ORF STATUS Function Best COG Functional category Pathways and functional systems
r_klactVI6952 good C KOG2909 Energy production and conversion Vacuolar H+-ATPase V1 sector, subunit C
Only best alignment is shown:
BLASTP 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= r_klactVI6952 2420635 2421807 391
(391 letters)
Database: KOG eukaryal database 04/03
60,738 sequences; 30,389,216 total letters
Searching..................................................done
Color Key for Alignment Scores: 
Score E
Sequences producing significant alignments: (bits) Value
YKL080w [C] KOG2909 Vacuolar H+-ATPase V1 sector subunit C 545 e-155
SPAPB2B4.05 [C] KOG2909 Vacuolar H+-ATPase V1 sector subunit C 242 8e-64
Hs4502315 [C] KOG2909 Vacuolar H+-ATPase V1 sector subunit C 233 5e-61
CE27612 [C] KOG2909 Vacuolar H+-ATPase V1 sector subunit C 229 5e-60
7302940 [C] KOG2909 Vacuolar H+-ATPase V1 sector subunit C 228 1e-59
Hs21389365 [C] KOG2909 Vacuolar H+-ATPase V1 sector subunit C 212 7e-55
7302941 [C] KOG2909 Vacuolar H+-ATPase V1 sector subunit C 201 2e-51
At1g12840 [C] KOG2909 Vacuolar H+-ATPase V1 sector subunit C 191 2e-48
ECU03g0500 [C] KOG2909 Vacuolar H+-ATPase V1 sector subunit C 72 1e-12
>YKL080w [C] KOG2909 Vacuolar H+-ATPase V1 sector subunit C
Length = 392
Score = 545 bits (1405), Expect = e-155
Identities = 270/392 (68%), Positives = 326/392 (82%), Gaps = 3/392 (0%)
Query: 1 MTTALYTAKDFILVSLPENAKPSQNPERDVSTWLETGLISGRSYVSDFPIPDFKIGSLDT 60
M TALYTA DFIL+SLP+NA+P P +W LI GR++VSDF IP+FKIGSLDT
Sbjct: 1 MATALYTANDFILISLPQNAQPVTAPGSKTDSWFNETLIGGRAFVSDFKIPEFKIGSLDT 60
Query: 61 LVLQSEELAKIDSQIYSSLQKIVEILNALTDTQASA---ISINKQSIPEFLTHFQWDSRK 117
L+++SEEL+K+D+QI +S+ KI+EIL L +T +A + IN +PE+L +FQW +RK
Sbjct: 61 LIVESEELSKVDNQIGASIGKIIEILQGLNETSTNAYRTLPINNMPVPEYLENFQWQTRK 120
Query: 118 FKLEKSVKELIHDLSIESFQLDADVRSTYSNYNNAKSNFAAAERKKTGDLSVRSLHDIVK 177
FKL+KS+K+LI +S ES QLDADVR+TY+NYN+AK+N AAAERKKTGDLSVRSLHDIVK
Sbjct: 121 FKLDKSIKDLITLISNESSQLDADVRATYANYNSAKTNLAAAERKKTGDLSVRSLHDIVK 180
Query: 178 AEDFILNSEYLTTVLVAVPKTLKQDFEKHYETLAEKVVPGSATVLKQDDEFILYNVHLFK 237
EDF+LNSE+LTTVLVAVPK+LK DFEK YETL++ VVP SA+V+ +D E++L+NVHLFK
Sbjct: 181 PEDFVLNSEHLTTVLVAVPKSLKSDFEKSYETLSKNVVPASASVIAEDAEYVLFNVHLFK 240
Query: 238 KFQHDFQNACRERKYIPRDFAYSEELIDQLKKEHDTAASQEQSLRVQLIRLAKTAFQDVF 297
K +F A RE+K+IPR+F YSEELIDQLKKEHD+AAS EQSLRVQL+RLAKTA+ DVF
