ORF STATUS Function Best COG Functional category Pathways and functional systems
r_klactVI6976 good A KOG0922 RNA processing and modification DEAH-box RNA helicase
Only best alignment is shown:
BLASTP 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= r_klactVI6976 2428360 2430555 732
(732 letters)
Database: KOG eukaryal database 04/03
60,738 sequences; 30,389,216 total letters
Searching..................................................done
Color Key for Alignment Scores: 
Score E
Sequences producing significant alignments: (bits) Value
YKL078w [A] KOG0922 DEAH-box RNA helicase 875 0.0
SPAC2G11.11c [A] KOG0922 DEAH-box RNA helicase 520 e-147
At3g26560 [A] KOG0922 DEAH-box RNA helicase 441 e-123
Hs4826690 [A] KOG0922 DEAH-box RNA helicase 439 e-123
SPAC10F6.02c [A] KOG0922 DEAH-box RNA helicase 438 e-122
YGL120c [A] KOG0925 mRNA splicing factor ATP-dependent RNA helicase 437 e-122
At4g16680 [A] KOG0923 mRNA splicing factor ATP-dependent RNA hel... 436 e-122
7303231 [A] KOG0922 DEAH-box RNA helicase 434 e-121
At1g32490 [A] KOG0923 mRNA splicing factor ATP-dependent RNA hel... 433 e-121
7298547 [A] KOG0923 mRNA splicing factor ATP-dependent RNA helicase 431 e-120
YER013w [A] KOG0922 DEAH-box RNA helicase 427 e-119
SPBC16H5.10c [A] KOG0925 mRNA splicing factor ATP-dependent RNA ... 427 e-119
At2g35340 [A] KOG0923 mRNA splicing factor ATP-dependent RNA hel... 425 e-118
At2g47250 [A] KOG0925 mRNA splicing factor ATP-dependent RNA hel... 423 e-118
CE01889 [A] KOG0922 DEAH-box RNA helicase 423 e-118
At3g62310 [A] KOG0925 mRNA splicing factor ATP-dependent RNA hel... 422 e-117
Hs20544129 [A] KOG0922 DEAH-box RNA helicase 421 e-117
CE15592 [A] KOG0923 mRNA splicing factor ATP-dependent RNA helicase 420 e-117
Hs20336302 [A] KOG0922 DEAH-box RNA helicase 419 e-117
Hs20555648 [A] KOG0923 mRNA splicing factor ATP-dependent RNA he... 414 e-115
Hs4503293 [A] KOG0923 mRNA splicing factor ATP-dependent RNA hel... 411 e-114
CE01334 [A] KOG0925 mRNA splicing factor ATP-dependent RNA helicase 409 e-114
YNR011c [A] KOG0923 mRNA splicing factor ATP-dependent RNA helicase 407 e-113
7304234 [A] KOG0925 mRNA splicing factor ATP-dependent RNA helicase 404 e-112
Hs4557517 [A] KOG0925 mRNA splicing factor ATP-dependent RNA hel... 399 e-111
YKR086w [A] KOG0924 mRNA splicing factor ATP-dependent RNA helicase 398 e-110
CE01027 [A] KOG0924 mRNA splicing factor ATP-dependent RNA helicase 398 e-110
At1g26370 [A] KOG0922 DEAH-box RNA helicase 391 e-108
Hs17999539 [A] KOG0924 mRNA splicing factor ATP-dependent RNA he... 388 e-107
7295673 [A] KOG0922 DEAH-box RNA helicase 383 e-106
At5g13010 [A] KOG0924 mRNA splicing factor ATP-dependent RNA hel... 379 e-104
Hs21362038 [A] KOG0922 DEAH-box RNA helicase 376 e-104
CE27311 [A] KOG0922 DEAH-box RNA helicase 373 e-103
At1g27900 [A] KOG0922 DEAH-box RNA helicase 365 e-100
SPBC1711.17 [A] KOG0924 mRNA splicing factor ATP-dependent RNA h... 352 9e-97
SPAC145.03 [A] KOG0922 DEAH-box RNA helicase 352 2e-96
7297620 [A] KOG0924 mRNA splicing factor ATP-dependent RNA helicase 325 2e-88
ECU11g0860 [A] KOG0922 DEAH-box RNA helicase 321 2e-87
ECU09g0150 [A] KOG0924 mRNA splicing factor ATP-dependent RNA he... 311 3e-84
SPAPB1A10.06c [AJ] KOG0926 DEAH-box RNA helicase 296 6e-80
SPBC19C2.01 [A] KOG0923 mRNA splicing factor ATP-dependent RNA h... 290 4e-78
At5g10370_1 [A] KOG0922 DEAH-box RNA helicase 283 9e-76
At4g01020_1 [A] KOG0922 DEAH-box RNA helicase 274 4e-73
Hs22066120 [A] KOG0922 DEAH-box RNA helicase 261 4e-69
7293584_2 [A] KOG0922 DEAH-box RNA helicase 261 4e-69
7292966 [A] KOG0924 mRNA splicing factor ATP-dependent RNA helicase 254 3e-67
CE27603 [A] KOG0922 DEAH-box RNA helicase 246 9e-65
7298709 [A] KOG0920 ATP-dependent RNA helicase A 246 9e-65
Hs20336300 [A] KOG0925 mRNA splicing factor ATP-dependent RNA he... 244 3e-64
SPCC895.09c [A] KOG0920 ATP-dependent RNA helicase A 241 2e-63
ECU10g0680 [A] KOG0923 mRNA splicing factor ATP-dependent RNA he... 241 2e-63
Hs18497286 [A] KOG0920 ATP-dependent RNA helicase A 241 3e-63
YLR419w [A] KOG0920 ATP-dependent RNA helicase A 238 3e-62
7293336 [A] KOG0920 ATP-dependent RNA helicase A 233 1e-60
Hs4503297 [K] KOG0921 Dosage compensation complex subunit MLE 228 3e-59
Hs22041930 [A] KOG0920 ATP-dependent RNA helicase A 224 3e-58
Hs20336294 [A] KOG0920 ATP-dependent RNA helicase A 224 3e-58
Hs20336290 [A] KOG0920 ATP-dependent RNA helicase A 224 3e-58
ECU04g0250 [A] KOG0922 DEAH-box RNA helicase 222 1e-57
7302201 [K] KOG0921 Dosage compensation complex subunit MLE 217 4e-56
SPBC15C4.05 [A] KOG0920 ATP-dependent RNA helicase A 209 2e-53
7300065 [A] KOG0920 ATP-dependent RNA helicase A 206 1e-52
Hs18559453 [A] KOG0920 ATP-dependent RNA helicase A 201 4e-51
YMR128w [AJ] KOG0926 DEAH-box RNA helicase 187 4e-47
7290296 [AJ] KOG0926 DEAH-box RNA helicase 167 4e-41
At2g47680 [A] KOG0920 ATP-dependent RNA helicase A 166 2e-40
7292573 [A] KOG0920 ATP-dependent RNA helicase A 162 1e-39
At2g01130 [A] KOG0920 ATP-dependent RNA helicase A 160 8e-39
At2g35920 [A] KOG0920 ATP-dependent RNA helicase A 159 1e-38
Hs7661934 [A] KOG0922 DEAH-box RNA helicase 157 4e-38
Hs21717812 [A] KOG0920 ATP-dependent RNA helicase A 156 9e-38
CE29563 [AJ] KOG0926 DEAH-box RNA helicase 156 9e-38
At4g18470_2 [A] KOG0922 DEAH-box RNA helicase 154 4e-37
At1g48650 [A] KOG0920 ATP-dependent RNA helicase A 153 1e-36
At1g58060 [A] KOG0920 ATP-dependent RNA helicase A 152 2e-36
CE18218 [K] KOG0921 Dosage compensation complex subunit MLE 151 3e-36
CE05718 [A] KOG0920 ATP-dependent RNA helicase A 148 3e-35
CE13245 [A] KOG0922 DEAH-box RNA helicase 148 3e-35
Hs19525735 [A] KOG0925 mRNA splicing factor ATP-dependent RNA he... 144 5e-34
At1g33390 [AJ] KOG0926 DEAH-box RNA helicase 142 2e-33
At1g06670 [A] KOG0920 ATP-dependent RNA helicase A 139 2e-32
7292962 [A] KOG0924 mRNA splicing factor ATP-dependent RNA helicase 137 4e-32
Hs20536957 [A] KOG0920 ATP-dependent RNA helicase A 135 3e-31
At2g30800 [A] KOG0920 ATP-dependent RNA helicase A 135 3e-31
At1g58050 [A] KOG0920 ATP-dependent RNA helicase A 130 7e-30
At5g14900 [A] KOG0925 mRNA splicing factor ATP-dependent RNA hel... 90 1e-17
HsM13375825 [A] KOG0922 DEAH-box RNA helicase 79 3e-14
Hs22052719 [K] KOG0921 Dosage compensation complex subunit MLE 75 5e-13
Hs22061649 [K] KOG0921 Dosage compensation complex subunit MLE 53 1e-06
>YKL078w [A] KOG0922 DEAH-box RNA helicase
Length = 735
Score = 875 bits (2262), Expect = 0.0
Identities = 449/696 (64%), Positives = 551/696 (78%), Gaps = 37/696 (5%)
Query: 56 DHVSN-----------KELKTRALRLLKGRESLPVFQNKEKIVSHIKANPVTILIGETGS 104
DHVS+ K LK+RA LLK RE+LPV+Q+K +I+S+I++NPVT+LIGETGS
Sbjct: 49 DHVSDQRSNKENVLTYKSLKSRASDLLKMRETLPVYQHKREIMSYIESNPVTVLIGETGS 108
Query: 105 GKSTQIPQFLMDEISPMHK-GAIAVTQPRRVAAINLATRVAQEHGCRIGHEVGYSVRFDN 163
GKSTQIPQF+++++ K G+IAVTQPRRVAAINLATRVAQEHGC++G +VGYSVRFDN
Sbjct: 109 GKSTQIPQFVLEKLYDTKKHGSIAVTQPRRVAAINLATRVAQEHGCKLGEQVGYSVRFDN 168
Query: 164 KSHKTRTKLKYLTDGMLIRELMLDKNLSNYKCIIIDEAHERTILTDLILGFLKELQLTKR 223
+ TRT+LKYLTDGML+RELM++ +L Y I+IDEAHERT+LTDLILGFLK L R
Sbjct: 169 TT-TTRTRLKYLTDGMLLRELMMNSDLREYSVIVIDEAHERTVLTDLILGFLKSLIQGPR 227
Query: 224 KDLKVIVMSATLQADLFSKFFSNAPILFVEGRKFKVDRYYLPRPCEDIVDSVVRCSVQLN 283
DL++IVMSATLQA+ FS+FF+NAPILFVEGRKF V +YYL P +DIVD+V+RC +Q+N
Sbjct: 228 PDLRIIVMSATLQAEKFSEFFNNAPILFVEGRKFDVKQYYLKAPTDDIVDAVIRCCIQIN 287
Query: 284 SSETTGDILCFLPGQEEIDKAVAILNKIIPYLDES--VPRITAYPLYAALPPKDQAKVFE 341
E GDILCFLPGQEEIDKAV I+ KI Y+ + VP I YPLYAALP Q+ VF
Sbjct: 288 QGEELGDILCFLPGQEEIDKAVTIMEKIAKYVSDEAPVPLIVPYPLYAALPAVQQSLVFA 347
Query: 342 PLKGFKRKIVLATNIAETSVTIPGVKYVIDCGLRKVKVWRHQLGLATLLTVPVSKASVAQ 401
P+KGFKRK+V +TNIAETSVTI GVK+V+D GLRKVKVWRHQLGLATLLTVP+S+AS Q
Sbjct: 348 PIKGFKRKVVFSTNIAETSVTISGVKFVVDSGLRKVKVWRHQLGLATLLTVPISQASAMQ 407
Query: 402 RAGRAGRESSGKCFRLFTEADYKQLPKQSESEITRCEITSPILMLKQYGVQDIVNWSWLE 461
R+GRAGRES GK FRL+ E+DY +LPKQSE EI R ++TSP+LMLK+YGV D++NW+W E
Sbjct: 408 RSGRAGRESEGKSFRLYCESDYVKLPKQSEPEIARSDVTSPVLMLKRYGVDDLLNWTWFE 467
Query: 462 HPGKEAIISGLKELYELGALNEQGRVTDRGRKMALLPLAPHLSNVLIHAQETQVLPYVID 521
+PGKEAI+ GL+ELYELGAL+ +G++T RG++MALLPL PHLS+VLI A E L VID
Sbjct: 468 NPGKEAIVMGLQELYELGALDTRGKITKRGQQMALLPLQPHLSSVLIKASEVGCLSQVID 527
Query: 522 IVSCLSVENLVLNPLPEERDEVNERRRALCTLGSKHGDLIMLKELFDMY-----QSLQSN 576
IVSCLSVENL+LNP PEERDEVNERR +LC G ++GDLIMLKELFD+Y +S ++
Sbjct: 528 IVSCLSVENLLLNPSPEERDEVNERRLSLCNAGKRYGDLIMLKELFDIYFYELGKSQDAS 587
Query: 577 SEKQEWCKQLCVSQRGFKNVIKVREQLTGYMKRLYNEPVEIKTKQDTLQPEEDIATNLLQ 636
SE+ +WCK LC+S RGFKNVI+VR+QL Y KRL++ E + + + ++
Sbjct: 588 SERNDWCKGLCISIRGFKNVIRVRDQLRVYCKRLFSSISEEDEESKKIGEDGEL------ 641
Query: 637 PPDIAGVLKCFLYGFVKNTAIGMPDKSFRTTPTGEPISIHPSSMLFMNSGDEIGPCPAIL 696
I+ +LKCFL GF+KNTAIGMPD+S+RT TGEPISIHPSSMLFMN CP I+
Sbjct: 642 ---ISKILKCFLTGFIKNTAIGMPDRSYRTVSTGEPISIHPSSMLFMNKS-----CPGIM 693
Query: 697 YIEHVFTTKGYARSVSRIELAWLQEI---ASGVLKQ 729
Y E+VFTTKGYAR+VSRIEL+WLQE+ A+ V KQ
Sbjct: 694 YTEYVFTTKGYARNVSRIELSWLQEVVTNAAAVAKQ 729
>SPAC2G11.11c [A] KOG0922 DEAH-box RNA helicase
Length = 719
Score = 520 bits (1338), Expect = e-147
Identities = 284/654 (43%), Positives = 421/654 (63%), Gaps = 32/654 (4%)
Query: 70 LLKGRESLPVFQNKEKIVSHIKANPVTILIGETGSGKSTQIPQFLMDEISPMHKGAIAVT 129
+L+ R++LP+++ + + I+ N V +++GETGSGKSTQIPQFL +E +G +A+T
Sbjct: 89 ILEQRKNLPIWEAHDTLCQQIQDNRVIVVVGETGSGKSTQIPQFL-NECPYAQEGCVAIT 147
Query: 130 QPRRVAAINLATRVAQEHGCRIGHEVGYSVRFDNKSHKTRTKLKYLTDGMLIRELMLDKN 189
QPRRVAA+NLA RVA E GCR+G +VGYS+RFD+ + K +T++KYLTDGML+REL+ D
Sbjct: 148 QPRRVAAVNLAKRVAAEQGCRLGEQVGYSIRFDDTTSK-KTRIKYLTDGMLLRELINDPI 206
Query: 190 LSNYKCIIIDEAHERTILTDLILGFLKELQLTKRKDLKVIVMSATLQADLFSKFFSNAPI 249
LS Y +I+DEAHERT++TD++LGF+K++ + KR L+VI+MSATL A+ FS+FF A I
Sbjct: 207 LSQYHTLILDEAHERTLMTDMLLGFVKKI-IKKRPALRVIIMSATLNAERFSEFFDGAEI 265
Query: 250 LFVEGRKFKVDRYYLPRPCEDIVDSVVRCSVQLNSSETTGDILCFLPGQEEIDKAVAILN 309
++ GR++ V +Y P D +D+ +R QL++ GDIL FL GQ+EI+ A++
Sbjct: 266 CYISGRQYPVQIHYTYTPEPDYLDACLRTIFQLHTKLPPGDILVFLTGQDEIEALEALIK 325
Query: 310 KIIPYLDESVPRITAYPLYAALPPKDQAKVFEPLKGFKRKIVLATNIAETSVTIPGVKYV 369
L ++P+I A PL+A+LP + Q +VF P RK+VL+TNIAETSVTI G++YV
Sbjct: 326 SYSKQLPSNLPQIQACPLFASLPQEQQLQVFLPALANHRKVVLSTNIAETSVTISGIRYV 385
Query: 370 IDCGLRKVKVWRHQLGLATLLTVPVSKASVAQRAGRAGRESSGKCFRLFTEADYKQLPKQ 429
ID GL K+K + +LGL +L P+S+++ QR+GRAGRE++G+C+R++TEAD+ +LPK+
Sbjct: 386 IDTGLAKIKQFNSKLGLESLTVQPISQSAAMQRSGRAGREAAGQCYRIYTEADFDKLPKE 445
Query: 430 SESEITRCEITSPILMLKQYGVQDIVNWSWLEHPGKEAIISGLKELYELGALNEQGRVTD 489
+ EI R +++ +L LK G D++N+ +++ P KE ++ L+ LY +GAL++ G + D
Sbjct: 446 TIPEIKRIDLSQAVLTLKARGQNDVINFHYMDPPSKEGLLRALEHLYSIGALDDNGHIND 505
Query: 490 RGRKMALLPLAPHLSNVLIHAQETQVLPYVIDIVSCLSVENLVLNPLPEERDEVNERRRA 549
G +M+L+PL P L+ ++ A+E L VID+VSCLS +++ L P E+RDE E R
Sbjct: 506 LGYQMSLIPLLPSLARAVLAAREHNCLSEVIDVVSCLSTDSMFLFP-QEKRDEAIEARLK 564
Query: 550 LCTLGSKHGDLIMLKELFDMYQSLQSNSEKQEWCKQLCVSQRGFKNVIKVREQLTGYMKR 609
GDL+ Y +S KQ WC Q +++R K ++ +R+QL +
Sbjct: 565 FL---HSEGDLLTCLNALRQYLESSHDSRKQ-WCSQNFINRRALKTILDIRKQLREHC-- 618
Query: 610 LYNEPVEIKTKQDTLQPEEDIATNLLQPPDIAGVLKCFLYGFVKNTAIGMPDKSFRTTPT 669
+K + E + NL L FL G++ NTA+ PD S+RT
Sbjct: 619 -------LKDGWELNSSPEVNSENL---------LLSFLSGYITNTALLHPDGSYRTIIG 662
Query: 670 GEPISIHPSSMLFMNSGDEIGPCPAILYIEHVFTTKGYARSVSRIELAWLQEIA 723
+ ISIHPSS LF G ++ AI+Y E VFTTK Y R VS I WL +A
Sbjct: 663 NQTISIHPSSSLF---GKKV---EAIMYHELVFTTKSYVRGVSSIRSNWLNAVA 710
>At3g26560 [A] KOG0922 DEAH-box RNA helicase
Length = 1168
Score = 441 bits (1133), Expect = e-123
Identities = 255/664 (38%), Positives = 396/664 (59%), Gaps = 36/664 (5%)
Query: 68 LRLLKGRESLPVFQNKEKIVSHIKANPVTILIGETGSGKSTQIPQFLMDEISPMHKGAIA 127
L + + RESLP+++ K++++ + N V ++IGETGSGK+TQ+ Q+L E KG I
Sbjct: 506 LSIQEQRESLPIYKLKKELIQAVHDNQVLVVIGETGSGKTTQVTQYLA-EAGYTTKGKIG 564
Query: 128 VTQPRRVAAINLATRVAQEHGCRIGHEVGYSVRFDNKSHKTRTKLKYLTDGMLIRELMLD 187
TQPRRVAA+++A RVA+E GCR+G EVGY++RF++ + T +KY+TDGML+RE+++D
Sbjct: 565 CTQPRRVAAMSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPD-TVIKYMTDGMLLREILID 623
Query: 188 KNLSNYKCIIIDEAHERTILTDLILGFLKELQLTKRKDLKVIVMSATLQADLFSKFFSNA 247
+NLS Y I++DEAHERTI TD++ G LK+L + +R DL++IV SATL A+ FS +F N
Sbjct: 624 ENLSQYSVIMLDEAHERTIHTDVLFGLLKKL-MKRRLDLRLIVTSATLDAEKFSGYFFNC 682
Query: 248 PILFVEGRKFKVDRYYLPRPCEDIVDSVVRCSVQLNSSETTGDILCFLPGQEEIDKAVAI 307
I + GR F V+ Y +P D +D+ + +Q++ +E GDIL FL GQEEID A
Sbjct: 683 NIFTIPGRTFPVEILYTKQPETDYLDAALITVLQIHLTEPEGDILVFLTGQEEIDSACQS 742
Query: 308 LNKIIPYLDESVPRITAYPLYAALPPKDQAKVFEPLKGFKRKIVLATNIAETSVTIPGVK 367
L + + L ++VP + P+Y+ALP + Q+++F+P KRK+V+ATNIAE S+TI G+
Sbjct: 743 LYERMKGLGKNVPELIILPVYSALPSEMQSRIFDPPPPGKRKVVVATNIAEASLTIDGIY 802
Query: 368 YVIDCGLRKVKVWRHQLGLATLLTVPVSKASVAQRAGRAGRESSGKCFRLFTEADYK-QL 426
YV+D G K V+ + GL +L+ P+S+AS QRAGRAGR GKC+RL+TE+ Y+ ++
Sbjct: 803 YVVDPGFAKQNVYNPKQGLESLVITPISQASAKQRAGRAGRTGPGKCYRLYTESAYRNEM 862
Query: 427 PKQSESEITRCEITSPILMLKQYGVQDIVNWSWLEHPGKEAIISGLKELYELGALNEQGR 486
P S EI R + L +K G+ D++++ +++ P +A+IS +++LY LGAL+E+G
