ORF STATUS Function Best COG Functional category Pathways and functional systems
r_klactVI6793 good U KOG0937 Intracellular trafficking, secretion, and vesicular transport Adaptor complexes medium subunit family
Only best alignment is shown:
BLASTP 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= r_klactVI6793 2366957 2365437 -507
(507 letters)
Database: KOG eukaryal database 04/03
60,738 sequences; 30,389,216 total letters
Searching..................................................done
Color Key for Alignment Scores: 
Score E
Sequences producing significant alignments: (bits) Value
YHL019c [U] KOG0937 Adaptor complexes medium subunit family 305 1e-82
SPBP16F5.07 [U] KOG0937 Adaptor complexes medium subunit family 178 1e-44
Hs14210504 [U] KOG0937 Adaptor complexes medium subunit family 177 4e-44
7299202 [U] KOG0937 Adaptor complexes medium subunit family 174 2e-43
Hs9506797 [U] KOG0937 Adaptor complexes medium subunit family 173 6e-43
At1g60780 [U] KOG0937 Adaptor complexes medium subunit family 166 6e-41
YPL259c [U] KOG0937 Adaptor complexes medium subunit family 166 1e-40
CE11129 [U] KOG0937 Adaptor complexes medium subunit family 164 4e-40
At1g10730 [U] KOG0937 Adaptor complexes medium subunit family 158 2e-38
CE28050 [U] KOG0937 Adaptor complexes medium subunit family 155 1e-37
CE28642 [U] KOG0938 Adaptor complexes medium subunit family 138 2e-32
Hs14917109 [U] KOG0938 Adaptor complexes medium subunit family 135 2e-31
7300861 [U] KOG0938 Adaptor complexes medium subunit family 132 2e-30
At5g46630 [U] KOG0938 Adaptor complexes medium subunit family 128 2e-29
SPAC31A2.09c [U] KOG0938 Adaptor complexes medium subunit family 122 2e-27
At4g24550 [U] KOG0937 Adaptor complexes medium subunit family 112 2e-24
Hs6912240 [U] KOG2740 Clathrin-associated protein medium chain 96 1e-19
CE04654 [U] KOG2740 Clathrin-associated protein medium chain 92 2e-18
7290785 [U] KOG2740 Clathrin-associated protein medium chain 91 4e-18
Hs5803000 [U] KOG2740 Clathrin-associated protein medium chain 91 5e-18
At1g56590 [U] KOG2740 Clathrin-associated protein medium chain 89 2e-17
Hs14917111 [U] KOG0937 Adaptor complexes medium subunit family 82 1e-15
YOL062c [U] KOG0938 Adaptor complexes medium subunit family 77 5e-14
SPBC651.11c [U] KOG2740 Clathrin-associated protein medium chain 62 3e-09
YBR288c [U] KOG2740 Clathrin-associated protein medium chain 58 4e-08
Hs17461156 [U] KOG0937 Adaptor complexes medium subunit family 57 9e-08
>YHL019c [U] KOG0937 Adaptor complexes medium subunit family
Length = 605
Score = 305 bits (781), Expect = 1e-82
Identities = 160/404 (39%), Positives = 247/404 (60%), Gaps = 49/404 (12%)
Query: 138 VEVIKPDDDSENTASEK--HELPPGDQDETFINSYILRTMTSAVSWRPKGIHYGKNEFFL 195
VE +K ++N ++ ++ P D ++ +IN I +T+ +SWR KGIHY KNEFFL
Sbjct: 215 VETVKETLRNKNDTGKEAANDELPNDGNDLYINGDIAKTIIMPISWRTKGIHYAKNEFFL 274
Query: 196 DVIEKLEFIMDFEEGVVRNNVINGTIICRSYLSGMPQLSIGLNKLMQKNVHFMKRLKFHE 255
DVIE+++++MDFE+GV+R N+I+G I+CR YLSGMP+L I +NK++ ++ FM FH+
Sbjct: 275 DVIERVQYLMDFEKGVIRKNLIHGEIVCRCYLSGMPKLKISINKILNRDPQFMSNSSFHQ 334
Query: 256 CVDL---HTLIKEE---------------SPVIKFIPPDGEFELCNYKLNRPLLDEPVIK 297
CV L +T+ K+E + I+FIPPDGEF LC Y+L R + D P+++
Sbjct: 335 CVSLDSINTIEKDEEKNSDDDAGLQAATDAREIEFIPPDGEFVLCQYELKRHVKDAPMVR 394
Query: 298 LQSFGLSQKPRKNQETQDKLLLKAAITTHFKAQDSAKELLIKIPIKSVIRKWNIDLEKPP 357
L+ F + K +K K+ + I T+FK +S +L ++IP+ V +++ IDL K
Sbjct: 395 LKDFEIKPKLKK-----FKIQIVTKIQTNFKPTNSTSKLNVRIPLTKVFQEYKIDLSKQI 449
Query: 358 LFKSDIGDVVFDITAGSIIWKINNLKG----------------GHGNKNYGLKCMFEIWD 401
FK++IG VVF+++ ++W+I +KG N + F +++
Sbjct: 450 RFKANIGKVVFNLSDDFLLWEIQTMKGHREHSTNKSSQYNSDEDDPNTCASMVAEFPLFN 509
Query: 402 RQIHEALEVQLRNSMDPPPLRTGPKLERIWDQYHGKTTEYDGNENQKEDVDKFALIAMSF 461
++ ++ L+ +++ SM+PPPLRTGP+LE ++ Q H + T + ++ L+ + F
Sbjct: 510 QEEYDRLQEEMKTSMNPPPLRTGPRLEELYRQVHDQQTSHVTPRDK--------LVNIDF 561
Query: 462 EIPYYAVSGLKVEYFKIEEPQLNYQSFPWVRYKTVNDNEYIYQV 505
EIPY SGLKVEY K+EEPQL YQSFPWVRYKTV+D EY Y V
Sbjct: 562 EIPYCTCSGLKVEYLKVEEPQLQYQSFPWVRYKTVSDEEYAYIV 605
Score = 86.7 bits (213), Expect = 8e-17
Identities = 52/176 (29%), Positives = 95/176 (53%), Gaps = 10/176 (5%)
Query: 1 MSSCFLLLDETYEPLIRRALRPIHFLDDAILQLQNNLKHHKGCTKPIFEGNGWHYAVITR 60
MSS +LDE EPL+ + +R + L + + +H G + PI N W + + R
Sbjct: 1 MSSSLFILDENLEPLVSKNIRALPNLSSVLSSFKQC--YHDG-SPPILSQNDWFFIHLKR 57
Query: 61 DNLYFAMIMQVNN--SVSPISVLHYLDEIYQLCRKFMGMK-LNKLNVRDNFHLIFEVIEE 117
D L+F ++ + ++ +++L +L++ Y L +K+ ++ L K + DN L+ E+I+E
Sbjct: 58 DFLHFVSVIHTTDKPNIDLMTILAFLEQFYHLLQKYFEIEVLTKNVILDNILLVLELIDE 117
Query: 118 SSDYGIIQVTNYNIIHDFIKVEVIKP----DDDSENTASEKHELPPGDQDETFINS 169
D+GI+QVT+ +II D+I+V+V P D++ + E D D + N+
Sbjct: 118 CIDFGIVQVTDPSIIKDYIRVKVNVPRVTVDNEEWSPGEESSSSSGSDSDSEYSNT 173
>SPBP16F5.07 [U] KOG0937 Adaptor complexes medium subunit family
Length = 426
Score = 178 bits (452), Expect = 1e-44
Identities = 140/513 (27%), Positives = 241/513 (46%), Gaps = 103/513 (20%)
Query: 1 MSSCFLLLDETYEPLIRRALR---PIHFLDDAILQLQNNLKHHKGCTKPIFEGNGWHYAV 57
M+S +L+ + +I R R P+ ++ L L++ ++ +G + P G +Y
Sbjct: 1 MASAIFVLNLKGKVIISRDYRADIPMSVVEK-FLPLKSEVEEEQGFSTPCLTHEGINYIY 59
Query: 58 ITRDNLYFAMIMQVNNSVSPISVLHYLDEIYQLCRKFMGMKLNKLNVRDNFHLIFEVIEE 117
I +++Y + ++N+ + +L +L ++ + + +L + ++RDNF L++E+++E
Sbjct: 60 IHHNDVYLLALSKMNSDA--MEMLVFLRKMADVFIDYF-KELQEESIRDNFVLVYELLDE 116
