ORF STATUS Function Best COG Functional category Pathways and functional systems
r_klactVI6712 good U KOG3724 Intracellular trafficking, secretion, and vesicular transport Negative regulator of COPII vesicle formation
Only best alignment is shown:
BLASTP 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= r_klactVI6712 2337881 2334957 -975
(975 letters)
Database: KOG eukaryal database 04/03
60,738 sequences; 30,389,216 total letters
Searching..................................................done
Color Key for Alignment Scores: 
Score E
Sequences producing significant alignments: (bits) Value
YFL025c [U] KOG3724 Negative regulator of COPII vesicle formation 800 0.0
SPAC824.02 [U] KOG3724 Negative regulator of COPII vesicle forma... 382 e-105
Hs13376494 [U] KOG3724 Negative regulator of COPII vesicle forma... 166 1e-40
At3g27325 [U] KOG3724 Negative regulator of COPII vesicle formation 155 3e-37
7290613 [U] KOG3724 Negative regulator of COPII vesicle formation 110 1e-23
CE06462 [U] KOG3724 Negative regulator of COPII vesicle formation 91 7e-18
>YFL025c [U] KOG3724 Negative regulator of COPII vesicle formation
Length = 1029
Score = 800 bits (2067), Expect = 0.0
Identities = 429/960 (44%), Positives = 627/960 (64%), Gaps = 43/960 (4%)
Query: 50 FSGSDTPKCRSIYMYPSYARIDGFDSRHTKLAKKYHLYLYREQGKDKEPKHGDEIQLDGI 109
F+G+D P+C SIYM+PSYARIDGFD R+T LA KYHLYLYREQ D+EP +GDE+QLDGI
Sbjct: 77 FNGADAPQCESIYMFPSYARIDGFDERYTPLAHKYHLYLYREQSVDREPLNGDELQLDGI 136
Query: 110 PVLFIPGNAGSFKQARSIAAASANLYFDH--KSTIQNSNAKNMDYFTADFNEDFTAFHGQ 167
PVLFIPGNAGSF+Q RSIA+A +N+YFD ++T++N N +N+D+FTADFNEDFTAFHG+
Sbjct: 137 PVLFIPGNAGSFRQCRSIASACSNIYFDSNTRATLRNENVRNLDFFTADFNEDFTAFHGE 196
Query: 168 TMLDQAVYLNDAVRYILSMYAQSAAYKESNRPLPKSVILLGHSMGGIVARLMLTLPNHIP 227
TMLDQA YLNDA++YILS+Y ++ Y P P+SVI++GHSMGGIV+R+MLTL NH+P
Sbjct: 197 TMLDQAEYLNDAIKYILSLYERTPDYPH---PKPQSVIIVGHSMGGIVSRVMLTLKNHVP 253
Query: 228 ESVNTILTLSSPHSTAPVTFDGDILKLYDRVNSYWTSAMNDMGSYFRNNVSVISITGGIL 287
S++TILTLSSPH+ +PVTFDGDILKLY N YW ++ S+F N+S++SITGGIL