Sbjct: 863 PPTSIPEIQRINLGMTTLTMKAMGINDLLSFDFMDPPQPQALISAMEQLYSLGALDEEGL 922
Query: 487 VTDRGRKMALLPLAPHLSNVLIHAQETQVLPYVIDIVSCLSVENLVLNPLPEERDEVNER 546
+T GRKMA PL P LS +L+ + + ++ +++ + N+ P E+ ++
Sbjct: 923 LTKLGRKMAEFPLEPPLSKMLLASVDLGCSDEILTMIAMIQTGNIFYR--PREKQAQADQ 980
Query: 547 RRALCTLGSKHGDLIMLKELFDMYQSLQSNSEKQEWCKQLCVSQRGFKNVIKVREQLTGY 606
+RA GD + L +Y++ ++ + WC + + R + VR+QL
Sbjct: 981 KRA--KFFQPEGDHL---TLLAVYEAWKAKNFSGPWCFENFIQSRSLRRAQDVRKQLLSI 1035
Query: 607 MKRLYNEPVEIKTKQDTLQPEEDIATNLLQPPDIAGVLKCFLYGFVKNTAIGMPDKSFRT 666
M K K D + ++ + K GF + A P + +RT
Sbjct: 1036 MD---------KYKLDVVTAGKNFTK----------IRKAITAGFFFHGARKDPQEGYRT 1076
Query: 667 TPTGEPISIHPSSMLFMNSGDEIGPCPAILYIEHVFTTKGYARSVSRIELAWLQEIASGV 726
+P+ IHPSS LF D ++Y + V TTK Y R V+ I+ WL E+A
Sbjct: 1077 LVENQPVYIHPSSALFQRQPD------WVIYHDLVMTTKEYMREVTVIDPKWLVELAPRF 1130
Query: 727 LKQS 730
K S
Sbjct: 1131 FKVS 1134
>Hs4826690 [A] KOG0922 DEAH-box RNA helicase
Length = 1220
Score = 439 bits (1129), Expect = e-123
Identities = 256/668 (38%), Positives = 395/668 (58%), Gaps = 36/668 (5%)
Query: 64 KTRALRLLKGRESLPVFQNKEKIVSHIKANPVTILIGETGSGKSTQIPQFLMDEISPMHK 123
K + +L+ RESLP+++ KE++V + N + I+IGETGSGK+TQI Q+L E +
Sbjct: 552 KKTQMSILEQRESLPIYKLKEQLVQAVHDNQILIVIGETGSGKTTQITQYLA-EAGYTSR 610
Query: 124 GAIAVTQPRRVAAINLATRVAQEHGCRIGHEVGYSVRFDNKSHKTRTKLKYLTDGMLIRE 183
G I TQPRRVAA+++A RV++E GC +G EVGY++RF++ + T +KY+TDGML+RE
Sbjct: 611 GKIGCTQPRRVAAMSVAKRVSEEFGCCLGQEVGYTIRFEDCT-SPETVIKYMTDGMLLRE 669
Query: 184 LMLDKNLSNYKCIIIDEAHERTILTDLILGFLKELQLTKRKDLKVIVMSATLQADLFSKF 243
++D +L+ Y I++DEAHERTI TD++ G LK+ + KR+D+K+IV SATL A FS++
Sbjct: 670 CLIDPDLTQYAIIMLDEAHERTIHTDVLFGLLKKT-VQKRQDMKLIVTSATLDAVKFSQY 728
Query: 244 FSNAPILFVEGRKFKVDRYYLPRPCEDIVDSVVRCSVQLNSSETTGDILCFLPGQEEIDK 303
F API + GR + V+ Y P D +D+ + +Q++ +E GDIL FL GQEEID
Sbjct: 729 FYEAPIFTIPGRTYPVEILYTKEPETDYLDASLITVMQIHLTEPPGDILVFLTGQEEIDT 788
Query: 304 AVAILNKIIPYLDESVPRITAYPLYAALPPKDQAKVFEPLKGFKRKIVLATNIAETSVTI 363
A IL + + L VP + P+Y+ALP + Q ++F+P RK+V+ATNIAETS+TI
Sbjct: 789 ACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFDPAPPGSRKVVIATNIAETSLTI 848
Query: 364 PGVKYVIDCGLRKVKVWRHQLGLATLLTVPVSKASVAQRAGRAGRESSGKCFRLFTEADY 423
G+ YV+D G K KV+ + G+ L+ P+S+A QRAGRAGR GKC+RL+TE Y
Sbjct: 849 DGIYYVVDPGFVKQKVYNSKTGIDQLVVTPISQAQAKQRAGRAGRTGPGKCYRLYTERAY 908
Query: 424 K-QLPKQSESEITRCEITSPILMLKQYGVQDIVNWSWLEHPGKEAIISGLKELYELGALN 482
+ ++ + EI R + S +L LK G+ D++++ +++ P E +I+ +++LY LGAL+
Sbjct: 909 RDEMLTTNVPEIQRTNLASTVLSLKAMGINDLLSFDFMDAPPMETLITAMEQLYTLGALD 968
Query: 483 EQGRVTDRGRKMALLPLAPHLSNVLIHAQETQVLPYVIDIVSCLSVENLVLNPLPEERDE 542
++G +T GR+MA PL P L +LI + ++ IVS LSV+N+ P+++
Sbjct: 969 DEGLLTRLGRRMAEFPLEPMLCKMLIMSVHLGCSEEMLTIVSMLSVQNVFYR--PKDKQA 1026
Query: 543 VNERRRALCTLGSKHGDLIMLKELFDMYQSLQSNSEKQEWCKQLCVSQRGFKNVIKVREQ 602
+ ++++A GD + L +Y S ++N WC + + R + +R+Q
Sbjct: 1027 LADQKKA--KFHQTEGDHL---TLLAVYNSWKNNKFSNPWCYENFIQARSLRRAQDIRKQ 1081
Query: 603 LTGYMKRLYNEPVEIKTKQDTLQPEEDIATNLLQPPDIAGVLKCFLYGFVKNTAIGMPDK 662
+ G M R ++ + + T++ V K GF +N A P +
Sbjct: 1082 MLGIMDR--HKLDVVSCGKSTVR-----------------VQKAICSGFFRNAAKKDPQE 1122
Query: 663 SFRTTPTGEPISIHPSSMLFMNSGDEIGPCPAILYIEHVFTTKGYARSVSRIELAWLQEI 722
+RT + + IHPSS LF + ++Y E V TTK Y R V+ I+ WL E
Sbjct: 1123 GYRTLIDQQVVYIHPSSALFNRQPE------WVVYHELVLTTKEYMREVTTIDPRWLVEF 1176
Query: 723 ASGVLKQS 730
A K S
Sbjct: 1177 APAFFKVS 1184
>SPAC10F6.02c [A] KOG0922 DEAH-box RNA helicase
Length = 1168
Score = 438 bits (1127), Expect = e-122
Identities = 253/667 (37%), Positives = 387/667 (57%), Gaps = 36/667 (5%)
Query: 64 KTRALRLLKGRESLPVFQNKEKIVSHIKANPVTILIGETGSGKSTQIPQFLMDEISPMHK 123
K L + + RE LPVF+ +++ + + N + +L+GETGSGK+TQI Q+L +E
Sbjct: 497 KRTTLSMKEQREGLPVFKLRKQFLEAVSKNQILVLLGETGSGKTTQITQYLAEEGYTSDS 556
Query: 124 GAIAVTQPRRVAAINLATRVAQEHGCRIGHEVGYSVRFDNKSHKTRTKLKYLTDGMLIRE 183
I TQPRRVAA+++A RVA+E GCR+G EVGY++RF++K+ + T++KY+TDGML RE
Sbjct: 557 KMIGCTQPRRVAAMSVAKRVAEEVGCRVGEEVGYTIRFEDKTSRM-TQIKYMTDGMLQRE 615
Query: 184 LMLDKNLSNYKCIIIDEAHERTILTDLILGFLKELQLTKRKDLKVIVMSATLQADLFSKF 243
++D LS Y II+DEAHERT+ TD++ G LK L KR DLK+IV SATL A+ FS +
Sbjct: 616 CLVDPLLSKYSVIILDEAHERTVATDVLFGLLKGTVL-KRPDLKLIVTSATLDAERFSSY 674
Query: 244 FSNAPILFVEGRKFKVDRYYLPRPCEDIVDSVVRCSVQLNSSETTGDILCFLPGQEEIDK 303
F PI + GR + V+ Y +P D +D+ + +Q++ SE GDIL FL GQEEID
Sbjct: 675 FYKCPIFTIPGRSYPVEIMYTKQPEADYLDAALMTVMQIHLSEGPGDILVFLTGQEEIDT 734
Query: 304 AVAILNKIIPYLDESVPRITAYPLYAALPPKDQAKVFEPLKGFKRKIVLATNIAETSVTI 363
+ IL + L +S+P + P+Y+ALP + Q+++FEP RK+V+ATNIAETS+TI
Sbjct: 735 SCEILYERSKMLGDSIPELVILPVYSALPSEIQSRIFEPAPPGGRKVVIATNIAETSLTI 794
Query: 364 PGVKYVIDCGLRKVKVWRHQLGLATLLTVPVSKASVAQRAGRAGRESSGKCFRLFTEADY 423
G+ YV+D G K + +LG+ +L+ P+S+A QR+GRAGR GKC+RL+TE+ Y
Sbjct: 795 DGIYYVVDPGFVKQSCFDPKLGMDSLIVTPISQAQARQRSGRAGRTGPGKCYRLYTESAY 854
Query: 424 K-QLPKQSESEITRCEITSPILMLKQYGVQDIVNWSWLEHPGKEAIISGLKELYELGALN 482
+ ++ EI R ++ ILMLK G+ D++N+ +++ P + +I+ L+ LY L AL+
Sbjct: 855 RNEMLPSPIPEIQRQNLSHTILMLKAMGINDLLNFDFMDPPPAQTMIAALQNLYALSALD 914
Query: 483 EQGRVTDRGRKMALLPLAPHLSNVLIHAQETQVLPYVIDIVSCLSVENLVLNPLPEERDE 542
++G +T GRKMA P+ P LS VLI + E ++ I++ LSV N+ P E++ E
Sbjct: 915 DEGLLTPLGRKMADFPMEPQLSKVLITSVELGCSEEMLSIIAMLSVPNIWSRP-REKQQE 973
Query: 543 VNERRRALCTLGSKHGDLIMLKELFDMYQSLQSNSEKQEWCKQLCVSQRGFKNVIKVREQ 602
+ +R S H L ++Y + + N WC + + RG + VR+Q
Sbjct: 974 ADRQRAQFANPESDH------LTLLNVYTTWKMNRCSDNWCYEHYIQARGMRRAEDVRKQ 1027
Query: 603 LTGYMKRLYNEPVEIKTKQDTLQPEEDIATNLLQPPDIAGVLKCFLYGFVKNTA-IGMPD 661
L M R + V K++ +L+ G+ N A +
Sbjct: 1028 LIRLMDRYRHPVVSCGRKREL-------------------ILRALCSGYFTNVAKRDSHE 1068
Query: 662 KSFRTTPTGEPISIHPSSMLFMNSGDEIGPCPAILYIEHVFTTKGYARSVSRIELAWLQE 721
++T P+ +HPS +LF + + ++Y E + T+K Y +VS + WL E
Sbjct: 1069 GCYKTIVENAPVYMHPSGVLFGKAAE------WVIYHELIQTSKEYMHTVSTVNPKWLVE 1122
Query: 722 IASGVLK 728
+A K
Sbjct: 1123 VAPTFFK 1129
>YGL120c [A] KOG0925 mRNA splicing factor ATP-dependent RNA helicase
Length = 767
Score = 437 bits (1124), Expect = e-122
Identities = 259/676 (38%), Positives = 401/676 (59%), Gaps = 39/676 (5%)
Query: 59 SNKELKTRALRLLKGRESLPVFQNKEKIVSHIKANPVTILIGETGSGKSTQIPQF-LMDE 117
+ +E + + +LK R LPV +++ + + N + + +GETGSGK+TQIPQF L DE
Sbjct: 75 TGREFTPKYVDILKIRRELPVHAQRDEFLKLYQNNQIMVFVGETGSGKTTQIPQFVLFDE 134
Query: 118 ISPMHKGAIAVTQPRRVAAINLATRVAQEHGCRIGHEVGYSVRFDNKSHKTRTKLKYLTD 177
+ + +A TQPRRVAA+++A RVA+E ++G EVGYS+RF+NK+ +T LKY+TD
Sbjct: 135 MPHLENTQVACTQPRRVAAMSVAQRVAEEMDVKLGEEVGYSIRFENKT-SNKTILKYMTD 193
Query: 178 GMLIRELMLDKNLSNYKCIIIDEAHERTILTDLILGFLKELQLTKRKDLKVIVMSATLQA 237
GML+RE M D +LS Y CII+DEAHERT+ TD+++G LK++ + +R DLK+I+MSATL A
Sbjct: 194 GMLLREAMEDHDLSRYSCIILDEAHERTLATDILMGLLKQV-VKRRPDLKIIIMSATLDA 252
Query: 238 DLFSKFFSNAPILFVEGRKFKVDRYYLPRPCEDIVDSVVRCSVQLNSSETTGDILCFLPG 297
+ F ++F++AP+L V GR + V+ YY P D +DS +R +Q++++E GDIL FL G
Sbjct: 253 EKFQRYFNDAPLLAVPGRTYPVELYYTPEFQRDYLDSAIRTVLQIHATEEAGDILLFLTG 312
Query: 298 QEEIDKAVAILNKIIPYL--DESVPRITAYPLYAALPPKDQAKVFEPLKGFK-----RKI 350
++EI+ AV ++ L +E ++ YPLY +LPP Q ++FEP RK+
Sbjct: 313 EDEIEDAVRKISLEGDQLVREEGCGPLSVYPLYGSLPPHQQQRIFEPAPESHNGRPGRKV 372
Query: 351 VLATNIAETSVTIPGVKYVIDCGLRKVKVWRHQLGLATLLTVPVSKASVAQRAGRAGRES 410
V++TNIAETS+TI G+ YV+D G K KV+ ++ + +LL P+SKAS QRAGRAGR
Sbjct: 373 VISTNIAETSLTIDGIVYVVDPGFSKQKVYNPRIRVESLLVSPISKASAQQRAGRAGRTR 432
Query: 411 SGKCFRLFT-EADYKQLPKQSESEITRCEITSPILMLKQYGVQDIVNWSWLEHPGKEAII 469
GKCFRL+T EA K+L +QS EI R ++S +L LK+ G+ D+V++ +++ P E ++
Sbjct: 433 PGKCFRLYTEEAFQKELIEQSYPEILRSNLSSTVLELKKLGIDDLVHFDFMDPPAPETMM 492
Query: 470 SGLKELYELGALNEQGRVTDRGRKMALLPLAPHLSNVLIHAQETQVLPYVIDIVSCLSVE 529
L+EL L L+++G +T GR + PL P L+ +LI + E Q ++ IV+ LSV
Sbjct: 493 RALEELNYLACLDDEGNLTPLGRLASQFPLDPMLAVMLIGSFEFQCSQEILTIVAMLSVP 552
Query: 530 NLVLNPLPEERDEVNERRRALCTLGSKHGDLIMLKELFDMYQSLQSNSEK-QEWCKQLCV 588
N+ + P +++ + + GD I L ++ ++S ++ +WC+ +
Sbjct: 553 NVFIRPTKDKKRADDAKN----IFAHPDGDHITLLNVYHAFKSDEAYEYGIHKWCRDHYL 608
Query: 589 SQRGFKNVIKVREQLTGYMKRLYNEPVEIKTKQDTLQPEEDIATNLLQPPDIAGVLKCFL 648
+ R +R QL M R YN +E+ T T+ P + K
Sbjct: 609 NYRSLSAADNIRSQLERLMNR-YN--LELNT------------TDYESPKYFDNIRKALA 653
Query: 649 YGFVKNTAIGMPD-KSFRTTPTGEPISIHPSSMLFMNSGDEIGPCPAILYIEHVFTTKGY 707
GF A K + T + + IHPS++L ++ ++Y E V T+K Y
Sbjct: 654 SGFFMQVAKKRSGAKGYITVKDNQDVLIHPSTVLGHDA-------EWVIYNEFVLTSKNY 706
Query: 708 ARSVSRIELAWLQEIA 723
R+V+ + WL EIA
Sbjct: 707 IRTVTSVRPEWLIEIA 722
>At4g16680 [A] KOG0923 mRNA splicing factor ATP-dependent RNA helicase
Length = 883
Score = 436 bits (1121), Expect = e-122
Identities = 255/660 (38%), Positives = 389/660 (58%), Gaps = 33/660 (5%)
Query: 64 KTRALRLLKGRESLPVFQNKEKIVSHIKANPVTILIGETGSGKSTQIPQFLMDEISPMHK 123
KT A + +GRE LP+ +E+++ I+ N V +++GETGSGK+TQIPQ+L E +
Sbjct: 209 KTAAEKAREGREFLPIHGYREELLKLIEENQVLVIVGETGSGKTTQIPQYLQ-EAGYTKR 267
Query: 124 GAIAVTQPRRVAAINLATRVAQEHGCRIGHEVGYSVRFDNKSHKTRTKLKYLTDGMLIRE 183
G I TQPRRVAA+++A+RVAQE G ++GHEVGYS+RF++ + + +T +KY+TDGML+RE
Sbjct: 268 GKIGCTQPRRVAAMSVASRVAQEVGVKLGHEVGYSIRFEDCTSE-KTVIKYMTDGMLLRE 326
Query: 184 LMLDKNLSNYKCIIIDEAHERTILTDLILGFLKELQLTKRKDLKVIVMSATLQADLFSKF 243
L+++ L +Y IIIDEAHERT+ TD++ +K++ R DL++I+ SATL+A FS++
Sbjct: 327 LLIEPKLDSYSVIIIDEAHERTLSTDILFALVKDVAKV-RPDLRLIISSATLEAKKFSEY 385
Query: 244 FSNAPILFVEGRKFKVDRYYLPRPCEDIVDSVVRCSVQLNSSETTGDILCFLPGQEEIDK 303
F +A I + GR++ V++ + P D +++V+R VQ++ +E GDIL FL GQEEI+
Sbjct: 386 FDSARIYLIPGRRYPVEKLFRKCPEPDYLETVIRTVVQIHQTEAIGDILVFLTGQEEIET 445
Query: 304 AVAILNKIIPYLDESVPRITAYPLYAALPPKDQAKVFEPLKGFKRKIVLATNIAETSVTI 363
L + + L I P+Y+ LP QAKVFEP RK+VLATNIAETS+TI
Sbjct: 446 VETNLKRRMMDLGTKGSEIIICPIYSNLPTPLQAKVFEPAPKGTRKVVLATNIAETSLTI 505
Query: 364 PGVKYVIDCGLRKVKVWRHQLGLATLLTVPVSKASVAQRAGRAGRESSGKCFRLFTEADY 423
GVKYVID G K+ + + G+ +LL P+SKAS AQRAGR+GR GKCFRL+ +
Sbjct: 506 DGVKYVIDPGYCKINSYNPRTGMESLLVTPISKASAAQRAGRSGRTGPGKCFRLY---NI 562
Query: 424 KQLPKQSESEITRCEITSPILMLKQYGVQDIVNWSWLEHPGKEAIISGLKELYELGALNE 483
K L + EI R + S +L LK G+QD+ N+ +++ P + A++ L+ LY LGAL+E
Sbjct: 563 KDLEPTTIPEIQRANLASVVLTLKSLGIQDVFNFDFMDPPPENALLKALELLYALGALDE 622
Query: 484 QGRVTDRGRKMALLPLAPHLSNVLIHAQETQVLPYVIDIVSCLSVENLVLNPLPEERDEV 543
G +T G +M P+ P LS +++ +++ + +I I + LSV N V ++
Sbjct: 623 IGEITKVGERMVEFPVDPMLSKMIVGSEKYKCSKEIITIAAMLSVGNSVFYRPKNQQVFA 682
Query: 544 NERRRALCTLGSKHGDLIMLKELFDMYQSLQSNSEKQEWCKQLCVSQRGFKNVIKVREQL 603
++ R GD I L +Y S + + +WC + + + K +R+QL
Sbjct: 683 DKARMDFYEDTENVGDHI---ALLRVYNSWKEENYSTQWCCEKFIQSKSMKRARDIRDQL 739
Query: 604 TGYMKRLYNEPVEIKTKQDTLQPEEDIATNLLQPPDIAGVLKCFLYGFVKNTAIGMPDKS 663
G + ++ VE+ + P D+ + K L GF ++A + S
Sbjct: 740 LGLLNKI---GVELTS----------------NPNDLDAIKKAILAGFFPHSAKLQKNGS 780
Query: 664 FRTTPTGEPISIHPSSMLFMNSGDEIGPCPAILYIEHVFTTKGYARSVSRIELAWLQEIA 723
+R + + +HP+S LF S P ++Y E V TTK Y R + ++ WL EIA
Sbjct: 781 YRRVKEPQTVYVHPNSGLFGAS-----PSKWLVYHELVLTTKEYMRHTTEMKPEWLIEIA 835
>7303231 [A] KOG0922 DEAH-box RNA helicase
Length = 1242
Score = 434 bits (1116), Expect = e-121
Identities = 256/668 (38%), Positives = 390/668 (58%), Gaps = 36/668 (5%)
Query: 64 KTRALRLLKGRESLPVFQNKEKIVSHIKANPVTILIGETGSGKSTQIPQFLMDEISPMHK 123
K L L++ R+SLP+++ ++ ++ + N + I+IGETGSGK+TQI Q+L E +
Sbjct: 573 KKTDLTLVEQRQSLPIYKLRDDLIKAVTDNQILIVIGETGSGKTTQITQYL-GECGFTAR 631
Query: 124 GAIAVTQPRRVAAINLATRVAQEHGCRIGHEVGYSVRFDNKSHKTRTKLKYLTDGMLIRE 183
G I TQPRRVAA+++A RVA+E+GCR+G EVGY++RF++ + T +KY+TDGML+RE
Sbjct: 632 GKIGCTQPRRVAAMSVAKRVAEEYGCRLGQEVGYTIRFEDCT-SPETIIKYMTDGMLLRE 690
Query: 184 LMLDKNLSNYKCIIIDEAHERTILTDLILGFLKELQLTKRKDLKVIVMSATLQADLFSKF 243
+++ L +Y I++DEAHERTI TD++ G LK + KR +LK+IV SATL A FS++
Sbjct: 691 CLMEAELKSYSVIMLDEAHERTIHTDVLFGLLKTA-VQKRPELKLIVTSATLDAVKFSQY 749
Query: 244 FSNAPILFVEGRKFKVDRYYLPRPCEDIVDSVVRCSVQLNSSETTGDILCFLPGQEEIDK 303
F API + GR F V+ Y P D +D+ + +Q++ E GDIL FL GQEEID
Sbjct: 750 FFKAPIFTIPGRTFPVEVLYTKEPETDYLDASLITVMQIHLREPPGDILLFLTGQEEIDT 809
Query: 304 AVAILNKIIPYLDESVPRITAYPLYAALPPKDQAKVFEPLKGFKRKIVLATNIAETSVTI 363
A IL + + L VP + P+Y+ALP + Q ++F+P RK+V+ATNIAETS+TI
Sbjct: 810 ACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFDPAPAGSRKVVIATNIAETSLTI 869
Query: 364 PGVKYVIDCGLRKVKVWRHQLGLATLLTVPVSKASVAQRAGRAGRESSGKCFRLFTEADY 423
G+ YV+D G K KV+ + G+ +L+ P+S+A+ QRAGRAGR GK +RL+TE Y
Sbjct: 870 DGIFYVVDPGFVKQKVYNSKTGMDSLVVTPISQAAAKQRAGRAGRTGPGKTYRLYTERAY 929
Query: 424 K-QLPKQSESEITRCEITSPILMLKQYGVQDIVNWSWLEHPGKEAIISGLKELYELGALN 482
+ ++ EI R + + +L LK G+ D++++ +++ P E+++ L++L+ L AL+
Sbjct: 930 RDEMLPTPVPEIQRTNLATTVLQLKTMGINDLLHFDFMDAPPVESLVMALEQLHSLSALD 989
Query: 483 EQGRVTDRGRKMALLPLAPHLSNVLIHAQETQVLPYVIDIVSCLSVENLVLNPLPEERDE 542
++G +T GR+MA PL P+LS +LI + Q ++ IVS LSV+N+ P+++
Sbjct: 990 DEGLLTRLGRRMAEFPLEPNLSKMLIMSVALQCSDEILTIVSMLSVQNVFYR--PKDKQA 1047
Query: 543 VNERRRALCTLGSKHGDLIMLKELFDMYQSLQSNSEKQEWCKQLCVSQRGFKNVIKVREQ 602
+ ++++A GD + L +Y S ++N WC + V R K VR+Q
Sbjct: 1048 LADQKKA--KFNQAEGDHL---TLLAVYNSWKNNKFSNAWCYENFVQIRTLKRSQDVRKQ 1102
Query: 603 LTGYMKRLYNEPVEIKTKQDTLQPEEDIATNLLQPPDIAGVLKCFLYGFVKNTAIGMPDK 662
L G M R + V +Q K GF +N A P +
Sbjct: 1103 LLGIMDRHKLDVVSAGKNSVRIQ-------------------KAICSGFFRNAAKKDPQE 1143
