ORF STATUS Function Best COG Functional category Pathways and functional systems
r_klactVI6896 check: MH R KOG4299 General function prediction only PHD Zn-finger protein
Only best alignment is shown:
BLASTP 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= r_klactVI6896 2403334 2401466 -623
(623 letters)
Database: KOG eukaryal database 04/03
60,738 sequences; 30,389,216 total letters
Searching..................................................done
Color Key for Alignment Scores: 
Score E
Sequences producing significant alignments: (bits) Value
YMR075w [R] KOG4299 PHD Zn-finger protein 364 e-100
SPAC2F7.07c [R] KOG4299 PHD Zn-finger protein 150 7e-36
SPAC16C9.05 [R] KOG4299 PHD Zn-finger protein 92 2e-18
7290703_1 [R] KOG4299 PHD Zn-finger protein 72 3e-12
Hs22064454 [R] KOG4299 PHD Zn-finger protein 70 1e-11
Hs4557291 [R] KOG0383 Predicted helicase 66 1e-10
7293730 [R] KOG0383 Predicted helicase 66 2e-10
CE17716 [R] KOG0383 Predicted helicase 64 5e-10
Hs4557453 [R] KOG0383 Predicted helicase 64 9e-10
Hs4557295 [R] KOG0383 Predicted helicase 61 6e-09
Hs4557293 [R] KOG0383 Predicted helicase 61 6e-09
CE03657 [R] KOG0383 Predicted helicase 60 1e-08
Hs4557451 [R] KOG0383 Predicted helicase 59 2e-08
Hs20533808 [R] KOG0383 Predicted helicase 59 2e-08
Hs17449320 [O] KOG2177 Predicted E3 ubiquitin ligase 59 2e-08
Hs14971415 [O] KOG2177 Predicted E3 ubiquitin ligase 59 2e-08
7293795 [R] KOG0383 Predicted helicase 58 4e-08
Hs14971413 [O] KOG2177 Predicted E3 ubiquitin ligase 58 5e-08
Hs14971411 [O] KOG2177 Predicted E3 ubiquitin ligase 58 5e-08
At5g44800 [R] KOG0383 Predicted helicase 57 8e-08
7291946 [BK] KOG1473 Nucleosome remodeling factor subunit NURF30... 57 8e-08
Hs4758336 [BK] KOG1473 Nucleosome remodeling factor subunit NURF... 56 2e-07
Hs19923462 [R] KOG0383 Predicted helicase 55 3e-07
YJR119c [R] KOG1246 DNA-binding protein jumonji/RBP2/SMCY contai... 52 3e-06
Hs19923586 [K] KOG1081 Transcription factor NSD1 and related SET... 52 3e-06
Hs17986256 [O] KOG2177 Predicted E3 ubiquitin ligase 51 5e-06
Hs17986254 [O] KOG2177 Predicted E3 ubiquitin ligase 51 5e-06
Hs6912512 [B] KOG2747 Histone acetyltransferase (MYST family) 51 6e-06
Hs5803098 [B] KOG2747 Histone acetyltransferase (MYST family) 51 6e-06
At5g22760 [BK] KOG1473 Nucleosome remodeling factor subunit NURF... 51 6e-06
>YMR075w [R] KOG4299 PHD Zn-finger protein
Length = 684
Score = 364 bits (934), Expect = e-100
Identities = 230/680 (33%), Positives = 354/680 (51%), Gaps = 91/680 (13%)
Query: 2 TKNMEVTRPKRSGTANVDYNLKKRRIIPSDDYPTKXXXXXXXXXXXXXXXXXXGPVIL-K 60
+ + E RPKR + NV+Y+LK+R+II S+ +L K
Sbjct: 28 SSSKEKKRPKRLSSQNVNYDLKRRKIITSEGIERSFKNEHSNLAVEDNIPEEEPKELLEK 87
Query: 61 DSNGNIT-FQEPPV--HDPINAMTGTPLSQKPKGXXXXXXXXXXXXXXXXXXXXXXXXXX 117