Sbjct: 254 GSISTILTLSSPHAASPVTFDGDILKLYKNTNEYWRKQLSQNDSFFSKNISLVSITGGIL 313
Query: 288 DDILPADYTNLQGIVPESNGFTTFTTTIPELWTPIDHLAIVWCDQLRYLLAKYILEIVND 347
D LPADY +++ +V NGFT+FTTTIP++WTPIDHLAIVWC QLR +LA+ +LE ++
Sbjct: 314 DTTLPADYASVEDLVSLENGFTSFTTTIPDVWTPIDHLAIVWCKQLREVLARLLLESIDA 373
Query: 348 DAGGKTATLDIRMRKGRKFFLSGLERITDADKLID---KNLSAPAVD-FSDTESVPENHL 403
K L+ R++ RK LSG E + + ++ +NL + + FSD ++ N +
Sbjct: 374 SKPEKVKPLNQRLQIARKLLLSGFEDYSWMNSKLNYPQENLQEFSDNFFSDYATLEMNDV 433
Query: 404 L--VLNSSESMSTGYA-----FNISKSVDYSFEMLTSLVQFDIFFCKDI-YGKDCINGFS 455
L + + E Y NIS + F +LTSL I+FC + CI
Sbjct: 434 LDFEMFNLEKWHNNYTKINIPSNISSTEHLHFTLLTSLDMPMIYFCTESRVNLSCITAVD 493
Query: 456 SFSKVPHSTSLQKFPTDSSWGESVSPFRFISLNGSLLQGFQIIVF----------QGSMK 505
S VP S+ +F DSS+GE+ +PF+ +S+ ++LQ + ++ Q M+
Sbjct: 494 SILTVPRSSKDTQFAADSSFGEAKNPFKAVSVGKNILQKYDYLMISKPTYGEFSEQEGME 553
Query: 506 KKEDFVLAKYSDDKSIETASDGLWKLSLFPFRMSLKNKHSFVHGLAFPNLWSSLISFNLK 565
+ F+LA + +++ + ++ LF ++ L K ++F NLW SL+S+ L+
Sbjct: 554 DNQGFLLALLRNVSNVQIVNTTPSQILLFGEQLHLDGK-DIEQVISFSNLWDSLLSYKLE 612
Query: 566 TTF--SDE----IDSMFRPMMRQYVNNPYETKWHLLAASSSHEINMHNISPFIPLDDTID 619
T S+E +++F+P +RQ+V P+E+KWHL + S +INMHN++PFIPL+++
Sbjct: 613 TKIEASNEGIASEETLFQPFIRQWVYEPFESKWHLNIINKSLDINMHNVAPFIPLNESEP 672
Query: 620 KSLNLMFFIPPGEEISLRLSINWKLTLKMLYIRFRLAFASIPISIIALVLCYQFYYYDSP 679
+SL L FFIPPG + +++INW LTLKML+IR+RLA AS P++ IALVL YQFY+Y+
Sbjct: 673 RSLQLSFFIPPGMSLEAKMTINWSLTLKMLFIRYRLALASFPVAFIALVLSYQFYWYNK- 731
Query: 680 DSKFISFDTGLMNVLNNHSLLIFLFLSVGPIAINHKAILTLLHYLDPISLSKP--SSDSH 737
S+F SFD+ L +L H +L+F L + +N+K + +L+ LDP+ L+ P S+ +
Sbjct: 732 TSEFPSFDSTLGYILRKHGILMFFTLFLASPVVNNKLVQRILYLLDPVGLNYPFLLSERN 791
Query: 738 MLNNNYMLGLRETFVWWIGPVFFIISVALLFIILRLINVIEFAVIKISSAITRYTRITFP 797
M N Y LG+R+ F+ IG +F +++V LL ++ ++ +E VI + +++ + T
Sbjct: 792 MHANFYYLGIRDWFMSTIGILFGVMTVGLLALVSKIFGSLEILVIFLQRKLSK--KNTED 849
Query: 798 DPLNDMTHHKLLFNNRQLLGVCFISLGVMVYVPYQFAFILVSLIQMWNCMKLAVFTNRNN 857
D HK R + V + L V ++PYQ AF++ +IQ+ C+++A+ NN
Sbjct: 850 KEAFDTIEHKAYGKGRLMASVLLLLL-VFFHIPYQMAFVISLVIQIATCIRVALLKLSNN 908