Sbjct: 241 KNVQEFTTAAREKKFIPREFNYSEELIDQLKKEHDSAASLEQSLRVQLVRLAKTAYVDVF 300
Query: 298 VNWLHIKALRVYVESVLRYGLPPFFLTKIIAVPPKQLSACKSELIEQFSYLAGNAFSKDK 357
+NW HIKALRVYVESVLRYGLPP F KIIAVPPK LS CKSELI+ F +L GNAF KDK
Sbjct: 301 INWFHIKALRVYVESVLRYGLPPHFNIKIIAVPPKNLSKCKSELIDAFGFLGGNAFMKDK 360
Query: 358 RGKINRNDTSLHEYASLVDTEYEPFVLYSIQL 389
+GKIN+ DTSLH+YASLVDTEYEPFV+Y I L
Sbjct: 361 KGKINKQDTSLHQYASLVDTEYEPFVMYIINL 392
>SPAPB2B4.05 [C] KOG2909 Vacuolar H+-ATPase V1 sector subunit C
Length = 394
Score = 242 bits (617), Expect = 8e-64
Identities = 136/383 (35%), Positives = 218/383 (56%), Gaps = 5/383 (1%)
Query: 10 DFILVSLPENAKPSQNPERDVSTWLETGLISGRSYVSDFPIPDFKIGSLDTLVLQSEELA 69
DF ++S+P + + D+ L +G S S V+ F +P FK+ SLD L+ QSE+L
Sbjct: 5 DFWILSVPSRGGSNADLCDDIERLLVSGSTSLISTVAPFDVPPFKVESLDVLISQSEQLT 64
Query: 70 KIDSQIYSSLQKIVEILNALTDTQASAIS----INKQSIPEFLTHFQWDSRKFKLEKSVK 125
K D+Q S++ KI +I+ + + + + +S E+++ F W+S +F + K++
Sbjct: 65 KQDAQCASAISKISDIIKNTVSSSSGDLKDYFMVQDKSPLEYVSSFAWNSSRFHMNKTIS 124
Query: 126 ELIHDLSIESFQLDADVRSTYSNYNNAKSNFAAAERKKTGDLSVRSLHDIVKAEDFILNS 185
E+ ++ E + D+R+ +++ A S F ++K++G+LS +SL +IV ED + S
Sbjct: 125 EISDRITSEIISFENDIRTRQTSFQQASSAFQNMQKKQSGNLSQKSLANIVHEEDVVHGS 184
Query: 186 EYLTTVLVAVPKTLKQDFEKHYETLAEKVVPGSATVLKQDDEFILYNVHLFKKFQHDFQN 245
+YLT V +AVP L++ F YETL + V+P SA L QD EF+LY V +FKK F
Sbjct: 185 DYLTNVFIAVPLNLEKQFLNSYETLTDLVIPRSAKKLDQDSEFVLYTVVVFKKTADSFIT 244
Query: 246 ACRERKYIPRDFAYSEELIDQLKKEHDTAASQEQSLRVQLIRLAKTAFQDVFVNWLHIKA 305
RE KY R+F + + L + + E D AA +E+ + L+R A AF + F W+H+K
Sbjct: 245 KAREAKYTIREFTFEQGLRETEQSEFDDAAVKEKRMLSSLLRYASIAFSESFQGWIHLKC 304
Query: 306 LRVYVESVLRYGLPPFFLTKIIAVPPKQLSACKSELIEQFSYLAGNAFSKDKRGKINRND 365
L VYVES+LRYGLPP F + I K K+ L+ +++YLA N +K ++ +
Sbjct: 305 LCVYVESILRYGLPPDFSSVIFQPMAKSEVKIKNILLSKYAYLAQNPVGNNKVKNVDSSA 364
Query: 366 TSLHEYASL-VDTEYEPFVLYSI 387
A L +D EY PFVL+++
Sbjct: 365 GLDESMADLNLDEEYLPFVLFTV 387
>Hs4502315 [C] KOG2909 Vacuolar H+-ATPase V1 sector subunit C
Length = 382
Score = 233 bits (593), Expect = 5e-61
Identities = 143/387 (36%), Positives = 210/387 (53%), Gaps = 24/387 (6%)
Query: 10 DFILVSLPENAKPSQNPERDVSTWLETGLISGRSYVSDFPIPDFKIGSLDTLVLQSEELA 69
+F L+S P Q E+ T + + S F IPD K+G+LD LV S+ELA
Sbjct: 3 EFWLISAPGEKTCQQTWEK---LHAATSKNNNLAVTSKFNIPDLKVGTLDVLVGLSDELA 59
Query: 70 KIDSQIYSSLQKIVE----ILNALTDTQASAISINKQSIPEFLTHFQWDSRKFKLEKSVK 125
