), Expect = 6e-09
Identities = 41/138 (29%), Positives = 73/138 (52%), Gaps = 13/138 (9%)
Query: 163 MGLGKTLQSISFLGYLRYIKGIEGPYIVIVPKSTLDNWQREFAKWTPEV---KTVILQGD 219
MGLGKT+Q+I + Y E P +++VP S W E KW PE+ + ++Q
Sbjct: 1 MGLGKTIQAIG----ITYFYKEEWPLLIVVPSSLRYPWTEEIEKWIPELSPEEINVIQNK 56
Query: 220 KDFRKELIETKILTCNFDVLITSYEMVLKEKLTLKRFAWEYILIDEAHRIKNEQSALSQV 279
D R+ + +K+ + L+T+ L + L + F + +++DE+H +K+ + S++
Sbjct: 57 TDVRR-MSTSKVTVLGYG-LLTADAKTLIDALNNQNF--KVVIVDESHYMKSRNATRSRI 112
Query: 280 IRLFYSKNR--LLITGTP 295
+ K R +L+TGTP
Sbjct: 113 LLPIVQKARRAILLTGTP 130
>7295362 [L] KOG0298 DEAD box-containing helicase-like transcription
factor/DNA repair protein
Length = 1270
Score = 60.5 bits (145), Expect = 1e-08
Identities = 42/159 (26%), Positives = 71/159 (44%), Gaps = 8/159 (5%)
Query: 419 PYLFEGAEPGPPYTTDEHLVFNSGKMIVLDKLLKKKKEQGSRVLIFSQMSRLLDILEDYC 478
P L+ PG + ++ L +K + EQ ++++FSQ +L +
Sbjct: 1085 PQLYYSVRPGAHKSIIGDFSTKISSVVELVLKIKGENEQ-EKIIVFSQWQAILIEIARAL 1143
Query: 479 YFRGYEYCRIDGSTSHDERVEAIDEYNKPNSEKFIFLLTTRAGGLGINLVTADTVVLYDS 538
G ++ + T+ D D++ P S L+ G G+NL+ A V L +
Sbjct: 1144 SLNGIQFR--NKCTNKD-----FDDFKNPLSNVTCLLMPLSKGSKGLNLIEATHVFLVEP 1196
Query: 539 DWNPQADLQAMDRAHRIGQKKQVFVYRFVTENAIEEKVI 577
NP + QA+ R HR GQK+ V+RF+ IEE ++
Sbjct: 1197 ILNPGDERQAIGRIHRFGQKRPTKVHRFIVNETIEENIL 1235
>YLR247c [L] KOG0298 DEAD box-containing helicase-like transcription
factor/DNA repair protein
Length = 1556
Score = 58.5 bits (140), Expect = 5e-08
Identities = 40/138 (28%), Positives = 71/138 (50%), Gaps = 7/138 (5%)
Query: 444 MIVLDKLLKKKKEQGS----RVLIFSQMSRLLDILEDYCYFRGYEYCRIDGSTSHDERVE 499
+I L L+ K EQ + +V+++SQ + L ++ E+ +T++ E
Sbjct: 1361 VIKLISYLRLKSEQENADPPQVILYSQKTEYLKVIGKVLKLYHIEHLACLSNTANVG--E 1418
Query: 500 AIDEYNKPNSEKFIFLLTTRAGGLGINLVTADTVVLYDSDWNPQADLQAMDRAHRIGQKK 559
I+ + + S + LL + G G+NL+ A + L D N +LQAM R +RIGQ +
Sbjct: 1419 TINNFKRQPSVTCL-LLNVKTLGAGLNLINAKHIFLLDPILNNSDELQAMGRNNRIGQDE 1477
Query: 560 QVFVYRFVTENAIEEKVI 577
+ FV+ F+ N +EE ++
Sbjct: 1478 ETFVWNFMIRNTVEENIL 1495
Score = 55.5 bits (132), Expect = 4e-07
Identities = 69/326 (21%), Positives = 125/326 (38%), Gaps = 65/326 (19%)
Query: 157 GILADEMGLGKTLQSIS-FLGYLRYIKGIEGPYI--------------VIVPKSTLDNWQ 201
G+LA+EMGLGKT++ +S L R +K E +I +I P + L W
Sbjct: 387 GVLAEEMGLGKTIEILSLILLNRRKLKDSEATFIDDENRTITKTKTTLIICPNAILKQWL 446
Query: 202 REFAKWTPEVKTVILQGDKDFRKE---LIETKILTCNFDVLITSYEMVLKE--------- 249
E +K +G + K+ + E C +D+++TSY ++ E
Sbjct: 447 EEIELHANSLKWYTYRGYNEIMKDCKTVDEAVQQLCQYDIIVTSYNIIATEVHHAEFNRS 506
