ORF STATUS Function Best COG Functional category Pathways and functional systems
r_klactVI6846 good R KOG2914 General function prediction only Predicted haloacid-halidohydrolase and related hydrolases
Only best alignment is shown:
BLASTP 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= r_klactVI6846 2386886 2387551 222
(222 letters)
Database: KOG eukaryal database 04/03
60,738 sequences; 30,389,216 total letters
Searching..................................................done
Color Key for Alignment Scores: 
Score E
Sequences producing significant alignments: (bits) Value
SPCC1020.07 [R] KOG2914 Predicted haloacid-halidohydrolase and r... 172 3e-43
SPAC4C5.01 [R] KOG2914 Predicted haloacid-halidohydrolase and re... 139 3e-33
Hs18595481 [R] KOG2914 Predicted haloacid-halidohydrolase and re... 119 3e-27
Hs6912346 [R] KOG2914 Predicted haloacid-halidohydrolase and rel... 115 4e-26
7295702 [R] KOG2914 Predicted haloacid-halidohydrolase and relat... 115 4e-26
7296084 [R] KOG2914 Predicted haloacid-halidohydrolase and relat... 103 2e-22
At4g25840 [R] KOG2914 Predicted haloacid-halidohydrolase and rel... 102 3e-22
At5g57440 [R] KOG2914 Predicted haloacid-halidohydrolase and rel... 100 3e-21
7296085 [R] KOG2914 Predicted haloacid-halidohydrolase and relat... 89 5e-18
CE27198 [R] KOG2914 Predicted haloacid-halidohydrolase and relat... 74 1e-13
YKL033w-a [R] KOG2914 Predicted haloacid-halidohydrolase and rel... 62 5e-10
7296086 [R] KOG2914 Predicted haloacid-halidohydrolase and relat... 54 1e-07
At4g21470_1 [R] KOG2914 Predicted haloacid-halidohydrolase and r... 51 1e-06
7296087 [R] KOG2914 Predicted haloacid-halidohydrolase and relat... 50 2e-06
>SPCC1020.07 [R] KOG2914 Predicted haloacid-halidohydrolase and related
hydrolases
Length = 236
Score = 172 bits (436), Expect = 3e-43
Identities = 94/226 (41%), Positives = 137/226 (60%), Gaps = 7/226 (3%)
Query: 1 MDGLLINTEDMYTVAINKVLEAHDKGTMSWDLKLQLQGLPGPEAGRKVIEYYDLPLSFEE 60
MDGLL++TE +YT + N +L+ ++KG S ++K ++ G EA R +++ + L+ EE
Sbjct: 10 MDGLLVDTESIYTKSTNIILKRYNKGPFSMEVKAKMMGRTSKEASRIFLDWSGIDLTCEE 69
Query: 61 FDTLNRKHQAILWPTSKFLPGTLELIAYLKERNVPIALCTSSTVEKFHHKTSHLTEAFKA 120
+ L R+ QA LW +K LPG + L++ LK N+PIAL TSS F K++HL+ F
Sbjct: 70 YIALQRETQAELWRHTKPLPGVMNLLSKLKSLNIPIALATSSDTHNFEKKSAHLSHLFDH 129
Query: 121 FD-VIITGDDPRIPKGRGKPFPDIWQLGLKELN----AKFNTDIESNECLVFEDGIPGVN 175
FD IITGDDPR+P GRGKP PDIW + LK +N A+ +I CLVFED I GV