K+D+ + ++K+ + +L D + N + ++T FQWD K+ +++S+K
Sbjct: 60 KLDAFVEGVVKKVAQYMADVLEDSKDKVQENLLANGVDLVTYITRFQWDMAKYPIKQSLK 119
Query: 126 ELIHDLSIESFQLDADVRSTYSNYNNAKSNFAAAERKKTGDLSVRSLHDIVKAEDFILNS 185
+ ++ Q+D D++S S YNN K N ERK G L RSL +IVK +DF+L+S
Sbjct: 120 NISEIIAKGVTQIDNDLKSRASAYNNLKGNLQNLERKNAGSLLTRSLAEIVKKDDFVLDS 179
Query: 186 EYLTTVLVAVPKTLKQDFEKHYETLAEKVVPGSATVLKQDDEFILYNVHLFKKFQHDFQN 245
EYL T+LV VPK D+ K YETLAE VVP S+ VL +D + L NV LF+K DF++
Sbjct: 180 EYLVTLLVVVPKLNHNDWIKQYETLAEMVVPRSSNVLSEDQDSYLCNVTLFRKAVDDFRH 239
Query: 246 ACRERKYIPRDFAYSEELIDQLKKEHDTAASQEQSLRVQLIRLAKTAFQDVFVNWLHIKA 305
RE K+I RDF Y+EE + K+E + ++ ++ L+R K F + F+ W+H+KA
Sbjct: 240 KARENKFIVRDFQYNEEEMKADKEEMNRLSTDKKKQFGPLVRWLKVNFSEAFIAWIHVKA 299
Query: 306 LRVYVESVLRYGLPPFFLTKIIAVPPKQLSACKSELIEQFSYLAGNAFS-----KDKRGK 360
LRV+VESVLRYGLP F ++ K L + L E + +L +A + D G
Sbjct: 300 LRVFVESVLRYGLPVNFQAMLLQPNKKTLKKLREVLHELYKHLDSSAAAIIDAPMDIPG- 358
Query: 361 INRNDTSLHEYASLVDTEYEPFVLYSI 387
+L EY P+V Y I
Sbjct: 359 -----------LNLSQQEYYPYVYYKI 374
>CE27612 [C] KOG2909 Vacuolar H+-ATPase V1 sector subunit C
Length = 394
Score = 229 bits (584), Expect = 5e-60
Identities = 123/311 (39%), Positives = 189/311 (60%), Gaps = 4/311 (1%)
Query: 46 SDFPIPDFKIGSLDTLVLQSEELAKIDSQIYSSLQKIVEILNALTDTQASAIS----INK 101
S + IPD K+G+LD LV S++L+K+D+ + ++K+V+ + + S I+ I
Sbjct: 38 SKYLIPDLKVGTLDQLVGLSDDLSKLDTSAEAVIRKLVQYFTEVLEEDKSKIAENLVIGN 97
Query: 102 QSIPEFLTHFQWDSRKFKLEKSVKELIHDLSIESFQLDADVRSTYSNYNNAKSNFAAAER 161
+ + ++T FQW+ K+ L++S+K L + + Q+D D++ YNN K+ A+ +R
Sbjct: 98 KDMKTYVTKFQWEGAKYPLKQSLKVLSEIIGKQISQIDNDLKVKSLTYNNLKNALASMDR 157
Query: 162 KKTGDLSVRSLHDIVKAEDFILNSEYLTTVLVAVPKTLKQDFEKHYETLAEKVVPGSATV 221
K G L + L D+VKA+DF+LNSEYL TV+V VPK +++E+ Y TL+ VVPGS+ +
Sbjct: 158 KTVGSLLTKDLADLVKADDFVLNSEYLQTVIVVVPKISVKEWEQKYATLSSMVVPGSSKL 217
Query: 222 LKQDDEFILYNVHLFKKFQHDFQNACRERKYIPRDFAYSEELIDQLKKEHDTAASQEQSL 281
L ++ E LY V LFKK +F+N RE K+I RDF Y EE + + E D +++Q
Sbjct: 218 LTEEGEHALYTVTLFKKVIDEFKNTARENKFIVRDFVYDEETLKAGRTERDKLMAEKQRQ 277
Query: 282 RVQLIRLAKTAFQDVFVNWLHIKALRVYVESVLRYGLPPFFLTKIIAVPPKQLSACKSEL 341
LIR K F ++F ++HIKALRV+VESVLRYGLP F +I Q + EL
Sbjct: 278 YAPLIRWLKINFGEIFAAYIHIKALRVFVESVLRYGLPVNFQAAVIEPAKGQQKKLRQEL 337
Query: 342 IEQFSYLAGNA 352
+ + +L G+A
Sbjct: 338 HKLYIHLDGSA 348
>7302940 [C] KOG2909 Vacuolar H+-ATPase V1 sector subunit C
Length = 388
Score = 228 bits (581), Expect = 1e-59