Query: 118 SSDYGIIQVTNYNIIHDFIKVEVIKPDDDSENTASEKHELPPGDQDETFINSYILRTMTS 177
D+G Q T I+ ++I + NT +KH PP MT+
Sbjct: 117 IMDFGFPQTTETKILQEYIT--------QTSNTV-KKHAPPP-------------IAMTN 154
Query: 178 AVSWRPKGIHYGKNEFFLDVIEKLEFIMDFEEGVVRNNVINGTIICRSYLSGMPQLSIGL 237
A+SWR +GIHY KNE FLDVIE + I + V+++ ++ G + + YLSGMP+L +GL
Sbjct: 155 AISWRSEGIHYRKNEVFLDVIESVNLIAAADGTVIQSEIL-GKVRLKCYLSGMPELRLGL 213
Query: 238 N---------KLMQKNVHFMKRLKFHECVDLHTLIKEESPVIKFIPPDGEFELCNYKLNR 288
N + ++ N M+ +KFH+CV L E I FIPPDGEF+L +Y+++
Sbjct: 214 NDKVLFEAAGRTIKGNTVEMEDVKFHQCVRLARF--ENDRTISFIPPDGEFDLMSYRMSS 271
Query: 289 PLLDEPVIKLQSFGLSQKPRKNQETQDKLLLKAAITTHFKAQDSAKELLIKIPIKSVIRK 348
+ P+I ++ + + ++ + ++KA FK + A + I IP+
Sbjct: 272 NV--RPLIWVECESI-----VHSGSRIEFMVKA--KAQFKKRCIANNVQIIIPVPE---- 318
Query: 349 WNIDLEKPPLFKSDIGDVVFDITAGSIIWKINNLKGGHGNKNYGLKCMFEIWDRQIHEAL 408
D + P F++ G V + +++W I GG
Sbjct: 319 ---DADS-PRFQTSNGHVQYAPEQAAMVWNIKKFAGGK---------------------- 352
Query: 409 EVQLRNSMDPPPLRTGPKLERIWDQYHGKTTEYDGNENQKEDVDKFALIAMSFEIPYYAV 468
E +R M P ++ N+ V K + + F IPY+
Sbjct: 353 EFFMRAEMGLPSVK-----------------------NEDIQVQKKRPVQLKFAIPYFTT 389
Query: 469 SGLKVEYFKIEEPQLNYQSFPWVRYKTVNDNEY 501
SG++V Y KI EP+LNY + PWVRY T N EY
Sbjct: 390 SGIQVRYLKITEPKLNYHAMPWVRYVTQNGTEY 422
>Hs14210504 [U] KOG0937 Adaptor complexes medium subunit family
Length = 423
Score = 177 bits (448), Expect = 4e-44
Identities = 141/469 (30%), Positives = 224/469 (47%), Gaps = 102/469 (21%)
Query: 38 KHHKGCTKPIFEGNGWHYAVITRDNLYFAMIMQVNNSVSPISVLHYLDEIYQLCRKFMGM 97
K +G PI G + I +NLY + N VS V +L ++ Q+ ++
Sbjct: 40 KEEEGMLSPILAHGGVRFMWIKHNNLYLVATSKKNACVS--LVFSFLYKVVQVFSEYF-K 96
Query: 98 KLNKLNVRDNFHLIFEVIEESSDYGIIQVTNYNIIHDFIKVEVIKPDDDSENTASEKHEL 157
+L + ++RDNF +I+E+++E D+G Q T+ I+ ++I E K + +
Sbjct: 97 ELEEESIRDNFVIIYELLDELMDFGYPQTTDSKILQEYITQEGHKLETGAPR-------- 148
Query: 158 PPGDQDETFINSYILRTMTSAVSWRPKGIHYGKNEFFLDVIEKLEFIMDFEEGVVRNNVI 217
PP T+T+AVSWR +GI Y KNE FLDVIE + ++ V+R+ ++
Sbjct: 149 PPA-------------TVTNAVSWRSEGIKYRKNEVFLDVIESVNLLVSANGNVLRSEIV 195
Query: 218 NGTIICRSYLSGMPQLSIGLNKLM---------QKNVHFMKRLKFHECVDLHTLIKEESP 268
G+I R +LSGMP+L +GLN + K+V ++ +KFH+CV L E
Sbjct: 196 -GSIKMRVFLSGMPELRLGLNDKVLFDNTGRGKSKSVE-LEDVKFHQCVRLSRF--ENDR 251
Query: 269 VIKFIPPDGEFELCNYKLNRPLLDEPVIKLQSFGLSQKPRKNQETQDKLLLKAAITTHFK 328
I FIPPDGEFEL +Y+LN + +P+I ++S K+ ++ + ++KA + FK
Sbjct: 252 TISFIPPDGEFELMSYRLNTHV--KPLIWIESV-----IEKHSHSRIEYMIKA--KSQFK 302
Query: 329 AQDSAKELLIKIPIKSVIRKWNIDLEKPPLFKSDIGDVVFDITAGSIIWKINNLKGGHGN 388
+ +A + I IP+ + D + P FK+ +G V + I+W I + GG
Sbjct: 303 RRSTANNVEIHIPVPN-------DADSPK-FKTTVGSVKWVPENSEIVWSIKSFPGG--- 351
Query: 389 KNYGLKCMFEIWDRQIHEALEVQLRNSMDPPPLRTGPKLERIWDQYHGKTTEYDGNENQK 448
K Y ++ F + P +E
Sbjct: 352 KEYLMRAHFGL-------------------------PSVE-------------------A 367
Query: 449 EDVDKFALIAMSFEIPYYAVSGLKVEYFKIEEPQLNYQSFPWVRYKTVN 497
ED + I++ FEIPY+ SG++V Y KI E + YQ+ PWVRY T N
Sbjct: 368 EDKEGKPPISVKFEIPYFTTSGIQVRYLKIIE-KSGYQALPWVRYITQN 415
>7299202 [U] KOG0937 Adaptor complexes medium subunit family
Length = 426
Score = 174 bits (442), Expect = 2e-43
Identities = 152/508 (29%), Positives = 239/508 (46%), Gaps = 104/508 (20%)
Query: 2 SSCFLLLDETYEPLIRRALRPIHFLDDAILQLQNNL---KHHKGCTKPIFEGNGWHYAVI 58
SS +LD + LI R R + +D A++ L + +G PI + +A I
Sbjct: 3 SSAIFVLDVKGKVLISRNYRGDN-IDMAVIDKFMPLLMEREEEGLITPILQTAETTFAYI 61
Query: 59 TRDNLYFAMIMQVNNSVSPISVLHYLDEIYQLCRKFMGMKLNKLNVRDNFHLIFEVIEES 118
+NLY N +V+ V +L +I Q+ ++ +L + ++RDNF +I+E+++E
Sbjct: 62 KTNNLYIVSTTPRNKNVNIALVFVFLHKIAQVFVEYF-KELEEESIRDNFVIIYELLDEL 120
Query: 119 SDYGIIQVTNYNIIHDFIKVEVIKPDDDSENTASEKHELPPGDQDETFINSYILRTMTSA 178
D+G Q T+ I+ ++I E K EL P I +T+A
Sbjct: 121 LDFGYPQTTDSKILQEYITQE------------GHKLELQPR----------IPVAVTNA 158
Query: 179 VSWRPKGIHYGKNEFFLDVIEKLEFIMDFEEGVVRNNVINGTIICRSYLSGMPQLSIGLN 238
VSWR +GI Y KNE FLDVIE + + + V+R+ ++ G I R YLSGMP+L +GLN
Sbjct: 159 VSWRSEGIKYRKNEVFLDVIESVNLLANANGNVLRSEIV-GAIKMRVYLSGMPELRLGLN 217
Query: 239 KLM---------QKNVHFMKRLKFHECVDLHTLIKEESPVIKFIPPDGEFELCNYKLNRP 289
+ K+V ++ +KFH+CV L E I FIPPDGEFEL +Y+LN
Sbjct: 218 DKVLFESTGRGKSKSVE-LEDVKFHQCVRLSRF--ENDRTISFIPPDGEFELMSYRLNTH 274
Query: 290 LLDEPVIKLQSFGLSQKPRKNQETQDKLLLKAAITTHFKAQDSAKELLIKIPIKSVIRKW 349
+ +P+I ++S ++ ++ + ++KA + FK + +A + I IP+ +
Sbjct: 275 V--KPLIWIESV-----IERHAHSRVEYMIKA--KSQFKRRSTANNVEIVIPVPA----- 320
Query: 350 NIDLEKPPLFKSDIGDVVFDITAGSIIWKINNLKGGHGNKNYGLKCMFEIWDRQIHEALE 409
D + P FK+ IG + +IIW I + GG K Y ++ F + ++E
Sbjct: 321 --DADSPK-FKTTIGSCKYAPEQNAIIWTIKSFPGG---KEYLMRAHFGL------PSVE 368
Query: 410 VQLRNSMDPPPLRTGPKLERIWDQYHGKTTEYDGNENQKEDVDKFALIAMSFEIPYYAVS 469
+ PP I + FEIPY+ S
Sbjct: 369 SEDNTEGKPP-------------------------------------IQVRFEIPYFTTS 391
Query: 470 GLKVEYFKIEEPQLNYQSFPWVRYKTVN 497
G++V Y KI E + YQ+ PWVRY T N
Sbjct: 392 GIQVRYLKIIE-KSGYQALPWVRYITQN 418
>Hs9506797 [U] KOG0937 Adaptor complexes medium subunit family
Length = 423
Score = 173 bits (438), Expect = 6e-43
Identities = 144/509 (28%), Positives = 240/509 (46%), Gaps = 113/509 (22%)
Query: 2 SSCFLLLDETYEPLIRRALRPIHFLDDAILQLQNNL-----KHHKGCTKPIFEGNGWHYA 56
+S +LD +PLI R + D A+ ++++ + + +G P+ H+
Sbjct: 3 ASAVFILDVKGKPLISRNYKG----DVAMSKIEHFMPLLVQREEEGALAPLLSHGQVHFL 58
Query: 57 VITRDNLYFAMIMQVNNSVSPI-SVLHYLDEIYQLCRKFMGMKLNKLNVRDNFHLIFEVI 115
