ORF STATUS Function Best COG Functional category Pathways and functional systems
r_klactVI6794 good K KOG4073 Transcription Pterin carbinolamine dehydratase PCBD/dimerization cofactor of HNF1
Only best alignment is shown:
BLASTP 2.2.3 [May-13-2002]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= r_klactVI6794 2367059  2367583 175  
         (175 letters)

Database: KOG eukaryal database 04/03 
           60,738 sequences; 30,389,216 total letters

Searching..................................................done

Color Key for Alignment Scores:   


                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

YHL018w [K] KOG4073 Pterin carbinolamine dehydratase PCBD/dimeri...    86   3e-17
SPAC27D7.04 [K] KOG4073 Pterin carbinolamine dehydratase PCBD/di...    65   5e-11
CE18240 [K] KOG4073 Pterin carbinolamine dehydratase PCBD/dimeri...    64   1e-10
7301813 [K] KOG4073 Pterin carbinolamine dehydratase PCBD/dimeri...    59   4e-09
Hs4557831 [K] KOG4073 Pterin carbinolamine dehydratase PCBD/dime...    58   8e-09
Hs14149825 [K] KOG4073 Pterin carbinolamine dehydratase PCBD/dim...    55   5e-08

>YHL018w [K] KOG4073 Pterin carbinolamine dehydratase PCBD/dimerization
           cofactor of HNF1
          Length = 120

 Score = 85.5 bits (210), Expect = 3e-17
 Identities = 42/118 (35%), Positives = 64/118 (53%), Gaps = 14/118 (11%)

Query: 61  MYNXXXXXXXXXXXXXXXTQELRKLPKWRLMENE-------LVRDYKFRDFEETWSFLNK 113
           M+N                ++L+ L +W +  +        + R+  F+D+E TW+FL +
Sbjct: 1   MHNKIVRIASSALTGGKLLEKLKPLTRWEVQWDPNKTKCLGITREVTFKDYETTWAFLTR 60

Query: 114 VAMRSHLWGHHPTITTTYNRVQFRLTTHDV-------SGISDADIMMASRIEKYIKQI 164
           V+MRSHLWGHHP I T+Y  V+  L THD+       S +SD D+ MA RI+ YI ++
Sbjct: 61  VSMRSHLWGHHPLIHTSYTWVKLELHTHDIDPKDGAHSQLSDIDVRMAKRIDSYIDEM 118


>SPAC27D7.04 [K] KOG4073 Pterin carbinolamine dehydratase PCBD/dimerization
           cofactor of HNF1
          Length = 96

 Score = 65.1 bits (157), Expect = 5e-11
 Identities = 26/71 (36%), Positives = 44/71 (61%)

Query: 92  ENELVRDYKFRDFEETWSFLNKVAMRSHLWGHHPTITTTYNRVQFRLTTHDVSGISDADI 151
           + +L + ++F++F E W F++ VA+R+    HHP  T  YN+V   LTTHD  G+++ D+
Sbjct: 24  DTKLFKSFRFKNFIEAWGFMSCVALRAQQLNHHPEWTNVYNKVDITLTTHDTKGLTEKDL 83

Query: 152 MMASRIEKYIK 162
            +A  I+   K
Sbjct: 84  KLAEFIDTLAK 94


>CE18240 [K] KOG4073 Pterin carbinolamine dehydratase PCBD/dimerization
           cofactor of HNF1
          Length = 178

 Score = 63.9 bits (154), Expect = 1e-10
 Identities = 27/82 (32%), Positives = 48/82 (57%), Gaps = 2/82 (2%)

Query: 84  KLPKWRLMENE--LVRDYKFRDFEETWSFLNKVAMRSHLWGHHPTITTTYNRVQFRLTTH 141
           K   W+L+E    + +++ F+DF E + F+ +V +++    HHP     YN+V   L+TH
Sbjct: 97  KTAGWKLVEGRDAIQKEFHFKDFNEAFGFMTRVGLKAEKMDHHPEWFNVYNKVDITLSTH 156

Query: 142 DVSGISDADIMMASRIEKYIKQ 163
           D  G+S  D+ +A+ IE  +K+
Sbjct: 157 DCGGLSPNDVKLATFIESIVKK 178


>7301813 [K] KOG4073 Pterin carbinolamine dehydratase PCBD/dimerization
           cofactor of HNF1
          Length = 101

 Score = 58.5 bits (140), Expect = 4e-09
 Identities = 27/73 (36%), Positives = 42/73 (56%), Gaps = 2/73 (2%)

Query: 88  WRLMENE--LVRDYKFRDFEETWSFLNKVAMRSHLWGHHPTITTTYNRVQFRLTTHDVSG 145
           W L+E    + + +  +DF + +SF+  VA+ +    HHP     YN+V   L+THDV G
Sbjct: 22  WTLVEGRDAIFKQFVLKDFNQAFSFMTGVALLAEKINHHPEWFNCYNKVDVTLSTHDVGG 81

Query: 146 ISDADIMMASRIE 158
           +S  DI MA+ +E
Sbjct: 82  LSSQDIRMATHLE 94


>Hs4557831 [K] KOG4073 Pterin carbinolamine dehydratase PCBD/dimerization
           cofactor of HNF1
          Length = 104

 Score = 57.8 bits (138), Expect = 8e-09
 Identities = 25/74 (33%), Positives = 44/74 (58%), Gaps = 2/74 (2%)

Query: 88  WRLMENE--LVRDYKFRDFEETWSFLNKVAMRSHLWGHHPTITTTYNRVQFRLTTHDVSG 145
           W  +E    + + + F+DF   + F+ +VA+++    HHP     YN+V   L+TH+ +G
Sbjct: 25  WNELEGRDAIFKQFHFKDFNRAFGFMTRVALQAEKLDHHPEWFNVYNKVHITLSTHECAG 84

Query: 146 ISDADIMMASRIEK 159
           +S+ DI +AS IE+
Sbjct: 85  LSERDINLASFIEQ 98


>Hs14149825 [K] KOG4073 Pterin carbinolamine dehydratase PCBD/dimerization
           cofactor of HNF1
          Length = 130

 Score = 55.1 bits (131), Expect = 5e-08
 Identities = 21/65 (32%), Positives = 40/65 (61%)

Query: 95  LVRDYKFRDFEETWSFLNKVAMRSHLWGHHPTITTTYNRVQFRLTTHDVSGISDADIMMA 154
           + +++ F +F + + F+++VA+++    HHP     YN+VQ  LT+HD   ++  D+ +A
Sbjct: 61  IYKEFSFHNFNQAFGFMSRVALQAEKMNHHPEWFNVYNKVQITLTSHDCGELTKKDVKLA 120

Query: 155 SRIEK 159
             IEK
Sbjct: 121 KFIEK 125


  Database: KOG eukaryal database 04/03
    Posted date:  Apr 14, 2003  1:07 PM
  Number of letters in database: 30,389,216
  Number of sequences in database:  60,738
  
Lambda     K      H
   0.326    0.139    0.413 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,588,974
Number of Sequences: 60738
Number of extensions: 280916
Number of successful extensions: 949
Number of sequences better than 1.0e-05: 6
Number of HSP's better than  0.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 942
Number of HSP's gapped (non-prelim): 6
length of query: 175
length of database: 30,389,216
effective HSP length: 99
effective length of query: 76
effective length of database: 24,376,154
effective search space: 1852587704
effective search space used: 1852587704
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)