DS GNI EP D ++TG PL++ P
Sbjct: 88 DSKGNIIKLNEPSTISEDSKVSVTGLPLNKGPS-----------EKIKRESLWNYRKNLG 136
Query: 118 XXXXXXXXXXXXXXXILQALKSSMEAKYEGQLQTEKSNELTVQSHER--IGANTPTKHNK 175
Q K+ + L+T + +T +S+ R IG N N+
Sbjct: 137 GQSNNSEMTLVPSKRFTQVPKNFQDLN-RNDLKTFLTENMTEESNIRSTIGWNGDII-NR 194
Query: 176 NSGIKQEADSDFMLQDPIRNSPSKSIALKMAKRLKSTKDKDTKLFGQNDKASHLHIPE-I 234
+ E+D D N +I K+ +T D +KLFGQN S + E I
Sbjct: 195 TRDREPESDRD--------NKKLSNIRTKIILSTNATYDSKSKLFGQNSIKSTSNASEKI 246
Query: 235 DPDNNK-----ENDDFCSNCHGPGVFLCCDTCPKSFHFACCNPPLDPSHLPEGDWSCDEC 289
D N EN+DFCS C+ G FLCCDTCPKSFHF C +PP+DP++LP+GDW C+EC
Sbjct: 247 FRDKNNSTIDFENEDFCSACNQSGSFLCCDTCPKSFHFLCLDPPIDPNNLPKGDWHCNEC 306
Query: 290 RFKQWIKSNKYGLSSEKKLKTRFLQDHFKQPGYQLFGTLTFDLQRKNPFQFQLPSIIKST 349
+FK +I ++ +++ KK+++ F++ + ++F L F++ NP QFQLP+ IK T
Sbjct: 307 KFKIFINNS---MATLKKIESNFIKQN---NNVKIFAKLLFNIDSHNPKQFQLPNYIKET 360
Query: 350 FDSVSSGSQGEYRDEHFKENINEKQIFHSAYGQSVTRMDSYQPEYHFNQDSGELLVCYNC 409
F +V +GS+G+Y DE+ K + ++Q+F+++YGQS+T++DSY P+ H + +SG+ L+CY C
Sbjct: 361 FPAVKTGSRGQYSDENDKIPLTDRQLFNTSYGQSITKLDSYNPDTHIDSNSGKFLICYKC 420
Query: 410 GESKMGTWDHPDSQRLIMTCDYCSTPWHLDCLPLPRASLKNLGSKWKCPLHAPLPKSYKR 469
++++G+W HP++ RLIMTCDYC TPWHLDC +PRAS KNLGSKWKCPLH+P K YK+
Sbjct: 421 NQTRLGSWSHPENSRLIMTCDYCQTPWHLDC--VPRASFKNLGSKWKCPLHSP-TKVYKK 477
Query: 470 ------------------RLARGKQKYIVLP---IGSRNNGDTEIA-----IDAD---SW 500
RL K + P IG +NNG+ +I D D +
Sbjct: 478 IHHCQEDNSVNYKVWKKQRLINKKNQLYYEPLQKIGYQNNGNIQIIPTTSHTDYDFNQDF 537
Query: 501 TLSKLTEQNVALEFLDKVYQAKRVQQFEDLCQHSTILDKLVA-----AENQTPILNDISN 555
++++ E ++ +F DK+Y++K VQ+ + +++DKLV+ ++ ++ DI++
Sbjct: 538 KITQIDENSIKYDFFDKIYKSKMVQKRKLFQFQESLIDKLVSNGSQNGNSEDNMVKDIAS 597
Query: 556 LLYFQT--------------SGTLKRLWDFKELCKISEQQLLKEKAKIQPIDESELTILQ 601
L+YFQ S L++LWD KEL + L + + E+ L
Sbjct: 598 LIYFQVSNNDKSSNNKSASKSNNLRKLWDLKELTNVVVPNEL-DSIQFNDFSSDEIKHLL 656
Query: 602 KLKTLLESKPKKEVLEFFKL 621
LK ++ESKPK+E+L+F +
Sbjct: 657 YLKKIIESKPKEELLKFLNI 676
>SPAC2F7.07c [R] KOG4299 PHD Zn-finger protein
Length = 607
Score = 150 bits (378), Expect = 7e-36
Identities = 111/408 (27%), Positives = 185/408 (45%), Gaps = 51/408 (12%)
Query: 149 LQTEKSNELTVQSHERIGANTPTKHNKNSGIKQEADSDFMLQDPI-------RNSPSKSI 201
L+ KS + T + I +++ K N +S F P+ N+ ++++
Sbjct: 160 LKENKSLKTTAKDLSDISSSSMKKANNSSKPLFSGKLTFKANIPVPTSEVVTENNVTRNV 219
Query: 202 AL-KMAKRLKSTKDKDTKLFGQ-NDKASHLHIPEIDPDNNKENDDFCSNCHGPGVFLCCD 259
+ K L + + + G+ D +S+ +P + + N+D+CS CHGPG FLCC+
Sbjct: 220 TVYSNQKHLGNESENFNDMEGRAEDISSNELLPTPEEYPYRYNNDYCSACHGPGNFLCCE 279
Query: 260 TCPKSFHFACCNPPLDPSHLPEGDWSCDECRFKQWIKSNKYGLSSEKKLKTRFLQDHFKQ 319
TCP SFHF C +PP++ +LP+ W C+EC+ + L +E + L+ + K+
Sbjct: 280 TCPNSFHFTCIDPPIEEKNLPDDAWYCNECK--------HHSLYNELD-EQEELESNVKE 330