Query: 663 SFRTTPTGEPISIHPSSMLFMNSGDEIGPCPAILYIEHVFTTKGYARSVSRIELAWLQEI 722
+RT + + IHPSS LF + ++Y E V TTK Y R V+ I+ WL E
Sbjct: 1144 GYRTLVDSQVVYIHPSSALFNRQPE------WVIYHELVQTTKEYMREVTTIDPKWLVEF 1197
Query: 723 ASGVLKQS 730
A + S
Sbjct: 1198 APSFFRFS 1205
>At1g32490 [A] KOG0923 mRNA splicing factor ATP-dependent RNA helicase
Length = 1038
Score = 433 bits (1114), Expect = e-121
Identities = 249/661 (37%), Positives = 394/661 (58%), Gaps = 34/661 (5%)
Query: 64 KTRALRLLKGRESLPVFQNKEKIVSHIKANPVTILIGETGSGKSTQIPQFLMDEISPMHK 123
KT L + R SLP++ +++++ ++ + V +++G+TGSGK+TQIPQ+L E +
Sbjct: 385 KTALEELQEVRRSLPIYTYRDQLLKAVEEHQVLVIVGDTGSGKTTQIPQYL-HEAGYTKR 443
Query: 124 GAIAVTQPRRVAAINLATRVAQEHGCRIGHEVGYSVRFDNKSHKTRTKLKYLTDGMLIRE 183
G + TQPRRVAA+++A RVAQE G ++GHEVGYS+RF++ + +T LKY+TDGML+RE
Sbjct: 444 GKVGCTQPRRVAAMSVAARVAQEMGVKLGHEVGYSIRFEDCT-SDKTVLKYMTDGMLLRE 502
Query: 184 LMLDKNLSNYKCIIIDEAHERTILTDLILGFLKELQLTKRKDLKVIVMSATLQADLFSKF 243
L+ + +L++Y +I+DEAHERT+ TD++ G +K++ R DLK+++ SAT+ A+ FS +
Sbjct: 503 LLGEPDLASYSVVIVDEAHERTLSTDILFGLVKDIARF-RPDLKLLISSATMDAEKFSDY 561
Query: 244 FSNAPILFVEGRKFKVDRYYLPRPCEDIVDSVVRCSVQLNSSETTGDILCFLPGQEEIDK 303
F API GR++ V+ Y P D +D+ + + ++ E GDIL F GQEEI+
Sbjct: 562 FDTAPIFSFPGRRYPVEINYTSAPEADYMDAAIVTILTIHVREPLGDILVFFTGQEEIET 621
Query: 304 AVAILNKIIPYLDESVPRITAYPLYAALPPKDQAKVFEPLKGFKRKIVLATNIAETSVTI 363
A IL I L + + P+YA LP + QAK+FEP RK+VLATNIAETS+TI
Sbjct: 622 AEEILKHRIRGLGTKIRELIICPIYANLPSELQAKIFEPTPEGARKVVLATNIAETSLTI 681
Query: 364 PGVKYVIDCGLRKVKVWRHQLGLATLLTVPVSKASVAQRAGRAGRESSGKCFRLFTEADY 423
G+KYV+D G K+K + + G+ +LL P+SKAS QRAGRAGR S GKC+RL+T +Y
Sbjct: 682 DGIKYVVDPGFSKMKSYNPRTGMESLLITPISKASATQRAGRAGRTSPGKCYRLYTAFNY 741
Query: 424 -KQLPKQSESEITRCEITSPILMLKQYGVQDIVNWSWLEHPGKEAIISGLKELYELGALN 482
L + + E+ R + S +L LK G+ D++N+ +++ P EA++ L+ L+ LGALN
Sbjct: 742 NNDLEENTVPEVQRTNLASVVLALKSLGIHDLINFDFMDPPPAEALVKSLELLFALGALN 801
Query: 483 EQGRVTDRGRKMALLPLAPHLSNVLIHAQETQVLPYVIDIVSCLSVENLVLNPLPEERDE 542
+ G +T GR+MA PL P LS +++ + + + +I I + LS+ + P+++
Sbjct: 802 KLGELTKAGRRMAEFPLDPMLSKMIVVSDKYKCSDEIISIAAMLSIGGSIFY-RPKDKQV 860
Query: 543 VNERRRALCTLGSKHGDLIMLKELFDMYQSLQSNSEKQEWCKQLCVSQRGFKNVIKVREQ 602
+ R G+ + +LK +Y S + + +WC + + R K +R+Q
Sbjct: 861 HADNARMNFHTGNVGDHIALLK----VYSSWKETNFSTQWCYENYIQVRSMKRARDIRDQ 916
Query: 603 LTGYMKRLYNEPVEIKTKQDTLQPEEDIATNLLQPPDIAGVLKCFLYGFVKNTAIGMPDK 662
L G ++R+ E DI++NL ++ V K + GF +TA +
Sbjct: 917 LEGLLERV----------------EIDISSNL---NELDSVRKSIVAGFFPHTAKLQKNG 957
Query: 663 SFRTTPTGEPISIHPSSMLFMNSGDEIGPCPAILYIEHVFTTKGYARSVSRIELAWLQEI 722
S+RT + + IHP+S L ++ P ++Y E V T+K Y R V+ ++ WL E+
Sbjct: 958 SYRTVKHPQTVHIHPNSGL-----SQVLP-RWVVYHELVLTSKEYMRQVTELKPEWLIEL 1011
Query: 723 A 723
A
Sbjct: 1012 A 1012
>7298547 [A] KOG0923 mRNA splicing factor ATP-dependent RNA helicase
Length = 894
Score = 431 bits (1109), Expect = e-120
Identities = 250/663 (37%), Positives = 390/663 (58%), Gaps = 34/663 (5%)
Query: 62 ELKTRALRLLKGRESLPVFQNKEKIVSHIKANPVTILIGETGSGKSTQIPQFLMDEISPM 121
E + + L L + R SLPV+ KE +++ +K + V I+ GETGSGK+TQ+PQ+L++
Sbjct: 237 EKERKRLTLDETRRSLPVYPFKEDLIAAVKEHQVLIIEGETGSGKTTQVPQYLVEAGFTK 296
Query: 122 HKGAIAVTQPRRVAAINLATRVAQEHGCRIGHEVGYSVRFDNKSHKTRTKLKYLTDGMLI 181
K I TQPRRVAA+++A RVA+E G ++G+EVGYS+RF++ + RT LKY+TDG L
Sbjct: 297 DKKMIGCTQPRRVAAMSVAARVAEEMGVKLGNEVGYSIRFEDCT-SDRTILKYMTDGTLH 355
Query: 182 RELMLDKNLSNYKCIIIDEAHERTILTDLILGFLKELQLTKRKDLKVIVMSATLQADLFS 241
RE + + +L++Y +IIDEAHERT+ TD++ G +K++ R +LK+++ SATL A+ FS
Sbjct: 356 REFLSEPDLASYSVMIIDEAHERTLHTDILFGLVKDIARF-RPELKLLISSATLDAEKFS 414
Query: 242 KFFSNAPILFVEGRKFKVDRYYLPRPCEDIVDSVVRCSVQLNSSETTGDILCFLPGQEEI 301
FF +API + GR++ VD +Y P D +D+ +Q+++++ GDIL FL GQ+EI
Sbjct: 415 AFFDDAPIFRIPGRRYPVDIFYTKAPEADYIDACCVSVLQIHATQPLGDILVFLTGQDEI 474
Query: 302 DKAVAILNKIIPYLDESVPRITAYPLYAALPPKDQAKVFEPLKGFKRKIVLATNIAETSV 361
+ +L+ + L + + P+YA LP QAK+FEP RK++LATNIAETS+
Sbjct: 475 ETCQEVLHDRVKRLGSKIRELIVIPVYANLPSDMQAKIFEPTPPNARKVILATNIAETSL 534
Query: 362 TIPGVKYVIDCGLRKVKVWRHQLGLATLLTVPVSKASVAQRAGRAGRESSGKCFRLFTEA 421
TI + YVID G K + + G+ +L+ VP+SKAS QRAGRAGR + GKCFRL+T
Sbjct: 535 TIDNIIYVIDPGFAKQNNFNSRTGMESLMVVPISKASANQRAGRAGRTAPGKCFRLYTAW 594
Query: 422 DYK-QLPKQSESEITRCEITSPILMLKQYGVQDIVNWSWLEHPGKEAIISGLKELYELGA 480
YK +L + EI R + + +LMLK G+ D++++ +L+ P E ++ L++LY LGA
Sbjct: 595 AYKHELEDNTVPEIQRINLGNAVLMLKALGINDLIHFDFLDPPPHETLVLALEQLYALGA 654
Query: 481 LNEQGRVTDRGRKMALLPLAPHLSNVLIHAQETQVLPYVIDIVSCLSVENLVLNPLPEER 540
LN G +T GR+MA P+ P + +L+ +++ + ++ I + LSV + + +
Sbjct: 655 LNHHGELTKLGRRMAEFPVDPMMGKMLLASEKYKCSEEMVTIAAMLSVNSAIFY---RPK 711
Query: 541 DEVNERRRALCTLGSKHGDLIMLKELFDMYQSLQSNSEKQEWCKQLCVSQRGFKNVIKVR 600
D++ A HGD + L ++++ + ++ +WC + + R K VR
Sbjct: 712 DKIIHADTARKNFNHMHGDHLSLLQVYNQWAETDYST---QWCYENFIQYRSMKRARDVR 768
Query: 601 EQLTGYMKRLYNEPVEIKTKQDTLQPEEDIATNLLQPPDIAGVLKCFLYGFVKNTAIGMP 660
EQL G M+R+ E D+ + L P+ V K G+ + A
Sbjct: 769 EQLVGLMQRV----------------EIDMVSCL---PETVNVRKAATAGYFYHVARLSK 809
Query: 661 DKSFRTTPTGEPISIHPSSMLFMNSGDEIGPCPAILYIEHVFTTKGYARSVSRIELAWLQ 720
++T + + IHP+S LF +E+ +LY E VFT+K Y R V IE WL
Sbjct: 810 GGHYKTIKHNQTVMIHPNSSLF----EELPRW--VLYHELVFTSKEYMRQVIEIESKWLL 863
Query: 721 EIA 723
E+A
Sbjct: 864 EVA 866
>YER013w [A] KOG0922 DEAH-box RNA helicase
Length = 1145
Score = 427 bits (1097), Expect = e-119
Identities = 242/661 (36%), Positives = 388/661 (58%), Gaps = 36/661 (5%)
Query: 64 KTRALRLLKGRESLPVFQNKEKIVSHIKANPVTILIGETGSGKSTQIPQFLMDEISPMHK 123
K +L + R++LPV+ + +++ ++ N +++GETGSGK+TQI Q+L DE +
Sbjct: 470 KRTSLPISAQRQTLPVYAMRSELIQAVRDNQFLVIVGETGSGKTTQITQYL-DEEGFSNY 528
Query: 124 GAIAVTQPRRVAAINLATRVAQEHGCRIGHEVGYSVRFDNKSHKTRTKLKYLTDGMLIRE 183
G I TQPRRVAA+++A RVA+E GC++GH+VGY++RF++ + T++KY+TDGML RE
Sbjct: 529 GMIGCTQPRRVAAVSVAKRVAEEVGCKVGHDVGYTIRFEDVTGPD-TRIKYMTDGMLQRE 587
Query: 184 LMLDKNLSNYKCIIIDEAHERTILTDLILGFLKELQLTKRKDLKVIVMSATLQADLFSKF 243
+LD +S Y I++DEAHERT+ TD++ LK+ + KR +LKVIV SATL + FS++
Sbjct: 588 ALLDPEMSKYSVIMLDEAHERTVATDVLFALLKKAAI-KRPELKVIVTSATLNSAKFSEY 646
Query: 244 FSNAPILFVEGRKFKVDRYYLPRPCEDIVDSVVRCSVQLNSSETTGDILCFLPGQEEIDK 303
F N PI+ + G+ F V+ Y P D +++ + C + ++ +E GDIL FL GQEEID
Sbjct: 647 FLNCPIINIPGKTFPVEVLYSQTPQMDYIEAALDCVIDIHINEGPGDILVFLTGQEEIDS 706
Query: 304 AVAILNKIIPYLDESVPRITAYPLYAALPPKDQAKVFEPLKGFKRKIVLATNIAETSVTI 363
IL + L +S+ + P+Y+ALP + Q+K+FEP RK+V ATNIAETS+TI
Sbjct: 707 CCEILYDRVKTLGDSIGELLILPVYSALPSEIQSKIFEPTPKGSRKVVFATNIAETSITI 766
Query: 364 PGVKYVIDCGLRKVKVWRHQLGLATLLTVPVSKASVAQRAGRAGRESSGKCFRLFTE-AD 422
G+ YV+D G K+ ++ + G+ L+ P+S+A QR GRAGR GKC+RL+TE A
Sbjct: 767 DGIYYVVDPGFAKINIYNARAGIEQLIVSPISQAQANQRKGRAGRTGPGKCYRLYTESAF 826
Query: 423 YKQLPKQSESEITRCEITSPILMLKQYGVQDIVNWSWLEHPGKEAIISGLKELYELGALN 482
Y ++ + + EI R ++ ILMLK G+ D++ + +++ P K +++ L ELY L +L+
Sbjct: 827 YNEMLENTVPEIQRQNLSHTILMLKAMGINDLLKFDFMDPPPKNLMLNALTELYHLQSLD 886
Query: 483 EQGRVTDRGRKMALLPLAPHLSNVLIHAQETQVLPYVIDIVSCLSVENLVLNPLPEERDE 542
++G++T+ G++M+L P+ P LS L+ + + Q ++ I+S LSV+N+ P +D
Sbjct: 887 DEGKLTNLGKEMSLFPMDPTLSRSLLSSVDNQCSDEIVTIISMLSVQNVFYRP----KDR 942
Query: 543 VNERRRALCTLGSKHGDLIMLKELFDMYQSLQSNSEKQEWCKQLCVSQRGFKNVIKVREQ 602
E +GD + L ++ +Q Q+N +Q +CK + R K V+ Q
Sbjct: 943 QLEADSKKAKFHHPYGDHLTLLNVYTRWQ--QANYSEQ-YCKTNFLHFRHLKRARDVKSQ 999
Query: 603 LTGYMKRLYNEPVEIKTKQDTLQPEEDIATNLLQPPDIAGVLKCFLYGFVKNTAIGMPDK 662
++ K++ + + + D ++ K F+ GF N A
Sbjct: 1000 ISMIFKKIGLKLISCHSDPDLIR-------------------KTFVSGFFMNAAKRDSQV 1040
Query: 663 SFRTTPTGEPISIHPSSMLFMNSGDEIGPCPAILYIEHVFTTKGYARSVSRIELAWLQEI 722
++T G + IHPSS L+ G E ++Y V T++ Y V+ IE WL E+
Sbjct: 1041 GYKTINGGTEVGIHPSSSLY---GKEY---EYVMYHSIVLTSREYMSQVTSIEPQWLLEV 1094
Query: 723 A 723
A
Sbjct: 1095 A 1095
>SPBC16H5.10c [A] KOG0925 mRNA splicing factor ATP-dependent RNA helicase
Length = 735
Score = 427 bits (1097), Expect = e-119
Identities = 261/677 (38%), Positives = 392/677 (57%), Gaps = 45/677 (6%)
Query: 59 SNKELKTRALRLLKGRESLPVFQNKEKIVSHIKANPVTILIGETGSGKSTQIPQFLM-DE 117
++K ++L+ R LPV+Q +E+ + N + + +GETGSGK+TQIPQF++ DE
Sbjct: 57 NDKPFSQNYFKILETRRELPVYQQREEFLKIYHENQIIVFVGETGSGKTTQIPQFVLYDE 116
Query: 118 ISPMHKGAIAVTQPRRVAAINLATRVAQEHGCRIGHEVGYSVRFDNKSHKTRTKLKYLTD 177
+ + IA TQPRRVAA+++A RVA E +G EVGY++RF++ S T LKY+TD
Sbjct: 117 LPHLTNTQIACTQPRRVAAMSVAKRVADEMDVDLGEEVGYNIRFEDCSGPN-TLLKYMTD 175
Query: 178 GMLIRELMLDKNLSNYKCIIIDEAHERTILTDLILGFLKELQLTKRKDLKVIVMSATLQA 237
GML+RE M D LS Y CII+DEAHERT+ TD+++G +K L T+R DLK+IVMSATL A
Sbjct: 176 GMLLREAMTDHMLSRYSCIILDEAHERTLATDILMGLMKRLA-TRRPDLKIIVMSATLDA 234
Query: 238 DLFSKFFSNAPILFVEGRKFKVDRYYLPRPCEDIVDSVVRCSVQLNSSETTGDILCFLPG 297
F K+F +AP+L V GR + V+ YY P D +++ +R +Q++ E GDIL FL G
Sbjct: 235 KKFQKYFFDAPLLAVPGRTYPVEIYYTQEPERDYLEAALRTVLQIHVEEGPGDILVFLTG 294
Query: 298 QEEIDKAVAILNKIIPYLDESVPR-----ITAYPLYAALPPKDQAKVFEPL-----KGFK 347
+EEI+ A KI D+ V + YPLY +LPP Q ++FEP G+
Sbjct: 295 EEEIEDAC---RKITLEADDLVREGAAGPLKVYPLYGSLPPNQQQRIFEPTPEDTKSGYG 351
Query: 348 RKIVLATNIAETSVTIPGVKYVIDCGLRKVKVWRHQLGLATLLTVPVSKASVAQRAGRAG 407
RK+V++TNIAETS+TI G+ YV+D G K K++ ++ + +LL P+SKAS QRAGRAG
Sbjct: 352 RKVVISTNIAETSLTIDGIVYVVDPGFSKQKIYNPRIRVESLLVSPISKASAQQRAGRAG 411
Query: 408 RESSGKCFRLFTEADY-KQLPKQSESEITRCEITSPILMLKQYGVQDIVNWSWLEHPGKE 466
R GKCFRL+TE + K+L +Q+ EI R ++S +L LK+ G+ D+V++ +++ P E
Sbjct: 412 RTRPGKCFRLYTEEAFRKELIEQTYPEILRSNLSSTVLELKKLGIDDLVHFDYMDPPAPE 471
Query: 467 AIISGLKELYELGALNEQGRVTDRGRKMALLPLAPHLSNVLIHAQETQVLPYVIDIVSCL 526
++ L+EL L L++ G +T GRK + PL P+L+ +LI + E V+ + + L
Sbjct: 472 TMMRALEELNYLNCLDDNGDLTPLGRKASEFPLDPNLAVMLIRSPEFYCSNEVLSLTALL 531
Query: 527 SVENLVLNPLPEERDEVNERRRALCTLGSKHGDLIMLKELFDMYQSLQSNSEKQEWCKQL 586
SV N+ + P R +E R+ H L ++Y + +S +WC
Sbjct: 532 SVPNVFVRP-NSARKLADEMRQQFTHPDGDH------LTLLNVYHAYKSGEGTADWCWNH 584
Query: 587 CVSQRGFKNVIKVREQLTGYMKRLYNEPVEIKTKQDTLQPEEDIATNLLQPPDIAGVLKC 646
+S R + VR+QL M+R E I T D +++ N+ + ++
Sbjct: 585 FLSHRALISADNVRKQLRRTMER--QEVELISTPFD----DKNYYVNIRR-----ALVSG 633
Query: 647 FLYGFVKNTAIGMPDKSFRTTPTGEPISIHPSSMLFMNSGDEIGPCPAILYIEHVFTTKG 706
F K +A G K++ T + +S+HPS L + ++Y E V TTK
Sbjct: 634 FFMQVAKKSANG---KNYVTMKDNQVVSLHPSCGLSVTP-------EWVVYNEFVLTTKS 683
Query: 707 YARSVSRIELAWLQEIA 723
+ R+V+ I WL E+A
Sbjct: 684 FIRNVTAIRPEWLIELA 700
>At2g35340 [A] KOG0923 mRNA splicing factor ATP-dependent RNA helicase
Length = 1087
Score = 425 bits (1093), Expect = e-118
Identities = 245/651 (37%), Positives = 387/651 (58%), Gaps = 34/651 (5%)
Query: 74 RESLPVFQNKEKIVSHIKANPVTILIGETGSGKSTQIPQFLMDEISPMHKGAIAVTQPRR 133
R++LP++ ++++++ +K + V I++GETGSGK+TQIPQ+L E G + TQPRR
Sbjct: 444 RKALPIYTYRDQLLNAVKDHQVLIIVGETGSGKTTQIPQYL-HEAGYTKLGKVGCTQPRR 502
Query: 134 VAAINLATRVAQEHGCRIGHEVGYSVRFDNKSHKTRTKLKYLTDGMLIRELMLDKNLSNY 193
VAA+++A RVAQE G ++GHEVGYS+RF++ + + +T LKY+TDGML+REL+ + +L +Y
Sbjct: 503 VAAMSVAARVAQEMGGKLGHEVGYSIRFEDCTSE-KTILKYMTDGMLLRELLGEPDLGSY 561
Query: 194 KCIIIDEAHERTILTDLILGFLKELQLTKRKDLKVIVMSATLQADLFSKFFSNAPILFVE 253
II+DEAHERT+ TD++ G +K++ R DLK+++ SAT+ A+ FS FF API
Sbjct: 562 SVIIVDEAHERTLRTDILFGLVKDIARA-RPDLKLLISSATMDAEKFSDFFDQAPIFRFP 620
Query: 254 GRKFKVDRYYLPRPCEDIVDSVVRCSVQLNSSETTGDILCFLPGQEEIDKAVAILNKIIP 313
GR++ VD + P D +D+ + + ++ E GD+L FLPGQEEI+ L I
Sbjct: 621 GRRYPVDICFTTAPEADYMDAAITTVLTIHVKEPLGDVLVFLPGQEEIEAVEENLKHKIR 680
Query: 314 YLDESVPRITAYPLYAALPPKDQAKVFEPLKGFKRKIVLATNIAETSVTIPGVKYVIDCG 373
L + + P+YA LP + QAK+FEP RK+VLATNIAETS+TI G+KYV+D G
Sbjct: 681 GLGTKIRELIICPIYANLPSELQAKIFEPTPEGARKVVLATNIAETSLTIDGIKYVVDPG 740
Query: 374 LRKVKVWRHQLGLATLLTVPVSKASVAQRAGRAGRESSGKCFRLFTEAD-YKQLPKQSES 432
K+K + + G+ +LL P+SKAS QR GRAGR S GKC+RL+T + Y L +
Sbjct: 741 FSKMKSYNPRTGMESLLVTPISKASATQRTGRAGRTSPGKCYRLYTAFNYYNDLEDNTVP 800
Query: 433 EITRCEITSPILMLKQYGVQDIVNWSWLEHPGKEAIISGLKELYELGALNEQGRVTDRGR 492
EI R + S +L LK G+ +++N+ +++ P EA+I L+ L+ LGALN+ G +T GR
Sbjct: 801 EIQRTNLASVVLSLKSLGIHNLLNFDFMDPPPSEALIKSLELLFALGALNQLGELTKAGR 860
Query: 493 KMALLPLAPHLSNVLIHAQETQVLPYVIDIVSCLSVENLVLNPLPEERDEVNERRRALCT 552
+MA PL P LS +++ + + + +I I + LS+ + P+++ +
Sbjct: 861 RMAEFPLDPMLSKMIVVSDKYKCSDEIISIAAMLSIGPSIFY-RPKDKQVHADNAMKNFH 919
Query: 553 LGSKHGDLIMLKELFDMYQSLQSNSEKQEWCKQLCVSQRGFKNVIKVREQLTGYMKRLYN 612
+G+ + LK +Y S + + +WC + + R K +R+QL G ++R+
Sbjct: 920 VGNVGDHIAFLK----IYNSWKETNYSTQWCYENYIQVRSMKRARDIRDQLEGLLERV-- 973
Query: 613 EPVEIKTKQDTLQPEEDIATNLLQPPDIAGVLKCFLYGFVKNTAIGMPDKSFRTTPTGEP 672
E D+++N ++ + K + GF +TA + S+RT +
Sbjct: 974 --------------EIDVSSN---ANELDSIRKSIVAGFFPHTAKLQKNGSYRTVKHPQT 1016
Query: 673 ISIHPSSMLFMNSGDEIGPCPAILYIEHVFTTKGYARSVSRIELAWLQEIA 723
+ IHP+S L ++ P ++Y + V T+K Y R V+ ++ WL EIA
Sbjct: 1017 VHIHPASGL-----SQVLP-RWVVYHQLVLTSKEYMRQVTELKPEWLIEIA 1061
>At2g47250 [A] KOG0925 mRNA splicing factor ATP-dependent RNA helicase
Length = 729
Score = 423 bits (1088), Expect = e-118
Identities = 254/678 (37%), Positives = 381/678 (55%), Gaps = 44/678 (6%)
Query: 59 SNKELKTRALRLLKGRESLPVFQNKEKIVSHIKANPVTILIGETGSGKSTQIPQFLMDEI 118
+ K R +L+ R LPV+ K+ ++ + +N IL+GETGSGK+TQIPQF++D +
Sbjct: 47 NGKAYSQRYFEILEKRRDLPVWLQKDDFLNTLNSNQTLILVGETGSGKTTQIPQFVLDAV 106