Query: 858 AKYSNIHNYNVSFLMLTIFMIPINAPIVVVFLRNFAIRWETAFRSHHNFLAIAPTLLLTL 917
+ N+ NYN++ L+L +F+ IN PI++VFL N AI+WET+FRSHHN LA+AP + L
Sbjct: 909 EQKLNLLNYNMTLLLLLLFVSAINIPIIIVFLHNVAIKWETSFRSHHNILAVAPIIFLVG 968
Query: 918 RNSQCNIPIIKNRMNW--LIVVSILGYLSFYSFMYGIRNLYWVYHISNILNG-VLFFLTI 974
NS +P W + + + YL+ +SF+YGIRNLYW++H+ NI+ +LFF TI
Sbjct: 969 NNSIFKMPNSVPLDTWDGKVTIILFVYLTVFSFIYGIRNLYWIHHLVNIICAWLLFFETI 1028
>SPAC824.02 [U] KOG3724 Negative regulator of COPII vesicle formation
Length = 1142
Score = 382 bits (981), Expect = e-105
Identities = 301/1033 (29%), Positives = 500/1033 (48%), Gaps = 126/1033 (12%)
Query: 46 ISHNFSGSDTPK-CRSIYMYPSYARIDGFDSRHTKLAKKYHLYLYREQGKDKEPKHGDEI 104
I H+F G C Y++PSY R FD R+T+ A KY LYLYRE K + DE
Sbjct: 97 ILHSFQGRPQDNGCGKSYVWPSYVRFVDFDERYTRFANKYSLYLYRE----KSVEESDEP 152
Query: 105 QLDGIPVLFIPGNAGSFKQARSIAAASA----NLYFDHKSTIQNSNAKNMDYFTADFNED 160
GIP+LFIPGNAGS+KQ R+ AA +A N Y + N+ D+F DFNED
Sbjct: 153 S--GIPILFIPGNAGSYKQVRAFAAQAAHVYANAYAEDADGTLNAGKLVPDFFVVDFNED 210
Query: 161 FTAFHGQTMLDQAVYLNDAVRYILSMYAQ----SAAYKESNRPLPKSVILLGHSMGGIVA 216
F+AFHGQT+LDQA Y+NDA+ YILS+Y Q S+ Y P P SVILLGHSMGGIVA
Sbjct: 211 FSAFHGQTLLDQAEYVNDAIPYILSLYRQNRKISSEYDNEAFPPPTSVILLGHSMGGIVA 270
Query: 217 RLMLTLPNHIPESVNTILTLSSPHSTAPVTFDGDILKLYDRVNSYWT-SAMNDMGSYFRN 275
+ T+ N++ SVNT++TL++PH+ AP+ FD +++ Y+ + ++W+ S + +
Sbjct: 271 QATFTMKNYVDGSVNTLITLATPHAMAPLPFDRHLVEFYESIKNFWSQSFLLSPEENSLD 330
Query: 276 NVSVISITGGILDDILPADYTNLQGIVPESNGFTTFTTTIPELWTPIDHLAIVWCDQLRY 335
+V ++SI GG LD + +Y+++ VP SNG FT+ IP +W IDH A+ WC+ R
Sbjct: 331 DVLLVSIAGGGLDTHVVPEYSSISTFVPPSNGLMVFTSGIPSVWAEIDHQAMAWCENFRR 390
Query: 336 LLAKYILEIVNDDAGGKTATLDIRMRKGRKFFLSGLERITDADKLIDKNLSAPAVDFSDT 395
+L + I I++ T +L++R + ++ G D ++ A+D T
Sbjct: 391 VLIRGIFAIMDARTSKCTVSLNLRKELLSRAYIQGSSFQNDITQISKPIAQYKALDLDLT 450
Query: 396 ESVPE--NHLLVLNS-SESMSTGYAFNISK---SVDYSFEMLT------SLVQFDIFFCK 443
E LL LN S + F I K S+D FE+LT S + C+
Sbjct: 451 YVYSEMPGQLLFLNQLGVSYIRHHIFPIPKPTSSID-RFELLTDQPIDLSSSNIKVLACR 509
Query: 444 ------------------DIYGKDCINGFSSFSKVPHSTSLQKFPTDSSWGESVSPFRFI 485