Sbjct: 130 FDGNIITGDDPRLPVGRGKPHPDIWFIALKMINDKRKAQGQAEILPENCLVFEDSITGVQ 189
Query: 176 AGKSFGAYVIWVPHKDAIAL--VKDHKILGDRGEMLESLEHFDRSK 219
+G++ G V+WVP + + + + + SLE+FD +K
Sbjct: 190 SGRAAGMKVVWVPDVNILPFFSLSPEQAADKHITKVLSLENFDVTK 235
>SPAC4C5.01 [R] KOG2914 Predicted haloacid-halidohydrolase and related
hydrolases
Length = 246
Score = 139 bits (350), Expect = 3e-33
Identities = 82/227 (36%), Positives = 125/227 (54%), Gaps = 10/227 (4%)
Query: 1 MDGLLINTEDMYTVAINKVLEAHDKGTMSWDLKLQLQGLPGPEAGRKVIEYYDLPLSFEE 60
MDGLL+++E +YT N +L+ + K + +K Q+ G PG A + VI++ ++P++ ++
Sbjct: 15 MDGLLVDSETIYTKTTNLILDRYGKDPLPISVKAQMMGRPGSAAAKVVIDWSNIPMTPQQ 74
Query: 61 FDTLNRKHQAILWPTSKFLPGTLELIAYLKERNVPIALCTSSTVEKFHHKTSHLTEAFKA 120
F + +A W + K +PG LI L + I +CT KT+HL F+
Sbjct: 75 FVDEQQVIRAKFWSSLKPMPGAESLINNLSNHGIDIGVCTHPYA---IIKTAHLKHIFEK 131
Query: 121 FDV-IITGDDPRIPKGRGKPFPDIWQLGLKELNAKFN----TDIESNECLVFEDGIPGVN 175
F +ITGD+P I GRGKPFPDIW L +N + ++C+ FED IPGV
Sbjct: 132 FGKNVITGDNPSIAPGRGKPFPDIWLKVLNLINESRKQRGLKALTPSQCIAFEDSIPGVK 191
Query: 176 AGKSFGAYVIWVPHKDAIALVKD--HKILGDRGEMLESLEHFDRSKF 220
+ K+ G +VIWVP LV D ++I+ + E L SL FD +K+
Sbjct: 192 SAKAAGMHVIWVPDAAIKNLVGDQLNEIVDSQCETLPSLSEFDINKY 238
>Hs18595481 [R] KOG2914 Predicted haloacid-halidohydrolase and related
hydrolases
Length = 214
Score = 119 bits (299), Expect = 3e-27
Identities = 78/222 (35%), Positives = 114/222 (51%), Gaps = 12/222 (5%)
Query: 1 MDGLLINTEDMYTVAINKVLEAHDKGTMSWDLKLQLQGLPGPEAGRKVIEYYDLPLSFEE 60
MDGLL++TE +Y+V ++ +DK SWD+K + G EA + +I+ LP+S EE
Sbjct: 1 MDGLLLDTERLYSVVFQEICNRYDK-KYSWDVKSLVMGKKALEAAQIIIDVLQLPMSKEE 59
Query: 61 FDTLNRKHQAILWPTSKFLPGTLELIAYLKERNVPIALCTSSTVEKFHHKTSHLTEAFKA 120
++ ++PT+ +PG +LI +L++ +P AL TSS F KTS E F
Sbjct: 60 LVEESQTKLKEVFPTAALMPGAEKLIIHLRKHGIPFALATSSGSASFDMKTSRHKEFFSL 119
Query: 121 FDVIITGDDPRIPKGRGKPFPDIWQLGLKELNAKFNTDIESNECLVFEDGIPGVNAGKSF 180
F I+ GDDP + GKP PDI+ K +F+ +CLVFED GV A +
Sbjct: 120 FSHIVLGDDPEVQ--HGKPDPDIFLACAK----RFSPPPAMEKCLVFEDAPNGVEAALAA 173
Query: 181 GAYVIWVPHKDAIALVKDHKILGDRGEMLESLEHFDRSKFGL 222
G V+ VP + + L +L SL+ F FGL
Sbjct: 174 GMQVVMVPDGNLSRDLTTKATL-----VLNSLQDFQPELFGL 210
>Hs6912346 [R] KOG2914 Predicted haloacid-halidohydrolase and related
hydrolases
Length = 214
Score = 115 bits (289), Expect = 4e-26
Identities = 76/222 (34%), Positives = 112/222 (50%), Gaps = 12/222 (5%)
Query: 1 MDGLLINTEDMYTVAINKVLEAHDKGTMSWDLKLQLQGLPGPEAGRKVIEYYDLPLSFEE 60