Identities = 124/346 (35%), Positives = 197/346 (56%), Gaps = 8/346 (2%)
Query: 48 FPIPDFKIGSLDTLVLQSEELAKIDSQIYSSLQKIVEILNALTDTQASAIS----INKQS 103
F IPD K+G+LD LV S++L K+D+ + +K+ L + + Q + N
Sbjct: 39 FHIPDLKVGTLDQLVGLSDDLGKLDTYVEQITRKVANYLGEVLEDQRDKLHENLMANNTE 98
Query: 104 IPEFLTHFQWDSRKFKLEKSVKELIHDLSIESFQLDADVRSTYSNYNNAKSNFAAAERKK 163
+P++LT FQWD K+ +++S++ + +S + Q+D D+++ YNN K N E+KK
Sbjct: 99 LPQYLTRFQWDMAKYPIKQSLRNIADIISKQIGQIDGDLKTKSQAYNNLKGNLQNLEKKK 158
Query: 164 TGDLSVRSLHDIVKAEDFILNSEYLTTVLVAVPKTLKQDFEKHYETLAEKVVPGSATVLK 223
TG L R+L D+VK E FIL+SEYLTT+LV VPK + D+ +YE + + +VP S+ +++
Sbjct: 159 TGSLLTRNLADLVKKEHFILDSEYLTTLLVIVPKVMANDWLTNYEKITDMIVPRSSQLIQ 218
Query: 224 QDDEFILYNVHLFKKFQHDFQNACRERKYIPRDFAYSEELIDQLKKEHDTAASQEQSLRV 283
+D ++ L+NV LFKK +F+ RERK+I RDF Y+EE + K E + ++
Sbjct: 219 EDADYCLFNVTLFKKVAEEFKLHARERKFIVRDFVYNEEELAAGKNEMTKLMTDKKKQFG 278
Query: 284 QLIRLAKTAFQDVFVNWLHIKALRVYVESVLRYGLPPFFLTKIIAVPPKQLSACKSELIE 343
L+R K F + F +H+KALRV+VESVLRYGLP F +I K + + L +
Sbjct: 279 PLVRWLKVNFSEAFCALIHVKALRVFVESVLRYGLPVNFQAILIEPNKKSVKRLRDVLNQ 338
Query: 344 QFSYLAGNAFSKDKRGKINRNDTSLHEYASLVDTEYEPFVLYSIQL 389
+ +L G + G ++ D +EY P+V Y + +
Sbjct: 339 LYGHLDGASAG----GAVSSADNVDIPGLGFGQSEYFPYVFYKVNI 380
>Hs21389365 [C] KOG2909 Vacuolar H+-ATPase V1 sector subunit C
Length = 381
Score = 212 bits (540), Expect = 7e-55
Identities = 121/333 (36%), Positives = 195/333 (58%), Gaps = 10/333 (3%)
Query: 10 DFILVSLPENAKPSQNPERDVSTWLETGLISGRSYVSDFPIPDFKIGSLDTLVLQSEELA 69
+F L+S P + + Q ER + ++ L SY + F IPDFK+G+LD+LV S+EL
Sbjct: 3 EFWLISAPGDKENLQALERMNTVTSKSNL----SYNTKFAIPDFKVGTLDSLVGLSDELG 58
Query: 70 KID----SQIYSSLQKIVEILNALTDTQASAISINKQSIPEFLTHFQWDSRKFKLEKSVK 125
K+D S I Q +VE++ + N + F+THF+WD K+ +++ +
Sbjct: 59 KLDTFAESLIRRMAQSVVEVMEDSKGKVQEHLLANGVDLTSFVTHFEWDMAKYPVKQPLV 118
Query: 126 ELIHDLSIESFQLDADVRSTYSNYNNAKSNFAAAERKKTGDLSVRSLHDIVKAEDFILNS 185
++ ++ + Q++ D++S + Y+ K+N E+K G+L R+L DIV EDF+L+S
Sbjct: 119 SVVDTIAKQLAQIEMDLKSRTAAYDTLKTNLENLEKKSMGNLFTRTLSDIVSKEDFVLDS 178
Query: 186 EYLTTVLVAVPKTLKQDFEKHYETLAEKVVPGSATVLKQDDEFILYNVHLFKKFQHDFQN 245
EYL T+LV VPK ++K YE+L++ VVP S ++ +D E L+ V LF+K DF+
Sbjct: 179 EYLVTLLVIVPKPNYSQWQKTYESLSDMVVPRSTKLITEDKEGGLFTVTLFRKVIEDFKT 238
Query: 246 ACRERKYIPRDFAYSEELIDQLKKEHDTAASQEQSLRVQLIRLAKTAFQDVFVNWLHIKA 305
+E K+ R+F Y E+ I++ ++E S ++ L+R K F + F+ W+HIKA