Query: 119 -----SPMHKGAIAVTQPRRVAAINLATRVAQEHGCRIGHEVGYSVRFDNKSHKTRTKLK 173
K + TQPRRVAA++++ RVA E IG EVGYS+RF++ + +RT LK
Sbjct: 107 VADNSDKGRKWLVGCTQPRRVAAMSVSRRVADEMDVSIGEEVGYSIRFEDCT-SSRTMLK 165
Query: 174 YLTDGMLIRELMLDKNLSNYKCIIIDEAHERTILTDLILGFLKELQLTKRKDLKVIVMSA 233
YLTDGML+RE M D L YK II+DEAHERT+ TD++ G LKE+ L R DLK++VMSA
Sbjct: 166 YLTDGMLLREAMADPLLERYKVIILDEAHERTLATDVLFGLLKEV-LRNRPDLKLVVMSA 224
Query: 234 TLQADLFSKFFSNAPILFVEGRKFKVDRYYLPRPCEDIVDSVVRCSVQLNSSETTGDILC 293
TL+A+ F ++FS AP++ V GR V+ +Y P D +++ +R VQ++ E GDIL
Sbjct: 225 TLEAEKFQEYFSGAPLMKVPGRLHPVEIFYTQEPERDYLEAAIRTVVQIHMCEPPGDILV 284
Query: 294 FLPGQEEIDKAVAILNKIIPYLDESVPRITAYPLYAALPPKDQAKVFEPLK-------GF 346
FL G+EEI+ A +NK + L + V + PLY+ LPP Q K+F+P
Sbjct: 285 FLTGEEEIEDACRKINKEVSNLGDQVGPVKVVPLYSTLPPAMQQKIFDPAPVPLTEGGPA 344
Query: 347 KRKIVLATNIAETSVTIPGVKYVIDCGLRKVKVWRHQLGLATLLTVPVSKASVAQRAGRA 406
RKIV++TNIAETS+TI G+ YVID G K KV+ ++ + +LL P+SKAS QR+GRA
Sbjct: 345 GRKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRIRVESLLVSPISKASAHQRSGRA 404
Query: 407 GRESSGKCFRLFTEADY-KQLPKQSESEITRCEITSPILMLKQYGVQDIVNWSWLEHPGK 465
GR GKCFRL+TE + L Q+ EI R + + +L LK+ G+ D+V++ +++ P
Sbjct: 405 GRTRPGKCFRLYTEKSFNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPPAP 464
Query: 466 EAIISGLKELYELGALNEQGRVTDRGRKMALLPLAPHLSNVLIHAQETQVLPYVIDIVSC 525
E ++ L+ L LGAL+++G +T G M+ PL P +S +LI + E ++ + +
Sbjct: 465 ETLMRALEVLNYLGALDDEGNLTKTGEIMSEFPLDPQMSKMLIVSPEFNCSNEILSVSAM 524
Query: 526 LSVENLVLNPLPEERDEVNERRRALCTLGSKHGDLIMLKELFDMYQSLQSNSEKQEWCKQ 585
LSV N + P R+ A G GD + L ++Y + + N+E WC +
Sbjct: 525 LSVPNCFVRP----REAQKAADEAKARFGHIDGDHL---TLLNVYHAYKQNNEDPNWCFE 577
Query: 586 LCVSQRGFKNVIKVREQLTGYMKRLYNEPVEIKTKQDTLQPEEDIATNLLQPPDIAGVLK 645
V+ R K+ VR+QL M R +N + +T+ + K
Sbjct: 578 NFVNNRAMKSADNVRQQLVRIMSR-FNLKM--------------CSTDFNSRDYYVNIRK 622
Query: 646 CFLYGFVKNTAIGMPDKSFRTTPTGEPISIHPSSMLFMNSGDEIGPCPAILYIEHVFTTK 705
L G+ A + T + + +HPS+ L ++Y E+V TT+
Sbjct: 623 AMLAGYFMQVAHLERTGHYLTVKDNQVVHLHPSNCLDHKP-------EWVIYNEYVLTTR 675
Query: 706 GYARSVSRIELAWLQEIA 723
+ R+V+ I WL ++A
Sbjct: 676 NFIRTVTDIRGEWLVDVA 693
>CE01889 [A] KOG0922 DEAH-box RNA helicase
Length = 1200
Score = 423 bits (1087), Expect = e-118
Identities = 242/662 (36%), Positives = 390/662 (58%), Gaps = 36/662 (5%)
Query: 68 LRLLKGRESLPVFQNKEKIVSHIKANPVTILIGETGSGKSTQIPQFLMDEISPMHKGAIA 127
L +++ RESLP+F K+ ++ + N + +++GETGSGK+TQ+ Q+ + E +G I
Sbjct: 531 LSMVEQRESLPIFALKKNLMEAMIDNQILVVVGETGSGKTTQMTQYAI-EAGLGRRGKIG 589
Query: 128 VTQPRRVAAINLATRVAQEHGCRIGHEVGYSVRFDNKSHKTRTKLKYLTDGMLIRELMLD 187
TQPRRVAA+++A RVA+E+GC++G +VGY++RF++ + + T +KY+TDGML+RE ++D
Sbjct: 590 CTQPRRVAAMSVAKRVAEEYGCKLGTDVGYTIRFEDCTSQD-TIIKYMTDGMLLRECLID 648
Query: 188 KNLSNYKCIIIDEAHERTILTDLILGFLKELQLTKRKDLKVIVMSATLQADLFSKFFSNA 247
+LS Y I++DEAHERTI TD++ G LK KR +LK+I+ SATL + FS++F A
Sbjct: 649 PDLSGYSLIMLDEAHERTIHTDVLFGLLKAAA-RKRPELKLIITSATLDSVKFSEYFLEA 707
Query: 248 PILFVEGRKFKVDRYYLPRPCEDIVDSVVRCSVQLNSSETTGDILCFLPGQEEIDKAVAI 307
PI + GR F V+ Y P D +++ +Q++ +E GD+L FL GQEEID + +
Sbjct: 708 PIFTIPGRTFPVEILYTREPESDYLEAAHITVMQIHLTEPPGDVLVFLTGQEEIDTSCEV 767
Query: 308 LNKIIPYLDESVPRITAYPLYAALPPKDQAKVFEPLKGFKRKIVLATNIAETSVTIPGVK 367
L + + + VP + P+Y ALP + Q ++F+P KRK+V+ATNIAETS+TI G+
Sbjct: 768 LYERMKSMGPDVPELIILPVYGALPSEMQTRIFDPAPAGKRKVVIATNIAETSLTIDGIF 827
Query: 368 YVIDCGLRKVKVWRHQLGLATLLTVPVSKASVAQRAGRAGRESSGKCFRLFTEADYK-QL 426
YV+D G K K++ + G+ +L+ P+S+A+ QR+GRAGR GKC+RL+TE ++ ++
Sbjct: 828 YVVDPGFVKQKIYNPKSGMDSLVVTPISQAAAKQRSGRAGRTGPGKCYRLYTERAFRDEM 887
Query: 427 PKQSESEITRCEITSPILMLKQYGVQDIVNWSWLEHPGKEAIISGLKELYELGALNEQGR 486
EI R + S +L LK G+ +++++ +++ P +++I+ L L+ L AL+ G
Sbjct: 888 LPTPVPEIQRTNLASTLLQLKAMGINNLIDFDFMDAPPLDSMITALNTLHTLSALDGDGL 947
Query: 487 VTDRGRKMALLPLAPHLSNVLIHAQETQVLPYVIDIVSCLSVENLVLNPLPEERDEVNER 546
+T GR+MA PL P LS +LI + + V+ IV+ L+V+N+ P E++D +++
Sbjct: 948 LTKLGRRMAEFPLEPSLSKLLIMSVDLGCSEEVLTIVAMLNVQNIFYRP-KEKQDHADQK 1006
Query: 547 RRALCTLGSKHGDLIMLKELFDMYQSLQSNSEKQEWCKQLCVSQRGFKNVIKVREQLTGY 606
+ GD + L +Y S +++ Q WC + + R K +R+QL G
Sbjct: 1007 K---AKFHQPEGDHL---TLLAVYNSWKNHHFSQPWCFENFIQVRSMKRAQDIRKQLLGI 1060
Query: 607 MKRLYNEPVEIKTKQDTLQPEEDIATNLLQPPDIAGVLKCFLYGFVKNTAIGMPDKSFRT 666
M R ++ + + + D++ V K GF +N A P + +RT
Sbjct: 1061 MDR--HKLLMVSCGR-----------------DVSRVQKAICSGFFRNAAKRDPQEGYRT 1101
Query: 667 TPTGEPISIHPSSMLFMNSGDEIGPCPAILYIEHVFTTKGYARSVSRIELAWLQEIASGV 726
G+ + IHPSS F + ++Y E V TTK Y R V+ I+ WL E A
Sbjct: 1102 LTDGQNVYIHPSSACFQQQPE------WVVYHELVMTTKEYMREVTAIDPKWLVEFAPSF 1155
Query: 727 LK 728
K
Sbjct: 1156 FK 1157
>At3g62310 [A] KOG0925 mRNA splicing factor ATP-dependent RNA helicase
Length = 726
Score = 422 bits (1084), Expect = e-117
Identities = 256/679 (37%), Positives = 382/679 (55%), Gaps = 44/679 (6%)
Query: 59 SNKELKTRALRLLKGRESLPVFQNKEKIVSHIKANPVTILIGETGSGKSTQIPQFLMDEI 118
+ K R +L+ R +LPV+ KE+ + + N IL+GETGSGK+TQIPQF++D +
Sbjct: 43 NGKPYSQRYYDILEKRRTLPVWLQKEEFLKTLNNNQTLILVGETGSGKTTQIPQFVIDAV 102
Query: 119 SP-----MHKGAIAVTQPRRVAAINLATRVAQEHGCRIGHEVGYSVRFDNKSHKTRTKLK 173
K + TQPRRVAA++++ RVA+E IG EVGYS+RF++ S RT LK
Sbjct: 103 DAETSDKRRKWLVGCTQPRRVAAMSVSRRVAEEMDVTIGEEVGYSIRFEDCS-SPRTVLK 161
Query: 174 YLTDGMLIRELMLDKNLSNYKCIIIDEAHERTILTDLILGFLKELQLTKRKDLKVIVMSA 233
YLTDGML+RE M D L YK II+DEAHERT+ TD++ G LKE+ L R DLK++VMSA
Sbjct: 162 YLTDGMLLREAMADPLLERYKVIILDEAHERTLATDVLFGLLKEV-LKNRPDLKLVVMSA 220
Query: 234 TLQADLFSKFFSNAPILFVEGRKFKVDRYYLPRPCEDIVDSVVRCSVQLNSSETTGDILC 293
TL+A+ F +FS AP++ V GR V+ +Y P D +++ +R VQ++ E GDIL
Sbjct: 221 TLEAEKFQDYFSGAPLMKVPGRLHPVEIFYTQEPERDYLEAAIRTVVQIHMCEPPGDILV 280
Query: 294 FLPGQEEIDKAVAILNKIIPYLDESVPRITAYPLYAALPPKDQAKVFEP-----LKGFK- 347
FL G+EEI+ A +NK + L + V I PLY+ LPP Q K+F+P +G
Sbjct: 281 FLTGEEEIEDACRKINKEVGNLGDQVGPIKVVPLYSTLPPAMQQKIFDPAPEPVTEGGPP 340
Query: 348 -RKIVLATNIAETSVTIPGVKYVIDCGLRKVKVWRHQLGLATLLTVPVSKASVAQRAGRA 406
RKIV++TNIAETS+TI G+ YVID G K KV+ ++ + +LL P+SKAS QR+GRA
Sbjct: 341 GRKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRIRVESLLVSPISKASAHQRSGRA 400
Query: 407 GRESSGKCFRLFTEADY-KQLPKQSESEITRCEITSPILMLKQYGVQDIVNWSWLEHPGK 465
GR GKCFRL+TE + L Q+ EI R + + +L LK+ G+ D+V++ +++ P
Sbjct: 401 GRTRPGKCFRLYTEKSFNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPPAP 460
Query: 466 EAIISGLKELYELGALNEQGRVTDRGRKMALLPLAPHLSNVLIHAQETQVLPYVIDIVSC 525
E ++ L+ L LGAL++ G +T G M+ PL P ++ +LI + E ++ + +
Sbjct: 461 ETLMRALEVLNYLGALDDDGNLTKTGEIMSEFPLDPQMAKMLIVSPEFNCSNEILSVSAM 520
Query: 526 LSVENLVLNPLPEERDEVNERRRALCTLGSKHGDLIMLKELFDMYQSLQSNSEKQEWCKQ 585
LSV N + P R+ A G GD + L ++Y + + N+E WC +
Sbjct: 521 LSVPNCFIRP----REAQKAADEAKARFGHIEGDHL---TLLNVYHAFKQNNEDPNWCYE 573
Query: 586 LCVSQRGFKNVIKVREQLTGYMKRLYNEPVEIKTKQDTLQPEEDIATNLLQPPDIAGVLK 645
++ R K+ VR+QL M R +N + +T+ + K
Sbjct: 574 NFINNRAMKSADNVRQQLVRIMSR-FNLKM--------------CSTDFNSRDYYINIRK 618
Query: 646 CFLYGFVKNTAIGMPDKSFRTTPTGEPISIHPSSMLFMNSGDEIGPCPAILYIEHVFTTK 705
L G+ A + T + + +HPS+ L ++Y E+V T++
Sbjct: 619 AMLAGYFMQVAHLERTGHYLTVKDNQVVHLHPSNCLDHKP-------EWVIYNEYVLTSR 671
Query: 706 GYARSVSRIELAWLQEIAS 724
+ R+V+ I WL ++AS
Sbjct: 672 NFIRTVTDIRGEWLVDVAS 690
>Hs20544129 [A] KOG0922 DEAH-box RNA helicase
Length = 703
Score = 421 bits (1082), Expect = e-117
Identities = 243/678 (35%), Positives = 393/678 (57%), Gaps = 45/678 (6%)
Query: 67 ALRLLKGRESLPVFQNKEKIVSHIKANPVTILIGETGSGKSTQIPQFLMDEISPMHKGAI 126
AL + + R+ LPVF+ + I+ I+ +++GETG GKSTQIPQ+L + +
Sbjct: 44 ALSIEQQRQKLPVFKLRNHILYLIENYQTVVIVGETGCGKSTQIPQYLAEAGWTAEGRVV 103
Query: 127 AVTQPRRVAAINLATRVAQEHGCRIGHEVGYSVRFDNKSHKTRTKLKYLTDGMLIRELML 186
VTQPRRVAA+ +A RVA+E G +GHEVGY +RFD+ + + T++K+LTDGML+RE+M+
Sbjct: 104 GVTQPRRVAAVTVAGRVAEERGAVLGHEVGYCIRFDDCTDQLATRIKFLTDGMLVREMMV 163
Query: 187 DKNLSNYKCIIIDEAHERTILTDLILGFLKELQLTKRKDLKVIVMSATLQADLFSKFFS- 245
D L+ Y I++DEAHERT+ TD+ +G LK++Q KR DL++IV SATL AD F FF+
Sbjct: 164 DPLLTKYSVIMLDEAHERTLYTDIAIGLLKKIQ-KKRGDLRLIVASATLDADKFRDFFNQ 222
Query: 246 ---------NAPILFVEGRKFKVDRYYLPRPCEDIVDSVVRCSVQLNSSETTGDILCFLP 296
IL VEGR F VD +YL P D + S V V+++ +E GD+L FL
Sbjct: 223 NETSDPARDTCVILTVEGRTFPVDIFYLQSPVPDYIKSTVETVVKIHQTEGDGDVLAFLT 282
Query: 297 GQEEIDKAVAILNKIIPYLDESVPR--ITAYPLYAALPPKDQAKVFEPLKGFKRKIVLAT 354
GQEE++ V++L + L + + + P+YA LP +Q KVFE + RK+++AT
Sbjct: 283 GQEEVETVVSMLIEQARALARTGMKRHLRVLPMYAGLPSFEQMKVFERVSRSVRKVIVAT 342
Query: 355 NIAETSVTIPGVKYVIDCGLRKVKVWRHQLGLATLLTVPVSKASVAQRAGRAGRESSGKC 414
N+AETS+TI G+ YVIDCG K++ + + + L+ VPVS+AS QRAGR GR SGKC
Sbjct: 343 NVAETSITISGIVYVIDCGFVKLRAYNPRTAIECLVVVPVSQASANQRAGRGGRSRSGKC 402
Query: 415 FRLFTEADYKQLPKQSESEITRCEITSPILMLKQYGVQDIVNWSWLEHPGKEAIISGLKE 474
+RL+TE + +LP+ + E+ R + IL LK G+ +++ + ++ P ++++ L+
Sbjct: 403 YRLYTEEAFDKLPQSTVPEMQRSNLAPVILQLKALGIDNVLRFHFMSPPPAQSMVQALEL 462
Query: 475 LYELGALNEQGRVTD-RGRKMALLPLAPHLSNVLIHAQETQVLPYVIDIVSCLSVENLVL 533
LY LG L++ R+T+ G ++A PL P + +L+ + ++ I + + ++N+ +
Sbjct: 463 LYALGGLDKDCRLTEPLGMRIAEFPLNPMFAKMLLESGNFGCSQEILSIAAMMQIQNIFV 522
Query: 534 NPLPEERDEVNERRRALCTLGSKHGDLIMLKELFDMYQSLQSNSEKQEWCKQLCVSQRGF 593
P ++ + R+ + GD + + ++Y++ +++ +WC++ ++ +G
Sbjct: 523 VPPNQKSHAIRVHRK----FAVEEGDHL---TMLNIYEAFIKHNKDSKWCQEHFLNYKGL 575
Query: 594 KNVIKVREQLTGYMKRLYNEPVEIKTKQDTLQPEEDIATNLLQPPDIAGVLKCFLYGFVK 653
VREQL K+L V+ + + + + + D+ VL+C + GF
Sbjct: 576 VRAATVREQL----KKLL---VKFQVPRKSSEGDPDL------------VLRCIVSGFFA 616
Query: 654 NTAIGMPDKSFRTTPTGEPISIHPSSMLFMNSGDEIGPCPAILYIEHVFTTKGYARSVSR 713
N A ++RT + IHP+S+L+ P ++Y E + T+K Y R V+
Sbjct: 617 NAARFHSTGAYRTIRDDHELHIHPASVLYAEK-----PPRWVIYNEVIQTSKYYMRDVTA 671
Query: 714 IELAWLQEIASGVLKQST 731
IE AWL E+A +Q T
Sbjct: 672 IESAWLLELAPHFYQQGT 689
>CE15592 [A] KOG0923 mRNA splicing factor ATP-dependent RNA helicase
Length = 1008
Score = 420 bits (1080), Expect = e-117
Identities = 256/670 (38%), Positives = 382/670 (56%), Gaps = 36/670 (5%)
Query: 56 DHVSNKELKTRALRLLKGRESLPVFQNKEKIVSHIKANPVTILIGETGSGKSTQIPQFLM 115
+ V E + + + + + R+SLPV+ ++ + +K + V I+ GETGSGK+TQ+PQ+L
Sbjct: 343 EEVVETEAEKKKMSIEETRKSLPVYAFRDAFIEAVKEHQVLIIEGETGSGKTTQLPQYLY 402
Query: 116 DEISPMHKGAIAVTQPRRVAAINLATRVAQEHGCRIGHEVGYSVRFDNKSHKTRTKLKYL 175
+ I TQPRRVAA+++A RVA E GC++G +VGYS+RF++ + + +T LKY+
Sbjct: 403 EAGFCEGGKRIGCTQPRRVAAMSVAARVADEVGCKLGTQVGYSIRFEDCTSE-KTVLKYM 461
Query: 176 TDGMLIRELMLDKNLSNYKCIIIDEAHERTILTDLILGFLKELQLTKRKDLKVIVMSATL 235
TDGML+RE + + +L++Y ++IDEAHERT+ TD++ G +K++ RKDLK+++ SATL
Sbjct: 462 TDGMLLREFLNEPDLASYSVMMIDEAHERTLHTDILFGLVKDIARF-RKDLKLLISSATL 520
Query: 236 QADLFSKFFSNAPILFVEGRKFKVDRYYLPRPCEDIVDSVVRCSVQLNSSETT-GDILCF 294
A+ FS FF +API + GR+F VD YY P D VD+ + +Q++ ++ GDIL F
Sbjct: 521 DAEKFSSFFDDAPIFRIPGRRFPVDIYYTQAPEADYVDAAIVTIMQIHLTQPLPGDILVF 580
Query: 295 LPGQEEIDKAVAILNKIIPYLDESVPRITAYPLYAALPPKDQAKVFEPLKGFKRKIVLAT 354
L GQEEI+ L + L + + P+YA LP QAK+FEP RK+VLAT
Sbjct: 581 LTGQEEIETVQEALMERSKALGSKIKELIPLPVYANLPSDLQAKIFEPTPKDARKVVLAT 640
Query: 355 NIAETSVTIPGVKYVIDCGLRKVKVWRHQLGLATLLTVPVSKASVAQRAGRAGRESSGKC 414
NIAETSVTI G+ YVID G K + + G+ L V +SKA+ QRAGRAGR GKC
Sbjct: 641 NIAETSVTIDGINYVIDPGFSKQNSFDARSGVEHLHVVTISKAAANQRAGRAGRTGPGKC 700
Query: 415 FRLFTEADYK-QLPKQSESEITRCEITSPILMLKQYGVQDIVNWSWLEHPGKEAIISGLK 473
FRL+T YK +L +Q EI R + + +LMLK G+ D+V++ +L+ P +E ++ L+
Sbjct: 701 FRLYTAWAYKHELEEQPIPEIQRTNLGNVVLMLKSLGIHDLVHFDFLDPPPQETLVIALE 760
Query: 474 ELYELGALNEQGRVTDRGRKMALLPLAPHLSNVLIHAQETQVLPYVIDIVSCLSVENLVL 533
+LY LGALN +G +T GR+MA P P +S ++I +++ + ++ I + LS V
Sbjct: 761 QLYALGALNHRGELTKLGRRMAEFPCDPCMSKMIIASEKYECSEEIVTIAAMLSCNAAVF 820
Query: 534 NPLPEERDEVNERRRALCTLGSKHGDLIMLKELFDMYQSLQSNSEKQEWCKQLCVSQRGF 593
+ + R+ S GD I L ++Y Q +S Q WC + V R
Sbjct: 821 YRPKAQVIHADSARKG---FWSPAGDHI---TLMNVYNKWQESSFSQRWCVENYVQHRTM 874
Query: 594 KNVIKVREQLTGYMKRLYNEPVEIKTKQDTLQPEEDIATNLLQPPDIAGVLKCFLYGFVK 653
K VR+QL G ++R VEI+TK T D + K G+
Sbjct: 875 KRARDVRDQLVGLLER-----VEIETKSST---------------DTIKIRKAITAGYFY 914
Query: 654 NTAIGMPDKSFRTTPTGEPISIHPSSMLFMNSGDEIGPCPAILYIEHVFTTKGYARSVSR 713
N + ++T HP+S LF + ++Y E VFT+K + R +S
Sbjct: 915 NVSKLDNTGHYKTVKHKHTTHPHPNSCLFEETP------RWVVYFELVFTSKEFMREMSE 968
Query: 714 IELAWLQEIA 723
IE WL E+A
Sbjct: 969 IESGWLLEVA 978
>Hs20336302 [A] KOG0922 DEAH-box RNA helicase
Length = 707
Score = 419 bits (1078), Expect = e-117
Identities = 251/667 (37%), Positives = 387/667 (57%), Gaps = 42/667 (6%)
Query: 74 RESLPVFQNKEKIVSHIKANPVTILIGETGSGKSTQIPQFLMDEISPMHKGAIAVTQPRR 133
R SLP+FQ + ++++ ++ +LIGETGSGK+TQIPQ+L E +G IAVTQPRR
Sbjct: 71 RRSLPIFQARGQLLAQLRNLDNAVLIGETGSGKTTQIPQYLY-EGGISRQGIIAVTQPRR 129
Query: 134 VAAINLATRVAQEHGCRIGHEVGYSVRFDNKSHKTRTKLKYLTDGMLIRELMLDKNLSNY 193
VAAI+LATRV+ E +G VGY+VRFD+ + + T++K+LTDGML+RE + D L Y
Sbjct: 130 VAAISLATRVSDEKRTELGKLVGYTVRFDDVTSED-TRIKFLTDGMLLREAISDSLLRKY 188
Query: 194 KCIIIDEAHERTILTDLILGFLKELQLTKRK----DLKVIVMSATLQADLFSKFFSNAPI 249
C+I+DEAHERTI TD++ G +K Q +++ LKVIVMSAT+ DLFS++F+ AP+
Sbjct: 189 SCVILDEAHERTIHTDVLFGVVKAAQKRRKELGKLPLKVIVMSATMDVDLFSQYFNGAPV 248
Query: 250 LFVEGRKFKVDRYYLPRPCEDIVDSVVRCSVQLNS-SETTGDILCFLPGQEEIDKAVAIL 308
L++EGR+ + +Y +P D + + + Q++ + ++ DIL FL GQEEI+