+ +C + +P ST+ T S +G S + ++
Sbjct: 510 LDPKIDNTISALLENGNNKVINANCHLLRELVTLLPASTAY----TSSPYGGD-SFYNYV 564
Query: 486 SLNGSLLQGFQIIVFQGSMKKKEDFVLAKYS----DDKSIETASDGLWKLSLFPFRMSLK 541
+ I+V S FV+ +S D K+I+ + L+K +
Sbjct: 565 LPKEKMDDYHFILVSDDSKAPASGFVVGGFSNVSLDPKTIKGSQIELFKSGR---KFQFD 621
Query: 542 NKHSFVHGLAFPNLWSSLISFNLKTTFSDEIDSM----FRPMMRQYVNNPYETKWHLLAA 597
K S FP + SS++++ + T+ ++ F PM++Q + +P+ETK+H+
Sbjct: 622 TKGSISKRFRFPGIQSSIMAYTISVTYELYPGAVPQKEFTPMLKQSIESPFETKYHV--N 679
Query: 598 SSSHEINMHNISPFIP-LDDTIDKSLNLMFFIPPGEEISLRLSI--NWKLTLKMLYIRFR 654
S+ E+++H ISPF+ +KSL L FF+ P S+ +SI ++ + L +R+R
Sbjct: 680 MSNTELSVHGISPFMEFFGKESEKSLTLEFFLNPAIYKSVYVSIQPSYYRSAGRLLMRYR 739
Query: 655 LAFASIPISIIALVLCYQFYYYDSPDSKFISFDTGLMNVLNNHSLLIFLFLSVGPIAINH 714
AS P+ +I+L QF Y+ S ++S L ++ + + +S+ IA ++
Sbjct: 740 TLLASFPVVVISLAAYNQFRYFHY-GSAYLSMSAALEVMIRKGLIKLLFLVSILSIAFSY 798
Query: 715 ---KAILTLLHYLDPISLSKPSS----DSHMLNNNYMLGLRETFVWWIGPVFFIISVALL 767
+ L + DP++ K + S N+ + GL+ W++ P+ ++ V L+
Sbjct: 799 LISRVELIVADGADPVASWKIFAMMVPKSFWKQNHLLFGLQTAQFWFLAPLLTLMFVGLV 858
Query: 768 F----IILRLINVIEF-----------------AVIKISSAI--TRYTRI----TFPDPL 800
IIL +++++ F +K S TR TR F
Sbjct: 859 ITASVIILCVMHLLAFIYGIYLRYKGLTFTGVCQAVKFSFQCLRTRNTRKLDHGEFKKLS 918
Query: 801 NDMTHHKLLFNN-------------RQLLGVCFISLGVMVYVPYQFAF---ILVSLIQMW 844
+ ++ + + N +++G+ + L M VP+Q + + +
Sbjct: 919 SFLSQRNMYYANPSLCYVYGKKHMQARIIGIMLLLLMAMTVVPFQLVYGVALCTQTVTTA 978
Query: 845 NCMKLAVFTNRNN---AKYSNIHNYNVSFLMLTIFMIPINAPIVVVFLRNFAIRWETAFR 901
+ LA F +++ K + +N++ + +L + + P++ P+++V+ RN ++ W F
Sbjct: 979 KALHLARFCTKSSHYRKKLWDFYNFSCTITILMLLLAPLDFPVLIVWARNLSMHWSIPFP 1038
Query: 902 SHHNFLAIAPTLLLT--LRNSQCNIPIIKNRMNWLIVVSILGYLSFYSFMYGIRNLYWVY 959
+HHNF +I P +LLT LR + +P + N + + I L LSFYS +YG Y ++
Sbjct: 1039 THHNFFSIIPFILLTEILRTGKM-LPRL-NDVEYYINNVFLFLLSFYSLIYGAEKPYLIH 1096
Query: 960 HISNILNGVLFFL 972
++ + L FL
Sbjct: 1097 NVVGLYFFWLLFL 1109
>Hs13376494 [U] KOG3724 Negative regulator of COPII vesicle formation
Length = 592
Score = 166 bits (421), Expect = 1e-40