MDGLL++TE +Y+V ++ +DK SWD+K + G EA + +I+ LP+S EE
Sbjct: 1 MDGLLLDTERLYSVVFQEICNRYDK-KYSWDVKSLVMGKKALEAAQIIIDVLQLPMSKEE 59
Query: 61 FDTLNRKHQAILWPTSKFLPGTLELIAYLKERNVPIALCTSSTVEKFHHKTSHLTEAFKA 120
++ ++P + +PG +LI +L++ +P AL TSS F KTS E F
Sbjct: 60 LVEESQTKLKEVFPMAALMPGAEKLIIHLRKHGIPFALATSSGSASFDMKTSRHKEFFSL 119
Query: 121 FDVIITGDDPRIPKGRGKPFPDIWQLGLKELNAKFNTDIESNECLVFEDGIPGVNAGKSF 180
F I+ GDDP + GKP PDI+ K +F+ +CLVFED GV A +
Sbjct: 120 FSHIVLGDDPEVQ--HGKPDPDIFLACAK----RFSPPPAMEKCLVFEDAPNGVEAALAA 173
Query: 181 GAYVIWVPHKDAIALVKDHKILGDRGEMLESLEHFDRSKFGL 222
G + VP + + L +L SL+ F FGL
Sbjct: 174 GMQAVMVPDGNLSRDLTTKATL-----VLNSLQDFQPELFGL 210
>7295702 [R] KOG2914 Predicted haloacid-halidohydrolase and related
hydrolases
Length = 231
Score = 115 bits (289), Expect = 4e-26
Identities = 75/222 (33%), Positives = 112/222 (49%), Gaps = 11/222 (4%)
Query: 1 MDGLLINTEDMYTVAINKVLEAHDKGTMSWDLKLQLQGLPGPEAGRKVIEYYDLPLSFEE 60
MDGLL++TE +YTVA +LE + K T +++K Q+ GL R ++E+Y+LP+S+EE
Sbjct: 16 MDGLLLDTERLYTVATEMILEPYGK-TYPFEIKEQVMGLQTEPLARFMVEHYELPMSWEE 74
Query: 61 FDTLNRKHQAILWPTSKFLPGTLELIAYLKERNVPIALCTSSTVEKFHHKTSHLTEAFKA 120
+ R + IL ++ +PG L+ +L VP L TSS + KT+ E F
Sbjct: 75 YARQQRANTEILMRNAQLMPGAERLLRHLHANKVPFCLATSSGADMVELKTAQHRELFSL 134
Query: 121 FDVIITGDDPRIPKGRGKPFPDIWQLGLKELNAKFNTDIESNECLVFEDGIPGVNAGKSF 180
F+ + G + GKP PDI+ + +F + ++CLVFED GV A S
Sbjct: 135 FNHKVCGSSDK-EVVNGKPAPDIFLVAA----GRFGVPPKPSDCLVFEDSPNGVTAANSA 189
Query: 181 GAYVIWVPHKDAIALVKDHKILGDRGEMLESLEHFDRSKFGL 222
G V+ VP H ++L SL F +FGL
Sbjct: 190 GMQVVMVPDPRLSQEKTSHAT-----QVLASLADFKPEQFGL 226
>7296084 [R] KOG2914 Predicted haloacid-halidohydrolase and related
hydrolases
Length = 240
Score = 103 bits (256), Expect = 2e-22
Identities = 68/221 (30%), Positives = 107/221 (47%), Gaps = 10/221 (4%)
Query: 2 DGLLINTEDMYTVAINKVLEAHDKGTMSWDLKLQLQGLPGPEAGRKVIEYYDLPLSFEEF 61
DG LI++E +Y + +L + K D + Q G+P + +++ LPLS EF
Sbjct: 18 DGTLIDSEGIYLKTVQDLLAKYGKTYTKVD-QTQHMGMPVGTFSQHIVKDLKLPLSPAEF 76
Query: 62 DTLNRKHQAILWPTSKFLPGTLELIAYLKERNVPIALCTSSTVEKFHHKTSHLTEAFKAF 121
+ LPG +LI +L E +P + TSS + F K + F AF
Sbjct: 77 QKEFEAAVDKSMGSVALLPGVRDLILHLHEYRIPFCIATSSFRKLFKVKAESFKDIFLAF 136
Query: 122 DVIITGDDPRIPKGRGKPFPDIWQLGLKELNAKFNTDIESNECLVFEDGIPGVNAGKSFG 181
++ GDDP + GRGKP+PDI+ L ++FN + +CL+FED G+ GK+ G
Sbjct: 137 HHVVCGDDPALGPGRGKPYPDIYLLAA----SRFNPPADPKKCLIFEDAPVGLIGGKAAG 192
Query: 182 AYVIWVPHKDAIALVKDHKILGDRGEMLESLEHFDRSKFGL 222