Sbjct: 249 LYLEGRQHPIQVFYTKQPQNDYLHAALVSVFQIHQEAPSSQDILVFLTGQEEIEAMSKTC 308
Query: 309 NKIIPYLDESVPRITAYPLYAALPPKDQAKVFEPLKGFKRKIVLATNIAETSVTIPGVKY 368
I +L + P + PLYA+LP Q +VF+ RK++++TNIAETS+TI G+KY
Sbjct: 309 RDIAKHLPDGCPAMLVLPLYASLPYAQQLRVFQGAPKGYRKVIISTNIAETSITITGIKY 368
Query: 369 VIDCGLRKVKVWRHQLGLATLLTVPVSKASVAQRAGRAGRESSGKCFRLFTEADYKQLPK 428
V+D G+ K K + GL L VSK QR GRAGRE SG C+RL+TE ++++ K
Sbjct: 369 VVDTGMVKAKKYNPDSGLEVLAVQRVSKTQAWQRTGRAGREDSGICYRLYTEDEFEKFDK 428
Query: 429 QSESEITRCEITSPILMLKQYGVQDIVNWSWLEHPGKEAIISGLKELYELGAL---NEQG 485
+ EI RC + S +L L V +++ + ++ P + I + + +L LGAL ++Q
Sbjct: 429 MTVPEIQRCNLASVMLQLLAMKVPNVLTFDFMSKPSPDHIQAAIAQLDLLGALEHKDDQL 488
Query: 486 RVTDRGRKMALLPLAPHLSNVLIHAQETQVLPYVIDIVSCLSVENLVLNPLPEERDEVNE 545
+T GRKMA PL P + ++ + + ++ IVS LSV++++ NP P R+EV
Sbjct: 489 TLTPMGRKMAAFPLEPKFAKTILMSPKFHCTEEILTIVSLLSVDSVLHNP-PSRREEVQG 547
Query: 546 RRRALCTLGSKHGDLIMLKELFDMYQSLQSNSEKQEWCKQLCVSQRGFKNVIKVREQLTG 605
R+ S GD + L ++ +++L N ++WCK+ V+ + V +VR QL
Sbjct: 548 VRKKFI---SSEGDHMTLLNIYRTFKNLGGN---KDWCKENFVNSKNMTLVAEVRAQL-- 599
Query: 606 YMKRLYNEPVEIKTKQDTLQPEEDIATNLLQPPDIAGVLKCFLYGFVKNTAIGMPDKSFR 665
+ L+ IA++ D+ V +C + +TA PD ++
Sbjct: 600 --------------RDICLKMSMPIASS---RGDVESVRRCLAHSLFMSTAELQPDGTYA 642
Query: 666 TTPTGEPISIHPSSMLFMNSGDEIGPCPAILYIEHVFTTKGYARSVSRIELAWLQEIASG 725
TT T +P++IHPSS+LF P ++Y E ++T K Y R + I+ WL E A
Sbjct: 643 TTDTHQPVAIHPSSVLF-----HCKPA-CVVYTELLYTNKCYMRDLCVIDAQWLYEAAPE 696
Query: 726 VLKQSTR 732
++ R
Sbjct: 697 YFRRKLR 703
>Hs20555648 [A] KOG0923 mRNA splicing factor ATP-dependent RNA helicase
Length = 1041
Score = 414 bits (1063), Expect = e-115
Identities = 246/651 (37%), Positives = 380/651 (57%), Gaps = 35/651 (5%)
Query: 74 RESLPVFQNKEKIVSHIKANPVTILIGETGSGKSTQIPQFLMDEISPMHKGAIAVTQPRR 133
R SLPVF +E++++ I + V I+ GETGSGK+TQIPQ+L +E IA TQPRR
Sbjct: 396 RRSLPVFPFREELLAAIANHQVLIIEGETGSGKTTQIPQYLFEEGYTNKGMKIACTQPRR 455
Query: 134 VAAINLATRVAQEHGCRIGHEVGYSVRFDNKSHKTRTKLKYLTDGMLIRELMLDKNLSNY 193
VAA+++A RVA+E G ++G+EVGYS+RF++ + + RT L+Y+TDGML+RE + + +L++Y
Sbjct: 456 VAAMSVAARVAREMGVKLGNEVGYSIRFEDCTSE-RTVLRYMTDGMLLREFLSEPDLASY 514
Query: 194 KCIIIDEAHERTILTDLILGFLKELQLTKRKDLKVIVMSATLQADLFSKFFSNAPILFVE 253
+++DEAHERT+ TD++ G +K++ R +LKV+V SAT+ FS FF +AP+ +
Sbjct: 515 SVVMVDEAHERTLHTDILFGLIKDVARF-RPELKVLVASATMDTARFSTFFDDAPVFRIP 573
Query: 254 GRKFKVDRYYLPRPCEDIVDSVVRCSVQLNSSETTGDILCFLPGQEEIDKAVAILNKIIP 313
GR+F VD +Y P D +++ V +Q++ ++ GDIL FL GQEEI+ A +L
Sbjct: 574 GRRFPVDIFYTKAPEADYLEACVVSVLQIHVTQPPGDILVFLTGQEEIEAACEMLQDRCR 633
Query: 314 YLDESVPRITAYPLYAALPPKDQAKVFEPLKGFKRKIVLATNIAETSVTIPGVKYVIDCG 373
L + + P+YA LP QA++F+P RK+V+ATNIAETS+TI G+ YV+D G
Sbjct: 634 RLGSKIRELLVLPIYANLPSDMQARIFQPTPPGARKVVVATNIAETSLTIEGIIYVLDPG 693
Query: 374 LRKVKVWRHQLGLATLLTVPVSKASVAQRAGRAGRESSGKCFRLFTEADYK-QLPKQSES 432
K K + + G+ +L P SKAS QRAGRAGR ++GKCFRL+T Y+ +L + +
Sbjct: 694 FCKQKSYNPRTGMESLTVTPCSKASANQRAGRAGRVAAGKCFRLYTAWAYQHELEETTVP 753
Query: 433 EITRCEITSPILMLKQYGVQDIVNWSWLEHPGKEAIISGLKELYELGALNEQGRVTDRGR 492
EI R + + +L+LK G+ D++++ +L+ P E ++ L++LY LGALN G +T GR
Sbjct: 754 EIQRTSLGNVVLLLKSLGIHDLMHFDFLDPPPYETLLLALEQLYALGALNHLGELTTSGR 813
Query: 493 KMALLPLAPHLSNVLIHAQETQVLPYVIDIVSCLSVENLVLNPLPEERDEVNERRRALCT 552
KMA LP+ P LS +++ +++ ++ + + LSV N + +D+V A
Sbjct: 814 KMAELPVDPMLSKMILASEKYSCSEEILTVAAMLSVNNSIFY---RPKDKVVHADNARVN 870
Query: 553 LGSKHGDLIMLKELFDMYQSLQSNSEKQEWCKQLCVSQRGFKNVIKVREQLTGYMKRLYN 612
GD ++ L ++Y + +WC + V R + VREQL G ++R+
Sbjct: 871 FFLPGGDHLV---LLNVYTQWAESGYSSQWCYENFVQFRSMRRARDVREQLEGLLERV-- 925
Query: 613 EPVEIKTKQDTLQPEEDIATNLLQPPDIAGVLKCFLYGFVKNTAIGMPDKSFRTTPTGEP 672
++ + Q D V K G+ +TA + +RT +
Sbjct: 926 ----------------EVGLSSCQ-GDYIRVRKAITAGYFYHTA-RLTRSGYRTVKQQQT 967
Query: 673 ISIHPSSMLFMNSGDEIGPCPAILYIEHVFTTKGYARSVSRIELAWLQEIA 723
+ IHP+S LF +LY E V TTK + R V IE +WL E+A
Sbjct: 968 VFIHPNSSLFEQQP------RWLLYHELVLTTKEFMRQVLEIESSWLLEVA 1012
>Hs4503293 [A] KOG0923 mRNA splicing factor ATP-dependent RNA helicase
Length = 1041
Score = 411 bits (1057), Expect = e-114
Identities = 246/651 (37%), Positives = 379/651 (57%), Gaps = 35/651 (5%)
Query: 74 RESLPVFQNKEKIVSHIKANPVTILIGETGSGKSTQIPQFLMDEISPMHKGAIAVTQPRR 133
R SLPVF +E++++ I + V I+ GETGSGK+TQIPQ+L +E IA TQPRR
Sbjct: 396 RRSLPVFPFREELLAAIANHQVLIIEGETGSGKTTQIPQYLFEEGYTNKGMKIACTQPRR 455
Query: 134 VAAINLATRVAQEHGCRIGHEVGYSVRFDNKSHKTRTKLKYLTDGMLIRELMLDKNLSNY 193
VAA+++A RVA+E G ++G+EVGYS+RF++ + + RT L+Y+TDGML+RE + + +L++Y
Sbjct: 456 VAAMSVAARVAREMGVKLGNEVGYSIRFEDCTSE-RTVLRYMTDGMLLREFLSEPDLASY 514
Query: 194 KCIIIDEAHERTILTDLILGFLKELQLTKRKDLKVIVMSATLQADLFSKFFSNAPILFVE 253
+++DEAHERT+ TD++ G +K++ R +LKV+V SAT+ FS FF +AP+ +
Sbjct: 515 SVVMVDEAHERTLHTDILFGLIKDVARF-RPELKVLVASATMDTARFSTFFDDAPVFRIP 573
Query: 254 GRKFKVDRYYLPRPCEDIVDSVVRCSVQLNSSETTGDILCFLPGQEEIDKAVAILNKIIP 313
GR+F VD +Y P D +++ V +Q++ ++ GDIL FL GQEEI+ A +L
Sbjct: 574 GRRFPVDIFYTKAPEADYLEACVVSVLQIHVTQPPGDILVFLTGQEEIEAACEMLQDPCR 633
Query: 314 YLDESVPRITAYPLYAALPPKDQAKVFEPLKGFKRKIVLATNIAETSVTIPGVKYVIDCG 373
L + + P+YA LP QA++F+P RK+V+ATNIAETS TI G+ YV+D G
Sbjct: 634 RLGSKIRELLVLPIYANLPSDMQARIFQPTPPGARKVVVATNIAETSPTIEGIIYVLDPG 693
Query: 374 LRKVKVWRHQLGLATLLTVPVSKASVAQRAGRAGRESSGKCFRLFTEADYK-QLPKQSES 432
K K + + G+ +L P SKAS QRAGRAGR ++GKCFRL+T Y+ +L + +
Sbjct: 694 FCKQKSYNPRTGMESLTVTPCSKASANQRAGRAGRVAAGKCFRLYTAWAYQHELEETTVP 753
Query: 433 EITRCEITSPILMLKQYGVQDIVNWSWLEHPGKEAIISGLKELYELGALNEQGRVTDRGR 492
EI R + + +L+LK G+ D++++ +L+ P E ++ L++LY LGALN G +T GR
Sbjct: 754 EIQRTSLGNVVLLLKSLGIHDLMHFDFLDPPPYETLLLTLEQLYALGALNHLGELTTSGR 813
Query: 493 KMALLPLAPHLSNVLIHAQETQVLPYVIDIVSCLSVENLVLNPLPEERDEVNERRRALCT 552
KMA LP+ P LS +++ +++ ++ + + LSV N + +D+V A
Sbjct: 814 KMAELPVDPMLSKMILASEKYSCSEEILTVAAMLSVNNSIFY---RPKDKVVHADNARVN 870
Query: 553 LGSKHGDLIMLKELFDMYQSLQSNSEKQEWCKQLCVSQRGFKNVIKVREQLTGYMKRLYN 612
GD ++ L ++Y + +WC + V R + VREQL G ++R+
Sbjct: 871 FFLPGGDHLV---LLNVYTQWAESGYSSQWCCENFVQFRSMRRARDVREQLEGLLERV-- 925
Query: 613 EPVEIKTKQDTLQPEEDIATNLLQPPDIAGVLKCFLYGFVKNTAIGMPDKSFRTTPTGEP 672
++ + Q D V K G+ +TA + +RT +
Sbjct: 926 ----------------EVGLSSCQ-GDYIRVRKAITAGYFYHTA-RLTRSGYRTVKQQQT 967
Query: 673 ISIHPSSMLFMNSGDEIGPCPAILYIEHVFTTKGYARSVSRIELAWLQEIA 723
+ IHP+S LF +LY E V TTK + R V IE +WL E+A
Sbjct: 968 VFIHPNSSLFEQQP------RWLLYHELVLTTKEFMRQVLEIESSWLLEVA 1012
>CE01334 [A] KOG0925 mRNA splicing factor ATP-dependent RNA helicase
Length = 739
Score = 409 bits (1052), Expect = e-114
Identities = 248/680 (36%), Positives = 378/680 (55%), Gaps = 46/680 (6%)
Query: 59 SNKELKTRALRLLKGRESLPVFQNKEKIVSHIKANPVTILIGETGSGKSTQIPQFLMDEI 118
+N+ R + + R LPV++ KEK + ++ N L+GETGSGK+TQIPQ+ ++ +
Sbjct: 58 NNQPFSNRYWAIWEKRSQLPVWEYKEKFMELLRNNQCITLVGETGSGKTTQIPQWAVEFM 117
Query: 119 SPMHKGA-------IAVTQPRRVAAINLATRVAQEHGCRIGHEVGYSVRFDNKSHKTRTK 171
+G +A TQPRRVAA+++ATRVA+E +G EVGYS+RF++ + RT
Sbjct: 118 KQQQQGQPPGQARLVACTQPRRVAAMSVATRVAEEMDVVLGQEVGYSIRFEDCISE-RTV 176
Query: 172 LKYLTDGMLIRELMLDKNLSNYKCIIIDEAHERTILTDLILGFLKELQLTKRKDLKVIVM 231
LKY TDGML+RE M L YK +I+DEAHERT+ TD+++G +KE+ + R D+KV++M
Sbjct: 177 LKYCTDGMLLREAMNSPLLDKYKVLILDEAHERTLATDILMGLIKEI-VRNRADIKVVIM 235
Query: 232 SATLQADLFSKFFSNAPILFVEGRKFKVDRYYLPRPCEDIVDSVVRCSVQLNS-SETTGD 290
SATL A F ++F + P+L V GR F V+ ++ P +D +++ +R +Q++ E GD
Sbjct: 236 SATLDAGKFQRYFEDCPLLSVPGRTFPVEIFFTPNAEKDYLEAAIRTVIQIHMVEEVEGD 295
Query: 291 ILCFLPGQEEIDKAVAILNKIIPYLDESVPRITAYPLYAALPPKDQAKVFEPLK------ 344
IL FL GQEEI++A +++ I L ++ PLY+ LPP Q ++FEP
Sbjct: 296 ILLFLTGQEEIEEACKRIDREIQALGADAGALSCIPLYSTLPPAAQQRIFEPAPPNRPNG 355
Query: 345 GFKRKIVLATNIAETSVTIPGVKYVIDCGLRKVKVWRHQLGLATLLTVPVSKASVAQRAG 404
RK V++TNIAETS+TI GV +VID G K KV+ ++ + +LL P+SKAS QRAG
Sbjct: 356 AISRKCVISTNIAETSLTIDGVVFVIDPGFSKQKVYNPRIRVESLLVCPISKASAMQRAG 415
Query: 405 RAGRESSGKCFRLFTEADY-KQLPKQSESEITRCEITSPILMLKQYGVQDIVNWSWLEHP 463
RAGR GKCFRL+TE Y ++ Q+ EI R + S +L LK+ G +D+V++ +++ P
Sbjct: 416 RAGRTKPGKCFRLYTETAYGSEMQDQTYPEILRSNLGSVVLQLKKLGTEDLVHFDFMDPP 475
Query: 464 GKEAIISGLKELYELGALNEQGRVTDRGRKMALLPLAPHLSNVLIHAQETQVLPYVIDIV 523
E ++ L+ L L A+N+ G +T+ G MA PL P L+ +LI + E ++ I
Sbjct: 476 APETLMRALELLNYLQAINDDGELTELGSLMAEFPLDPQLAKMLITSTELNCSNEILSIT 535
Query: 524 SCLSVENLVLNPLPEERDEVNERRRALCTLGSKHGDLIMLKELFDMYQSLQSNSEKQEWC 583
+ LSV + P E R E +E + + H L ++Y S + N E +WC
Sbjct: 536 AMLSVPQCWVRP-NEMRTEADEAKARFAHIDGDH------LTLLNVYHSFKQNQEDPQWC 588
Query: 584 KQLCVSQRGFKNVIKVREQLTGYMKRLYNEPVEIKTKQDTLQPEEDIATNLLQPPDIAGV 643
++ R K VR QL+ M + YN ++T+ +
Sbjct: 589 YDNFINYRTMKTADTVRTQLSRVMDK-YN--------------LRRVSTDFKSRDYYLNI 633
Query: 644 LKCFLYGFVKNTAIGMPDKSFRTTPTGEPISIHPSSMLFMNSGDEIGPCPAILYIEHVFT 703
K + GF A + T + +++HPS++L LY E V T
Sbjct: 634 RKALVAGFFMQVAHLERSGHYVTVKDNQLVNLHPSTVLDHKP-------EWALYNEFVLT 686
Query: 704 TKGYARSVSRIELAWLQEIA 723
TK + R+V+ + WL +IA
Sbjct: 687 TKNFIRTVTDVRPEWLLQIA 706
>YNR011c [A] KOG0923 mRNA splicing factor ATP-dependent RNA helicase
Length = 876
Score = 407 bits (1045), Expect = e-113
Identities = 250/675 (37%), Positives = 385/675 (57%), Gaps = 34/675 (5%)
Query: 66 RALRLLKGRESLPVFQNKEKIVSHIKANPVTILIGETGSGKSTQIPQFLMDE-ISPMHKG 124
R L + + R+ LPV Q K++++ IK N V I++GETGSGK+TQ+PQ+L+++ + K
Sbjct: 212 RILTIQEARKLLPVHQYKDELLQEIKKNQVLIIMGETGSGKTTQLPQYLVEDGFTDQGKL 271
Query: 125 AIAVTQPRRVAAINLATRVAQEHGCRIGHEVGYSVRFDNKSHKTRTKLKYLTDGMLIREL 184
IA+TQPRRVAA ++A RVA E +G EVGY +RF++K+ +T LKY+TDGML+RE
Sbjct: 272 QIAITQPRRVAATSVAARVADEMNVVLGKEVGYQIRFEDKTTPNKTVLKYMTDGMLLREF 331
Query: 185 MLDKNLSNYKCIIIDEAHERTILTDLILGFLKELQLTKRKDLKVIVMSATLQADLFSKFF 244
+ D LS Y CI+IDEAHERT+ TD+++G LK++ L +R LK+++ SAT+ A FS+FF
Sbjct: 332 LTDSKLSKYSCIMIDEAHERTLATDILIGLLKDI-LPQRPTLKLLISSATMNAKKFSEFF 390
Query: 245 SNAPILFVEGRKFKVDRYYLPRPCEDIVDSVVRCSVQLNSSETT-GDILCFLPGQEEIDK 303
N PI V GR++ VD +Y +P + + + + Q++++++ GDIL FL GQEEI++
Sbjct: 391 DNCPIFNVPGRRYPVDIHYTLQPEANYIHAAITTIFQIHTTQSLPGDILVFLTGQEEIER 450
Query: 304 AVAILNKIIPYLDESVPRITAYPLYAALPPKDQAKVFEPLKGFKRKIVLATNIAETSVTI 363
L +I+ L ++ P+YA LP + Q K+F+P RK+VLATNIAETS+TI
Sbjct: 451 TKTKLEEIMSKLGSRTKQMIITPIYANLPQEQQLKIFQPTPENCRKVVLATNIAETSLTI 510
Query: 364 PGVKYVIDCGLRKVKVWRHQLGLATLLTVPVSKASVAQRAGRAGRESSGKCFRLFTEADY 423
G++YVID G K + G+ LLTVP S+ASV QRAGRAGR GKCFR+FT+ Y
Sbjct: 511 DGIRYVIDPGFVKENSYVPSTGMTQLLTVPCSRASVDQRAGRAGRVGPGKCFRIFTKWSY 570
Query: 424 -KQLPKQSESEITRCEITSPILMLKQYGVQDIVNWSWLEHPGKEAIISGLKELYELGALN 482
+L + EITR +++ +L+L GV D++ + ++ P + L+ LY LGALN
Sbjct: 571 LHELELMPKPEITRTNLSNTVLLLLSLGVTDLIKFPLMDKPSIPTLRKSLENLYILGALN 630
Query: 483 EQGRVTDRGRKMALLPLAPHLSNVL----IHAQETQVLPYVIDIVSCL-SVENLVLNPLP 537
+G +T G+ M P P + VL H Q VL + IVS L +L +
Sbjct: 631 SKGTITRLGKMMCEFPCEPEFAKVLYTAATHEQCQGVLEECLTIVSMLHETPSLFIG--- 687
Query: 538 EERDEVNERRRALCTLGSKHGDLIMLKELFDMYQSLQSNSEKQEWCKQLCVSQRGFKNVI 597
+R A L D I+ E+F+ + +++ + WC+ + + V
Sbjct: 688 ------QKRDAAASVLSEVESDHILYLEIFNQW---RNSKFSRSWCQDHKIQFKTMLRVR 738
Query: 598 KVREQLTGYMKRLYNEPVEIKTKQDTLQPEEDIATNLLQPPDIAGVLKCFLYGFVKNTAI 657
+R QL +E V + K D + + + A + +CF+ GF N
Sbjct: 739 NIRNQLF-----RCSEKVGLVEKNDQARMKIGNIAGYIN----ARITRCFISGFPMNIVQ 789
Query: 658 GMPD--KSFRTTPTGEPISIHPSSMLFMNSGDEI-GPCPAILYIEHVFTTKGYARSVSRI 714
P ++ + G +S+HP+S+LF+N ++ P +LY + + T+K + R I
Sbjct: 790 LGPTGYQTMGRSSGGLNVSVHPTSILFVNHKEKAQRPSKYVLYQQLMLTSKEFIRDCLVI 849
Query: 715 -ELAWLQEIASGVLK 728
+ WL ++ + K
Sbjct: 850 PKEEWLIDMVPQIFK 864
>7304234 [A] KOG0925 mRNA splicing factor ATP-dependent RNA helicase
Length = 729
Score = 404 bits (1037), Expect = e-112
Identities = 240/673 (35%), Positives = 377/673 (55%), Gaps = 39/673 (5%)
Query: 55 LDHVSNKELKTRALRLLKGRESLPVFQNKEKIVSHIKANPVTILIGETGSGKSTQIPQFL 114
++ ++N R L K R +LPVF+ + + + + +L+GETGSGK+TQIPQ+
Sbjct: 50 MNPLTNTPYSQRYQNLYKKRIALPVFEYQADFMRLLSLHQCIVLVGETGSGKTTQIPQWC 109
Query: 115 MDEISPMHKGAIAVTQPRRVAAINLATRVAQEHGCRIGHEVGYSVRFDNKSHKTRTKLKY 174
+D + ++ TQPRRVAA+++A RV++E ++G EVGYS+RF++ S +T LKY
Sbjct: 110 VDFAVSKGRKGVSCTQPRRVAAMSVAQRVSEEMDVKLGEEVGYSIRFEDCS-TAKTLLKY 168
Query: 175 LTDGMLIRELMLDKNLSNYKCIIIDEAHERTILTDLILGFLKELQLTKRKDLKVIVMSAT 234
+TDGML+RE M D L Y+ I++DEAHERT+ TD+++G LKE+ + +R DLK++VMSAT
Sbjct: 169 MTDGMLLREAMSDPMLDQYQVILLDEAHERTLATDILMGVLKEV-IRQRSDLKLVVMSAT 227
Query: 235 LQADLFSKFFSNAPILFVEGRKFKVDRYYLPRPCEDIVDSVVRCSVQLNS-SETTGDILC 293
L A F ++F NAP++ V GR V+ +Y P P D +++ +R +Q++ E GDIL
Sbjct: 228 LDAGKFQQYFDNAPLMKVPGRTHPVEIFYTPEPERDYLEAAIRTVIQIHMCEEIEGDILM 287
Query: 294 FLPGQEEIDKAVAILNKIIPYLDESVPRITAYPLYAALPPKDQAKVFEPLK------GFK 347
FL GQEEI++A + + I L + + PLY+ LPP Q ++FEP
Sbjct: 288 FLTGQEEIEEACKRIKREIDNLGSEIGELKCIPLYSTLPPNLQQRIFEPAPPPNANGAIG 347
Query: 348 RKIVLATNIAETSVTIPGVKYVIDCGLRKVKVWRHQLGLATLLTVPVSKASVAQRAGRAG 407
RK+V++TNIAETS+TI GV +VID G K KV+ ++ + +LL P+SKAS QR+GRAG
Sbjct: 348 RKVVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVSPISKASAQQRSGRAG 407
Query: 408 RESSGKCFRLFTEADYK-QLPKQSESEITRCEITSPILMLKQYGVQDIVNWSWLEHPGKE 466
R GKCFRL+TE +K ++ + EI R + + +L LK+ G+ D+V++ +++ P E
Sbjct: 408 RTRPGKCFRLYTEKAFKNEMQDNTYPEILRSNLGTVVLQLKKLGIDDLVHFDFMDPPAPE 467
Query: 467 AIISGLKELYELGALNEQGRVTDRGRKMALLPLAPHLSNVLIHAQETQVLPYVIDIVSCL 526