Identities = 150/573 (26%), Positives = 262/573 (45%), Gaps = 69/573 (12%)
Query: 50 FSGSDTPKCRSIYM--YPSYARIDGFDSRHTKLAKKY---HLYLYREQGKDKEPKHGDEI 104
F G + KC YM YP Y +I+ KLAK+Y LYLY E +E K +
Sbjct: 29 FFGFEENKCSMSYMFEYPEYQKIE----LPKKLAKRYPAYELYLYGEGSYAEEHKI---L 81
Query: 105 QLDGIPVLFIPGNAGSFKQARSIAAASANLYFDHKSTIQNSNAKNMDYFTADFNEDFTAF 164
L GIPVLF+PGNAGS+KQ RSI + + D + D+F+ +FNE+ A
Sbjct: 82 PLTGIPVLFLPGNAGSYKQVRSIGSIALRKAEDIDFKY------HFDFFSVNFNEELVAL 135
Query: 165 HGQTMLDQAVYLNDAVRYILSMYAQSAAYKESNRPLPKSVILLGHSMGGIVARLMLTLPN 224
+G ++ Q ++++ ++ IL +Y + PKSV ++GHSMGG+VAR +LTL N
Sbjct: 136 YGGSLQKQTKFVHECIKTILKLY-------KGQEFAPKSVAIIGHSMGGLVARALLTLKN 188
Query: 225 HIPESVNTILTLSSPHSTAPVTFDGDILKLYDRVNSYWTSAMNDMGSYFRNNVSVISITG 284
+ +N ++T ++PH + D I Y VN+YW + N++ +S+ G
Sbjct: 189 FKHDLINLLITQATPHVAPVMPLDRFITDFYTTVNNYWILNARHI------NLTTLSVAG 242
Query: 285 GILDDILPADYTNLQGIVPESNGFTTFTTTIPELWTPIDHLAIVWCDQLRYLLAKYILEI 344
G D + + T L + ++ + ++ +P+ W DHL+IVWC QL+ + ++
Sbjct: 243 GFRDYQVRSGLTFLPKLSHHTSALSVVSSAVPKTWVSTDHLSIVWCKQLQLTTVRAFFDL 302
Query: 345 VNDDAGGKTATLDIRMRKGRKFFLSGLERITDADKLIDKNLSAPAVDFSDTESVPENHLL 404
+ D T I +K + I K ++N PA+ SD L+
Sbjct: 303 IGAD------TKQITQNSKKKLSVLYHHFIRHPSKHFEEN---PAI-ISDLTGTSMWVLV 352
Query: 405 VLNSSESMSTGYAFNISKSVDYSFEMLTSLVQFDIFFCKDIYGKDCINGFSSFSKVPHST 464
+ S T A+N S+ + ++F + + +C+ ++ S +ST
Sbjct: 353 KV----SKWTYVAYNESEKIYFTFPLENHRKIYTHVYCQ----STMLDTNSWIFACINST 404
Query: 465 SLQKFPTDSSWGESVSP-FRFISLNGSLLQGF----QIIVFQGSMKKKEDFVLAKY--SD 517
S+ D SW + P ++++L LQ + ++V+ S++ + V ++ +
Sbjct: 405 SMCLQGVDLSWKAELLPTIKYLTLR---LQDYPSLSHLVVYVPSVRGSKFVVDCEFFKKE 461
Query: 518 DKSIETASDGLWKLSLFPFRMSLKNKHSFVHGLAFPNLWSSLISFNLK-----TTFSDEI 572
+ I+ L+ L ++ L N + + L N +F + + +EI
Sbjct: 462 KRYIQLPVTHLFSFGLSSRKVVL-NTNGLYYNLELLNFGQIYQAFKINVVSKCSAVKEEI 520
Query: 573 DSMFRPMMRQYVNNPYETKWHLLAASSSHEINM 605
S++ R ++ YE + A SS EI++
Sbjct: 521 TSIY----RLHIPWSYEDSLTIAQAPSSTEISL 549
>At3g27325 [U] KOG3724 Negative regulator of COPII vesicle formation
Length = 1048
Score = 155 bits (392), Expect = 3e-37