+ VI++P + K + +L+S+ F FGL
Sbjct: 193 SQVIFIPTDNVSKQQKKGATM-----VLKSMADFKPELFGL 228
>At4g25840 [R] KOG2914 Predicted haloacid-halidohydrolase and related
hydrolases
Length = 221
Score = 102 bits (255), Expect = 3e-22
Identities = 74/225 (32%), Positives = 110/225 (48%), Gaps = 15/225 (6%)
Query: 1 MDGLLINTEDMYTVAINKVLEAHDKGTMSWDLKLQLQGLPGPEAGRKVIEYYDLP--LSF 58
MDGLL++TE YT K+L ++K T W LK ++ G EA R ++ + LS
Sbjct: 1 MDGLLLDTEKFYTEVQEKILARYNK-TFDWSLKAKMMGRKAIEAARLFVDESGISDSLSA 59
Query: 59 EEFDTLNRKHQAILWPTSKFLPGTLELIAYLKERNVPIALCTSSTVEKFHHKTSHLTEAF 118
E+F L+PTS +PG L+ +L + +PI + T + F KT E F
Sbjct: 60 EDFIVERESMLQDLFPTSDLMPGASRLLRHLHGKGIPICIATGTHTRHFDLKTQRHRELF 119
Query: 119 KAFDVIITGDDPRIPKGRGKPFPDIWQLGLKELNAKF-NTDIESNECLVFEDGIPGVNAG 177
++ GDDP + + GKP PD G + +F + ++ + LVFED GV A
Sbjct: 120 SLMHHVVRGDDPEVKE--GKPAPD----GFLAASRRFEDGPVDPRKVLVFEDAPSGVQAA 173
Query: 178 KSFGAYVIWVPHKDAIALVKDHKILGDRGEMLESLEHFDRSKFGL 222
K+ G VI VP L K + + D ++L SL F ++GL
Sbjct: 174 KNAGMNVIMVPDS---RLDKSYCNVAD--QVLASLLDFKPEEWGL 213
>At5g57440 [R] KOG2914 Predicted haloacid-halidohydrolase and related
hydrolases
Length = 220
Score = 99.8 bits (247), Expect = 3e-21
Identities = 69/224 (30%), Positives = 109/224 (47%), Gaps = 13/224 (5%)
Query: 1 MDGLLINTEDMYTVAINKVLEAHDKGTMSWDLKLQLQGLPGPEAGRKVIEYYDLPLSFEE 60
MDGLL++TE YT + +++ A W LK ++ G EA R +E + S
Sbjct: 1 MDGLLLDTEKFYT-EVQEIILARFNKKFDWSLKAKMMGRKAIEAARIFVEESGISDSLSA 59
Query: 61 FDTLNRKHQAI--LWPTSKFLPGTLELIAYLKERNVPIALCTSSTVEKFHHKTSHLTEAF 118
D L + + L+PTS+ +PG LI +L +N+PI + T + + KT E F
Sbjct: 60 EDFLVERESMLQDLFPTSELMPGASRLIKHLHVKNIPICIATGTHTRHYDLKTQRHRELF 119
Query: 119 KAFDVIITGDDPRIPKGRGKPFPDIWQLGLKELNAKFNTDIESNECLVFEDGIPGVNAGK 178
++ GDDP + +GKP PD + + + ++S + LVFED GV A K
Sbjct: 120 SLMHHVVRGDDPEVK--QGKPAPDGFLAAARRFK---DGPVDSQKVLVFEDAPSGVLAAK 174
Query: 179 SFGAYVIWVPHKDAIALVKDHKILGDRGEMLESLEHFDRSKFGL 222
+ G V+ VP L H+ + D +++ SL F ++GL
Sbjct: 175 NAGMNVVMVPDP---RLDISHQDVAD--QIITSLVDFKPEEWGL 213
>7296085 [R] KOG2914 Predicted haloacid-halidohydrolase and related
hydrolases
Length = 218
Score = 89.0 bits (219), Expect = 5e-18
Identities = 62/216 (28%), Positives = 100/216 (45%), Gaps = 13/216 (6%)
Query: 8 TEDMYTVAINKVLEAHDKGTMSWDLKLQLQGLPGPEAGRKVIEYYDLPLSFEEFDTLNRK 67
+E + T + ++L+ + T S+DLK++ G P E ++ ++LP S EF+
Sbjct: 12 SERLRTETVQRILDPYGH-TYSFDLKMRCMGKPDSEQAALIVNTFNLPFSMTEFENQQEL 70
Query: 68 HQAILWPTSKFLPGTLELIAYLKERNVPIALCTSSTVEKFHHKTSHLTEAFKAF-DVIIT 126