Query: 250 --KLTLKRFAWEY-----------ILIDEAHRIKNEQSALSQVIRLFYSKNRLLITGTPL 296
LK ++Y I++DE +++ + ++ L + + ++GTP+
Sbjct: 507 IRSRRLKSPKYDYSSPLALMQFYRIILDEVQMLRSSSTYSAKCTSLLHRIHTWGVSGTPI 566
Query: 297 QNNLHELWALLNFLLPDVFGDSEVFDEWFQQ------NGKEEDQEVVVQQLHSV------ 344
Q N++ ++++L F D F Q+ K+ V QL V
Sbjct: 567 Q-NIYNFRMIMSYLKLHPFCDEVDFIRTLQEEIKLRNEAKDYTSNDFVCQLKGVRFSIKD 625
Query: 345 ------LQPFLLRRVKSEVEKSLLPKKEINLYVGMTDMQIEW------YKSLLEKDIDAV 392
+R K+ V + ++ N + + IEW + + LE
Sbjct: 626 CMNIFYRYDLCIRHSKANVASQIHIPRQHNFIIPLEFAPIEWDNYLNLWNNFLELSGYNS 685
Query: 393 NGAVGKREGKTRLLNIVMQLRKCCNH 418
+G+ R L + +LR C H
Sbjct: 686 DGSGSPRVSNAFLNEWLSRLRYICCH 711
>Hs22054523 [L] KOG0298 DEAD box-containing helicase-like transcription
factor/DNA repair protein
Length = 1669
Score = 55.8 bits (133), Expect = 3e-07
Identities = 34/107 (31%), Positives = 54/107 (49%), Gaps = 4/107 (3%)
Query: 470 LLDILEDYCYFRGYEYCRIDGSTSHDERVEAIDEYNKPNSEKFIFLLTTRAGGLGINLVT 529
+LDI+ E+ +I + E + A K + + I LL G G+ ++
Sbjct: 1550 VLDIISKALTDNNMEFAQISRVKTFQENLSAF----KRDPQINILLLPLHTGSNGLTIIE 1605
Query: 530 ADTVVLYDSDWNPQADLQAMDRAHRIGQKKQVFVYRFVTENAIEEKV 576
A V+L + NP +LQA+ R HRIGQ K V+RF+ + IEE++
Sbjct: 1606 ATHVLLVEPILNPAHELQAIGRVHRIGQTKPTIVHRFLIKATIEERM 1652
>SPAC11E3.01c [R] KOG0391 SNF2 family DNA-dependent ATPase
Length = 193
Score = 52.8 bits (125), Expect = 3e-06
Identities = 23/47 (48%), Positives = 33/47 (69%)
Query: 548 AMDRAHRIGQKKQVFVYRFVTENAIEEKVIERAAQKLRLDQLVIQQG 594
A DR+HRIGQ + V +YR ++E +E ++ RA QK LD++VIQ G
Sbjct: 1 AQDRSHRIGQTRDVHIYRLISEYTVESNMLRRANQKRMLDKIVIQGG 47
Database: KOG eukaryal database 04/03
Posted date: Apr 14, 2003 1:07 PM
Number of letters in database: 30,389,216
Number of sequences in database: 60,738
Lambda K H
0.317 0.136 0.394
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 62,811,871
Number of Sequences: 60738
Number of extensions: 2764241
Number of successful extensions: 9086
Number of sequences better than 1.0e-05: 160
Number of HSP's better than 0.0 without gapping: 152
Number of HSP's successfully gapped in prelim test: 8
Number of HSP's that attempted gapping in prelim test: 8137
Number of HSP's gapped (non-prelim): 362
length of query: 1062
length of database: 30,389,216
effective HSP length: 117
effective length of query: 945
effective length of database: 23,282,870
effective search space: 22002312150
effective search space used: 22002312150
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)