Query: 320 PG--YQLFGTLTFDLQRKNPFQFQLPSIIKSTFDSVSSGSQGEYRDEHFKENINEKQIFH 377
G ++ L + NP QF LP I S F V SG GEY + +++ +
Sbjct: 331 EGTMVDVWMQLCTYIDSHNPIQFHLPHSISSFFRGVGSGVMGEYIETDVLKHLKSSR--- 387
Query: 378 SAYGQSVTRMDSYQPEYHFNQDSGELLVCYNCGESKMGTWDHPDSQRLIMTCDYCSTPWH 437
+ G+ + SG ++C+ C +S + + I+ CDYC++ WH
Sbjct: 388 RSNGEE-------RDPLLLKSKSGTPILCFRCHKSAL-------VSQSILACDYCNSYWH 433
Query: 438 LDCLPLPRASLKNLGSKWKCPLHAPLPKSYKRRLARGKQKYIVLPIGSRNNGDTEIAIDA 497
DCL P A+L + KWKCP H+ R + K + LP G +N G+ I +
Sbjct: 434 PDCLNPPLATLPSNLRKWKCPNHSDHVTPRYRLPEKAKVIRVGLPRGFKNKGNIVIDENE 493
Query: 498 DSWTLSKLTEQN---------VALEFLDKVYQ-----AKRVQQFEDLC 531
D ++ + Q L FL+++ K V+Q E LC
Sbjct: 494 DEPSVQTIQLQGKIRVVPSKPFKLNFLEQIRDNVINLRKMVEQDEQLC 541
>SPAC16C9.05 [R] KOG4299 PHD Zn-finger protein
Length = 404
Score = 92.0 bits (227), Expect = 2e-18
Identities = 78/308 (25%), Positives = 120/308 (38%), Gaps = 80/308 (25%)
Query: 146 EGQLQTEKSNELTVQSHERIGANTPTKHNKNSGIKQEADSDFMLQDPIRN--------SP 197
EG K+N LT +H + T H I Q+ + D + P++ SP
Sbjct: 28 EGPPSNFKNNSLTSSTH------SSTDHVNVLPISQDKEMD--ISSPVKKQKASYSNKSP 79
Query: 198 SKS-IALKMAKRLKS---TKDKDTKLFGQNDKASHLHIPEIDPDNNKENDDFCSNCHGPG 253
+K+ I LKS T+ + T + + KA+ N D+CS C G G
Sbjct: 80 NKAPIQKSRGSSLKSHLETESQQTPVKRRRRKATI------------RNVDYCSACGGRG 127
Query: 254 VFLCCDTCPKSFHFACCNPPLDPSHLPEGDWSCDECRFKQWIKSNKYGLSSEKKLKTRFL 313
+F+CC+ CP SFH +C PPL P ++PEG W C C K
Sbjct: 128 LFICCEGCPCSFHLSCLEPPLTPENIPEGSWFCVTCSIK--------------------- 166
Query: 314 QDHFKQPGYQLFGTLTFDLQRKNPFQFQLPSIIKSTFDSVSSGSQGEYRDEHFKENINEK 373
H + ++ L + +NP Q++LP + F +S G G Y++ + + +E
Sbjct: 167 SHHPPKHPLSIWSQLYDWIDSQNPSQYRLPDDLVHYFHGISRGDTGAYKETEGEMDTDEF 226
Query: 374 QIFHSAYGQSVTRMDSYQPEYHFNQDSGELLVCYNCGESKMGT-WDHPDSQRLIMTCDYC 432
+ G S+T L C C + MG W + C C
Sbjct: 227 SALPT--GSSIT----------------NLAYCGYCSKPSMGACW--------VYGCQLC 260
Query: 433 STPWHLDC 440
T +H +C
Sbjct: 261 DTFYHKNC 268
>7290703_1 [R] KOG4299 PHD Zn-finger protein
Length = 685
Score = 71.6 bits (174), Expect = 3e-12
Identities = 34/104 (32%), Positives = 49/104 (46%), Gaps = 6/104 (5%)
Query: 190 QDPIRNSPSKSIALKMAKRLKSTKDKDTKLFGQNDKASHLHIPEIDPDNNKENDDFCSNC 249
QDP + S SI ++ + ++ ++D K+ ++ H P N D+C C
Sbjct: 6 QDP---NASLSIMEQIKQLIRPPPNEDEKMMQRSTNTKH---PYYRRPGRGHNHDYCDAC 59
Query: 250 HGPGVFLCCDTCPKSFHFACCNPPLDPSHLPEGDWSCDECRFKQ 293
G LCCD CP SFH C +PPL +P G W C CR +
Sbjct: 60 EEGGNLLCCDRCPSSFHLQCHDPPLSEEDIPSGQWLCHSCRMSK 103
>Hs22064454 [R] KOG4299 PHD Zn-finger protein
Length = 704
Score = 70.1 bits (170), Expect = 1e-11
Identities = 29/70 (41%), Positives = 36/70 (51%), Gaps = 2/70 (2%)
Query: 232 PEIDP--DNNKENDDFCSNCHGPGVFLCCDTCPKSFHFACCNPPLDPSHLPEGDWSCDEC 289
PE +P N D C +C G LCCD CP +FH CCNPPL LP G+W C C