+ +PG L+ +LK N+P+A+ + + F KT + F F V+++
Sbjct: 71 QCRGKMGFIRLMPGVERLLHHLKAFNIPMAIASGCCRDSFRIKTRRHSRPFDVFHHVVLS 130
Query: 127 GDDPRIPKGRGKPFPDIWQLGLKELNAKFNTDIESNECLVFEDGIPGVNAGKSFGAYVIW 186
G D + RGKP PD++ ++F E ++CLVFE + G+ A S G V+
Sbjct: 131 GSDEEVK--RGKPAPDVF----LTTASRFEESPEPSKCLVFESSLVGMEAALSAGMQVVL 184
Query: 187 VPHKDAIALVKDHKILGDRGEMLESLEHFDRSKFGL 222
VP H L L SLE F FGL
Sbjct: 185 VPDPLVSFRASAHATL-----RLRSLEGFKPQYFGL 215
>CE27198 [R] KOG2914 Predicted haloacid-halidohydrolase and related
hydrolases
Length = 233
Score = 74.3 bits (181), Expect = 1e-13
Identities = 62/224 (27%), Positives = 101/224 (44%), Gaps = 9/224 (4%)
Query: 2 DGLLINTEDMYTVAINKVLEAHDKGTMSWDLKLQLQGLPGPEAGRKVIEYYDLP--LSFE 59
DGLL++TE YT A ++L + + DLK + G E+ R +I + ++ E
Sbjct: 13 DGLLVDTESAYTEANMELLRKYGH-VFTMDLKRRQMGKRHDESIRWLINELKIGDLVTPE 71
Query: 60 EFDTLNRKHQAILWPTSKFLPGTLELIAYLKERNVPIALCTSSTVEKFHHKTSHLTEAFK 119
E+ + ++ S +PG +L+ +L VP+ALCT S F K + +
Sbjct: 72 EYSRQYDELLIEMFKRSPAMPGAEKLVRHLLHTGVPVALCTGSCSRTFPTKLDNHKDWVN 131
Query: 120 AFDV-IITGDDPRIPKGRGKPFPDIWQLGLKELNAKFNTDIESNECLVFEDGIPGVNAGK 178
+ +++GDDP + GKP PD + + +K +++ LVFED GV +
Sbjct: 132 MIKLQVLSGDDPEVK--HGKPHPDPFLVTMKRFP---QVPESADKVLVFEDSYNGVLSAL 186
Query: 179 SFGAYVIWVPHKDAIALVKDHKILGDRGEMLESLEHFDRSKFGL 222
G + VP + D + +L SLE F FGL
Sbjct: 187 DAGMQCVMVPERSIFDPDSDPEFKNRVTVILNSLEQFKPEDFGL 230
>YKL033w-a [R] KOG2914 Predicted haloacid-halidohydrolase and related
hydrolases
Length = 60
Score = 62.4 bits (150), Expect = 5e-10
Identities = 26/43 (60%), Positives = 35/43 (80%)
Query: 1 MDGLLINTEDMYTVAINKVLEAHDKGTMSWDLKLQLQGLPGPE 43
MDGLLINTED+YT +N+ L KG ++WD+K++LQGLPGP+
Sbjct: 14 MDGLLINTEDIYTETLNETLAEFGKGPLTWDVKIKLQGLPGPK 56
>7296086 [R] KOG2914 Predicted haloacid-halidohydrolase and related
hydrolases
Length = 305
Score = 54.3 bits (129), Expect = 1e-07
Identities = 44/191 (23%), Positives = 80/191 (41%), Gaps = 8/191 (4%)
Query: 1 MDGLLINTEDMYTVAINKVLEAHDKGTMSWDLKLQLQGLPGPEAGRKVIEYYDLPLSFEE 60
++ + +T +Y A+ +++ +DK L +Q + E D+P+S+E
Sbjct: 34 LESAVFDTRHVYRKALKELVRCYDKRIPDI-LHVQSGPMTISEMSELFCRKLDIPMSWES 92
Query: 61 FDTLNRKHQAILWPTSKFLPGTLELIAYLKERNVPIALCTSSTVEKFHHKTSHLTEAFKA 120
F + + L F+ G L+ +L+ + + L TSS + K + F+
Sbjct: 93 FRYELNERTSHLIANPPFMDGIERLVPHLRNSCMELGLITSSNEANYCSKIRGREDFFEN 152
Query: 121 FDVIITGDDPRIPKGRGKPFPDIWQLGLKELNAKFNTDIESNECLVFEDGIPGVNAGKSF 180
F ++ DDP + KP PD++ + + L D + LVF+ GV A