Identities = 109/344 (31%), Positives = 163/344 (46%), Gaps = 45/344 (13%)
Query: 58 CRSIYMYPSYARIDGFDSRHTKLAKKYHLYLYREQGKDKEPKHGDEIQLDGIPVLFIPGN 117
C YMYP+Y I D +Y LYLY E + + K + +L G+PVLFIPGN
Sbjct: 42 CTMTYMYPTYIPISVTDDT---TPGRYGLYLYHEGWRKIDFKEHLK-KLSGVPVLFIPGN 97
Query: 118 AGSFKQARSIAAAS---------ANLYFDHKSTIQNSNA--------------KNMDYFT 154
AGS+KQ RS+AA S ++ S ++ A +D+F
Sbjct: 98 AGSYKQVRSVAAESDRAFQGGPFERTFYQEASLLRGGGADTESVDYDLPSQYSNRLDWFA 157
Query: 155 ADFNEDFTAFHGQTMLDQAVYLNDAVR-----YILSMYAQSAAYKE-----SNRPLPKSV 204
D + +A G+ + + Y+ A+ IL Y +S +E ++ LP V
Sbjct: 158 VDLEGEHSAMDGRILEEHTEYVVYAIHRVGILIILDQYKESHDTREREGAAASSKLPHDV 217
Query: 205 ILLGHSMGGIVARLMLTLPNHIPESVNTILTLSSPHSTAPVTFDGDILKLYDRVNSYWTS 264
IL+GHSMGG VAR P +V TILTLSSPH + P+ + + +VN W
Sbjct: 218 ILVGHSMGGFVARAAAVHPRLRKSAVQTILTLSSPHQSPPLALQPSLGHYFAQVNREWKK 277
Query: 265 AMNDMGSYFRNNVS--------VISITGGILDDILPADYTNLQGIVPESNGFTTFTTTIP 316
S N VS V+SI+GG D + + +L GIVP S+GF +T++
Sbjct: 278 GYEVQTSPGGNYVSDPLLSGVVVVSISGGYNDYQVRSKLESLDGIVPSSHGFMISSTSMT 337
Query: 317 ELWTPIDHLAIVWCDQLRYLLAKYILEIVNDDAGGKTATLDIRM 360
+W ++H AI+WC+QL ++ +L +V+ + D R+
Sbjct: 338 NVWLSMEHQAILWCNQLVVQVSHTLLSMVDSKTNQPFSDTDKRL 381
>7290613 [U] KOG3724 Negative regulator of COPII vesicle formation
Length = 999
Score = 110 bits (274), Expect = 1e-23
Identities = 80/287 (27%), Positives = 138/287 (47%), Gaps = 48/287 (16%)
Query: 84 YHLYLYREQGKDKEPKHGDEIQLDGIPVLFIPGNAGSFKQARSIAAASANLYFDHKSTIQ 143
Y LY Y E + +P + ++ G PV+F+PGNAGS+KQ RS+A+ + + +
Sbjct: 79 YALYYYYEGLR--QPLDPLKRRMTGAPVIFVPGNAGSYKQVRSLASVAL------RKAMS 130
Query: 144 NSNAKNMDYFTADFNEDFTAFHGQTMLDQAVYLNDAVRYILSMYAQSAAYKESNRPLPKS 203
N ++DY+T D++E+ +A +G + Q YL +R ILS+Y R S
Sbjct: 131 NDAGIHLDYYTIDYDEELSALYGGYLHRQQSYLKLCIRTILSIY--------EGRTEQPS 182
Query: 204 VILLGHSMGGIVARLMLTLPNHIPESVNTILTLSSPHSTAPVTFDGDILKLYDRVNSYWT 263
++L+GHSMGG +A+ +L P I + +NTI+++S+P + D + + YD+ ++ +
Sbjct: 183 IVLIGHSMGGKLAQSVLVDPA-IGQHINTIISISTPLDQPVLNLDTQLEEFYDQTDAVLS 241
Query: 264 SA-------------------------MNDMGSYFR-NNVSVISITGGILDDILPADYTN 297