Sbjct: 43 PEKEPRRSGRATNHDSCDSCKEGGDLLCCDHCPAAFHLQCCNPPLSEEMLPPGEWMCHRC 102
Query: 290 RFKQWIKSNK 299
++ + K
Sbjct: 103 TVRRKKREQK 112
>Hs4557291 [R] KOG0383 Predicted helicase
Length = 545
Score = 66.2 bits (160), Expect = 1e-10
Identities = 28/74 (37%), Positives = 42/74 (55%), Gaps = 3/74 (4%)
Query: 216 DTKLFGQNDKASHLHIPEIDPDNNKENDDFCSNCHGPGVFLCCDTCPKSFHFACCNPPLD 275
+ +L Q + L +P DP +++N+D C+ C G +CCD CP++FH AC +PPL
Sbjct: 270 EARLGQQGSVPAPLALPS-DPQLHQKNEDECAVCRDGGELICCDGCPRAFHLACLSPPL- 327
Query: 276 PSHLPEGDWSCDEC 289
+P G W C C
Sbjct: 328 -REIPSGTWRCSSC 340
>7293730 [R] KOG0383 Predicted helicase
Length = 884
Score = 65.9 bits (159), Expect = 2e-10
Identities = 24/55 (43%), Positives = 35/55 (63%), Gaps = 2/55 (3%)
Query: 235 DPDNNKENDDFCSNCHGPGVFLCCDTCPKSFHFACCNPPLDPSHLPEGDWSCDEC 289
+ +++ E+ +FC C G LCCD+CP ++H C NPPLD +P+GDW C C
Sbjct: 420 EEEDDDEHQEFCRVCKDGGELLCCDSCPSAYHTFCLNPPLDT--IPDGDWRCPRC 472
Score = 62.0 bits (149), Expect = 3e-09
Identities = 40/156 (25%), Positives = 67/156 (42%), Gaps = 20/156 (12%)
Query: 138 KSSMEAKYEGQLQTEKSNELTVQSHERIGANTPTKHNKNSGIKQEADSDF-MLQDPIRNS 196
+ S + + + +E+ ++L + + + + K + + +AD+ QD +
Sbjct: 273 RDSSDEEQDASGASERDSDLEFE--RMLQKSDDSADEKEAPVSSKADNSAPAAQDDGSGA 330
Query: 197 P--SKSIALKMAKRLKS-TKDKDTKLFGQNDKASHLHIPEIDPDNNKENDDFCSNCHGPG 253
P K K+ + K K K TK F + + H E+ D+C C G
Sbjct: 331 PVVRKKAKTKIGNKFKKKNKLKKTKNFPEGEDGEH------------EHQDYCEVCQQGG 378
Query: 254 VFLCCDTCPKSFHFACCNPPLDPSHLPEGDWSCDEC 289
+ CDTCP+++H C P LD PEG WSC C
Sbjct: 379 EIILCDTCPRAYHLVCLEPELDEP--PEGKWSCPHC 412
>CE17716 [R] KOG0383 Predicted helicase
Length = 1829
Score = 64.3 bits (155), Expect = 5e-10
Identities = 27/82 (32%), Positives = 43/82 (51%), Gaps = 2/82 (2%)
Query: 208 RLKSTKDKDTKLFGQNDKASHLHIPEIDPDNNKENDDFCSNCHGPGVFLCCDTCPKSFHF 267
R+K +++ K G + A +++ EN+D+C C G L CDTCP+++H
Sbjct: 221 RIKRAAEREEKKKGALEAARAAKKAKLEKGEEAENNDYCEECKQDGELLLCDTCPRAYHT 280
Query: 268 ACCNPPLDPSHLPEGDWSCDEC 289
C + ++ PEGDWSC C
Sbjct: 281 VCIDENMEEP--PEGDWSCAHC 300
>Hs4557453 [R] KOG0383 Predicted helicase
Length = 1912
Score = 63.5 bits (153), Expect = 9e-10
Identities = 27/62 (43%), Positives = 35/62 (55%), Gaps = 5/62 (8%)
Query: 231 IPEIDPDNNKEND---DFCSNCHGPGVFLCCDTCPKSFHFACCNPPLDPSHLPEGDWSCD 287
+ E+ D +E+D +FC C G LCCDTCP S+H C NPPL +P G+W C
Sbjct: 434 LEEVGGDLEEEDDHHMEFCRVCKDGGELLCCDTCPSSYHIHCLNPPL--PEIPNGEWLCP 491
Query: 288 EC 289
C
Sbjct: 492 RC 493
Score = 59.7 bits (143), Expect = 1e-08
Identities = 36/131 (27%), Positives = 60/131 (45%), Gaps = 19/131 (14%)
Query: 171 TKHNKNSGIKQEADSDFMLQDPIRNS-----PSKSIALKMAKRLKSTKDKDTKLFGQNDK 225
+K ++S + D + D NS S S + + K+L++TK K K
Sbjct: 303 SKRKRSSSEDDDLDVESDFDDASINSYSVSDGSTSRSSRSRKKLRTTKKK---------K 353