I NLY N + S + S L+ E++ C F +L + ++RDNF +++E++
Sbjct: 59 WIKHSNLYLVATTSKNANASLVYSFLYKTIEVF--CEYFK--ELEEESIRDNFVIVYELL 114
Query: 116 EESSDYGIIQVTNYNIIHDFIKVEVIKPDDDSENTASEKHELPPGDQDETFINSYILRTM 175
+E D+G Q T+ I+ ++I + S + K +PP T+
Sbjct: 115 DELMDFGFPQTTDSKILQEYITQQ-------SNKLETGKSRVPP--------------TV 153
Query: 176 TSAVSWRPKGIHYGKNEFFLDVIEKLEFIMDFEEGVVRNNVINGTIICRSYLSGMPQLSI 235
T+AVSWR +GI Y KNE F+DVIE + +++ V+ + ++ GTI + +LSGMP+L +
Sbjct: 154 TNAVSWRSEGIKYKKNEVFIDVIESVNLLVNANGSVLLSEIV-GTIKLKVFLSGMPELRL 212
Query: 236 GLN---------KLMQKNVHFMKRLKFHECVDLHTLIKEESPVIKFIPPDGEFELCNYKL 286
GLN + K+V ++ +KFH+CV L + I FIPPDG+FEL +Y+L
Sbjct: 213 GLNDRVLFELTGRSKNKSVE-LEDVKFHQCVRLSRF--DNDRTISFIPPDGDFELMSYRL 269
Query: 287 NRPLLDEPVIKLQSFGLSQKPRKNQETQDKLLLKAAITTHFKAQDSAKELLIKIPIKSVI 346
+ + +P+I ++S K ++ ++++KA FK Q A + I +P+ S
Sbjct: 270 STQV--KPLIWIESV-----IEKFSHSRVEIMVKA--KGQFKKQSVANGVEISVPVPS-- 318
Query: 347 RKWNIDLEKPPLFKSDIGDVVFDITAGSIIWKINNLKGGHGNKNYGLKCMFEIWDRQIHE 406
D + P FK+ +G + +IW I + GG K Y ++ F +
Sbjct: 319 -----DADS-PRFKTSVGSAKYVPERNVVIWSIKSFPGG---KEYLMRAHFGL------- 362
Query: 407 ALEVQLRNSMDPPPLRTGPKLERIWDQYHGKTTEYDGNENQKEDVDKFALIAMSFEIPYY 466
P +E KE+V+ I + FEIPY+
Sbjct: 363 ------------------PSVE-------------------KEEVEGRPPIGVKFEIPYF 385
Query: 467 AVSGLKVEYFKIEEPQLNYQSFPWVRYKT 495
VSG++V Y KI E + YQ+ PWVRY T
Sbjct: 386 TVSGIQVRYMKIIE-KSGYQALPWVRYIT 413
>At1g60780 [U] KOG0937 Adaptor complexes medium subunit family
Length = 428
Score = 166 bits (421), Expect = 6e-41
Identities = 129/461 (27%), Positives = 219/461 (46%), Gaps = 102/461 (22%)
Query: 46 PIFEGNGWHYAVITRDNLYFAMIMQVN-NSVSPISVLHYLDEIYQLCRKFMGMKLNKLNV 104
P+ NG Y + N+Y + + N N+ S + LH + +++ K +L + ++
Sbjct: 51 PVAYDNGVTYMFVQHSNVYLMIASRQNCNAASLLFFLHRVVDVF----KHYFEELEEESL 106
Query: 105 RDNFHLIFEVIEESSDYGIIQVTNYNIIHDFIKVEVIKPDDDSENTASEKHELPPGDQDE 164
RDNF +++E+++E D+G Q T I+ +FIK + + E + PP
Sbjct: 107 RDNFVVVYELLDEMMDFGYPQYTEARILSEFIKTDAYR---------MEVTQRPP----- 152
Query: 165 TFINSYILRTMTSAVSWRPKGIHYGKNEFFLDVIEKLEFIMDFEEGVVRNNVINGTIICR 224
+T+AVSWR +GI Y KNE FLDVIE + +++ +VR++V+ G + R
Sbjct: 153 --------MAVTNAVSWRSEGIQYKKNEVFLDVIENVNILVNSNGQIVRSDVV-GALKMR 203
Query: 225 SYLSGMPQLSIGLN---------KLMQKNVHFMKRLKFHECVDLHTLIKEESPVIKFIPP 275
+YL+GMP+ +GLN + + ++ +KFH+CV L E I FIPP
Sbjct: 204 TYLTGMPECKLGLNDRVLLEAQGRATKGKAIDLEDIKFHQCVRLARF--ENDRTISFIPP 261
Query: 276 DGEFELCNYKLNRPLLDEPVIKLQSFGLSQKPRKNQETQDKLLLKAAITTHFKAQDSAKE 335
DG F+L Y+L+ + +P+I +++ + + ++ ++L+KA + FK + +A
Sbjct: 262 DGAFDLMTYRLSTQV--KPLIWVEA-----QIESHSRSRVEMLIKA--RSQFKERSTATN 312
Query: 336 LLIKIPIKSVIRKWNIDLEKPPLFKSDIGDVVFDITAGSIIWKINNLKGGHGNKNYGLKC 395
+ I++P+ + D P + ++ +G + +++WKI K GNK Y L+
Sbjct: 313 VEIELPVPT-------DASNPTV-RTSLGSASYAPEKDALVWKI---KSFPGNKEYMLRA 361
Query: 396 MFEIWDRQIHEALEVQLRNSMDPPPLRTGPKLERIWDQYHGKTTEYDGNENQKEDVDKFA 455
F + EA P R P
Sbjct: 362 EFHLPSITAEEA-----------TPERKAP------------------------------ 380
Query: 456 LIAMSFEIPYYAVSGLKVEYFKIEEPQLNYQSFPWVRYKTV 496
I + FEIPY+ VSG++V Y KI E + YQ+ PWVRY T+
Sbjct: 381 -IRVKFEIPYFTVSGIQVRYLKIIE-KSGYQALPWVRYITM 419
>YPL259c [U] KOG0937 Adaptor complexes medium subunit family
Length = 475
Score = 166 bits (419), Expect = 1e-40
Identities = 141/549 (25%), Positives = 245/549 (43%), Gaps = 117/549 (21%)
Query: 1 MSSCFLLLDETYEPLIRRALR---PIHFLDDAILQLQNNLKHHKGCTKPIFEGNGWHYAV 57
M+S D +PL+ R R P+ +D + L ++L+ P NG Y
Sbjct: 1 MASAVYFCDHNGKPLLSRRYRDDIPLSAIDKFPILL-SDLEEQSNLIPPCLNHNGLEYLF 59
Query: 58 ITRDNLYFAMIMQVNNSVSPISVLHYLDEIYQLCRKFMGMKLNKLNVRDNFHLIFEVIEE 117
I ++LY I+ + S + ++ +L ++ ++ ++ + + ++RDNF +I+E+++E
Sbjct: 60 IQHNDLYVVAIV-TSLSANAAAIFTFLHKLVEVLSDYL-KTVEEESIRDNFVIIYELLDE 117
Query: 118 SSDYGIIQVTNYNIIHDFIKVEVIKPDDDSENTASEKHELPPGDQDETFINSYILRTMTS 177
DYGI Q+T ++ +I + K ++ + PP +T+
Sbjct: 118 VMDYGIPQITETKMLKQYITQKSFKLVKSAKKKRNATR--PPV-------------ALTN 162
Query: 178 AVSWRPKGIHYGKNEFFLDVIEKLEFIMDFEEGVVRNNVINGTIICRSYLSGMPQLSIGL 237
+VSWRP+GI + KNE FLD++E + +M + V+R+ +I G + S LSGMP L +G+
Sbjct: 163 SVSWRPEGITHKKNEAFLDIVESINMLMTQKGQVLRSEII-GDVKVNSKLSGMPDLKLGI 221
Query: 238 N------KLMQKNVHF----------------------------------MKRLKFHECV 257
N K + + + ++ LKFH+CV
Sbjct: 222 NDKGIFSKYLDDDTNIPSASATTSDNNTETDKKPSITSSSATNKKKVNIELEDLKFHQCV 281
Query: 258 DLHTLIKEESPVIKFIPPDGEFELCNYKLNRPLLDEPVIKLQSFGLSQKPRKNQETQDKL 317
L E +I FIPPDG+F+L NY+L+ + +P+I ++ + N +
Sbjct: 282 RLSKF--ENEKIITFIPPDGKFDLMNYRLSTTI--KPLIWCD---VNVQVHSNSRIEIHC 334
Query: 318 LLKAAITTHFKAQDSAKELLIKIPIKSVIRKWNIDLEKPPLFKSDIGDVVFDITAGSIIW 377
KA I K+ + E+LI +P D P FK G + + +I+W
Sbjct: 335 KAKAQIKR--KSTATNVEILIPVP----------DDADTPTFKYSHGSLKYVPEKSAILW 382
Query: 378 KINNLKGGHGNKNYGLKCMFEIWDRQIHEALEVQLRNSMDPPPLRTGPKLERIWDQYHGK 437
KI + GG K Y + + + N+ D RT PK
Sbjct: 383 KIRSFPGG---KEYSMSAELGL----------PSISNNEDGN--RTMPK----------- 416
Query: 438 TTEYDGNENQKEDVDKFALIAMSFEIPYYAVSGLKVEYFKIEEPQLNYQSFPWVRYKTVN 497
++ K + + F+IPY+ SG++V Y KI EP+L Y+S+PWVRY T +
Sbjct: 417 ---------SNAEILK-GPVQIKFQIPYFTTSGIQVRYLKINEPKLQYKSYPWVRYITQS 466
Query: 498 DNEYIYQVS 506
++Y +++
Sbjct: 467 GDDYTIRLT 475
>CE11129 [U] KOG0937 Adaptor complexes medium subunit family
Length = 470
Score = 164 bits (414), Expect = 4e-40
Identities = 140/492 (28%), Positives = 224/492 (45%), Gaps = 101/492 (20%)
Query: 38 KHHKGCTKPIFEGNGWHYAVITRDNLYFAMIMQVN-NSVSPISVLHYLDEIYQLCRKFMG 96