M S R +NV +IS GG D ++ T+
Sbjct: 242 KLRTATVPTMTTNVCDSLHQRPPSVQRMASQDSSARLDNVLLISTGGGNRDLLVRPGLTS 301
Query: 298 LQGIVPESNGFTTFTTTIPELWTPIDHLAIVWCDQLRYLLAKYILEI 344
+ N T+ IP++ DHL+ VWC Q + +++ +
Sbjct: 302 SR-----FNDLHAMTSAIPKVSLSCDHLSAVWCLQFMQAINRFLFSV 343
>CE06462 [U] KOG3724 Negative regulator of COPII vesicle formation
Length = 733
Score = 91.3 bits (225), Expect = 7e-18
Identities = 70/240 (29%), Positives = 116/240 (48%), Gaps = 34/240 (14%)
Query: 104 IQLDGIPVLFIPGNAGSFKQARSIAAASANLYFDHKSTIQNSNAKNMDYFTADFNEDFTA 163
I+ IPVLFIPG+ GS KQ RS+A+ N T + +F DF+E+ T
Sbjct: 91 IEAGQIPVLFIPGSQGSGKQIRSLASVMQN------KTEMRYAPFSFRFFAVDFDEEMTF 144
Query: 164 FHGQTMLDQAVYLNDAVRYILSMYAQSAAYKESNRPLPKSVILLGHSMGGIVARLMLTLP 223
+G + Q Y+ A+R I SM + + ++L+GHS GG++A L P
Sbjct: 145 MNGHIVKRQIEYVMKAIRKIQSMMRGN-----------RKIVLVGHSYGGMIALLTTIYP 193
Query: 224 NHIPESVNTILTLSSPHSTAPVTFDGDILKLYDRVNSYWTSAMNDMGSYFRNNVSVISIT 283
+ + V I+ +P + P+ D L+ + + W + N+ S+ V V++ +
Sbjct: 194 EY-QKDVELIIVKGAPLNKQPLVNDWFSLRFNLLLVNQWNALQNNNLSH----VGVVAYS 248
Query: 284 GGILDDILPADYTNLQG----IVPESNGFTTFTTTIPELWT-------PIDHLAIVWCDQ 332
GGI D ++P +++ L+ I+ + F+ T P LW DHLAI+WC++
Sbjct: 249 GGIRDYMIPDEWSILRNVRAVIMKVTIKFSAQVTNRP-LWAIDGVSDLGADHLAILWCNE 307
Database: KOG eukaryal database 04/03
Posted date: Apr 14, 2003 1:07 PM
Number of letters in database: 30,389,216
Number of sequences in database: 60,738
Lambda K H
0.325 0.139 0.418
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 56,996,850
Number of Sequences: 60738
Number of extensions: 2446284
Number of successful extensions: 7619
Number of sequences better than 1.0e-05: 6
Number of HSP's better than 0.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 7579
Number of HSP's gapped (non-prelim): 10
length of query: 975
length of database: 30,389,216
effective HSP length: 116
effective length of query: 859
effective length of database: 23,343,608
effective search space: 20052159272
effective search space used: 20052159272
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)