Query: 226 ASHLHIPEIDPDNNKENDDFCSNCHGPGVFLCCDTCPKSFHFACCNPPLDPSHLPEGDWS 285
+ +D ++ D+C C G + CDTCP+++H C +P ++ + PEG WS
Sbjct: 354 KGEEEVTAVD-GYETDHQDYCEVCQQGGEIILCDTCPRAYHMVCLDPDMEKA--PEGKWS 410
Query: 286 CDECRFK--QW 294
C C + QW
Sbjct: 411 CPHCEKEGIQW 421
>Hs4557295 [R] KOG0383 Predicted helicase
Length = 254
Score = 60.8 bits (146), Expect = 6e-09
Identities = 22/50 (44%), Positives = 31/50 (62%), Gaps = 2/50 (4%)
Query: 240 KENDDFCSNCHGPGVFLCCDTCPKSFHFACCNPPLDPSHLPEGDWSCDEC 289
++N+D C+ C G +CCD CP++FH AC +PPL +P G W C C
Sbjct: 96 QKNEDECAVCRDGGELICCDGCPRAFHLACLSPPL--REIPSGTWRCSSC 143
>Hs4557293 [R] KOG0383 Predicted helicase
Length = 348
Score = 60.8 bits (146), Expect = 6e-09
Identities = 22/50 (44%), Positives = 31/50 (62%), Gaps = 2/50 (4%)
Query: 240 KENDDFCSNCHGPGVFLCCDTCPKSFHFACCNPPLDPSHLPEGDWSCDEC 289
++N+D C+ C G +CCD CP++FH AC +PPL +P G W C C
Sbjct: 96 QKNEDECAVCRDGGELICCDGCPRAFHLACLSPPL--REIPSGTWRCSSC 143
>CE03657 [R] KOG0383 Predicted helicase
Length = 1787
Score = 60.1 bits (144), Expect = 1e-08
Identities = 24/56 (42%), Positives = 33/56 (58%), Gaps = 2/56 (3%)
Query: 234 IDPDNNKENDDFCSNCHGPGVFLCCDTCPKSFHFACCNPPLDPSHLPEGDWSCDEC 289
++ + K N D+C C L CDTCP S+H C +PPL + +PEG+WSC C
Sbjct: 319 VEEEPAKANMDYCRICKETSNILLCDTCPSSYHAYCIDPPL--TEIPEGEWSCPRC 372
Score = 51.2 bits (121), Expect = 5e-06
Identities = 21/53 (39%), Positives = 32/53 (59%), Gaps = 5/53 (9%)
Query: 237 DNNKENDDFCSNCHGPGVFLCCDTCPKSFHFACCNPPLDPSHLPEGDWSCDEC 289
+N++EN C C+ G + CDTC +++H AC + ++ PEGDWSC C
Sbjct: 262 ENHQEN---CEVCNQDGELMLCDTCTRAYHVACIDENMEQP--PEGDWSCPHC 309
>Hs4557451 [R] KOG0383 Predicted helicase
Length = 1944
Score = 59.3 bits (142), Expect = 2e-08
Identities = 35/116 (30%), Positives = 51/116 (43%), Gaps = 9/116 (7%)
Query: 181 QEADSDFMLQDPIRNSPSKSIALKMAKRLKSTKDKDTKLFGQNDKASHLHIPEIDPDNNK 240
+E+D D P + K KR + + K K+ G A + + D+
Sbjct: 322 EESDLDSGSVHSASGRPDGPVRTKKLKRGRPGRKKK-KVLGCPAVAGEEEVDGYETDHQ- 379
Query: 241 ENDDFCSNCHGPGVFLCCDTCPKSFHFACCNPPLDPSHLPEGDWSCDECRFK--QW 294
D+C C G + CDTCP+++H C +P LD PEG WSC C + QW
Sbjct: 380 ---DYCEVCQQGGEIILCDTCPRAYHLVCLDPELD--RAPEGKWSCPHCEKEGVQW 430
Score = 55.1 bits (131), Expect = 3e-07
Identities = 24/61 (39%), Positives = 31/61 (50%), Gaps = 6/61 (9%)
Query: 233 EIDPDNNKENDD----FCSNCHGPGVFLCCDTCPKSFHFACCNPPLDPSHLPEGDWSCDE 288
E + + KE +D +C C G LCCD C S+H C NPPL +P G+W C
Sbjct: 442 EGEEEGEKEEEDDHMEYCRVCKDGGELLCCDACISSYHIHCLNPPL--PDIPNGEWLCPR 499
Query: 289 C 289
C
Sbjct: 500 C 500
>Hs20533808 [R] KOG0383 Predicted helicase
Length = 1954
Score = 59.3 bits (142), Expect = 2e-08
Identities = 25/53 (47%), Positives = 29/53 (54%), Gaps = 5/53 (9%)
Query: 240 KENDD---FCSNCHGPGVFLCCDTCPKSFHFACCNPPLDPSHLPEGDWSCDEC 289
+E DD FC C G LCCD CP S+H C NPPL +P G+W C C
