ORF      STATUS       Function Best COG  Functional category                                          Pathways and functional systems
r_klactVI6922   suspect: LH   R     KOG1940  General function prediction only                               Zn-finger protein

BLASTP 2.2.3 [May-13-2002]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= r_klactVI6922 2410900  2411241 114  
         (114 letters)

Database: KOG eukaryal database 04/03 
           60,738 sequences; 30,389,216 total letters

Searching..................................................done

Color Key for Alignment Scores:   


                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

YKL084w [R] KOG1940 Zn-finger protein                                 148   1e-36
SPAC29B12.12 [R] KOG1940 Zn-finger protein                             98   2e-21

>YKL084w [R] KOG1940 Zn-finger protein
          Length = 116

 Score =  148 bits (374), Expect = 1e-36
 Identities = 67/108 (62%), Positives = 81/108 (74%), Gaps = 4/108 (3%)

Query: 1   MEKAQIYGKLVDKESRCEHWHGPLDVIALRFKCCNGYYACYECHQELVPHVTERYN-IND 59
           M +  IYGK VD +SRC HWH P DVIA+RFKCC+ YYAC+ECHQEL  H  E+Y+ ++D
Sbjct: 1   MIETAIYGKTVDDQSRCVHWHLPKDVIAIRFKCCDKYYACFECHQELSSHPLEKYDLLDD 60

Query: 60  ETVPLVICGVCKLEMSFAAYSD---SLQCPNCRSQFNPGCKLHYDMYF 104
               L+ICGVC+ EM+FA Y D   +L CPNCRS FNPGCKLHY +YF
Sbjct: 61  ANKHLIICGVCRHEMTFAEYYDYNSNLICPNCRSPFNPGCKLHYHLYF 108


>SPAC29B12.12 [R] KOG1940 Zn-finger protein
          Length = 113

 Score = 98.2 bits (243), Expect = 2e-21
 Identities = 43/99 (43%), Positives = 56/99 (56%)

Query: 6   IYGKLVDKESRCEHWHGPLDVIALRFKCCNGYYACYECHQELVPHVTERYNINDETVPLV 65
           +YGKLVD E+RC H+H   DV+ALR   C  +YAC++CH EL  H    +      +P V
Sbjct: 12  VYGKLVDNETRCFHYHSKADVVALRCGQCEKFYACFQCHDELNTHPFLPWRKAKFHIPCV 71

Query: 66  ICGVCKLEMSFAAYSDSLQCPNCRSQFNPGCKLHYDMYF 104
           ICG CK  ++   Y  ++ C  C   FNP CK H   YF
Sbjct: 72  ICGACKNSLTVEEYRSTVHCKYCNHPFNPKCKNHAGYYF 110


  Database: KOG eukaryal database 04/03
    Posted date:  Apr 14, 2003  1:07 PM
  Number of letters in database: 30,389,216
  Number of sequences in database:  60,738
  
Lambda     K      H
   0.324    0.140    0.473 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,912,719
Number of Sequences: 60738
Number of extensions: 315711
Number of successful extensions: 994
Number of sequences better than 1.0e-05: 2
Number of HSP's better than  0.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 989
Number of HSP's gapped (non-prelim): 2
length of query: 114
length of database: 30,389,216
effective HSP length: 90
effective length of query: 24
effective length of database: 24,922,796
effective search space: 598147104
effective search space used: 598147104
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.5 bits)