++ L+ L L AL++ G +TD G M+ PL P L+ +LI + + ++ I + L
Sbjct: 468 TLMRALELLNYLAALDDDGNLTDLGAVMSEFPLDPQLAKMLIASCQHNCSNEILSITAML 527
Query: 527 SVENLVLNPLPEERDEVNERRRALCTLGSKHGDLIMLKELFDMYQSLQSNSEKQEWCKQL 586
SV + P E + +E + + H L ++Y + + +SE WC +
Sbjct: 528 SVPQCFVRP-NEAKKAADEAKMRFAHIDGDH------LTLLNVYHAFKQSSEDPNWCYEN 580
Query: 587 CVSQRGFKNVIKVREQLTGYMKRLYNEPVEIKTKQDTLQPEEDIATNLLQPPDIAGVLKC 646
++ R K+ VR+QL M R + T +D N + K
Sbjct: 581 FINFRSLKSADNVRQQLARIMDRFN------LRRTSTEFTSKDYYVN---------IRKA 625
Query: 647 FLYGFVKNTAIGMPDKSFRTTPTGEPISIHPSSMLFMNSGDEIGPCPAILYIEHVFTTKG 706
+ GF A + T + + +HPS+ L ++Y E V TTK
Sbjct: 626 LVQGFFMQVAHLERTGYYLTIKDNQNVQLHPSTCLDHKP-------DWVIYNEFVLTTKN 678
Query: 707 YARSVSRIELAWL 719
Y R+V+ ++ WL
Sbjct: 679 YIRTVTDVKPEWL 691
>Hs4557517 [A] KOG0925 mRNA splicing factor ATP-dependent RNA helicase
Length = 813
Score = 399 bits (1025), Expect = e-111
Identities = 250/681 (36%), Positives = 377/681 (54%), Gaps = 41/681 (6%)
Query: 53 EALDHVSNKELKTRALRLLKGRESLPVFQNKEKIVSHIKANPVTILIGETGSGKSTQIPQ 112
+ ++ +N R +LK R LPV++ K++ + + +L+GETGSGK+TQIP
Sbjct: 113 QCINPFTNLPHTPRYYDILKKRLQLPVWEYKDRFTDILGRHQSFVLVGETGSGKTTQIPH 172
Query: 113 FLMDEIS--PMHKGAIAVTQPRRVAAINLATRVAQEHGCRIGHEVGYSVRFDNKSHKTRT 170
++ + P K +A TQPRRVAA+++A RVA E +G EVGYS+RF++ S +T
Sbjct: 173 RCVEYMRSLPGPKRGVACTQPRRVAAMSVAQRVADEMDVMLGQEVGYSIRFEDCS-SAKT 231
Query: 171 KLKYLTDGMLIRELMLDKNLSNYKCIIIDEAHERTILTDLILGFLKELQLTKRKDLKVIV 230
Y+TDGML+RE M D L Y II+DEAHERT+ TD+++G LKE+ + +R DLKVIV
Sbjct: 232 FFMYMTDGMLLREAMNDPLLERYGVIILDEAHERTLATDILMGVLKEV-VRQRSDLKVIV 290
Query: 231 MSATLQADLFSKFFSNAPILFVEGRKFKVDRYYLPRPCEDIVDSVVRCSVQLNS-SETTG 289
MSATL A F +F N P+L + GR V+ +Y P P D +++ +R +Q++ E G
Sbjct: 291 MSATLDAGKFQIYFDNCPLLTIPGRTHPVEIFYTPEPERDYLEAAIRTVIQIHMCEEEEG 350
Query: 290 DILCFLPGQEEIDKAVAILNKIIPYLDESVPRITAYPLYAALPPKDQAKVFEPLKGFK-- 347
D+L FL GQEEID+A + + + L V I PLY+ LPP+ Q ++FEP K
Sbjct: 351 DLLLFLTGQEEIDEACKRIKREVDDLGPEVGDIKIIPLYSTLPPQQQQRIFEPPPPKKQN 410
Query: 348 ----RKIVLATNIAETSVTIPGVKYVIDCGLRKVKVWRHQLGLATLLTVPVSKASVAQRA 403
RK+V++TNIAETS+TI GV +VID G K KV+ ++ + +LL +SKAS QRA
Sbjct: 411 GAIGRKVVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVTAISKASAQQRA 470
Query: 404 GRAGRESSGKCFRLFTEADYK-QLPKQSESEITRCEITSPILMLKQYGVQDIVNWSWLEH 462
GRAGR GKCFRL+TE YK ++ + EI R + S +L LK+ G+ D+V++ +++
Sbjct: 471 GRAGRTRPGKCFRLYTEKAYKTEMQDNTYPEILRSNLGSVVLQLKKLGIDDLVHFDFMDP 530
Query: 463 PGKEAIISGLKELYELGALNEQGRVTDRGRKMALLPLAPHLSNVLIHAQETQVLPYVIDI 522
P E ++ L+ L L ALN+ G +T+ G MA PL P L+ ++I + + V+ I
Sbjct: 531 PAPETLMRALELLNYLAALNDDGDLTELGSMMAEFPLDPQLAKMVIASCDYNCSNEVLSI 590
Query: 523 VSCLSVENLVLNPLPEERDEVNERRRALCTLGSKHGDLIMLKELFDMYQSLQSNSEKQEW 582
+ LSV + P E + +E + + H L ++Y + + N E +W
Sbjct: 591 TAMLSVPQCFVRP-TEAKKAADEAKMRFAHIDGDH------LTLLNVYHAFKQNHESVQW 643
Query: 583 CKQLCVSQRGFKNVIKVREQLTGYMKRLYNEPVEIKTKQDTLQPEEDIATNLLQPPDIAG 642
C ++ R + VR+QL+ M R +N P ++ T D N
Sbjct: 644 CYDNFINYRSLMSADNVRQQLSRIMDR-FNLP-----RRSTDFTSRDYYIN--------- 688
Query: 643 VLKCFLYGFVKNTAIGMPDKSFRTTPTGEPISIHPSSMLFMNSGDEIGPCPAILYIEHVF 702
+ K + G+ A + T + + +HPS++L +LY E V
Sbjct: 689 IRKALVTGYFMQVAHLERTGHYLTVKDNQVVQLHPSTVLDHKP-------EWVLYNEFVL 741
Query: 703 TTKGYARSVSRIELAWLQEIA 723
TTK Y R+ + I+ WL +IA
Sbjct: 742 TTKNYIRTCTDIKPEWLVKIA 762
>YKR086w [A] KOG0924 mRNA splicing factor ATP-dependent RNA helicase
Length = 1071
Score = 398 bits (1023), Expect = e-110
Identities = 248/662 (37%), Positives = 382/662 (57%), Gaps = 45/662 (6%)
Query: 74 RESLPVFQNKEKIVSHIKANPVTILIGETGSGKSTQIPQFLMDEISPMHKG-AIAVTQPR 132
+E LPVF+ + +++S I+ N V ++IGETGSGK+TQ+ Q+L +E +G +I VTQPR
Sbjct: 347 KEQLPVFRCRSQLLSLIRENQVVVIIGETGSGKTTQLAQYLYEEGYANDRGKSIVVTQPR 406
Query: 133 RVAAINLATRVAQEHGCRIGHEVGYSVRFDNKSHKTRTKLKYLTDGMLIRELMLDKNLSN 192
RVAAI++A RVA E +G EVGYS+RF++ + TKLK++TDG+L+RE +LD L
Sbjct: 407 RVAAISVAKRVAMEMQVPLGKEVGYSIRFEDVTDSECTKLKFVTDGILLRETLLDDTLDK 466
Query: 193 YKCIIIDEAHERTILTDLILGFLKELQLTKRKDLKVIVMSATLQADLFSKFFSNAPILFV 252
Y C+IIDEAHER++ TD++LGF K L L +R+DLK+I+ SAT+ A FS FF NAP +
Sbjct: 467 YSCVIIDEAHERSLNTDILLGFFKIL-LARRRDLKLIITSATMNAKKFSAFFGNAPQFTI 525
Query: 253 EGRKFKVDRYYLPRPCEDIVDSVVRCSVQLNSSE--TTGDILCFLPGQEEID-------- 302
GR F V Y P +D V++ V +V+++ + ++GDIL F+ GQE+I+
Sbjct: 526 PGRTFPVQTIYTSNPVQDYVEAAVSQAVKIHLANDCSSGDILIFMTGQEDIETTFDTLQE 585
Query: 303 KAVAILNKIIPYLD-ESVPRITAYPLYAALPPKDQAKVFEPLKGFKRKIVLATNIAETSV 361
K + + +K + E + I P+Y+ALP Q K+F+ L G KRKI++ATNIAETS+
Sbjct: 586 KFLQVYSKKFGTANFEEINDIEILPIYSALPADLQFKIFQDLHGTKRKIIIATNIAETSL 645
Query: 362 TIPGVKYVIDCGLRKVKVWRHQLGLATLLTVPVSKASVAQRAGRAGRESSGKCFRLFTEA 421
TI G++YVIDCG K+KV+ ++GL +L+ P+SKA+ QR+GRAGR + G +RL+TE
Sbjct: 646 TIKGIRYVIDCGYSKLKVYNPKIGLDSLVITPISKANADQRSGRAGRTAPGTAYRLYTED 705
Query: 422 DYKQ-LPKQSESEITRCEITSPILMLKQYGVQD-IVNWSWLEHPGKEAIISGLKELYELG 479
+K+ + Q+ EI R +++ +L+LK V D + + +++ P + +S L EL+ +G
Sbjct: 706 TFKEDMYLQTIPEIQRTNLSNTLLLLKSLDVTDELSKFPFIDKPPLQTFLSSLYELWFIG 765
Query: 480 ALNEQGRVTDRGRKMALLPLAPHLSNVLIHAQETQVLPYVIDIVSCLSVENLVLNPLPEE 539
A++ G++T G +MA PL P LS +L+ A ++ IVS LSV + P E
Sbjct: 766 AIDTSGQLTPLGLQMAKFPLQPSLSKILLIAVRNGCSDEMLTIVSMLSVPQVFYRP-KER 824
Query: 540 RDEVNERRRALCTLGSKHGDLIMLKELFDMYQSLQSNSEKQEWCKQLCVSQRGFKNVIKV 599
+ E + R S H L ++++ ++N+ WC + V + +
Sbjct: 825 QKEADIARNKFFIAKSDH------LTLLNVFEQWRANNFSSHWCNKHFVQYKSLVRARDI 878
Query: 600 REQLTGYMKRLYNEPVEIKTKQDTLQPEEDIATNLLQPPDIAGVLKCFLYGFVKNTAIGM 659
R+QL +K PV K + DI + KC GF A
Sbjct: 879 RDQLLTILKS-QKIPVISSGK------DWDI------------IKKCICSGFAHQAAKIT 919
Query: 660 PDKSFRTTPTGEPISIHPSSMLFMNSGDEIGPCPAILYIEHVFTTKGYARSVSRIELAWL 719
+++ TG + +HP+S L GD P ++Y E + T+K Y V+ ++ WL
Sbjct: 920 GLRNYVHLKTGVSVQLHPTSALH-GLGD---LPPYVVYHELLMTSKEYICCVTSVDPFWL 975
Query: 720 QE 721
E
Sbjct: 976 ME 977
>CE01027 [A] KOG0924 mRNA splicing factor ATP-dependent RNA helicase
Length = 1131
Score = 398 bits (1022), Expect = e-110
Identities = 241/652 (36%), Positives = 379/652 (57%), Gaps = 38/652 (5%)
Query: 74 RESLPVFQNKEKIVSHIKANPVTILIGETGSGKSTQIPQFLMDEISPMHKGAIAVTQPRR 133
RE LPVF ++K+++ I+ N V I++GETGSGK+TQ+ Q+L+++ G I TQPRR
Sbjct: 438 REYLPVFACRQKMMNVIRENNVVIIVGETGSGKTTQLAQYLLED-GFGDSGLIGCTQPRR 496
Query: 134 VAAINLATRVAQEHGCRIGHEVGYSVRFDNKSHKTRTKLKYLTDGMLIRELMLDKNLSNY 193
VAA+++A RVA E G +G +VGY++RF++ + + +T +KY+TDG+L+RE + D +L Y
Sbjct: 497 VAAMSVARRVADEMGVDLGQDVGYAIRFEDCTSE-KTIIKYMTDGILLRECLGDGSLDQY 555
Query: 194 KCIIIDEAHERTILTDLILGFLKELQLTKRKDLKVIVMSATLQADLFSKFFS-NAPILFV 252
II+DEAHER++ TD++ G L+E+ + KR DLK+IV SAT+ AD F+ FF N P +
Sbjct: 556 SAIIMDEAHERSLNTDVLFGLLREV-IAKRADLKLIVTSATMDADKFADFFGGNCPTFTI 614
Query: 253 EGRKFKVDRYYLPRPCEDIVDSVVRCSVQLNSSETTGDILCFLPGQEEIDKAVAILNKII 312
GR F V+ ++ P ED VD+ V+ +V ++ GDIL F+PGQE+I+ ++ + +
Sbjct: 615 PGRTFPVELFHARTPVEDYVDAAVKQAVTIHLGGMDGDILIFMPGQEDIECTCEMIKEKL 674
Query: 313 PYLDESVPRITAYPLYAALPPKDQAKVFEPLKGFKRKIVLATNIAETSVTIPGVKYVIDC 372
LDE+ P + P+Y+ LP QAK+F+ G RK ++ATNIAETS+T+ G+ +VID
Sbjct: 675 GELDEAPP-LAVLPIYSQLPSDLQAKIFQRAPGGMRKAIVATNIAETSLTVDGILFVIDP 733
Query: 373 GLRKVKVWRHQLGLATLLTVPVSKASVAQRAGRAGRESSGKCFRLFTEADYK-QLPKQSE 431
G K+KV+ ++G+ L PVS+AS QR GRAGR G+C+RL+TE +K +L K +
Sbjct: 734 GFCKMKVYNPRIGMDALSIFPVSQASANQRTGRAGRTGPGQCYRLYTERQFKDELLKSTV 793
Query: 432 SEITRCEITSPILMLKQYGVQDIVNWSWLEHPGKEAIISGLKELYELGALNEQGRVTDRG 491
EI R + + +L+LK GV D++ + +++ P ++ +++ + +L+ LGAL+ G++T G
Sbjct: 794 PEIQRTNLANVVLLLKSLGVDDLLKFHFMDAPPQDNMLNSMYQLWTLGALDNTGQLTPMG 853
Query: 492 RKMALLPLAPHLSNVLIHAQETQVLPYVIDIVSCLSVENLVLNPLPEERDEVNERRRALC 551
RKM PL P LS +LI + E V+ IVS LSV + P E +E + ++
Sbjct: 854 RKMVEFPLDPTLSKMLIMSAEMGCSDEVLTIVSMLSVPAIFFRPKGRE-EEADAKKEKFQ 912
Query: 552 TLGSKHGDLIMLKELFDMYQSLQSNSEKQEWCKQLCVSQRGFKNVIKVREQLTGYMKRLY 611
S H ++Y +++ +WC + + K V +VR QL M+
Sbjct: 913 VPESDH------LTFLNVYIQWRTHKYSAKWCADNYLHVKALKKVREVRAQLKEIMQ--- 963
Query: 612 NEPVEIKTKQDTLQPEEDIATNLLQPPDIAGVLKCFLYGFVKNTAIGMPDKSFRTTPTGE 671
++K + E DI V KC + N A + TG
Sbjct: 964 ----DLKLPLISNGSEWDI------------VRKCICSAYFHNAARLKGIGEYVNVRTGI 1007
Query: 672 PISIHPSSMLFMNSGDEIGPCP-AILYIEHVFTTKGYARSVSRIELAWLQEI 722
P +HP+S LF +G P ++Y E + T K Y + V+ ++ WL E+
Sbjct: 1008 PCFLHPTSALF-----GMGFMPDYVVYHELIMTAKEYMQCVTAVDAIWLAEL 1054
>At1g26370 [A] KOG0922 DEAH-box RNA helicase
Length = 710
Score = 391 bits (1005), Expect = e-108
Identities = 239/705 (33%), Positives = 386/705 (53%), Gaps = 82/705 (11%)
Query: 69 RLLKGRESLPVFQNKEKIVSHIKANPVTILIGETGSGKSTQIPQFLMDEISPMHKGAIAV 128
++ + R SLP+ ++++V ++ N + I++GETGSGK+TQ+PQFL + I +
Sbjct: 30 KIAEHRRSLPIASVEKRLVEEVQKNDILIIVGETGSGKTTQLPQFLYNAGFCREGKMIGI 89
Query: 129 TQPRRVAAINLATRVAQEHGCRIGHEVGYSVRFDNKSHKTRTKLKYLTDGMLIRELMLDK 188
TQPRR+AA+ +A RVA+E ++G +VGYS+RFD+ + + T+LKY+TDG+L+RE +LD
Sbjct: 90 TQPRRIAAVTVAKRVAEECEVQLGQKVGYSIRFDDTTSGS-TRLKYMTDGLLLREALLDP 148
Query: 189 NLSNYKCIIIDEAHERTILTDLILGFLKELQLT--------------------------- 221
+LS Y II+DEAH+R++ TD++L LK++Q T
Sbjct: 149 HLSRYSVIIVDEAHDRSVHTDVLLALLKKIQRTRSQPVSEKTEFGNVASQVQTTTRDANG 208
Query: 222 -------------KRKDLKVIVMSATLQADLFSKFFSNAPILFVEGRKFKVDRYYLPRPC 268
K LK+I+MSA+L A +FS++F A + V+GR+F VD Y P
Sbjct: 209 PQQNGVLKGYQGRKLSPLKLIIMSASLDARVFSEYFGGAKAVHVQGRQFPVDILYTVHPE 268
Query: 269 EDIVDSVVRCSVQLNSSETTGDILCFLPGQEEIDKAVAILNKIIPYLDESVPRITAYPLY 328
D VD+ + Q E GDIL FL GQ+EI+ ++ + + + E ++ ++
Sbjct: 269 SDYVDATLVTIFQ----EKPGDILVFLTGQDEIESVERLVQERLQNIPEDKRKLLPLAIF 324
Query: 329 AALPPKDQAKVFEPLKGFKRKIVLATNIAETSVTIPGVKYVIDCGLRKVKVWRHQLGLAT 388
+ALP + Q KVF P RK++LATNIAETS+TIPG++YVID G K + + G+ +
Sbjct: 325 SALPSEQQMKVFAPAPTGFRKVILATNIAETSITIPGIRYVIDPGFVKARSYDPSKGMES 384
Query: 389 LLTVPVSKASVAQRAGRAGRESSGKCFRLFTEADYKQLPKQSESEITRCEITSPILMLKQ 448
L VP SKA QR+GRAGRE GK FRL+ E ++++L ++ EI RC +++ IL LK
Sbjct: 385 LDVVPASKAQTLQRSGRAGREGPGKSFRLYPEREFEKLEDSTKPEIKRCNLSNIILQLKA 444
Query: 449 YGVQDIVNWSWLEHPGKEAIISGLKELYELGALNEQGRVTDR-GRKMALLPLAPHLSNVL 507
G+ DIV + +++ P + AII L EL+ LGAL + G++ + G +M+ LPL P S L
Sbjct: 445 LGIDDIVGFDFIDKPSRGAIIKALAELHSLGALADDGKLENPVGYQMSRLPLEPVYSKAL 504
Query: 508 IHAQETQVLPYVIDIVSCLSVENLVLNPLPEERDEVNERRRALCTLGSKHGDLIMLKELF 567
I A + L ++ V+ LSVE++ +P E+R+E + ++ H + +
Sbjct: 505 ILANQFNCLEEMLITVAVLSVESIFYDPR-EKREEARTSKNHFASVEGDHLTYLSVYRES 563
Query: 568 DMYQSLQ------SNSEK--QEWCKQLCVSQRGFKNVIKVREQLTGYMKRLYNEPVEIKT 619
D + + +N +K ++WCK+ V+ R K+ + Q+ ++
Sbjct: 564 DEFLEKRKAAGSGNNIDKIMKKWCKENYVNSRSLKHARDIYRQIREHV------------ 611
Query: 620 KQDTLQPEEDIATNLLQ-PPDIAGVLKCFLYGFVKNTAIGMPDKSFRTTPTGEPISIHPS 678
E I N+ D+ +C F A D ++R +GE + IHP+
Sbjct: 612 --------EQIGFNVSSCGNDMLAFRRCLAASFFLKAAQRQLDGTYRALESGEVVHIHPT 663
Query: 679 SMLFMNSGDEIGPCPAILYIEHVFTTKGYARSVSRIELAWLQEIA 723
S+LF + +++ E + T+K Y ++++ I+ WL E+A
Sbjct: 664 SVLFRAKPE------CVIFNELMQTSKKYIKNLTIIDSLWLSELA 702
>Hs17999539 [A] KOG0924 mRNA splicing factor ATP-dependent RNA helicase
Length = 1227
Score = 388 bits (997), Expect = e-107
Identities = 235/657 (35%), Positives = 383/657 (57%), Gaps = 41/657 (6%)
Query: 70 LLKGRESLPVFQNKEKIVSHIKANPVTILIGETGSGKSTQIPQFLMDEISPMHKGAIAVT 129
+L+ R+ LP+F ++++++ I+ N + I++GETGSGK+TQ+ Q+L ++ G I T
Sbjct: 525 ILEQRQYLPIFAVQQELLTIIRDNSIVIVVGETGSGKTTQLTQYLHED-GYTDYGMIGCT 583
Query: 130 QPRRVAAINLATRVAQEHGCRIGHEVGYSVRFDNKSHKTRTKLKYLTDGMLIRELMLDKN 189
QPRRVAA+++A RV++E G +G EVGY++RF++ + + T +KY+TDG+L+RE + + +
Sbjct: 584 QPRRVAAMSVAKRVSEEMGGNLGEEVGYAIRFEDCTSEN-TLIKYMTDGILLRESLREAD 642
Query: 190 LSNYKCIIIDEAHERTILTDLILGFLKELQLTKRKDLKVIVMSATLQADLFSKFFSNAPI 249
L +Y II+DEAHER++ TD++ G L+E+ + +R DLK+IV SAT+ A+ F+ FF N PI
Sbjct: 643 LDHYSAIIMDEAHERSLNTDVLFGLLREV-VARRSDLKLIVTSATMDAEKFAAFFGNVPI 701
Query: 250 LFVEGRKFKVDRYYLPRPCEDIVDSVVRCSVQLNSSETTGDILCFLPGQEEIDKAVAILN 309
+ GR F VD + P ED V++ V+ S+Q++ S GDIL F+PGQE+I+ +
Sbjct: 702 FHIPGRTFPVDILFSKTPQEDYVEAAVKQSLQVHLSGAPGDILIFMPGQEDIE---VTSD 758
Query: 310 KIIPYLDE--SVPRITAYPLYAALPPKDQAKVFEPLKGFKRKIVLATNIAETSVTIPGVK 367
+I+ +L+E + P + P+Y+ LP QAK+F+ RK ++ATNIAETS+T+ G+
Sbjct: 759 QIVEHLEELENAPALAVLPIYSQLPSDLQAKIFQKAPDGVRKCIVATNIAETSLTVDGIM 818
Query: 368 YVIDCGLRKVKVWRHQLGLATLLTVPVSKASVAQRAGRAGRESSGKCFRLFTEADYK-QL 426
+VID G K+KV+ ++G+ L P+S+A+ QR+GRAGR G+CFRL+T++ YK +L
Sbjct: 819 FVIDSGYCKLKVFNPRIGMDALQIYPISQANANQRSGRAGRTGPGQCFRLYTQSAYKNEL 878
Query: 427 PKQSESEITRCEITSPILMLKQYGVQDIVNWSWLEHPGKEAIISGLKELYELGALNEQGR 486
+ EI R + + +L+LK GVQD++ + +++ P ++ +++ + +L+ LGAL+ G
Sbjct: 879 LTTTVPEIQRTNLANVVLLLKSLGVQDLLQFHFMDPPPEDNMLNSMYQLWILGALDNTGG 938
Query: 487 VTDRGRKMALLPLAPHLSNVLIHAQETQVLPYVIDIVSCLSVENLVLNPLPEERDEVNER 546
+T GR M PL P LS +LI + + ++ IVS LSV + P E +E ++
Sbjct: 939 LTSTGRLMVEFPLDPALSKMLIVSCDMGCSSEILLIVSMLSVPAIFYRPKGRE-EESDQI 997
Query: 547 RRALCTLGSKHGDLIMLKELFDMYQSLQSNSEKQEWCKQLCVSQRGFKNVIKVREQLTGY 606
R S H ++Y ++N+ WC + + + V +VR QL
Sbjct: 998 REKFAVPESDH------LTYLNVYLQWKNNNYSTIWCNDHFIHAKAMRKVREVRAQLKDI 1051
Query: 607 MKRLYNEPVEIKTKQDTLQPEEDIATNLLQPPDIAGVLKCFLYGFVKNTAIGMPDKSFRT 666
M V+ + + + DI V KC + A +
Sbjct: 1052 M-------VQQRMSLASCGTDWDI------------VRKCICAAYFHQAAKLKGIGEYVN 1092
Query: 667 TPTGEPISIHPSSMLFMNSGDEIGPCP-AILYIEHVFTTKGYARSVSRIELAWLQEI 722