Sbjct: 410 EEEDDHMEFCRVCKDGGELLCCDACPSSYHLHCLNPPL--PEIPNGEWLCPRC 460
Score = 57.8 bits (138), Expect = 5e-08
Identities = 26/65 (40%), Positives = 36/65 (55%), Gaps = 6/65 (9%)
Query: 234 IDPDNNKEND--DFCSNCHGPGVFLCCDTCPKSFHFACCNPPLDPSHLPEGDWSCDECRF 291
ID + E D D+C C G + CDTCP+++H C +P L+ + PEG WSC C
Sbjct: 332 IDDGDGYETDHQDYCEVCQQGGEIILCDTCPRAYHLVCLDPELEKA--PEGKWSCPHCEK 389
Query: 292 K--QW 294
+ QW
Sbjct: 390 EGIQW 394
>Hs17449320 [O] KOG2177 Predicted E3 ubiquitin ligase
Length = 1050
Score = 59.3 bits (142), Expect = 2e-08
Identities = 26/64 (40%), Positives = 38/64 (58%), Gaps = 3/64 (4%)
Query: 227 SHLHIPEIDPDNNKENDDFCSNCHGPGVFLCCDTCPKSFHFACCNPPLDPSHLPEGDWSC 286
S LH+ E +++ N+D+C+ C G LCC+ CPK FH +C P L ++ P G+W C
Sbjct: 811 SPLHVGETRKEDDP-NEDWCAVCQNGGELLCCEKCPKVFHLSCHVPTL--TNFPSGEWIC 867
Query: 287 DECR 290
CR
Sbjct: 868 TFCR 871
>Hs14971415 [O] KOG2177 Predicted E3 ubiquitin ligase
Length = 1015
Score = 59.3 bits (142), Expect = 2e-08
Identities = 26/64 (40%), Positives = 38/64 (58%), Gaps = 3/64 (4%)
Query: 227 SHLHIPEIDPDNNKENDDFCSNCHGPGVFLCCDTCPKSFHFACCNPPLDPSHLPEGDWSC 286
S LH+ E +++ N+D+C+ C G LCC+ CPK FH +C P L ++ P G+W C
Sbjct: 776 SPLHVGETRKEDDP-NEDWCAVCQNGGELLCCEKCPKVFHLSCHVPTL--TNFPSGEWIC 832
Query: 287 DECR 290
CR
Sbjct: 833 TFCR 836
>7293795 [R] KOG0383 Predicted helicase
Length = 883
Score = 58.2 bits (139), Expect = 4e-08
Identities = 31/81 (38%), Positives = 40/81 (49%), Gaps = 6/81 (7%)
Query: 210 KSTKDKDTKLFGQNDKASHLHIPEIDPDNNKENDD-FCSNCHGPGVFLCCDTCPKSFHFA 268
K D D K G KAS P+ + K D+ +C C G LCCD+CP +H
Sbjct: 4 KRGADPDWKTPG---KASKDKRPKTNAKKQKFRDEEYCKVCSDGGDLLCCDSCPSVYHRT 60
Query: 269 CCNPPLDPSHLPEGDWSCDEC 289
C +PPL +P+GDW C C
Sbjct: 61 CLSPPL--KSIPKGDWICPRC 79
>Hs14971413 [O] KOG2177 Predicted E3 ubiquitin ligase
Length = 1127
Score = 57.8 bits (138), Expect = 5e-08
Identities = 32/78 (41%), Positives = 40/78 (51%), Gaps = 7/78 (8%)
Query: 238 NNKE---NDDFCSNCHGPGVFLCCDTCPKSFHFACCNPPLDPSHLPEGDWSCDECR--FK 292
NNK+ N+D+C+ C G LCC+ CPK FH C P L P GDW C CR K
Sbjct: 879 NNKDDDPNEDWCAVCQNGGDLLCCEKCPKVFHLTCHVPTL--LSFPSGDWICTFCRDIGK 936
Query: 293 QWIKSNKYGLSSEKKLKT 310
++ + L KK KT
Sbjct: 937 PEVEYDCDNLQHSKKGKT 954
>Hs14971411 [O] KOG2177 Predicted E3 ubiquitin ligase
Length = 1110
Score = 57.8 bits (138), Expect = 5e-08
Identities = 32/78 (41%), Positives = 40/78 (51%), Gaps = 7/78 (8%)
Query: 238 NNKE---NDDFCSNCHGPGVFLCCDTCPKSFHFACCNPPLDPSHLPEGDWSCDECR--FK 292
NNK+ N+D+C+ C G LCC+ CPK FH C P L P GDW C CR K
Sbjct: 879 NNKDDDPNEDWCAVCQNGGDLLCCEKCPKVFHLTCHVPTL--LSFPSGDWICTFCRDIGK 936
Query: 293 QWIKSNKYGLSSEKKLKT 310
++ + L KK KT
Sbjct: 937 PEVEYDCDNLQHSKKGKT 954
>At5g44800 [R] KOG0383 Predicted helicase
Length = 2228
Score = 57.0 bits (136), Expect = 8e-08