Sbjct: 239 KAKENKFTVREFYYDEKEIEREREEMARLLSDKKQQYGPLLRWLKVNFSEAFIAWIHIKA 298
Query: 306 LRVYVESVLRYGLPPFFLTKIIAVPPKQLSACK 338
LRV+VESVLRYGLP F + + + P + S+ K
Sbjct: 299 LRVFVESVLRYGLPVNF--QAVLLQPHKKSSTK 329
>7302941 [C] KOG2909 Vacuolar H+-ATPase V1 sector subunit C
Length = 442
Score = 201 bits (510), Expect = 2e-51
Identities = 107/289 (37%), Positives = 168/289 (58%), Gaps = 4/289 (1%)
Query: 101 KQSIPEFLTHFQWDSRKFKLEKSVKELIHDLSIESFQLDADVRSTYSNYNNAKSNFAAAE 160
K +P++LT FQWD K+ +++S++ + +S + Q+D D+++ YNN K N E
Sbjct: 150 KAELPQYLTRFQWDMAKYPIKQSLRNIADIISKQIGQIDGDLKTKSQAYNNLKGNLQNLE 209
Query: 161 RKKTGDLSVRSLHDIVKAEDFILNSEYLTTVLVAVPKTLKQDFEKHYETLAEKVVPGSAT 220
+KKTG L R+L D+VK E FIL+SEYLTT+LV VPK + D+ +YE + + +VP S+
Sbjct: 210 KKKTGSLLTRNLADLVKKEHFILDSEYLTTLLVIVPKVMANDWLTNYEKITDMIVPRSSQ 269
Query: 221 VLKQDDEFILYNVHLFKKFQHDFQNACRERKYIPRDFAYSEELIDQLKKEHDTAASQEQS 280
++++D ++ L+NV LFKK +F+ RERK+I RDF Y+EE + K E + ++
Sbjct: 270 LIQEDADYCLFNVTLFKKVAEEFKLHARERKFIVRDFVYNEEELAAGKNEMTKLMTDKKK 329
Query: 281 LRVQLIRLAKTAFQDVFVNWLHIKALRVYVESVLRYGLPPFFLTKIIAVPPKQLSACKSE 340
L+R K F + F +H+KALRV+VESVLRYGLP F +I K + +
Sbjct: 330 QFGPLVRWLKVNFSEAFCALIHVKALRVFVESVLRYGLPVNFQAILIEPNKKSVKRLRDV 389
Query: 341 LIEQFSYLAGNAFSKDKRGKINRNDTSLHEYASLVDTEYEPFVLYSIQL 389
L + + +L G + G ++ D +EY P+V Y + +
Sbjct: 390 LNQLYGHLDGASAG----GAVSSADNVDIPGLGFGQSEYFPYVFYKVNI 434
>At1g12840 [C] KOG2909 Vacuolar H+-ATPase V1 sector subunit C
Length = 370
Score = 191 bits (485), Expect = 2e-48
Identities = 112/346 (32%), Positives = 196/346 (56%), Gaps = 19/346 (5%)
Query: 48 FPIPDFKIGSLDTLVLQSEELAKIDSQIYSSLQKI---VEILNALTDTQASAISINKQSI 104
F IP+ ++G+LD+L+ ++L K +S + QKI +E L ++ +++A++++ +
Sbjct: 39 FNIPNLRVGTLDSLLALGDDLLKSNSFVEGVSQKIRRQIEELERISGVESNALTVDGVPV 98
Query: 105 PEFLTHFQWDSRKFKLEKSVKELIHDLSIESFQLDADVRSTYSNYNNAKSNFAAAERKKT 164
+LT F WD K+ +KE++ ++ + +++ D++ + YNN + A RK++
Sbjct: 99 DSYLTRFVWDEAKYPTMSPLKEVVDNIQSQVAKIEDDLKVRVAEYNNIRGQLNAINRKQS 158
Query: 165 GDLSVRSLHDIVKAEDFILNSEYLTTVLVAVPKTLKQDFEKHYETLAEKVVPGSATVLKQ 224
G L+VR L ++VK ED I+ SE+L T+L VPK ++D+ YETL + VVP S+ L +
Sbjct: 159 GSLAVRDLSNLVKPED-IVESEHLVTLLAVVPKYSQKDWLACYETLTDYVVPRSSKKLFE 217
Query: 225 DDEFILYNVHLFKKFQHDFQNACRERKYIPRDFAYSEELIDQLKKEHDTAASQEQSLRVQ 284
D+E+ LY V LF + +F+ A RE+ + RDF S E + K+E ++SLR
Sbjct: 218 DNEYALYTVTLFTRVADNFRIAAREKGFQVRDFEQSVEAQETRKQELAKLVQDQESLRSS 277