Sbjct: 153 FSTVVCADDPEL--RAPKPEPDVYLIAMSRLG-----DAGPDCTLVFDGTPKGVQAASDA 205
Query: 181 GAYVIWVPHKD 191
VI + KD
Sbjct: 206 RLPVIMLAEKD 216
>At4g21470_1 [R] KOG2914 Predicted haloacid-halidohydrolase and related
hydrolases
Length = 140
Score = 51.2 bits (121), Expect = 1e-06
Identities = 36/115 (31%), Positives = 57/115 (49%), Gaps = 5/115 (4%)
Query: 1 MDGLLINTEDMYTVAINKVLEAHDKGTMSWDLK--LQLQGLPGPEAGRKVIEYYDLPLSF 58
+DG LINT+ + + K L + K WD + L++ G EA ++E Y+LP
Sbjct: 18 LDGTLINTDGVVGDILRKYLCKYGK---QWDGRESLKIVGKTPVEAATTIVEDYELPCKV 74
Query: 59 EEFDTLNRKHQAILWPTSKFLPGTLELIAYLKERNVPIALCTSSTVEKFHHKTSH 113
+EF++ + K LPG LI +LK VP+AL ++S+ K S+
Sbjct: 75 DEFNSEFYPLFSAQMDKIKSLPGANRLIRHLKCHGVPVALASNSSRANIESKISY 129
>7296087 [R] KOG2914 Predicted haloacid-halidohydrolase and related
hydrolases
Length = 279
Score = 50.4 bits (119), Expect = 2e-06
Identities = 48/222 (21%), Positives = 94/222 (41%), Gaps = 13/222 (5%)
Query: 1 MDGLLINTEDMYTVAINKVLEAHDKGTMSWDLKLQLQGLPGPEAGRKVIEYYDLPLSFEE 60
++ + +T +Y A+ ++ +++K + + ++ + E + DLP+S+E
Sbjct: 14 LESAVFDTRHVYKRAVIELAASYNK-IIPEAVLIKSGPMETAEMAELICRKCDLPVSWES 72
Query: 61 FDTLNRKHQAILWPTSKFLPGTLELIAYLKERNVPIALCTSSTVEKFHHKTSHLTEAFKA 120
F + + L +PG L+ +L + + L TS + + K + F+
Sbjct: 73 FRFQLNERTSDLIANPTLMPGVERLVTHLGRCCMGLGLITSCSESMYCTKIRDREDFFQN 132
Query: 121 FDVIITGDDPRIPKGRGKPFPDIWQLGLKELNAKFNTDIESNECLVFEDGIPGVNAGKSF 180
F +I DD + KP PD++ + ++ L D + LVF+ GV A
Sbjct: 133 FSSVICADDADLK--APKPEPDVYLIAMRRLG-----DAGPDCTLVFDGTPKGVQAATDA 185
Query: 181 GAYVIWVPHKDAIALVKDHKILGDRGEMLESLEHFDRSKFGL 222
V+ + KD + L LE+LE FD ++F +
Sbjct: 186 RLPVVMLAEKDLPCCWSELATL-----RLETLEEFDPAEFNM 222
Database: KOG eukaryal database 04/03
Posted date: Apr 14, 2003 1:07 PM
Number of letters in database: 30,389,216
Number of sequences in database: 60,738
Lambda K H
0.319 0.140 0.425
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 14,688,708
Number of Sequences: 60738
Number of extensions: 662186
Number of successful extensions: 1363
Number of sequences better than 1.0e-05: 14
Number of HSP's better than 0.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 1333
Number of HSP's gapped (non-prelim): 14
length of query: 222
length of database: 30,389,216
effective HSP length: 102
effective length of query: 120
effective length of database: 24,193,940
effective search space: 2903272800
effective search space used: 2903272800
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)