K +G P+ G Y I N+Y I + N N + +S L+ + E++ C F
Sbjct: 40 KEDEGSASPVLVHQGISYTYIKYMNVYLVTISKKNTNVILVLSALYKIVEVF--CEYFK- 96
Query: 97 MKLNKLNVRDNFHLIFEVIEESSDYGIIQVTNYNIIHDFI-----KVEVIKPDDDSENTA 151
L + VRDNF +I+E+ +E D+G Q T I+ +FI ++E ++P
Sbjct: 97 -TLEEEAVRDNFVIIYELFDEMLDFGYPQTTESKILQEFITQQGNRLETVRPP------- 148
Query: 152 SEKHELPPGDQDETFINSYILRTMTSAVSWRPKGIHYGKNEFFLDVIEKLEFIMDFEEGV 211
+T+AVSWR +GI Y KNE FLDVIE + + + + V
Sbjct: 149 ---------------------MAVTNAVSWRSEGIKYRKNEVFLDVIESVNMLANAQGTV 187
Query: 212 VRNNVINGTIICRSYLSGMPQLSIGLNK--LMQKNVHFMKR-----------LKFHECVD 258
+R+ ++ G+I R LSGMP+L +GLN Q++ +R +KFH+CV
Sbjct: 188 LRSEIV-GSIRFRVVLSGMPELRLGLNDKVFFQQSGASSRRGNSGKGVELEDIKFHQCVR 246
Query: 259 LHTLIKEESPVIKFIPPDGEFELCNYKLNRPLLDEPVIKLQSFGLSQKPRKNQETQDKLL 318
L E + I FIPPDGEFEL +Y+L + +P+I +++ ++ ++ + +
Sbjct: 247 LSRFDSERT--ISFIPPDGEFELMSYRLTTQV--KPLIWVEA-----AVERHAHSRVEYM 297
Query: 319 LKAAITTHFKAQDSAKELLIKIPIKSVIRKWNIDLEKPPLFKSDIGDVVFDITAGSIIWK 378
+KA + FK Q A + + IP+ S + P FK+ G + +I+W
Sbjct: 298 VKA--KSQFKRQSVANHVEVIIPVPSDV--------SAPKFKTGAGTAKYVPELNAIVWS 347
Query: 379 INNLKGGHGNKNYGLKCMFEIWDRQIHEALEVQLRNSMDPPPLRTGPKLERIWDQ--YHG 436
I + G H Q+ + QL ++ +T ++I + +
Sbjct: 348 IRSFPGEH----------------QVRNIFKYQLNRNVMHICWKTVQYRKKILSEIFFFY 391
Query: 437 KTTEYDGNEN-----------QKEDVDKFALIAMSFEIPYYAVSGLKVEYFKIEEPQLNY 485
+ G E E+++ I + FEIPYY SGL+V Y KI E + Y
Sbjct: 392 IIFTFGGREYIMRSSFMLPSIGSEELEGRPPINVKFEIPYYTTSGLQVRYLKIIE-KSGY 450
Query: 486 QSFPWVRYKTVN 497
Q+ PWVRY T N
Sbjct: 451 QALPWVRYVTQN 462
>At1g10730 [U] KOG0937 Adaptor complexes medium subunit family
Length = 428
Score = 158 bits (400), Expect = 2e-38
Identities = 125/461 (27%), Positives = 218/461 (47%), Gaps = 102/461 (22%)
Query: 46 PIFEGNGWHYAVITRDNLYFAMIMQVN-NSVSPISVLHYLDEIYQLCRKFMGMKLNKLNV 104
P+ NG Y + N+Y + + N N+ S + LH + +++ K +L + ++
Sbjct: 51 PVAYDNGVTYMFVQHSNIYLMIASRQNCNAASLLFFLHRVVDVF----KHYFEELEEESL 106
Query: 105 RDNFHLIFEVIEESSDYGIIQVTNYNIIHDFIKVEVIKPDDDSENTASEKHELPPGDQDE 164
RDNF +++E+++E D+G Q T I+ +FIK + + E + PP
Sbjct: 107 RDNFVVVYELLDEMMDFGYPQFTEARILSEFIKTDAYR---------MEVTQRPP----- 152
Query: 165 TFINSYILRTMTSAVSWRPKGIHYGKNEFFLDVIEKLEFIMDFEEGVVRNNVINGTIICR 224
+T++VSWR +G+ + KNE FLDVIE + +++ +VR++V+ G + R
Sbjct: 153 --------MAVTNSVSWRSEGLKFKKNEVFLDVIESVNILVNSNGQIVRSDVV-GALKMR 203
Query: 225 SYLSGMPQLSIGLN---------KLMQKNVHFMKRLKFHECVDLHTLIKEESPVIKFIPP 275
+YLSGMP+ +GLN + ++ ++ +KFH+CV L E I FIPP
Sbjct: 204 TYLSGMPECKLGLNDRILLEAQGRAIKGKAIDLEDIKFHQCVRLARF--ENDRTISFIPP 261
Query: 276 DGEFELCNYKLNRPLLDEPVIKLQSFGLSQKPRKNQETQDKLLLKAAITTHFKAQDSAKE 335
DG F+L Y+L+ + +P+I +++ ++ ++ ++L+KA + FK + A
Sbjct: 262 DGSFDLMTYRLSTQV--KPLIWVEA-----HIERHSRSRVEMLVKA--RSQFKDRSYATS 312
Query: 336 LLIKIPIKSVIRKWNIDLEKPPLFKSDIGDVVFDITAGSIIWKINNLKGGHGNKNYGLKC 395
+ I++P+ + D P + ++ +G + +++WKI +GNK + LK
Sbjct: 313 VEIELPVPT-------DAYNPDV-RTSLGSAAYAPEKDALVWKIQYF---YGNKEHTLKA 361
Query: 396 MFEIWDRQIHEALEVQLRNSMDPPPLRTGPKLERIWDQYHGKTTEYDGNENQKEDVDKFA 455
F + EA P R P
Sbjct: 362 DFHLPSIAAEEA-----------TPERKAP------------------------------ 380
Query: 456 LIAMSFEIPYYAVSGLKVEYFKIEEPQLNYQSFPWVRYKTV 496
I + FEIP + VSG++V Y KI E + YQ+ PWVRY T+
Sbjct: 381 -IRVKFEIPKFIVSGIQVRYLKIIE-KSGYQAHPWVRYITM 419
>CE28050 [U] KOG0937 Adaptor complexes medium subunit family
Length = 422
Score = 155 bits (392), Expect = 1e-37
Identities = 130/469 (27%), Positives = 211/469 (44%), Gaps = 103/469 (21%)
Query: 38 KHHKGCTKPIFEGNGWHYAVITRDNLYFAMIMQVNNSVSPISVLHYLDEIYQLCRKFMGM 97
K +G P+ ++ I N+Y ++ ++V+ +L +L + ++ ++
Sbjct: 40 KEEEGSAAPVLTYQDTNFVFIKHTNIY--LVSACRSNVNVTMILSFLYKCVEVFSEYF-K 96
Query: 98 KLNKLNVRDNFHLIFEVIEESSDYGIIQVTNYNIIHDFIKVEVIKPDDDSENTASEKHEL 157
+ + +VRDNF +I+E+++E D+G Q T I+ ++I E + S
Sbjct: 97 DVEEESVRDNFVVIYELLDEMMDFGFPQTTESRILQEYITQE-------GQKLISAPR-- 147
Query: 158 PPGDQDETFINSYILRTMTSAVSWRPKGIHYGKNEFFLDVIEKLEFIMDFEEGVVRNNVI 217
PP +T+AVSWR +GI Y KNE FLDVIE + + G V + I
Sbjct: 148 PP-------------MAVTNAVSWRSEGIKYRKNEVFLDVIESVNMLAS-ANGTVLQSEI 193
Query: 218 NGTIICRSYLSGMPQLSIGLNKLM---------QKNVHFMKRLKFHECVDLHTLIKEESP 268
G++ R YL+GMP+L +GLN + K+V ++ +KFH+CV L +
Sbjct: 194 VGSVKMRVYLTGMPELRLGLNDKVLFEGSGRGKSKSVE-LEDVKFHQCVRLSRF--DTDR 250
Query: 269 VIKFIPPDGEFELCNYKLNRPLLDEPVIKLQSFGLSQKPRKNQETQDKLLLKAAITTHFK 328
I FIPPDG FEL +Y+L + +P+I +++ ++ ++ ++KA + FK
Sbjct: 251 TISFIPPDGAFELMSYRLTTVV--KPLIWIET-----SIERHSHSRVSFIIKA--KSQFK 301
Query: 329 AQDSAKELLIKIPIKSVIRKWNIDLEKPPLFKSDIGDVVFDITAGSIIWKINNLKGGHGN 388
+ +A + I IP+ S D + P FK+ IG V + + +W I N GG
Sbjct: 302 RRSTANNVEIIIPVPS-------DADSPK-FKTSIGSVKYTPEQSAFVWTIKNFPGG--- 350
Query: 389 KNYGLKCMFEIWDRQIHEALEVQLRNSMDPPPLRTGPKLERIWDQYHGKTTEYDGNENQK 448
K Y L + V S PP++
Sbjct: 351 KEYLLTAHLSL--------PSVMSEESEGRPPIK-------------------------- 376
Query: 449 EDVDKFALIAMSFEIPYYAVSGLKVEYFKIEEPQLNYQSFPWVRYKTVN 497
+ FEIPY+ SG++V Y KI E + YQ+ PWVRY T N
Sbjct: 377 ----------VKFEIPYFTTSGIQVRYLKIIE-KSGYQALPWVRYITQN 414
>CE28642 [U] KOG0938 Adaptor complexes medium subunit family
Length = 482
Score = 138 bits (348), Expect = 2e-32
Identities = 123/464 (26%), Positives = 202/464 (43%), Gaps = 114/464 (24%)
Query: 50 GNGWHYAVITRDNLYFAMIMQVNNSVSPISVLHYLDEIYQLCRKFMGMKLNKLNVRDNFH 109
GN W AV TR N+ AM+ + +L + + G KLN+ NV++NF
Sbjct: 61 GNVWICAV-TRQNVNAAMVFE------------FLKRFADTMQSYFG-KLNEENVKNNFV 106