Identities = 26/61 (42%), Positives = 33/61 (53%), Gaps = 5/61 (8%)
Query: 232 PEIDPDNNKENDDF---CSNCHGPGVFLCCDTCPKSFHFACCNPPLDPSHLPEGDWSCDE 288
PE + K ND C C G LCCD+CP+++H AC NPPL +P G W C +
Sbjct: 47 PERNSSKRKGNDGNYFECVICDLGGDLLCCDSCPRTYHTACLNPPL--KRIPNGKWICPK 104
Query: 289 C 289
C
Sbjct: 105 C 105
>7291946 [BK] KOG1473 Nucleosome remodeling factor subunit NURF301/BPTF
Length = 976
Score = 57.0 bits (136), Expect = 8e-08
Identities = 22/48 (45%), Positives = 28/48 (57%), Gaps = 2/48 (4%)
Query: 243 DDFCSNCHGPGVFLCCDTCPKSFHFACCNPPLDPSHLPEGDWSCDECR 290
DD C CH G LCC+TCP +H C +PP+ + +P DW C CR
Sbjct: 339 DDHCRVCHRLGDLLCCETCPAVYHLECVDPPM--NDVPTEDWQCGLCR 384
>Hs4758336 [BK] KOG1473 Nucleosome remodeling factor subunit NURF301/BPTF
Length = 810
Score = 55.8 bits (133), Expect = 2e-07
Identities = 21/47 (44%), Positives = 27/47 (56%), Gaps = 2/47 (4%)
Query: 243 DDFCSNCHGPGVFLCCDTCPKSFHFACCNPPLDPSHLPEGDWSCDEC 289
DD C CH G LCC+TC +H C PPL+ +PE +W C+ C
Sbjct: 251 DDHCRVCHKLGDLLCCETCSAVYHLECVKPPLE--EVPEDEWQCEVC 295
>Hs19923462 [R] KOG0383 Predicted helicase
Length = 634
Score = 55.1 bits (131), Expect = 3e-07
Identities = 26/70 (37%), Positives = 37/70 (52%), Gaps = 7/70 (10%)
Query: 221 GQNDKASHLHIPEIDPDNNKENDDFCSNCHGPGVFLCCDTCPKSFHFACCNPPLDPSHLP 280
G +A+ H P+ D ++DFCS C G L CDTC + +H C +PPL +P
Sbjct: 425 GTRKRANEEHWPKGDI-----HEDFCSVCRKSGQLLMCDTCSRVYHLDCLDPPL--KTIP 477
Query: 281 EGDWSCDECR 290
+G W C C+
Sbjct: 478 KGMWICPRCQ 487
>YJR119c [R] KOG1246 DNA-binding protein jumonji/RBP2/SMCY contains JmjC
domain
Length = 728
Score = 52.0 bits (123), Expect = 3e-06
Identities = 24/66 (36%), Positives = 37/66 (55%), Gaps = 11/66 (16%)
Query: 233 EIDPDNN------KENDDFCSNC---HGPGVFLCCDTCPKSFHFACCNPPLDPSHLPEGD 283
++ PD+N +++DD C C + P + CD+C K FH C +PPL+ +P GD
Sbjct: 219 DLGPDSNSGSDFEEDDDDACIVCRKTNDPKRTILCDSCDKPFHIYCLSPPLE--RVPSGD 276
Query: 284 WSCDEC 289
W C+ C
Sbjct: 277 WICNTC 282
>Hs19923586 [K] KOG1081 Transcription factor NSD1 and related SET domain proteins
Length = 2696
Score = 52.0 bits (123), Expect = 3e-06
Identities = 23/67 (34%), Positives = 34/67 (50%), Gaps = 13/67 (19%)
Query: 242 NDDFCSNCHGPGVFLCCDTCPKSFHFACCNPPLDPSHLPEGDWSCDECRFKQ-------- 293
N +C C G LCCD+CP +FH C N +PEG+W C++C+ +
Sbjct: 1706 NVSWCFVCSEGGSLLCCDSCPAAFHRECLN-----IDIPEGNWYCNDCKAGKKPHYREIV 1760
Query: 294 WIKSNKY 300
W+K +Y
Sbjct: 1761 WVKVGRY 1767
>Hs17986256 [O] KOG2177 Predicted E3 ubiquitin ligase
Length = 689
Score = 51.2 bits (121), Expect = 5e-06
Identities = 26/81 (32%), Positives = 41/81 (50%), Gaps = 6/81 (7%)
Query: 213 KDKDTKLFGQNDKASHLHIPEIDPDNNKENDDFCSNCHGPGVFLCCDTCPKSFHFACCNP 272
K ++ K + +N + + + E+ ++N D C C G LCC TCP+ FH C P
Sbjct: 507 KGRNAKNWKRNIRCEGMTLGEL---LKRKNSDECEVCCQGGQLLCCGTCPRVFHEDCHIP 563