TG P +HP+S LF +G P I+Y E V TTK Y + V+ ++ WL E+
Sbjct: 1093 IRTGMPCHLHPTSSLF-----GMGYTPDYIVYHELVMTTKEYMQCVTAVDGEWLAEL 1144
>7295673 [A] KOG0922 DEAH-box RNA helicase
Length = 671
Score = 383 bits (984), Expect = e-106
Identities = 246/665 (36%), Positives = 371/665 (54%), Gaps = 48/665 (7%)
Query: 70 LLKGRESLPVFQNKEKIVSHIKANPVTILIGETGSGKSTQIPQFLMDEISPMHKGAIAVT 129
L++ RE LP+ Q +++I+ ++ + V IL+GETGSGKSTQ+PQ+L E KG I +T
Sbjct: 40 LMEQRERLPIRQYRDQILYCLEKHQVVILVGETGSGKSTQVPQYLY-EWGWHTKGLIGIT 98
Query: 130 QPRRVAAINLATRVAQEHGCRIGHEVGYSVRFDNKSHKTRTKLKYLTDGMLIRELMLDKN 189
+PRRV+ + LA RVAQE G +G VGY VRF +S + TK+K++T+G+L+RE++ D
Sbjct: 99 EPRRVSTVTLANRVAQERGELVGDTVGYVVRF-LESMSSCTKIKFMTEGILLREVLADPL 157
Query: 190 LSNYKCIIIDEAHERTILTDLILGFLKELQLTKRKDLKVIVMSATLQADLFSKFFS---- 245
L+ Y II+DEAHER +LTD+ILG LK++ L KR LK+I+ SAT+ A FS+FFS
Sbjct: 158 LTQYGVIIVDEAHERNMLTDMILGLLKKI-LRKRSSLKLIISSATIDASFFSEFFSWPGS 216
Query: 246 --NAPILFVEGRKFKVDRYYLPRPCEDIVDSVVRCSVQLNSSETTGDILCFLPGQEEIDK 303
+ L +EGR V +YL PC D V V +L+ E GDIL FL GQEE+ +
Sbjct: 217 GEVSVKLSIEGRMHPVSNFYLNEPCADYVKETVETVWKLHQKEPPGDILAFLTGQEEVLE 276
Query: 304 AVAILNKIIPYLDESVPRITAYPLYAALPPKDQAKVF-EPLKGFKRKIVLATNIAETSVT 362
A+ +L + I ++ + P+Y ++ DQ VF P KG RK+VLATNIAETS+T
Sbjct: 277 ALDLLREYIASSEQE--NLKVLPMYGSMSSTDQLSVFFTPPKG-TRKVVLATNIAETSIT 333
Query: 363 IPGVKYVIDCGLRKVKVWRHQLGLATLLTVPVSKASVAQRAGRAGRESSGKCFRLFTEAD 422
IPG+ YVIDCG KVK + + +L+ VPVSKAS QRAGRAGR GK +RL+T++D
Sbjct: 334 IPGIVYVIDCGYVKVKWYNPKTCSDSLVIVPVSKASAIQRAGRAGRMRPGKVYRLYTKSD 393
Query: 423 YKQLPKQSESEITRCEITSPILMLKQYGVQDIVNWSWLEHPGKEAIISGLKELYELGALN 482
Y+ L + E+ R E++ IL LK G+ +I+ + + P + ++S L+ L+ L A++
Sbjct: 394 YEALAPRQPPEMRRSELSGAILQLKALGIGNILRFDFPSPPPAQNLLSALESLFALDAID 453
Query: 483 EQGRVTDR-GRKMALLPLAPHLSNVLIHAQETQVLPYVIDIVSCLSVENLVLNP---LPE 538
EQG +T G +A LP + LS +L + + +I I++ L V+++ P + +
Sbjct: 454 EQGNLTKPVGYLLAELPFSAMLSKMLYVSGQMGCSEEIITIIALLQVQSIFSRPASAVAQ 513
Query: 539 ERDEVNERRRALCTLGSKHGDLIMLKELFDMYQSLQSNSEKQEWCKQLCVSQRGFKNVIK 598
+ + R+ + GD I + + Y +E+C Q + R K
Sbjct: 514 QSGRIAHRKFEVA-----EGDFI---TMLNAYTGFVEEGMTKEFCGQYFLIYRNLKRAHS 565
Query: 599 VREQLTGYMKRLYNEPVEIKTKQDTLQPEEDIATNLLQPPDIAGVLKCFLYGFVKNTAIG 658
+REQL ++ Y P+ D+ + KC GF A
Sbjct: 566 LREQLITVARKKYGIPI------------------FSCKGDVEKLCKCITAGFFTQVAYL 607
Query: 659 MPDKSFRTTPTGEPISIHPSSMLFMNSGDEIGPCPAILYIEHVFTTKGYARSVSRIELAW 718
+R +G ++IHP+S L+ + ++Y E + TTK + V+ I+ W
Sbjct: 608 HHSGVYRQISSGTELAIHPNSTLY-----TLPQAQYVVYGELLQTTKLFMNYVTVIKREW 662
Query: 719 LQEIA 723
L E+A
Sbjct: 663 LTELA 667
>At5g13010 [A] KOG0924 mRNA splicing factor ATP-dependent RNA helicase
Length = 1226
Score = 379 bits (972), Expect = e-104
Identities = 226/655 (34%), Positives = 371/655 (56%), Gaps = 44/655 (6%)
Query: 74 RESLPVFQNKEKIVSHIKANPVTILIGETGSGKSTQIPQFLMDEISPMHKGAIAVTQPRR 133
R+ LP+F +++++ I+ N V +++GETGSGK+TQ+ Q G + TQPRR
Sbjct: 530 RQYLPIFSVRDELLQVIRENQVIVVVGETGSGKTTQLTQD-----GYTINGIVGCTQPRR 584
Query: 134 VAAINLATRVAQEHGCRIGHEVGYSVRFDNKSHKTRTKLKYLTDGMLIRELMLDKNLSNY 193
VAA+++A RV++E +G ++GY++RF++ + T +KY+TDG+L+RE + D +L Y
Sbjct: 585 VAAMSVAKRVSEEMETELGDKIGYAIRFEDVTGPN-TVIKYMTDGVLLRETLKDSDLDKY 643
Query: 194 KCIIIDEAHERTILTDLILGFLKELQLTKRKDLKVIVMSATLQADLFSKFFSNAPILFVE 253
+ +++DEAHER++ TD++ G LK++ + +R+D K+IV SATL A FS FF + PI +
Sbjct: 644 RVVVMDEAHERSLNTDVLFGILKKV-VARRRDFKLIVTSATLNAQKFSNFFGSVPIFNIP 702
Query: 254 GRKFKVDRYYLPRPCEDIVDSVVRCSVQLNSSETTGDILCFLPGQEEIDKAVAILNKIIP 313
GR F V+ Y PCED V++ V+ ++ ++ + GDIL F+ GQ+EI+ A L + +
Sbjct: 703 GRTFPVNILYSKTPCEDYVEAAVKQAMTIHITSPPGDILIFMTGQDEIEAACFSLKERME 762
Query: 314 YLDESVPR----ITAYPLYAALPPKDQAKVFEPLKGFKRKIVLATNIAETSVTIPGVKYV 369
L S R + P+Y+ LP QAK+F+ + RK ++ATNIAETS+T+ G+ YV
Sbjct: 763 QLVSSSSREITNLLILPIYSQLPADLQAKIFQKPEDGARKCIVATNIAETSLTVDGIYYV 822
Query: 370 IDCGLRKVKVWRHQLGLATLLTVPVSKASVAQRAGRAGRESSGKCFRLFTEADY-KQLPK 428
ID G K+KV+ ++G+ L P+S+A+ QRAGRAGR G C+RL+TE+ Y ++
Sbjct: 823 IDTGYGKMKVFNPRMGMDALQVFPISRAASDQRAGRAGRTGPGTCYRLYTESAYLNEMLP 882
Query: 429 QSESEITRCEITSPILMLKQYGVQDIVNWSWLEHPGKEAIISGLKELYELGALNEQGRVT 488
EI R + + +L+LK + +++++ +++ P +E I++ + +L+ LGALN G +T
Sbjct: 883 SPVPEIQRTNLGNVVLLLKSLKIDNLLDFDFMDPPPQENILNSMYQLWVLGALNNVGGLT 942
Query: 489 DRGRKMALLPLAPHLSNVLIHAQETQVLPYVIDIVSCLSVENLVLNPLPEERDEVNERRR 548
D G KM PL P L+ +L+ + + V+ IVS LSV ++ P E +E + R
Sbjct: 943 DLGWKMVEFPLDPPLAKMLLMGERLDCIDEVLTIVSMLSVPSVFFRP-KERAEESDAARE 1001
Query: 549 ALCTLGSKHGDLIMLKELFDMYQSLQSNSEKQEWCKQLCVSQRGFKNVIKVREQLTGYMK 608
S H L ++YQ + + + +WC + +G + +VR QL +K
Sbjct: 1002 KFFVPESDH------LTLLNVYQQWKEHDYRGDWCNDHYLQVKGLRKAREVRSQLLDILK 1055
Query: 609 RLYNEPVEIKTKQDTLQPEEDIATNLLQPPDIAGVLKCFLYGFVKNTAIGMPDKSFRTTP 668
+L K + + P+ DI V K + N+A +
Sbjct: 1056 QL-------KIELRSCGPDWDI------------VRKAICSAYFHNSARLKGVGEYVNCR 1096
Query: 669 TGEPISIHPSSMLFMNSGDEIGPCP-AILYIEHVFTTKGYARSVSRIELAWLQEI 722
TG P +HPSS L+ +G P ++Y E + TTK Y + + +E WL E+
Sbjct: 1097 TGMPCHLHPSSALY-----GLGYTPDYVVYHELILTTKEYMQCATSVEPHWLAEL 1146
>Hs21362038 [A] KOG0922 DEAH-box RNA helicase
Length = 779
Score = 376 bits (965), Expect = e-104
Identities = 230/667 (34%), Positives = 366/667 (54%), Gaps = 43/667 (6%)
Query: 76 SLPVFQNKEKIVSHIKANPVTILIGETGSGKSTQIPQFLMDEISPMHKGAIAVTQPRRVA 135
+ P+ + ++KI+ ++ N I+ G TGSGK+TQ+P++L + H G I VTQPR+VA
Sbjct: 52 TFPIQKQRKKIIQAVRDNSFLIVTGNTGSGKTTQLPKYLYEAGFSQH-GMIGVTQPRKVA 110
Query: 136 AINLATRVAQEHGCRIGHEVGYSVRFDNKSHKTRTKLKYLTDGMLIRELMLDKNLSNYKC 195
AI++A RVA+E C +G +VGY VRFD+ S K T +KY+TDG L++ ++ D NL+ +
Sbjct: 111 AISVAQRVAEEMKCTLGSKVGYQVRFDDCSSK-ETAIKYMTDGCLLKHILGDPNLTKFSV 169
Query: 196 IIIDEAHERTILTDLILGFLKELQLTK----RKDLKVIVMSATLQADLFSKFFSNAPILF 251
II+DEAHERT+ TD++ G LK+L K ++ LKV+VMSAT++ S FF N PI
Sbjct: 170 IILDEAHERTLTTDILFGLLKKLFQEKSPNRKEHLKVVVMSATMELAKLSAFFGNCPIFD 229
Query: 252 VEGRKFKVDRYYL----PRPCEDI--VDSVVRCSVQLNSSETTGDILCFLPGQEEIDKAV 305
+ GR + V + PR E+ + ++V+ ++ ++ +E GDIL FL GQ EI+K+
Sbjct: 230 IPGRLYPVREKFCNLIGPRDRENTAYIQAIVKVTMDIHLNEMAGDILVFLTGQFEIEKSC 289
Query: 306 AILNKIIPYLD-------ESVPRITAYPLYAALPPKDQAKVFEPLKGFKRKIVLATNIAE 358
+L ++ +D ++ + P Y ++ Q ++F P RK V++TNI+
Sbjct: 290 ELLFQMAESVDYDYDVQDTTLDGLLILPCYGSMTTDQQRRIFLPPPPGIRKCVISTNISA 349
Query: 359 TSVTIPGVKYVIDCGLRKVKVWRHQLGLATLLTVPVSKASVAQRAGRAGRESSGKCFRLF 418
TS+TI G++YV+D G K +LGL L VP+SK+ QR+GRAGR SSGKCFR++
Sbjct: 350 TSLTIDGIRYVVDGGFVKQLNHNPRLGLDILEVVPISKSEALQRSGRAGRTSSGKCFRIY 409
Query: 419 TEADYKQ-LPKQSESEITRCEITSPILMLKQYGVQDIVNWSWLEHPGKEAIISGLKELYE 477
++ + Q +P EI R +TS +L LK + D++ + +L+ P + I+ LK+LY+
Sbjct: 410 SKDFWNQCMPDHVIPEIKRTSLTSVVLTLKCLAIHDVIRFPYLDPPNERLILEALKQLYQ 469
Query: 478 LGALNEQGRVTDRGRKMALLPLAPHLSNVLIHAQETQVLPYVIDIVSCLSVENLVLNPL- 536
A++ G VT G M PL PHL+ +I A ++ I + LSVEN+ + P+
Sbjct: 470 CDAIDRSGHVTRLGLSMVEFPLPPHLTCAVIKAASLDCEDLLLPIAAMLSVENVFIRPVD 529
Query: 537 PEERDEVNERRRALCTLGSKHGDLIMLKELFDMYQSLQSNSEKQEWCKQLCVSQRGFKNV 596
PE + E +R R L D L +F + +S+ WC++ + R +
Sbjct: 530 PEYQKEAEQRHRELAAKAGGFNDFATLAVIF---EQCKSSGAPASWCQKHWIHWRCLFSA 586
Query: 597 IKVREQLTGYMKRLYNEPVEIKTKQDTLQPEEDIATNLLQPPDIAGVLKCFLYGFVKNTA 656
+V QL +++ L+ + D + P + +C G+ KN A
Sbjct: 587 FRVEAQLRELIRK--------------LKQQSDFPKETFEGPKHEVLRRCLCAGYFKNVA 632
Query: 657 IGMPDKSFRTTP-TGEPISIHPSSMLFMNSGDEIGPCPAILYIEHVFTTKGYARSVSRIE 715
++F T G P+ IHPSS L ++ I++ E + TTK YAR V I
Sbjct: 633 RRSVGRTFCTMDGRGSPVHIHPSSALH----EQETKLEWIIFHEVLVTTKVYARIVCPIR 688
Query: 716 LAWLQEI 722
W++++
Sbjct: 689 YEWVRDL 695
>CE27311 [A] KOG0922 DEAH-box RNA helicase
Length = 732
Score = 373 bits (958), Expect = e-103
Identities = 237/669 (35%), Positives = 365/669 (54%), Gaps = 46/669 (6%)
Query: 67 ALRLLKGRESLPVFQNKEKIVSHIKANPVTILIGETGSGKSTQIPQFLMDEISPMHKGAI 126
+L + + R LP+F+N+ I+ + I++GETG GKSTQ+PQFL++ I
Sbjct: 67 SLNIQQQRIRLPIFKNRGHILYMCERYRTIIIVGETGCGKSTQVPQFLLEAGWAADGRQI 126
Query: 127 AVTQPRRVAAINLATRVAQEHGCRIGHEVGYSVRFDNKSHKTRTKLKYLTDGMLIRELML 186
+TQPRRVA + LATRVA+E C +GH+VGY+VRFD+ S K TK+K++TDG+L+RE++
Sbjct: 127 VITQPRRVAVVTLATRVAEEKDCILGHDVGYTVRFDDVSDKD-TKVKFMTDGLLLREILA 185
Query: 187 DKNLSNYKCIIIDEAHERTILTDLILGFLKELQLTKRKDLKVIVMSATLQADLFSKFFS- 245
D LS Y I+IDEAHER+ TD++LG L+++ + R DL++IV SATL A+LF FF
Sbjct: 186 DPLLSKYSIIMIDEAHERSCNTDILLGLLRKI-IQIRNDLRIIVSSATLDAELFKDFFEM 244
Query: 246 ---------NAPILFVEGRKFKVDRYYLPRPCEDIVDSVVRCSVQLNSSETTGDILCFLP 296
A I+ VEGR V ++ D S V + ++ E GDIL FL
Sbjct: 245 NETGNSDKDTAGIISVEGRTHPVAVHHTKTSVPDYCQSAVDTVINIHKHENPGDILVFLT 304
Query: 297 GQEEIDKAVAILNKIIPYLDESVPRITAYPLYAALPPKDQAKVFEPLKGFKRKIVLATNI 356
GQ+E++ L ++ L ++ R+ P Y ALP ++Q K F+ RK+V+ATNI
Sbjct: 305 GQDEVEDVCEKLRELAGNL-KNCDRLWVVPCYGALPAREQMKAFDSTPHGTRKVVVATNI 363
Query: 357 AETSVTIPGVKYVIDCGLRKVKVWRHQLGLATLLTVPVSKASVAQRAGRAGRESSGKCFR 416
AE S+TIPG+ YVID G K++ G+ TL+ V VSKAS QRAGRAGR GKC+R
Sbjct: 364 AEASITIPGICYVIDTGYVKLRAQHAANGVETLMRVTVSKASAEQRAGRAGRIRPGKCYR 423
Query: 417 LFTEADYKQLPKQSESEITRCEITSPILMLKQYGVQDIVNWSWLEHPGKEAIISGLKELY 476
L+ E+++++ + + EI RC++ S IL LK GVQ++ + +L P A+I+GL+ LY
Sbjct: 424 LYPESEFERFAEGTVPEIQRCQMASTILQLKALGVQNVHRFHYLSPPPSWAMINGLELLY 483
Query: 477 ELGALNEQGRVTD-RGRKMALLPLAPHLSNVLIHAQETQVLPYVIDIVSCLSVENLVLNP 535
LGA++E ++T G +MA PL P S L+ + E ++ IV+ + ++++ + P
Sbjct: 484 ALGAIDETSQLTSPLGLQMAEFPLPPMHSKCLLKSAEFGCSTEMVTIVAMMQIQDVFITP 543
Query: 536 LPEERDEVNERRRALCTLGSKHGDLIMLKELFDMYQSLQSNSEKQEWCKQLCVSQRGFKN 595
+R + + R+ + GD + + +F + N ++WC V+ RG
Sbjct: 544 Y-RQRHQADVIRKKFAV---EEGDHMTMLNVFTKF---VENGRSKKWCSDHFVNYRGLMR 596
Query: 596 VIKVREQLTGYMKRLYNEPVEIKTKQDTLQPEEDIATNLLQPPDIAGVLKCFLYGFVKNT 655
VR QL +KR E V + + + E+I +C + GF
Sbjct: 597 ADNVRSQLVRLLKRFEIEKV---SSRGLINCSENIR-------------QCLVTGFFSQA 640
Query: 656 AIGMPDKSFRTTPTGEPISIHP-SSMLFMNSGDEIGPCPAILYIEHVFTTKGYARSVSRI 714
A + T P +++ SS++F + ++ + R V+ I
Sbjct: 641 AQYHYTGKYMTVKESFPFNMYKGSSIMFKKDYPK--------WVIFTEVMQDSIRDVTVI 692
Query: 715 ELAWLQEIA 723
E WL E+A
Sbjct: 693 EPEWLYELA 701
>At1g27900 [A] KOG0922 DEAH-box RNA helicase
Length = 708
Score = 365 bits (938), Expect = e-100
Identities = 237/681 (34%), Positives = 373/681 (53%), Gaps = 50/681 (7%)
Query: 76 SLPVFQNKEKIVSHIKANPVTILIGETGSGKSTQIPQFLMDEISPMHKGAIAVTQPRRVA 135
+LP+ Q +EKIV ++ N V ++IGETGSGKSTQ+ Q L G IA+TQPRRVA
Sbjct: 3 NLPILQFEEKIVETVEKNSVVVIIGETGSGKSTQLSQILHRH-GYTKSGVIAITQPRRVA 61
Query: 136 AINLATRVAQEHGCRIGHEVGYSVRFDNKSHKTRTKLKYLTDGMLIRELMLDKNLSNYKC 195
A+++A RVAQE +G +VGY++RF++++ ++T++KYLTDG+L+RE + + L +Y
Sbjct: 62 AVSVARRVAQELDVPLGEDVGYAIRFEDRT-TSKTRIKYLTDGVLLRESLSNPMLDDYSV 120
Query: 196 IIIDEAHERTILTDLILGFLKELQLTKRKDLKVIVMSATLQADLFSKFFSNAPILFVEGR 255
II+DEAHER++ TD++LG +K L + + KV++ SATL + S+FFS P+L V G+
Sbjct: 121 IILDEAHERSLNTDILLGLVKRLVRIRASNFKVLITSATLDGEKVSEFFSGCPVLNVPGK 180
Query: 256 KFKVDRYYLPRPCEDIVDSVVRCSVQLNSSETTGDILCFLPGQEEIDKAVAILNKIIPYL 315
+ V+ Y ++S ++ ++ ++ E GDIL F+ GQ++I+K V+ L + + L
Sbjct: 181 LYPVEILYSKERPVSYIESSLKVAIDIHVREPEGDILIFMTGQDDIEKLVSRLEEKVRSL 240
Query: 316 DE-SVPRITAYPLYAALPPKDQAKVFEPLKGFKRKIVLATNIAETSVTIPGVKYVIDCGL 374
E S YPL+ +LPP+ Q +VF P R+ +++TNIAETS+T+ GV YVID G
Sbjct: 241 AEGSCMDAIIYPLHGSLPPEMQVRVFSPPPPNCRRFIVSTNIAETSLTVDGVVYVIDSGY 300
Query: 375 RKVKVWRHQLGLATLLTVPVSKASVAQRAGRAGRESSGKCFRLFTEADYK-QLPKQSESE 433
K + + G+ +L + +SK QRAGRAGR GKC+RL+ A Y+ + E
Sbjct: 301 VKQRQYNPSSGMFSLDVIQISKVQANQRAGRAGRTRPGKCYRLYPLAVYRDDFLDATIPE 360
Query: 434 ITRCEITSPILMLKQYGVQ--DIVNWSWLEHPGKEAIISGLKELYELGALNEQGRVTDRG 491
I R + +L LK + DI+ + +L+ P E++ LK+LY + A++E G +T G
Sbjct: 361 IQRTSLAGSVLYLKSLDLPDIDILKFDFLDAPSSESLEDALKQLYFIDAIDENGAITRIG 420
Query: 492 RKMALLPLAPHLSNVLIHAQETQVLPYVIDIVSCLSVENLVL--NPLPEERDEVNERRRA 549
R M+ LPL P LS LI A ET L + +V+ LS E +L P E+ ++
Sbjct: 421 RTMSDLPLEPSLSRTLIEANETGCLSQALTVVAMLSAETTLLPARSKPSEKKRKHDEDSN 480
Query: 550 LCTLGSKHGDLIMLKELFDMYQSLQSNSEKQEWCKQ-----LCV------------SQRG 592
L GS +GD I L ++F +S + WCK+ C+ + RG
Sbjct: 481 LPN-GSGYGDHIQLLQIF---ESWDRTNYDPVWCKENGMQPYCIVTSEGGQLYAVSAVRG 536
Query: 593 FKNVIKVREQLTGYMKRLYNEPVEIKTKQDTLQPEEDIATNLLQPPDIAGVLKCFLYGFV 652
V VR QL M+++ + + ++ D + + K G
Sbjct: 537 MVFVKDVRRQLCQIMQKISKDGRKSSSRDDYRK-----------------LRKALCVGNA 579
Query: 653 KNTAIGMPDKSFRTTPTGEPISIHPSSMLFMNSGDEIGPCP-AILYIEHVFTTKGYARSV 711
A M + T + + +HPSS+L S D G P ++Y E + TT+ + R+V
Sbjct: 580 NQIAERMLRHNGYRTLSFQSQLVHPSSVL---SADNDGMMPNYVVYHELISTTRPFMRNV 636
Query: 712 SRIELAWLQEIASGVLKQSTR 732
+++AW+ I + K + R
Sbjct: 637 CAVDMAWVAPIKRKIEKLNVR 657
>SPBC1711.17 [A] KOG0924 mRNA splicing factor ATP-dependent RNA helicase
Length = 912
Score = 352 bits (904), Expect = 9e-97
Identities = 181/427 (42%), Positives = 292/427 (67%), Gaps = 5/427 (1%)
Query: 74 RESLPVFQNKEKIVSHIKANPVTILIGETGSGKSTQIPQFLMDEISPMHKGAIAVTQPRR 133
RE LP F +E+++S I+ N V I++GETGSGK+TQ+ QFL ++ G I TQPRR
Sbjct: 489 REFLPAFAVREQLLSVIRDNQVLIVVGETGSGKTTQLAQFLYED-GYHRNGMIGCTQPRR 547
Query: 134 VAAINLATRVAQEHGCRIGHEVGYSVRFDNKSHKTRTKLKYLTDGMLIRELMLDKNLSNY 193
VAA+++A RV++E G R+G VGYS+RF++ + T +KY+TDG+L+RE ++ NL Y
Sbjct: 548 VAAMSVAKRVSEEMGVRLGSTVGYSIRFEDVTGPD-TVIKYMTDGVLLRESLMQNNLEKY 606
Query: 194 KCIIIDEAHERTILTDLILGFLKELQLTKRKDLKVIVMSATLQADLFSKFFSNAPILFVE 253