Query: 110 LIFEVIEESSDYGIIQVTNYNIIHDFIKVEVIKPDDDSENTASEKHELPPGDQDETFINS 169
LI+E+++E D+G Q T+ ++ FI + ++ D E+ S
Sbjct: 107 LIYELLDEILDFGYPQNTDPGVLKTFITQQGVRTADAPVPVTKEEQ-------------S 153
Query: 170 YILRTMTSAVSWRPKGIHYGKNEFFLDVIEKLEFIMDFEEGVVRNNVINGTIICRSYLSG 229
I +T + WR +GI Y +NE FLDVIE + +M+ ++G V + + G + +SYLSG
Sbjct: 154 QITSQVTGQIGWRREGIKYRRNELFLDVIEYVNLLMN-QQGQVLSAHVAGKVAMKSYLSG 212
Query: 230 MPQLSIGLNKLM----------------QKNVHFMKRLKFHECVDLHTLIKEESPVIKFI 273
MP+ G+N + + + +FH+CV L E I FI
Sbjct: 213 MPECKFGINDKITIEGKSKPGSDDPNKASRAAVAIDDCQFHQCVKLTKF--ETEHAISFI 270
Query: 274 PPDGEFELCNYKLNRPL-LDEPVIKLQSFGLSQKPRKNQETQDKLLLKAAITTHFKAQDS 332
PPDGE+EL Y+ + + L VI P + +++K+ +K + ++FK
Sbjct: 271 PPDGEYELMRYRTTKDIQLPFRVI----------PLVREVSRNKMEVKVVVKSNFKPSLL 320
Query: 333 AKELLIKIPIKSVIRKWNIDLEKPPLFKSDIGDVVFDITAGSIIWKINNLKGGHGNKNYG 392
A++L ++IP + K G + +I+WKI + G
Sbjct: 321 AQKLEVRIPTPPNTSGVQLICMK--------GKAKYKAGENAIVWKIKRMAG-------- 364
Query: 393 LKCMFEIWDRQIHEALEVQLRNSMDPPPLRTGPKLERIWDQYHGKTTEYDGNENQKEDVD 452
+ + QI +++ L TG ++ W++
Sbjct: 365 ------MKESQISAEIDL----------LSTGNVEKKKWNR------------------- 389
Query: 453 KFALIAMSFEIPYYAVSGLKVEYFKIEEPQLNYQS---FPWVRY 493
++M+FE+P +A SGLKV Y K+ EP+LNY WVRY
Sbjct: 390 --PPVSMNFEVP-FAPSGLKVRYLKVFEPKLNYSDHDVIKWVRY 430
>Hs14917109 [U] KOG0938 Adaptor complexes medium subunit family
Length = 435
Score = 135 bits (339), Expect = 2e-31
Identities = 118/461 (25%), Positives = 197/461 (42%), Gaps = 119/461 (25%)
Query: 58 ITRDNLYFAMIMQVNNSVSPISVLHYLDEIYQLCRKFMGMKLNKLNVRDNFHLIFEVIEE 117
+ R N++ A + + N V+ V +L ++ + + G K+++ N+++NF LI+E+++E
Sbjct: 58 VKRSNIWLAAVTKQN--VNAAMVFEFLYKMCDVMAAYFG-KISEENIKNNFVLIYELLDE 114
Query: 118 SSDYGIIQVTNYNIIHDFIKVEVIKPDDDSENTASEKHELPPGDQDETFINSYILRTMTS 177
D+G Q + + FI + IK ++ S+ I +T
Sbjct: 115 ILDFGYPQNSETGALKTFITQQGIKSQHQTKEEQSQ-----------------ITSQVTG 157
Query: 178 AVSWRPKGIHYGKNEFFLDVIEKLEFIMDFEEGVVRNNVINGTIICRSYLSGMPQLSIGL 237
+ WR +GI Y +NE FLDV+E + +M +G V + ++G ++ +SYLSGMP+ G+
Sbjct: 158 QIGWRREGIKYRRNELFLDVLESVNLLMS-PQGQVLSAHVSGRVVMKSYLSGMPECKFGM 216
Query: 238 NKLM----------------QKNVHFMKRLKFHECVDLHTLIKEESPVIKFIPPDGEFEL 281
N + K + FH+CV L E S I FIPPDGEFEL
Sbjct: 217 NDKIVIEKQGKGTADETSKSGKQSIAIDDCTFHQCVRLSKFDSERS--ISFIPPDGEFEL 274
Query: 282 CNYKLNRPLLDEPVIKLQSFGLSQKPRKNQETQDKLLLKAAITTHFKAQDSAKELLIKIP 341
Y+ + ++ P + + KL +K I ++FK A+++ ++IP
Sbjct: 275 MRYRTTKDII---------LPFRVIPLVREVGRTKLEVKVVIKSNFKPSLLAQKIEVRIP 325
Query: 342 IKSVIRKWNIDLEKPPLFKSDI------GDVVFDITAGSIIWKINNLKGGHGNKNYGLKC 395
PL S + G + + +I+WKI + G
Sbjct: 326 --------------TPLNTSGVQVICMKGKAKYKASENAIVWKIKRMAG----------- 360
Query: 396 MFEIWDRQIHEALEVQLRNSMDPPPLRTGPKLERIWDQYHGKTTEYDGNENQKEDVDKFA 455
+ + QI + E++L + D P
Sbjct: 361 ---MKESQI--SAEIELLPTNDKKKWARPP------------------------------ 385
Query: 456 LIAMSFEIPYYAVSGLKVEYFKIEEPQLNYQS---FPWVRY 493
I+M+FE+P +A SGLKV Y K+ EP+LNY WVRY
Sbjct: 386 -ISMNFEVP-FAPSGLKVRYLKVFEPKLNYSDHDVIKWVRY 424
>7300861 [U] KOG0938 Adaptor complexes medium subunit family
Length = 438
Score = 132 bits (331), Expect = 2e-30
Identities = 122/466 (26%), Positives = 201/466 (42%), Gaps = 126/466 (27%)
Query: 58 ITRDNLYFAMIMQVNNSVSPISVLHYLDEIYQLCRKFMGMKLNKLNVRDNFHLIFEVIEE 117
I R N++ A + + N V+ V +L +I ++ + + G K+++ N+++NF LI+E+++E
Sbjct: 58 IKRANIWLAAVTKQN--VNAAMVFEFLLKIIEVMQSYFG-KISEENIKNNFVLIYELLDE 114
Query: 118 SSDYGIIQVTNYNIIHDFIKVEVIKPDDDSENTASEKHELPPGDQDETFINSYILRTMTS 177
D+G Q T+ + FI + IK +A+++ ++ I +T
Sbjct: 115 ILDFGYPQNTDSGTLKTFITQQGIK-------SATKEEQMQ------------ITSQVTG 155
Query: 178 AVSWRPKGIHYGKNEFFLDVIEKLEFIMDFEEGVVRNNVINGTIICRSYLS-GMPQLSIG 236
+ WR +GI Y +NE FLDV+E + +M +G V + + G ++ +SYLS GMP+ G
Sbjct: 156 QIGWRREGIKYRRNELFLDVLEYVNLLMS-PQGQVLSAHVAGKVVMKSYLSVGMPECKFG 214
Query: 237 LN-KLMQ-------------------KNVHFMKRLKFHECVDLHTLIKEESPVIKFIPPD 276
+N K++ K V + +FH+CV L E S I FIPPD
Sbjct: 215 INDKIVMESKGRGLSGNSEAETSRSGKPVVVIDDCQFHQCVKLSKFETEHS--ISFIPPD 272
Query: 277 GEFELCNYKLNRPLLDEPVIKLQSFGLSQKPRKNQETQDKLLLKAAITTHFKAQDSAKEL 336
GEFEL Y+ + + S P + + K+ +K + ++FK +++
Sbjct: 273 GEFELMRYRTTKDI---------SLPFRVIPLVREVGRTKMEVKVVLKSNFKPSLLGQKI 323
Query: 337 LIKIPIKSVIRKWNIDLEKPPLFKSDI------GDVVFDITAGSIIWKINNLKGGHGNKN 390
+KIP PL S + G + + +I+WKI + G K
Sbjct: 324 EVKIP--------------TPLNTSGVQLICLKGKAKYKASENAIVWKIKRMA---GMKE 366
Query: 391 YGLKCMFEIWDRQIHEALEVQLRNSMDPPPLRTGPKLERIWDQYHGKTTEYDGNENQKED 450
L E+ LE + PP
Sbjct: 367 TQLSAEIEL--------LETDTKKKWTRPP------------------------------ 388
Query: 451 VDKFALIAMSFEIPYYAVSGLKVEYFKIEEPQLNYQS---FPWVRY 493
I+M+FE+P +A SG KV Y K+ EP+LNY WVRY
Sbjct: 389 ------ISMNFEVP-FAPSGFKVRYLKVFEPKLNYSDHDVVKWVRY 427
>At5g46630 [U] KOG0938 Adaptor complexes medium subunit family
Length = 438
Score = 128 bits (322), Expect = 2e-29
Identities = 110/468 (23%), Positives = 203/468 (42%), Gaps = 105/468 (22%)
Query: 46 PIFEGNGWHYAVITRDNLYFAMIMQVNNSVSPISVLHYLDEIYQLCRKFMGMKLNKLNVR 105
P+ + G + + N+Y +++ N +V+ ++ E L + + G ++ +R
Sbjct: 49 PVRQIGGCSFVYMRISNVYIVIVVSSNANVA--CGFKFVVEAVALFKSYFGGAFDEDAIR 106
Query: 106 DNFHLIFEVIEESSDYGIIQVTNYNIIHDFIKVEVIKPDDDSENTASEKHELPPGDQDET 165
+NF LI+E+++E D+G Q + I+ +I E ++ S+ +D+
Sbjct: 107 NNFVLIYELLDEIMDFGYPQNLSPEILKLYITQEGVRSPFSSK------------PKDKP 154
Query: 166 FINSYILRTMTSAVSWRPKGIHYGKNEFFLDVIEKLEFIMDFEEGVVRNNVINGTIICRS 225
N+ + +T AV WR +G+ Y KNE FLD++E + +M + V+R +V G ++ +