Query: 273 PLDPSHLPEGDWSCDECRFKQ 293
P++ + WSC CR K+
Sbjct: 564 PVEAKRML---WSCTFCRMKR 581
>Hs17986254 [O] KOG2177 Predicted E3 ubiquitin ligase
Length = 713
Score = 51.2 bits (121), Expect = 5e-06
Identities = 26/81 (32%), Positives = 41/81 (50%), Gaps = 6/81 (7%)
Query: 213 KDKDTKLFGQNDKASHLHIPEIDPDNNKENDDFCSNCHGPGVFLCCDTCPKSFHFACCNP 272
K ++ K + +N + + + E+ ++N D C C G LCC TCP+ FH C P
Sbjct: 507 KGRNAKNWKRNIRCEGMTLGEL---LKRKNSDECEVCCQGGQLLCCGTCPRVFHEDCHIP 563
Query: 273 PLDPSHLPEGDWSCDECRFKQ 293
P++ + WSC CR K+
Sbjct: 564 PVEAKRML---WSCTFCRMKR 581
>Hs6912512 [B] KOG2747 Histone acetyltransferase (MYST family)
Length = 2073
Score = 50.8 bits (120), Expect = 6e-06
Identities = 27/71 (38%), Positives = 36/71 (50%), Gaps = 8/71 (11%)
Query: 246 CSNCHGPGV----FLCCDTCPKSFHFACCNPPLDPSHLPEGDWSCDECRFKQWIKSNKYG 301
CS C G L CD+C + FH CC+PPL S +P+G W C CR K+ K K
Sbjct: 272 CSACRVQGRNADNMLFCDSCDRGFHMECCDPPL--SRMPKGMWICQVCRPKK--KGRKLL 327
Query: 302 LSSEKKLKTRF 312
++K R+
Sbjct: 328 HEKAAQIKRRY 338
>Hs5803098 [B] KOG2747 Histone acetyltransferase (MYST family)
Length = 2004
Score = 50.8 bits (120), Expect = 6e-06
Identities = 25/71 (35%), Positives = 37/71 (51%), Gaps = 8/71 (11%)
Query: 246 CSNCHGPGV----FLCCDTCPKSFHFACCNPPLDPSHLPEGDWSCDECRFKQWIKSNKYG 301
CS+C G L CD+C + FH CC+PPL + +P+G W C CR ++ K K
Sbjct: 265 CSSCRDQGKNADNMLFCDSCDRGFHMECCDPPL--TRMPKGMWICQICRPRK--KGRKLL 320
Query: 302 LSSEKKLKTRF 312
++K R+
Sbjct: 321 QKKAAQIKRRY 331
>At5g22760 [BK] KOG1473 Nucleosome remodeling factor subunit NURF301/BPTF
Length = 1516
Score = 50.8 bits (120), Expect = 6e-06
Identities = 22/62 (35%), Positives = 30/62 (47%), Gaps = 2/62 (3%)
Query: 232 PEIDPDNNKENDDFCSNCHGPGVFLCCDTCPKSFHFACCNPPLDPSHLPEGDWSCDECRF 291
P D + N D C C G LCCD CP ++H C + ++P+G W C EC
Sbjct: 402 PNGDSPDLDANSDECRLCGMDGTLLCCDGCPLAYHSRCIG--VVKMYIPDGPWYCPECTI 459
Query: 292 KQ 293
K+
Sbjct: 460 KK 461
Database: KOG eukaryal database 04/03
Posted date: Apr 14, 2003 1:07 PM
Number of letters in database: 30,389,216
Number of sequences in database: 60,738
Lambda K H
0.316 0.133 0.402
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 37,136,791
Number of Sequences: 60738
Number of extensions: 1664171
Number of successful extensions: 5254
Number of sequences better than 1.0e-05: 30
Number of HSP's better than 0.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 23
Number of HSP's that attempted gapping in prelim test: 5153
Number of HSP's gapped (non-prelim): 81
length of query: 623
length of database: 30,389,216
effective HSP length: 112
effective length of query: 511
effective length of database: 23,586,560
effective search space: 12052732160
effective search space used: 12052732160
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)