ORF      STATUS       Function Best COG  Functional category                                          Pathways and functional systems
r_klactVI6939   suspect: LH   S     KOG2885  Function unknown                                               Uncharacterized conserved protein

BLASTP 2.2.3 [May-13-2002]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= r_klactVI6939 2417608 2416268 -447 
         (447 letters)

Database: KOG eukaryal database 04/03 
           60,738 sequences; 30,389,216 total letters

Searching..................................................done

Color Key for Alignment Scores:   


                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

YKL082c [S] KOG2885 Uncharacterized conserved protein                 339   4e-93
SPBC947.07 [S] KOG2885 Uncharacterized conserved protein               80   5e-15

>YKL082c [S] KOG2885 Uncharacterized conserved protein
          Length = 434

 Score =  339 bits (870), Expect = 4e-93
 Identities = 210/463 (45%), Positives = 263/463 (56%), Gaps = 49/463 (10%)

Query: 1   MSNSLEERLKSNSSAFEGLLSLIPAKYYYDDKTQEQWNAKKKSKGQLKEDKKSKLDPEQQ 60
           MSNSLEERL++NSSAF+GLL+LIPAKYYYD+K+QEQW AKKK+K Q K DK  KLDPEQ+
Sbjct: 1   MSNSLEERLRANSSAFDGLLALIPAKYYYDEKSQEQWKAKKKTKEQSKNDKLKKLDPEQR 60

Query: 61  DDESSSALEVMXXXXXXXXXVVLPGQK----KIQRELLDAXXXXXXXXXXXXXXXXXXXX 116
           DDE+SS LEVM         VVLPG+K    K+Q++                        
Sbjct: 61  DDETSSTLEVMKKKEKDAKPVVLPGEKFKHMKMQKQ---------------------KEA 99

Query: 117 XXXXXXXXXXVPEINISQTLG------ESESIAVIFDDDGNPVDXXXXXXXXXXXXXXXX 170
                       E+N    +       E E I VIFDD+GN +                 
Sbjct: 100 TSKVEGDSDLNVEVNDPMIIAPDEDEEEEEDIKVIFDDEGNEIPLESKKDTTEPDR---- 155

Query: 171 AIER---TKDDSSQKKKKMEELRCKLQEKIKALKEKRKAPGTKVEGAPSSREAILAQRKR 227
           ++E+   T+++  Q+KK +E LR KLQ KI  +K KRKAPG        SREAILAQRKR
Sbjct: 156 SVEKKSITEEEKLQRKKNLEALRSKLQAKISDMKSKRKAPG--------SREAILAQRKR 207

Query: 228 RQEARATK-LDSEKAGXXXXXXXXXXXXXXXXXXXHVSKKHRRNG--DEEISAKDVMFQS 284
           ++E +  K L+SE+                     + SKK  + G  D EI+A  VMFQ+
Sbjct: 208 KEELKKRKRLESEQEQDQDEIASDSDMEDIDSDLENNSKKRFKKGKKDSEINADGVMFQN 267

Query: 285 IQFNDGTKATSDLSHVRKGERKKGPAKKDVKAHLRLLETKKQSLESRDELDQIKLKEKEK 344
           I F+DG +ATSDL  +RK  R KGPAK DVK+HL+LLE KK  +E++DEL+QIK KEKEK
Sbjct: 268 IIFDDGARATSDLQRLRKAGRTKGPAKNDVKSHLKLLEAKKNKMEAKDELEQIKQKEKEK 327

Query: 345 WQKAMLQAEGIXXXXXXXXXXXXXXXXXXXXXXSTVEWRERKQVVENTVAERQKRREENL 404
           WQKAMLQAEGI                      S +EW ERK+VVE+T++ERQKRREENL
Sbjct: 328 WQKAMLQAEGIKIRDDEKLLRKAIKRKEAQKRKSAIEWSERKRVVEDTISERQKRREENL 387

Query: 405 QIRXXXXXXXXXXXXXXXXXXXGTAHLKKRAGFEGRMKSVKKK 447
           +IR                   G+A  KKRAGFEGR+K+ KKK
Sbjct: 388 RIRKDNKGKKRNKQEKMKRKYVGSAVPKKRAGFEGRLKTGKKK 430


>SPBC947.07 [S] KOG2885 Uncharacterized conserved protein
          Length = 233

 Score = 80.5 bits (197), Expect = 5e-15
 Identities = 61/220 (27%), Positives = 99/220 (44%), Gaps = 16/220 (7%)

Query: 188 ELRCKLQEKIKALKEKRKAPGTKVEGAPSSREAILAQRKRRQEARATKLDSEKAGXXXXX 247
           +LR KL EKI+  + +RKA   KV+     R  +L +RK + +ARA      K       
Sbjct: 9   DLRAKLAEKIQTFRSQRKAT-EKVD-----RALLLQRRKEKAKARAEAKKLAKKESKAKQ 62

Query: 248 XXXXXXXXXXXXXXHVSKKHRRNGDEEISAKDVMFQSIQFNDGTKATSDLSHVRKGERKK 307
                         +++ +   N    I+   ++    +F++G         ++   +K+
Sbjct: 63  ESKVAAYDTGNSSDNIADEENDNHKSTITYGTLIVGDDKFSNGK--------LKVAGKKR 114

Query: 308 GPAKKDVKAHLRLLETKKQSLESRDELDQIKLKEKEKWQKAMLQAEGIXXXXXXXXXXXX 367
           GP   DV   L+ LE KK+ +ES DE  + K++E +KW + +LQAEG             
Sbjct: 115 GPT--DVFGALKHLEAKKRRIESMDEEKRRKIEESDKWHRVLLQAEGKKLKDNEQLLKKS 172

Query: 368 XXXXXXXXXXSTVEWRERKQVVENTVAERQKRREENLQIR 407
                     S+  W+ERK   +  +  RQ+RREENL+ R
Sbjct: 173 IRRKEKEKKKSSDAWKERKDNEKKAMLMRQQRREENLKKR 212


  Database: KOG eukaryal database 04/03
    Posted date:  Apr 14, 2003  1:07 PM
  Number of letters in database: 30,389,216
  Number of sequences in database:  60,738
  
Lambda     K      H
   0.307    0.125    0.327 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 19,148,295
Number of Sequences: 60738
Number of extensions: 657166
Number of successful extensions: 4400
Number of sequences better than 1.0e-05: 2
Number of HSP's better than  0.0 without gapping: 1
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 4388
Number of HSP's gapped (non-prelim): 5
length of query: 447
length of database: 30,389,216
effective HSP length: 110
effective length of query: 337
effective length of database: 23,708,036
effective search space: 7989608132
effective search space used: 7989608132
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.6 bits)