Sbjct: 155 VPNATL--QVTGAVGWRREGLAYKKNEVFLDIVESVNLLMSSKGNVLRCDV-TGKVLMKC 211
Query: 226 YLSGMPQLSIGLNKL--MQKNVHFMKR------------LKFHECVDLHTLIKEESPVIK 271
+LSGMP L +GLN ++K R + FH+CV+L E++ +
Sbjct: 212 FLSGMPDLKLGLNDKIGLEKESEMKSRPAKSGKTIELDDVTFHQCVNLTRFNSEKT--VS 269
Query: 272 FIPPDGEFELCNYKL----NRPLLDEPVIKLQSFGLSQKPRKNQETQDKLLLKAAITTHF 327
F+PPDGEFEL Y++ N P P IK + + ++ + + + F
Sbjct: 270 FVPPDGEFELMKYRITEGVNLPFRVLPTIK-------------ELGRTRMEVNVKVKSVF 316
Query: 328 KAQDSAKELLIKIPIKSVIRKWNIDLEKPPLFKSDIGDVVFDITAGSIIWKINNLKGGHG 387
A+ A +++KIP+ K N F+ G ++ + ++WKI G
Sbjct: 317 GAKMFALGVVVKIPVPKQTAKTN--------FQVTTGRAKYNPSIDCLVWKIRKFPG--- 365
Query: 388 NKNYGLKCMFEIWDRQIHEALEVQLRNSMDPPPLRTGPKLERIWDQYHGKTTEYDGNENQ 447
+ + E++L ++M T P ++
Sbjct: 366 -------------QTESTLSAEIELISTMGEKKSWTRPPIQ------------------- 393
Query: 448 KEDVDKFALIAMSFEIPYYAVSGLKVEYFKIEEPQLNYQSFPWVRYKT 495
M F++P + SGL+V + K+ E + Y + WVRY T
Sbjct: 394 -----------MEFQVPMFTASGLRVRFLKVWE-KSGYNTVEWVRYIT 429
>SPAC31A2.09c [U] KOG0938 Adaptor complexes medium subunit family
Length = 446
Score = 122 bits (305), Expect = 2e-27
Identities = 118/478 (24%), Positives = 202/478 (41%), Gaps = 113/478 (23%)
Query: 46 PIFEGNGWHYAVITRDNLYFAMIMQVNNSVSPISVLHYLDEIYQLCRKFMGMKLNKLNVR 105
PI Y ++LY I + N +V + VL +L+ + Q + G KLN+ V+
Sbjct: 45 PIVSIGSSTYIYTKHEDLYVVAITKGNPNV--MIVLEFLESLIQDLTHYFG-KLNENTVK 101
Query: 106 DNFHLIFEVIEESSDYGIIQVTNYNIIHDFIKVEVIKPDDDSEN-TASEKHELPPGDQDE 164
DN IFE+++E DYGIIQ T + + + + +K ++ + S +L E
Sbjct: 102 DNVSFIFELLDEMIDYGIIQTTEPDALARSVSITAVKKKGNALSLKRSHSSQLAHTTSSE 161
Query: 165 TFINSYILRTMTSAVSWRPKGIHYGKNEFFLDVIEKLEFIMDFEEGVVRNNVINGTIICR 224
+ +V WR GI Y KN ++D++E++ ++ V+R++V +G + R
Sbjct: 162 ----------IPGSVPWRRAGIKYRKNSIYIDIVERMNLLISSTGNVLRSDV-SGVVKMR 210
Query: 225 SYLSGMPQLSIGLN-----KLMQKNVH-----------------FMKRLKFHECVDLHTL 262
+ LSGMP+ GLN KL Q ++ +FH+CV L
Sbjct: 211 AMLSGMPECQFGLNDKLDFKLKQSESKSKSNNSRNPSSVNGGFVILEDCQFHQCVRLPEF 270
Query: 263 IKEESPVIKFIPPDGEFELCNYK----LNRPLLDEPVIKLQSFGLSQKPRKNQETQDKLL 318
E I FIPPDGE EL +Y+ +N P P+++ Q ++ K++
Sbjct: 271 ENEHR--ITFIPPDGEVELMSYRSHENINIPFRIVPIVE-------------QLSKQKII 315
Query: 319 LKAAITTHFKAQDSAKELLIKIPIKSVIRKWNIDLEKPPLFKSDIGDVVFDITAGSIIWK 378
+ +I + + S+ L +IP+ + + K N + + G ++ + I WK
Sbjct: 316 YRISIRADYPHKLSS-SLNFRIPVPTNVVKANPRVNR--------GKAGYEPSENIINWK 366
Query: 379 INNLKGGHGNKNYGLKCMFEIWDRQIHEALEVQLRNSMDPPPLRTGPKLERIWDQYHGKT 438
I G + ++ EV+L N+ + ++IW +
Sbjct: 367 IPRFLG----------------ETELIFYAEVELSNTTN----------QQIWAK----- 395
Query: 439 TEYDGNENQKEDVDKFALIAMSFEIPYYAVSGLKVEYFKIEEP-QLNYQSFPWVRYKT 495
I++ F I + SGL V+Y ++ EP Y+S WVRY T
Sbjct: 396 ----------------PPISLDFNILMFTSSGLHVQYLRVSEPSNSKYKSIKWVRYST 437
>At4g24550 [U] KOG0937 Adaptor complexes medium subunit family
Length = 451
Score = 112 bits (279), Expect = 2e-24
Identities = 117/479 (24%), Positives = 200/479 (41%), Gaps = 96/479 (20%)
Query: 46 PIFEGNGWHYAVITRDNLYFAMIMQVNNSVSPISVLHYLDEIYQLCRKFMGMKLNKLNVR 105
PIF +G +Y + LYF +VN VSP VL L I ++ + ++G+ LN+ + R
Sbjct: 50 PIFNVDGVNYFHVKVVGLYFVATTRVN--VSPSLVLELLQRIARVIKDYLGV-LNEDSFR 106
Query: 106 DNFHLIFEVIEESSDYGIIQVTNYNIIHDFIKVEVIKPDDDSENTASEKHELPPGDQDET 165
NF L++E+++E D+G +Q T+ ++ +I E I L P D
Sbjct: 107 KNFVLVYELLDEVIDFGYVQTTSTEVLKSYIFNEPI---------VVSPARLQPIDPAAI 157
Query: 166 FINSYILRTMT----SAVSWRPKGIHYGKNEFFLDVIEKLEFIMDFEEGVVRNNVINGTI 221
F T S V+ P G + E F+D+IEK+ G + + I+GTI
Sbjct: 158 FTQGAKRMPGTAVTKSVVANDPGGRR--REEIFVDIIEKISVTFS-SSGYILTSEIDGTI 214
Query: 222 ICRSYLSGMPQLSIGLNKLMQ-----KNVH----------FMKRLKFHECVDLHTLIKEE 266
+SYLSG P++ + LN+ + ++V+ + FHE V L + +
Sbjct: 215 QMKSYLSGNPEIRLALNEDLNIGRGGRSVYDYRSSSGSGVILDDCNFHESVRLDSF--DS 272
Query: 267 SPVIKFIPPDGEFELCNYKLNRPLLDEPVIKLQSFGLSQKPRKNQETQDKLLLKAAITTH 326
+ +PPDGEF + NY++ + +P + + + + R E K I
Sbjct: 273 DRTLSLVPPDGEFPVMNYRMTQEF--KPPFHVNTL-IEEAGRLKAEVIIK------IRAE 323
Query: 327 FKAQDSAKELLIKIPIKSVIRKWNIDLEKPPLFKSDIGDVVFDITAGSIIWKINNLKGGH 386
F + A + +++P+ + + + +LE P D F + + W + + GG
Sbjct: 324 FPSDIIANTITVQMPLPNYTSRASFELE--PGAAGQRTD--FKESNKMLEWNLKKIVGG- 378
Query: 387 GNKNYGLKCMFEIWDRQIHEALEVQLRNSMDPPPLRTGPKLERIWDQYHGKTTEYDGNEN 446
G K F ++HG T+ G
Sbjct: 379 GEHTLRAKLTFS---------------------------------QEFHGNITKEAGP-- 403
Query: 447 QKEDVDKFALIAMSFEIPYYAVSGLKVEYFKIEEPQLNYQSFPWVRYKTVNDNEYIYQV 505
++M+F IP Y VS L+V+Y +I + +Y + WVRY T N Y+ ++
Sbjct: 404 ----------VSMTFTIPMYNVSKLQVKYLQIAKKSSSYNPYRWVRYVT-QANSYVARI 451
>Hs6912240 [U] KOG2740 Clathrin-associated protein medium chain
Length = 418
Score = 95.9 bits (237), Expect = 1e-19
Identities = 69/237 (29%), Positives = 110/237 (46%), Gaps = 28/237 (11%)
Query: 54 HYAV-ITRDNLYFAMIMQVNNSVSPISVLHYLDEIYQLCRKFMGMKLNKLNVRDNFHLIF 112
HY + I RD L+F ++Q V P+ V+ +L + + + G + ++ ++DN +++
Sbjct: 54 HYLISIYRDKLFFVSVIQTE--VPPLFVIEFLHRVADTFQDYFG-ECSEAAIKDNVVIVY 110
Query: 113 EVIEESSDYGIIQVTNYNIIHDFIKVEVIKPDDDSENTASEK--HELPPGDQDETFINSY 170
E++EE D G T NI+ + IK I + T S LP G
Sbjct: 111 ELLEEMLDNGFPLATESNILKELIKPPTILRSVVNSITGSSNVGDTLPTGQ--------- 161
Query: 171 ILRTMTSAVSWRPKGIHYGKNEFFLDVIEKLEFIMDFEEGVVRNNVINGTIICRSYLSGM 230
S + WR G+ Y NE + DV+E+++ I+D + G I G I LSGM
Sbjct: 162 -----LSNIPWRRAGVKYTNNEAYFDVVEEIDAIID-KSGSTVFAEIQGVIDACIKLSGM 215
Query: 231 PQLSIGLNKLMQKNVHFMKRLKFHECVDLHTLIKEESPVIKFIPPDGEFELCNYKLN 287
P LS+ N + + FH C+ E V+ FIPPDG F L +Y+++