Query: 285 LIRLAKTAFQDVFVNWLHIKALRVYVESVLRYGLPPFFLTKIIAVPPKQLSACKSELIEQ 344
L++ T++ +VF +W+H A+R + ES++RYGLPP FL +++ K +S L
Sbjct: 278 LLQWCYTSYGEVFSSWMHFCAVRTFAESIMRYGLPPAFLACVLSPAVKSEKKVRSIL--- 334
Query: 345 FSYLAGNAFSKDKRGKINRNDTSLHEYASLV-DTEYEPFVLYSIQL 389
L + S++ G + A L D+E P+V ++I L
Sbjct: 335 -ERLCDSTNSEEDAGAM----------AGLAGDSETHPYVSFTINL 369
>ECU03g0500 [C] KOG2909 Vacuolar H+-ATPase V1 sector subunit C
Length = 353
Score = 72.0 bits (175), Expect = 1e-12
Identities = 78/322 (24%), Positives = 138/322 (42%), Gaps = 27/322 (8%)
Query: 11 FILVSLPENAKPSQNPERDVSTWLETGLISGRSYVSDFPIPDFKIGSLDTLVLQSEELAK 70
FILV LP + E + W E GL S R +P F SL+ +V Q E L
Sbjct: 2 FILVGLPVEEDGLRPTEDQI--WDEYGLRSSRIL-----LPSFTGVSLEGIVNQVERLGS 54
Query: 71 IDSQIYSSLQKIVEILNALTDTQASAISINKQSIPEFLTHFQWDSRKFKLEKSVKELIHD 130
++ L+ + + + + I +FL +WD + F + S+++ I
Sbjct: 55 LEKSCEGLLKTFMGYCRE-NRVGKGIVYGSTEEIGDFL---EWDRQSF-VTNSIEKAILL 109
Query: 131 LSIESFQLDADVRSTYSNYNNAKSNFAAAERKKTGDLSVRSLHDIVKAEDFILNSEYLTT 190
L E ++ ++ AK +R G L L IV+ + E+L
Sbjct: 110 LDGEYRRISKAYEEKAEEFDGAKRECEKLQRLTRGSLCDIDLGIIVERPE---EYEFLRV 166
Query: 191 VLVAVPKTLKQDFEKHYETLAEKVVPGSATVLKQDDEFILYNVHLFKKFQHDFQNACRER 250
+ V V K +F + + + + + + D+E+ L+ V++ + D +N
Sbjct: 167 LYVVVQKARVPEFNRAVDE-SPHISLDAVEKVNSDEEYELFKVYVLHHGEEDVRNMIHAE 225
Query: 251 KYIPRDF----AYSEELIDQLKKEHDTAASQEQSLRVQLIRLAKTAFQDVFVNWLHIKAL 306
++ +D SEE+I + ++ + ++ E+ L + +VF +HIK L
Sbjct: 226 GFMVKDLDKNMVSSEEMIARRRRAEEKFSAMEKIL----MTFMHVHLTEVFRILIHIKLL 281
Query: 307 RVYVESVLRYGLPP---FFLTK 325
R++VESV RYGLP FF+T+
Sbjct: 282 RLFVESVYRYGLPTEYMFFVTR 303
Database: KOG eukaryal database 04/03
Posted date: Apr 14, 2003 1:07 PM
Number of letters in database: 30,389,216
Number of sequences in database: 60,738
Lambda K H
0.317 0.133 0.371
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 22,265,748
Number of Sequences: 60738
Number of extensions: 912110
Number of successful extensions: 2884
Number of sequences better than 1.0e-05: 9
Number of HSP's better than 0.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 2866
Number of HSP's gapped (non-prelim): 10
length of query: 391
length of database: 30,389,216
effective HSP length: 108
effective length of query: 283
effective length of database: 23,829,512
effective search space: 6743751896
effective search space used: 6743751896
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)