Sbjct: 216 PDLSLSF-----MNPRLLDDVSFHPCIRFKRW--ESERVLSFIPPDGNFRLISYRVS 265
>CE04654 [U] KOG2740 Clathrin-associated protein medium chain
Length = 332
Score = 91.7 bits (226), Expect = 2e-18
Identities = 73/286 (25%), Positives = 134/286 (46%), Gaps = 32/286 (11%)
Query: 2 SSCFLLLDETYEPLIRRALRPIHFLDDAILQLQNNLKHHKGCTKPIFEGNGWHYAV-ITR 60
SS +LL++ ++ +I R++ D +Q H + P HY + + +
Sbjct: 10 SSGDVLLEKHWKSVIHRSIC------DYFFDIQKKSIHPEDV--PPIISTPHHYLINVYQ 61
Query: 61 DNLYFAMIMQVNNSVSPISVLHYLDEIYQLCRKFMGMKLNKLNVRDNFHLIFEVIEESSD 120
+NL+ ++ V P+ V+ +L + Q ++ + + ++++N ++FE+++E D
Sbjct: 62 NNLFLVAVITVETP--PLMVIEFLHRVIQTFTQYFD-EFSDSSMKENCVMVFELLDEMLD 118
Query: 121 YGIIQVTNYNIIHDFIKVEVIKPDDDSENTASEKHELPPGDQDETFINSYILRTMTSAVS 180
G VT NI+ D +IKP + N A++ T ++ + S +
Sbjct: 119 NGFPLVTEMNILQD-----LIKPPNFLRNIANQV-------TGRTNLSETLPTGQLSNIP 166
Query: 181 WRPKGIHYGKNEFFLDVIEKLEFIMDFEEGVVRNNVINGTIICRSYLSGMPQLSIGLNKL 240
WR +G+ Y NE + DVIE+++ I+D + V + +C LSGMP L++ L
Sbjct: 167 WRRQGVKYTNNEAYFDVIEEIDVIVDKQGSTVFAEIQGYVDVC-CKLSGMPDLTMTL--- 222
Query: 241 MQKNVHFMKRLKFHECVDLHTLIKEESPVIKFIPPDGEFELCNYKL 286
N + + FH CV E V+ F+PPDG F L +Y +
Sbjct: 223 --INPRLLDDVSFHPCVRYKRW--ENEKVLSFVPPDGNFRLLSYHI 264
>7290785 [U] KOG2740 Clathrin-associated protein medium chain
Length = 422
Score = 90.9 bits (224), Expect = 4e-18
Identities = 65/234 (27%), Positives = 108/234 (45%), Gaps = 21/234 (8%)
Query: 54 HYAVITRDNLYFAMIMQVNNSVSPISVLHYLDEIYQLCRKFMGMKLNKLNVRDNFHLIFE 113
HY +IT +++ V P+ V+ +L + + + G ++ ++DN+ +++E
Sbjct: 51 HYYLITVQRDTVSLVAACKQEVPPLFVIEFLHRVVDTFQDYFG-DCSESVIKDNYVVVYE 109
Query: 114 VIEESSDYGIIQVTNYNIIHDFIKVEVIKPDDDSENTASEKHELPPGDQDETFINSYILR 173
+++E D G T NI+ + IK I NT + K +++ +
Sbjct: 110 LLDEMLDNGFPLATESNILKELIKPPNILRT--IANTVTGKSN----------VSTTLPS 157
Query: 174 TMTSAVSWRPKGIHYGKNEFFLDVIEKLEFIMDFEEGVVRNNVINGTIICRSYLSGMPQL 233
SAV WR G+ Y NE + DVIE+++ I+D + G I G I C LSGMP L
Sbjct: 158 GQLSAVRWRRSGVRYTNNEAYFDVIEEVDAIID-KSGSTVFAEIQGHIDCCIKLSGMPDL 216
Query: 234 SIGLNKLMQKNVHFMKRLKFHECVDLHTLIKEESPVIKFIPPDGEFELCNYKLN 287
++ N + FH CV E ++ FIPPDG F L +Y ++
Sbjct: 217 TLSF-----MNPRLFDDVSFHPCVRYKRW--EAERLLSFIPPDGNFRLMSYHIS 263
>Hs5803000 [U] KOG2740 Clathrin-associated protein medium chain
Length = 418
Score = 90.5 bits (223), Expect = 5e-18
Identities = 68/235 (28%), Positives = 108/235 (45%), Gaps = 24/235 (10%)
Query: 54 HYAV-ITRDNLYFAMIMQVNNSVSPISVLHYLDEIYQLCRKFMGMKLNKLNVRDNFHLIF 112
HY + + R ++F ++Q V P+ V+ +L + + + G+ + ++DN +++
Sbjct: 54 HYLLSVYRHKIFFVAVIQTE--VPPLFVIEFLHRVVDTFQDYFGVCSEPV-IKDNVVVVY 110
Query: 113 EVIEESSDYGIIQVTNYNIIHDFIKVEVIKPDDDSENTASEKHELPPGDQDETFINSYIL 172
EV+EE D G T NI+ + IK I + T S GDQ T
Sbjct: 111 EVLEEMLDNGFPLATESNILKELIKPPTILRTVVNTITGSTN----VGDQLPT------- 159
Query: 173 RTMTSAVSWRPKGIHYGKNEFFLDVIEKLEFIMDFEEGVVRNNVINGTIICRSYLSGMPQ 232
S V WR G+ Y NE + DVIE+++ I+D + G I G I L+GMP
Sbjct: 160 -GQLSVVPWRRTGVKYTNNEAYFDVIEEIDAIID-KSGSTITAEIQGVIDACVKLTGMPD 217
Query: 233 LSIGLNKLMQKNVHFMKRLKFHECVDLHTLIKEESPVIKFIPPDGEFELCNYKLN 287
L++ N + + FH CV E ++ FIPPDG F L +Y ++
Sbjct: 218 LTLSF-----MNPRLLDDVSFHPCVRFKRW--ESERILSFIPPDGNFRLLSYHVS 265
>At1g56590 [U] KOG2740 Clathrin-associated protein medium chain
Length = 417
Score = 88.6 bits (218), Expect = 2e-17
Identities = 68/254 (26%), Positives = 122/254 (47%), Gaps = 29/254 (11%)
Query: 54 HYAV-ITRDNLYFAMIMQVNNSVSPISVLHYLDEIYQLCRKFMGMKLNKLNVRDNFHLIF 112
HY I RD + F QV + P+ + +L + + +++G LN+ ++DNF +++
Sbjct: 55 HYLFQIVRDGITFLACSQVE--MPPLMAIEFLCRVADVLSEYLG-GLNEDLIKDNFIIVY 111
Query: 113 EVIEESSDYGIIQVTNYNIIHDFIKVEVIKPDDDSENTASEKHELPPGDQDETFINSYIL 172
E+++E D G T +I+ E+I P N S+ + G+ ++ +
Sbjct: 112 ELLDEMIDNGFPLTTEPSILK-----EMIAPP----NLVSKMLSVVTGNASN--VSDTLP 160
Query: 173 RTMTSAVSWRPKGIHYGKNEFFLDVIEKLEFIMDFEEGVVRNNVINGTIICRSYLSGMPQ 232
S V WRP Y NE ++D++E+++ I++ +G + I G + S L+G P
Sbjct: 161 SGAGSCVPWRPTDPKYSSNEVYVDLVEEMDAIVN-RDGELVKCEIYGEVQMNSQLTGFPD 219
Query: 233 LSIGLNKLMQKNVHFMKRLKFHECVDLHTLIKEESPVIKFIPPDGEFELCNYKL------ 286
L++ N ++ ++FH CV E V+ F+PPDGEF+L +Y+
Sbjct: 220 LTLSF-----ANPSILEDMRFHPCVRYRPW--ESHQVLSFVPPDGEFKLMSYRCVVKKLK 272
Query: 287 NRPLLDEPVIKLQS 300
N P+ +P I S
Sbjct: 273 NTPVYVKPQITSDS 286
>Hs14917111 [U] KOG0937 Adaptor complexes medium subunit family
Length = 453
Score = 82.4 bits (202), Expect = 1e-15
Identities = 109/510 (21%), Positives = 203/510 (39%), Gaps = 75/510 (14%)
Query: 1 MSSCFLLLDETYEPLIRRALRPIHFLDDAILQLQNNLKHHKGCTKPI-FEGNGWHYAVIT 59
M S F +L +PLI + R D L G P+ +G H+ I
Sbjct: 1 MISQFFILSSKGDPLIYKDFRGDSGGRDVAELFYRKLTGLPGDESPVVMHHHGRHFIHIR 60
Query: 60 RDNLYFAMIMQVNNSVSPISVLHYLDEIYQLCRKFMGMKLNKLNVRDNFHLIFEVIEESS 119
LY +++ + +VSP S+L L + L + G L + + N L++E+++E
Sbjct: 61 HSGLY--LVVTTSENVSPFSLLELLSRLATLLGDYCG-SLGEGTISRNVALVYELLDEVL 117
Query: 120 DYGIIQVTNYNIIHDFIKVEVIKPDDDSENTASEKHEL-PPGDQDETFINSYILRTMTSA 178
DYG +Q T+ ++ +FI+ E + S S Q + +S R + S+
Sbjct: 118 DYGYVQTTSTEMLRNFIQTEAVVSKPFSLFDLSSVGLFGAETQQSKVAPSSAASRPVLSS 177
Query: 179 VSWRPKGIHYGKNEFFLDVIEKLEFIMDFEEGVVRNNVINGTIICRSYLSGMPQLSIGLN 238
S + + KNE FLDV+E+L ++ +++ +V G I +S+L ++ IGL
Sbjct: 178 RSDQSQ-----KNEVFLDVVERLSVLIASNGSLLKVDV-QGEIRLKSFLPSGSEMRIGLT 231
Query: 239 KLMQKNVHFMK---------RLKFHECVDLHTLIKEESPVIKFIPPDGEFELCNYKLNRP 289
+ ++ + FH V+L E +++ PP GE + Y+L+
Sbjct: 232 EEFCVGKSELRGYGPGIRVDEVSFHSSVNLDEF--ESHRILRLQPPQGELTVMRYQLSDD 289
Query: 290 LLDEPVIKLQSFGLSQKPRKNQETQDKLLLKAAITTHFKAQDSAKELLIKIPIKSVIRKW 349
L +L F Q R + Q L L+ + ++ A + + +P+ +
Sbjct: 290 LPSPLPFRL--FPSVQWDRGSGRLQVYLKLRCDLL----SKSQALNVRLHLPLPRGVVSL 343
Query: 350 NIDLEKPPLFKSDIGDVVFDITAGSIIWKINNLKGGHGNKNYGLKCMFEIWDRQIHEALE 409
+ +L P + ++ G++ W + ++GG Q+ +
Sbjct: 344 SQELSSP--------EQKAELAEGALRWDLPRVQGG----------------SQLSGLFQ 379
Query: 410 VQLRNSMDPPPLRTGPKLERIWDQYHGKTTEYDGNENQKEDVDKFALIAMSFEIPYYAVS 469
+ + PP HG +T ++SFE+P + S
Sbjct: 380 MDVPGPPGPPS--------------HGLST--------SASPLGLGPASLSFELPRHTCS 417
Query: 470 GLKVEYFKIE-EPQLNYQSFPWVRYKTVND 498
GL+V + ++ P N WVR+ + +D
Sbjct: 418 GLQVRFLRLAFRPCGNANPHKWVRHLSHSD 447
>YOL062c [U] KOG0938 Adaptor complexes medium subunit family
Length = 491
Score = 77.4 bits (189), Expect = 5e-14
Identities = 77/350 (22%), Positives = 133/350 (38%), Gaps = 102/350 (29%)
Query: 179 VSWRPKGIHYGKNEFFLDVIEKLEFIMDFEEGVVRNNVINGTIICRSYLSGMPQLSIGLN 238
++WRPKGI + K+E FL V E++ ++ +G + + ++GTI ++LSG P GLN
Sbjct: 198 ITWRPKGIIHKKDEVFLYVNERINILVS-RDGSILKSYVDGTIDITTHLSGTPICRFGLN 256
Query: 239 K------------LMQKNVH-------------------FMKRLKFHECVDLHTLIKEES 267
L Q+ H ++ KFHECV L +
Sbjct: 257 DSLGMQSEDEKKWLAQQQRHSGSDFGNKNFIPKAAAGSVLLEDCKFHECVSLDKFNRNH- 315
Query: 268 PVIKFIPPDGEFELCNY----KLNRPLLDEPVIKLQSFGLSQKPRKNQETQDKLLLKAAI 323
+I+F+PPDG EL Y +N P P++ + ++ E ++ LK+
Sbjct: 316 -IIEFVPPDGSMELMKYHVRDNINLPFKVTPIVTHST--------RDNEIDYRITLKSL- 365
Query: 324 TTHFKAQDSAKELLIKIPIKSVIRKWNIDLEKPPLFKSDIGDVVFDITAGSIIWKINNLK 383
F + SAK++++ IP+ I + G F ++IW+ N
Sbjct: 366 ---FPGKLSAKDVVLHIPVPPSTVDCKISVSN--------GHCKFVPEENAMIWRFNKYN 414
Query: 384 GGHGNKNYGLKCMFEIWDRQIHEALEVQLRNSMDPPPLRTGPKLERIWDQYHGKTTEYDG 443
G N + + ++ L+ PP
Sbjct: 415 GLTENTLSAVTV-------STSDTTQLNLQQWTRPP------------------------ 443
Query: 444 NENQKEDVDKFALIAMSFEIPYYAVSGLKVEYFKIEEPQLNYQSFPWVRY 493
I++ FE+ ++ SGL V YF I +++ W++Y
Sbjct: 444 -------------ISLEFEVMMFSNSGLVVRYFTISGKDSKHRAVKWIKY 480
>SPBC651.11c [U] KOG2740 Clathrin-associated protein medium chain
Length = 425
Score = 61.6 bits (148), Expect = 3e-09
Identities = 51/218 (23%), Positives = 91/218 (41%), Gaps = 42/218 (19%)
Query: 77 PISVLHYLDEIYQLCRKFMGMKLNKLNVRDNFHLIFEVIEESSDYGIIQVTNYNIIHDFI 136
P+ + + I + + F G N V N +I +++ E DYG N + D +
Sbjct: 79 PLYIHDIMRRIVDVVKTFFG-GFNASKVEKNVCVIVQLLAEMIDYGYATCMEPNALQDIV 137
Query: 137 KVEVIKPDDDSENTASEKHELPPGDQDETFINSYI----LRTMT-----SAVSWRPKGIH 187
+ +F+N ++ L+T T V WR
Sbjct: 138 PLP-------------------------SFMNKFMAVTGLQTNTPTLARDTVPWRTAKAK 172
Query: 188 YGKNEFFLDVIEKLEFIMDFEEGVVRNNVINGTIICRSYLSGMPQLSIGLNKLMQKNVHF 247
Y NEFF+ V+E++ + G + + + C+ +SGMP L + L +
Sbjct: 173 YATNEFFIHVLERVSAVYQ-PNGKLAFGTVKSDMECKCQISGMPLLLLSLRPGTK----- 226
Query: 248 MKRLKFHECVDLHTLIKEESPVIKFIPPDGEFELCNYK 285
+ ++FH+ V+L K+ I+FIPPDG+F L +++
Sbjct: 227 LGNVRFHQSVNLKRW-KQHPDQIEFIPPDGKFTLASFQ 263
>YBR288c [U] KOG2740 Clathrin-associated protein medium chain
Length = 483
Score = 57.8 bits (138), Expect = 4e-08
Identities = 61/269 (22%), Positives = 121/269 (44%), Gaps = 30/269 (11%)
Query: 54 HYAVITRDNLYFAMIMQVNNSVSPISVLHYLDEIYQLCRKFMG---MKLNKL-NVRDNFH 109
+++VI + N + + + S P+ +L+ I ++ ++ + + K+ N D
Sbjct: 65 YFSVINKLNYW--CLASTSKSKGPLDCFTFLETIDRILLEYFDKDKLSIKKIVNNYDRIS 122
Query: 110 LIFEVIEESSDYGIIQVTNYNIIHDFIKVEVIKPDDDSENTASEKHELP-----PGDQDE 164
LIF E+ + + + N I K V + D S+ +S H L P + +
Sbjct: 123 LIFNCCVEAGEPNVSDMLYVNKI----KEAVPERSDLSKFISSTAHNLQQAVQLPQQRQQ 178
Query: 165 TFINSYILRTMTSAVS------WRP-KGIHYGKNEFFLDVIEKLEFIMDFEEGVVR--NN 215
+ I R S + WR + + NE ++D++E + + ++ +R
Sbjct: 179 QLQQNQISRGSNSLIENEEIVPWRTSRASKHENNELYVDLLETFHVVFEKKKSHLRLLTG 238
Query: 216 VINGTIICRSYLSGMPQLSIGLNKLMQKNVHFMKRLKFHECVDLHTLIKEESPVIKFIPP 275
I+G + RSYL+ P +++ LN M ++ H+CV+++ + S I FIPP
Sbjct: 239 SIHGIVDVRSYLNDNPLVAVKLNT-MGNDIGIPS---LHDCVEINDGVFSPSN-ITFIPP 293
Query: 276 DGEFELCNYKLN-RPLLDEPVIKLQSFGL 303
DG+F L Y ++ + + +++ S GL
Sbjct: 294 DGKFRLLEYSVDLSSQVKQSGVRMNSIGL 322
>Hs17461156 [U] KOG0937 Adaptor complexes medium subunit family
Length = 124
Score = 56.6 bits (135), Expect = 9e-08
Identities = 33/94 (35%), Positives = 53/94 (56%), Gaps = 8/94 (8%)
Query: 148 ENTASEKHELPPGDQDETFINSYILRTMTSAVSWRPKGIHYGKNEFFLDVIEKLEFIMDF 207
E T + ++L G S + T+ +AVSW + I Y KNE F+DVIE +++
Sbjct: 10 EYTTQQSNKLQRG-------KSKVPLTINNAVSWCSERIKYKKNEVFIDVIESANLLVNA 62
Query: 208 EEGVVRNNVINGTIICRSYLSGMPQLSIGLNKLM 241
+ ++ + + GTI + +LSGMP+L +GLN M
Sbjct: 63 KGSILLSEIF-GTIKLKVFLSGMPELRLGLNDSM 95
Database: KOG eukaryal database 04/03
Posted date: Apr 14, 2003 1:07 PM
Number of letters in database: 30,389,216
Number of sequences in database: 60,738
Lambda K H
0.321 0.140 0.421
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 33,293,949
Number of Sequences: 60738
Number of extensions: 1527289
Number of successful extensions: 3531
Number of sequences better than 1.0e-05: 26
Number of HSP's better than 0.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 23
Number of HSP's that attempted gapping in prelim test: 3418
Number of HSP's gapped (non-prelim): 51
length of query: 507
length of database: 30,389,216
effective HSP length: 111
effective length of query: 396
effective length of database: 23,647,298
effective search space: 9364330008
effective search space used: 9364330008
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)