II+DEAHER++ TD+++G LK++ L++R+D+K++V SAT+ + FS FF AP +
Sbjct: 607 SVIIMDEAHERSLNTDILMGLLKKV-LSRRRDIKLLVTSATMNSQKFSDFFGGAPQFTIP 665
Query: 254 GRKFKVDRYYLPRPCEDIVDSVVRCSVQLNSSETTGDILCFLPGQEEIDKAVAILNKIIP 313
GR + VD + PC D V++ VR +Q++ S+ GDIL F+ GQE+I+ I+ +
Sbjct: 666 GRTYPVDIMFAKAPCSDYVEAAVRQVLQIHLSQPAGDILVFMTGQEDIEATCEIIADRLN 725
Query: 314 YLDESVPRITAYPLYAALPPKDQAKVFEPLKGFKRKIVLATNIAETSVTIPGVKYVIDCG 373
L ++ PR++ P+Y+ +P QAK+F+ + RK+V+ATNIAETS+T+ G+ YV+D G
Sbjct: 726 QLHDA-PRLSILPIYSQMPADLQAKIFDSAEPGVRKVVVATNIAETSLTVHGISYVVDTG 784
Query: 374 LRKVKVWRHQLGLATLLTVPVSKASVAQRAGRAGRESSGKCFRLFTEADY-KQLPKQSES 432
K+K++ +LG+ TL P+S+A+ QRAGRAGR G +RL+TE Y +++ + +
Sbjct: 785 YCKLKMYNSKLGIDTLQVTPISQANANQRAGRAGRTGPGIAYRLYTEMAYIREMFETTLP 844
Query: 433 EITRCEITSPILMLKQYGVQDIVNWSWLEHPGKEAIISGLKELYELGALNEQGRVTDRGR 492
EI R +++ +L+LK GV++I ++ +++ P + +++ L EL+ LGAL+ G++T G+
Sbjct: 845 EIQRTNLSNTVLILKSLGVEEISDFDFMDRPPNDTLMASLYELWTLGALDNFGKLTTLGK 904
Query: 493 KMALLPL 499
KM+L P+
Sbjct: 905 KMSLFPM 911
>SPAC145.03 [A] KOG0922 DEAH-box RNA helicase
Length = 647
Score = 352 bits (902), Expect = 2e-96
Identities = 208/652 (31%), Positives = 363/652 (54%), Gaps = 36/652 (5%)
Query: 74 RESLPVFQNKEKIVSHIKANPVTILIGETGSGKSTQIPQFLMDEISPMHKGAIAVTQPRR 133
++ LP+ + + +++ ++ N +TI++G TG GK+TQIPQFL + G I TQPRR
Sbjct: 22 KKLLPITKYRNQLLYAVEQNQITIVLGHTGCGKTTQIPQFLYEAGWASQNGIIGCTQPRR 81
Query: 134 VAAINLATRVAQEHGCRIGHEVGYSVRFDNKSHKTRTKLKYLTDGMLIRELMLDKNLSNY 193
+ A +++ RV+ E G GYS++FD+ + +TK+KY+TDG+L+ E+ D L Y
Sbjct: 82 LVAKSVSERVSLELNSPPGSLCGYSIQFDHNVSE-KTKIKYMTDGILLNEIFFDPLLERY 140
Query: 194 KCIIIDEAHERTILTDLILGFLKELQLTKRKDLKVIVMSATLQADLFSKFFSNAPI--LF 251
+I+DE HERT+ TDL+LG LK + L KR D ++++ SA++ A+ S+FF + +
Sbjct: 141 SIVILDEVHERTLSTDLLLGVLKRI-LEKRNDFRLVLSSASVDANKLSQFFGQDKVCTMS 199
Query: 252 VEGRKFKVDRYYLPRPCEDIVDSVVRCSVQLNSSETTGDILCFLPGQEEIDKAVAILNKI 311
+EG+ F V+ +L +P E+ VDS + + +NS+ GDIL FL G++EI+ + +
Sbjct: 200 IEGKLFPVETLFLQKPTENYVDSAIETVININSTYPPGDILVFLSGRKEIEYCIKKIEDS 259
Query: 312 IPYLDESVPRITAYPLYAALPPKDQAKVFEPLKGFKRKIVLATNIAETSVTIPGVKYVID 371
+ + E + PL+A L +Q +VF G RK++ +TNIAETS+TI G+ YV+D
Sbjct: 260 LIHASEDCQTLVPLPLHAGLTVDEQMRVFNIYDGDFRKVIFSTNIAETSITIDGIVYVVD 319
Query: 372 CGLRKVKVWRHQLGLATLLTVPVSKASVAQRAGRAGRESSGKCFRLFTEADYKQLPKQSE 431
G K +++ + L+ VP+SK+S QR+GRAGR GK FRL+TE Y + ++ E
Sbjct: 320 SGFNKQRIYNPYTRTSKLINVPISKSSAIQRSGRAGRTMRGKVFRLYTEKAYSLMKEEFE 379
Query: 432 SEITRCEITSPILMLKQYGVQDIVNWSWLEHPGKEAIISGLKELYELGALNEQGRVTD-R 490
++I C+++ +L LK G+++I+ + + P +++ L++LY LG L+E G +TD
Sbjct: 380 ADILNCDMSPLVLFLKGLGLKNILQFPFFVRPPTVHLMAALEDLYLLGVLDESGNLTDPL 439
Query: 491 GRKMALLPLAPHLSNVLIHAQETQVLPYVIDIVSCLSVENLVLNPLPEERDEVNERRRAL 550
G +++ L ++S L+ + + ++ I S L+ + NP + N+ A
Sbjct: 440 GIQISNSFLDANISKALLTSNQFGCTHEILSIASILTAGEVFYNPTSSSK---NDAFVAH 496
Query: 551 CTLGSKHGDLIMLKELFDMYQSLQSNSEKQEWCKQLCVSQRGFKNVIKVREQLTGYMKRL 610
+ + GD+I ++++S N + +WC++ ++ + + + +R L ++ +
Sbjct: 497 SSFFANEGDII---TALNVFESFVGNKKDLQWCRKNYLNYQTLRQALDIRTHLVRFLNKF 553
Query: 611 YNEPVEIKTKQDTLQPEEDIATNLLQPPDIAGVLKCFLYGFVKNTAIGMPDKSFRTTPTG 670
I T Q L D + +LKC L GFV+N A D S++T G
Sbjct: 554 -----SIPTAQ------------RLPSSDCSKILKCLLDGFVRNVAHLQNDGSYKTI-GG 595
Query: 671 EPISIHPSSMLFMNSGDEIGPCPAILYIEHVFT-TKGYARSVSRIELAWLQE 721
+ + + SS+L P I+Y V + T+ + +++S+IE WL +
Sbjct: 596 KQVWLDSSSVLHEKK------TPWIMYSSAVESETQIFVKNISKIESFWLDK 641
>7297620 [A] KOG0924 mRNA splicing factor ATP-dependent RNA helicase
Length = 703
Score = 325 bits (832), Expect = 2e-88
Identities = 232/690 (33%), Positives = 352/690 (50%), Gaps = 60/690 (8%)
Query: 63 LKTRALRLLKGRESLPVFQNKEKIVSHIKANPVTILIGETGSGKSTQIPQFLMDEISPMH 122
L ++ + + ++SLPVF + +I+ ++AN +++ ETGSGK+TQIPQFL+
Sbjct: 54 LTSKRTSIEQQQKSLPVFNCRHRILKELEANDTVLIMSETGSGKTTQIPQFLL-LAGYAK 112
Query: 123 KGAIAVTQPRRVAAINLATRVAQEHGCRIGHEVGYSVRFDNKSHKTRTKLKYLTDGMLIR 182
G I +TQPRRVAAI +A RVAQE IG VGY+VRF++ + + TK+++LTDG+L+R
Sbjct: 113 NGMIGITQPRRVAAITVARRVAQELNGTIGDTVGYTVRFEDVTSRA-TKIRFLTDGVLLR 171
Query: 183 ELMLDKNLSNYKCIIIDEAHERTILTDLILGFLKELQLTKRK----DLKVIVMSATLQAD 238
E + D+ L Y II+DEAHERT+ DL+ G +K+ Q +RK +LKV+V SAT+ D
Sbjct: 172 ESIKDRLLLKYSVIILDEAHERTVNADLLFGIVKDAQKERRKQKLANLKVVVTSATMDID 231
Query: 239 LFSKFFSNAPILFVEGRKFKVDRYYLPRPCEDIVDSVVRCSVQL-------------NSS 285
F +F N +++EGR + V + ED + +V+ V + N+
Sbjct: 232 HFGNYF-NCKGMYLEGRTYPVRVMHTKEEHEDYIHTVLPRRVDIPNRARGNRVIGPTNTP 290
Query: 286 ETTGDILCFLPGQEEIDKAVAILNKIIPYLDESVPRITAYPLYAALPPKDQAKVFEPLKG 345
G+ + P ++ I + + + LYA L Q + F P
Sbjct: 291 ACQGESIVVQPTD---CTSLKISCSLFQIDTTGTTDLRVFTLYAQLSQGKQLECFVPTPA 347
Query: 346 FKRKIVLATNIAETSVTIPGVKYVIDCGLRKVKVWRHQLGLATLLTVPVSKASVAQRAGR 405
RK++LATNIAETS+TIPG++ VIDCG K K + GL L +V +SKA QRAGR
Sbjct: 348 NVRKVILATNIAETSITIPGIRCVIDCGFVKEKSFNTVDGLDVLKSVRISKAQAWQRAGR 407
Query: 406 AGRESSGKCFRLFTEADYKQLPKQSESEITRCEITSPILMLKQYGVQDIVNWSWLEHPGK 465
AGR++ G C+R +T+A+ ++ EI R TS +L L + D N+ +L+ P +
Sbjct: 408 AGRDADGTCYRAYTKAEMDSFADATQPEILRTNPTSMVLQLLALDI-DCNNFDFLDPPLE 466
Query: 466 EAIISGLKELYELGAL--NEQGRVTDRGRKMALLPLAPHLSNVLIHAQETQVLPYVIDIV 523
+ + S K L LGA+ + +T GR+M PL P S +L+ A + ++ +V
Sbjct: 467 DGLRSAYKSLDALGAIKTGDDSYITPLGRQMVQYPLDPKYSKLLLTASSFGCMEEILSLV 526
Query: 524 SCLSVENLVLNPLPEERDEVNERRR-ALCTLGSKHGDLIMLKELFDMYQSLQSNSEKQEW 582
S LS +++ ++ E NE A SKHGD + L +F+ + L+S K W
Sbjct: 527 SVLSSDHVFVS-----NSEKNEMAALAHAKFQSKHGDHLTLLNVFNGF--LKSEKPKM-W 578
Query: 583 CKQLCVSQRGFKNVIKVREQLTGYMKRLYNEPVEIKTKQDTLQPEEDIATNLLQPPDIAG 642
C ++ R VR QL + L+ +A N DI
Sbjct: 579 CHDNYLNLRSLTYARNVRRQLREISEHLH------------------LALN--SSDDIEM 618
Query: 643 VLKCFLYGFVKNTAIGMPDKSFRTTPTGEPISIHPSSMLFMNSGDEIGPCPAILYIEHVF 702
+ KC L GF +N A+ D + T IHPSS+L IL+ E V
Sbjct: 619 LKKCILNGFFENIAVLQRDGFYITASGNIRSKIHPSSVLHGKYKPSY-----ILFTEIVQ 673
Query: 703 TTKGYARSVSRIELAWLQEIASGVLKQSTR 732
T + + R V+ I + W++E+ V TR
Sbjct: 674 TEQTFLRQVTEISIEWIKEVVPFVKNIPTR 703
>ECU11g0860 [A] KOG0922 DEAH-box RNA helicase
Length = 664
Score = 321 bits (823), Expect = 2e-87
Identities = 218/640 (34%), Positives = 350/640 (54%), Gaps = 57/640 (8%)
Query: 73 GRESLPVFQNKEKIVSHIKANPVTILIGETGSGKSTQIPQFLMDEISPMHKGAIAVTQPR 132
G + V ++I + ++ + V ++ G+TG GK+T+IP++L+ + G I +QPR
Sbjct: 53 GSGEVSVEDKMDEIFAKLEKSQVLLIQGDTGCGKTTKIPKYLLRKY-----GKIVCSQPR 107
Query: 133 RVAAINLATRVAQEHGCRIGHEVGYSVRFDNKSHKTRTKLKYLTDGMLIRELMLDKNLSN 192
R+AA+++A +VA + +IG +VGYS+RFD+ S RT+LKY+TDG+L+RE+ DK+L
Sbjct: 108 RIAAVSIAKKVAVDMKGKIGEDVGYSIRFDDMS-SGRTRLKYVTDGVLLREIKNDKHLKK 166
Query: 193 YKCIIIDEAHERTILTDLILGFLKELQLTKRKDLKVIVMSATLQADLFSKFFSNAPILFV 252
Y +IIDEAHER++ D++LG+LK + L++RKDL+V++MSATL ++ F+ FF + +
Sbjct: 167 YDVVIIDEAHERSVNIDILLGYLKSI-LSERKDLRVVIMSATLNSEKFASFF-RCQTVEI 224
Query: 253 EGRKFKVDRYYLPRP-CEDIVDSVVRCSVQLNSSETTGDILCFLPGQEEIDKAVAILNKI 311
R F ++ ++L + D VD ++ VQ++ E +GDIL FL G++EI+ IL ++
Sbjct: 225 RHRMFPLEIFFLKKSDVADYVDEAMKTVVQIHRGEESGDILVFLTGRDEINSGREILMEV 284
Query: 312 IPYLDESVPRITAYPLYAALPPKDQAKVFEPLKGFKRKIVLATNIAETSVTIPGVKYVID 371
+ E +Y+ L P++Q VF K KRKIVLATNIAETS+TI GV+YV+D
Sbjct: 285 LGNDAE------VCCIYSTLSPEEQEAVFRKTK--KRKIVLATNIAETSITIEGVRYVVD 336
Query: 372 CGLRKVKVWRHQLGLATLLTVPVSKASVAQRAGRAGRESSGKCFRLFTEADYKQLPKQSE 431
G K + G+ L V +SKA QRAGRAGR +GK FR++++ +Y+++ +
Sbjct: 337 SGRAKQMRYSASFGMDILEVVWISKAQAKQRAGRAGRTQAGKVFRMYSKEEYQKMDDNTT 396
Query: 432 SEITRCEITSPILMLKQYGVQDIVNWSWLEHPGKEAIISGLKELYELGALNEQGRVTDRG 491
EI C + +L LK GV DIVN++ ++ P + L+ LY L A+ G++T G
Sbjct: 397 PEIFCCNLGKIVLELKSIGVDDIVNFNLIDKPDASNVKKALEMLYYLRAIGGDGKITSIG 456
Query: 492 RKMALLPLAPHLSNVLIHAQETQVLPYVIDIVSCLSVENLVLNPLPEERDEVNERRRALC 551
K + +PL P L+ LI + E L V I + LSV N+ L+ +P A
Sbjct: 457 VKASTIPLDPELAVSLIVSSELGCLEDVSIIAAMLSVGNVWLD-VPRYSQSYKAFLGARA 515
Query: 552 TLGSKHGDLIMLKELFDMYQSLQSNSEKQEWCKQLCVSQRGFKNVIKVREQLTGYMKRLY 611
K GD +L +++ + W + GFK ++KR +
Sbjct: 516 AHFDKRGDHFLLLKIY------------RRW------EKTGFK---------ISHLKRWF 548
Query: 612 NEPVEIKTKQDTLQPEEDIATNLLQP--PDIAGVLKCFLYGFVKNTAIGMPDKSFRTTPT 669
+ +KT T++ ++ + + P D +G+L G+ N A + +S+ +
Sbjct: 549 ---LNVKTMLQTVKIKKQLCSMFRSPCKSDESGILPSLCAGYFMNVA-KLVGESYVSIFN 604
Query: 670 GEPISIHPSSMLFMNSGDEIGPCPAILYIEHVFTTKGYAR 709
P IH +S + + ILY T K YAR
Sbjct: 605 DTPCFIHYTSCMSRQN------AKYILYHTLCRTGKEYAR 638
>ECU09g0150 [A] KOG0924 mRNA splicing factor ATP-dependent RNA helicase
Length = 784
Score = 311 bits (796), Expect = 3e-84
Identities = 193/557 (34%), Positives = 319/557 (56%), Gaps = 31/557 (5%)
Query: 75 ESLPVFQNKEKIVSHIKANPVTILIGETGSGKSTQIPQFLMDEISPMHKGAIAVTQPRRV 134
+ LP+ ++ ++ + + V +L+GETGSGKSTQ+P++L E KG I TQPRR
Sbjct: 104 QRLPIESFRDDLMEFVGKHRVIVLVGETGSGKSTQVPKYLYQE-GYGDKGIIGCTQPRRA 162
Query: 135 AAINLATRVAQEHGCRIGHEVGYSVRFDNKSHKTRTKLKYLTDGMLIRELMLDKNLSNYK 194
AAI+LA+ + +E GC VGYS+RFD+ + + TK++Y+T+G+L++EL+ DK L Y
Sbjct: 163 AAISLASTLKREMGCA----VGYSIRFDSTTTQD-TKIRYMTEGILLQELLADKMLRRYS 217
Query: 195 CIIIDEAHERTILTDLILGFLKELQLTKRKDLKVIVMSATLQADLFSKFFSNAPILFVEG 254
+I+DEAHERT D+ +G LK L L +R DL++I+MSAT++A +F P +EG
Sbjct: 218 VVILDEAHERTTNLDISMGLLK-LALKERDDLRIIIMSATIEAQKLCNYF-GCPAFNIEG 275
Query: 255 RKFKVDRYYLPRPCEDIVDSVVRCSVQLNSSETTGDILCFLPGQEEIDKAVAIL-----N 309
R + V+ YL +D V+ V+ + ++ + GDIL F+ G+++++ V I+ N
Sbjct: 276 RSYPVETRYLSVNVDDYVEWTVKKILYIHENCGEGDILVFVTGRDDVEGVVGIVNHCIRN 335
Query: 310 KIIPYLDESVPRITAYPLYAALPPKDQAKVFEPLKGFKRKIVLATNIAETSVTIPGVKYV 369
K E + P Y+ LP + Q +VF+ K RK +++TN+AETS+TIP + YV
Sbjct: 336 KCFGEGSEGGRGLKVLPFYSQLPEEMQNRVFQAEKDV-RKCIVSTNVAETSLTIPNIGYV 394
Query: 370 IDCGLRKVKVWRHQLGLATLLTVPVSKASVAQRAGRAGRESSGKCFRLFTEADYK-QLPK 428
ID GL+K+ V+ + G +L+TVP+S+A+ QR GRAGR G C+R++T Y+ +
Sbjct: 395 IDTGLQKISVYSYDTG-ESLVTVPISRANADQRTGRAGRTRPGVCYRMYTADTYENDMLP 453
Query: 429 QSESEITRCEITSPILMLKQYGVQDIVNWSWLEHPGKEAIISGLKELYELGALNEQGRVT 488
EI R I + +L+L ++GV DI+ + +++ P +E I L L+ LGA+ +G +T
Sbjct: 454 SPVPEIQRTNIHNVVLLLLKHGVHDILGFDFVDRPSEELIQGALLGLHRLGAVCSRGLLT 513
Query: 489 DRGRKMALLPLAPHLSNVLIHAQETQVLPYVIDIVSCLSVENLVLNPLPEERDEVNERRR 548
G++M+ L L P L+ +++ A + + I S LSV + RD ++
Sbjct: 514 KVGKEMSELRLDPPLARMVLGAAGYGAVNEIASIASMLSVHEVF------HRD--FDKSS 565
Query: 549 ALCTLGSKHGDLIMLKELFDMYQSLQSNSEKQEWCKQLCVSQRGFKNVIKVREQLTGYMK 608
LC G D + L +F+ + ++ S EWC ++ VS+ K + + + ++
Sbjct: 566 PLCHQGC---DFLTLLNIFNAFIRQKNRS---EWCNKMKVSEHALKRATETKRAVLMSLR 619
Query: 609 RLYNEPVEIKTKQDTLQ 625
+ P+ D +Q
Sbjct: 620 EM-GVPISSTRSLDKIQ 635
>SPAPB1A10.06c [AJ] KOG0926 DEAH-box RNA helicase
Length = 1183
Score = 296 bits (759), Expect = 6e-80
Identities = 209/660 (31%), Positives = 329/660 (49%), Gaps = 93/660 (14%)
Query: 66 RALRLLKGRESLPVFQNKEKIVSHIKANPVTILIGETGSGKSTQIPQFLMDE--ISPMHK 123
R + + R +LP+ +++I+ I AN V I+ G TGSGK+TQ+PQFL + SP +
Sbjct: 387 RPPEIQESRLALPIVAEEQRIMEQIFANDVVIICGATGSGKTTQLPQFLFEAGFSSPESE 446
Query: 124 --GAIAVTQPRRVAAINLATRVAQEHGCRIGHEVGYSVRFDNKSHKTRTKLKYLTDGMLI 181
G IA+TQPRRVAA+++A RV++E +V Y +RFD+ + T +K++TDG+L+
Sbjct: 447 NPGMIAITQPRRVAAVSIAKRVSEEL-TGFSSKVSYQIRFDSTINPD-TAIKFMTDGILL 504
Query: 182 RELMLDKNLSNYKCIIIDEAHERTILTDLILGFLKELQLTKR---------KDLKVIVMS 232
REL D L+ Y +I+DEAHER++ TD++LG L + +R K LK+I+MS
Sbjct: 505 RELSSDFLLTAYSAVIVDEAHERSVNTDILLGLLSRIVRLRREMSKSDQKVKPLKLIIMS 564
Query: 233 ATLQADLFSK----FFSNAPILFVEGRKFKVDRYYLPRPCEDIVDSVVRCSVQLNSSETT 288
ATL+ FS+ F PI+ ++ R++ V ++ D + ++
Sbjct: 565 ATLRVTDFSENKLLFSVPPPIIKIDARQYPVSIHFNRTTKPDYLQDAFDKVCLIHKRLPA 624
Query: 289 GDILCFLPGQEEIDKAVAILNK-------------------------------------- 310
G IL FL GQ+E+++ +L K
Sbjct: 625 GSILVFLTGQQEVEQLCQMLRKRFVRSFRPLKSRARIVVSRKTMSVENEDLQSETEDIDQ 684
Query: 311 -------IIPYLDESVPRITAYPLYAALPPKDQAKVFEPLKGFKRKIVLATNIAETSVTI 363
+ Y DES P + PLY+ L +DQ KVF+ R ++ATN+AETS+TI
Sbjct: 685 VPTSSSSSVTYDDESEP-MYVLPLYSLLTTEDQMKVFDSSPEGHRMCIVATNVAETSITI 743
Query: 364 PGVKYVIDCGLRKVKVWRHQLGLATLLTVPVSKASVAQRAGRAGRESSGKCFRLFTEADY 423
P ++YV+DCG K +V+ + + +SKA+ QRAGRAGR G C+RL++ A +
Sbjct: 744 PNIRYVVDCGKAKERVYNEKTSVQKFEVRWISKANADQRAGRAGRTGPGHCYRLYSSAVF 803
Query: 424 -KQLPKQSESEITRCEITSPILMLKQYGVQDIVNWSWLEHPGKEAIISGLKELYELGALN 482
P S EI R + S +L +K + +I N+ + PG+ + LK L LGA++
Sbjct: 804 DSSFPLHSLPEILRTPVESIVLQMKNMNIDNIANFPFPTSPGRSRLEKSLKLLSNLGAID 863
Query: 483 EQGRVTDRGRKMALLPLAPHLSNVLIHAQETQVLPYVIDIVSCLSVENLVL--------- 533
+G +T G +M+L PL+P S +LI Q+ LPYVI +VS LS+ L +
Sbjct: 864 SEGVLTKLGEQMSLFPLSPRFSKMLIIGQQHGCLPYVIALVSALSINQLFVSKQSLLYDA 923
Query: 534 ---NPLPEERD-----------EVNERRRALCTLGSKHGDL---IMLKELFDMYQSLQSN 576
N EE D E R R S+ + L +
Sbjct: 924 HDKNSRSEETDLIDDDEIKQKEEYKNRMRGYFNAISRFQAIDPDAPALSLLSAVCAYDYA 983
Query: 577 SEKQEWCKQLCVSQRGFKNVIKVREQLTGYMKRLYNEPVEIKTKQDTLQPEEDIATNLLQ 636
S+K+++CK+ + ++ + V +R+Q+ G +KR Y VE + + L+P + L+
Sbjct: 984 SDKRKFCKENYLREKALEEVTNLRKQIIGLLKR-YMVRVEKEFFKLQLKPPTSVQIKALR 1042
>SPBC19C2.01 [A] KOG0923 mRNA splicing factor ATP-dependent RNA helicase
Length = 739
Score = 290 bits (743), Expect = 4e-78
Identities = 148/329 (44%), Positives = 224/329 (67%), Gaps = 2/329 (0%)
Query: 70 LLKGRESLPVFQNKEKIVSHIKANPVTILIGETGSGKSTQIPQFLMDEISPMHKGAIAVT 129
L R+SLPV+Q K+ ++ I V +++ ETGSGK+TQ+PQFL + I T
Sbjct: 411 LESSRKSLPVYQYKDDLLKAINEYQVLLIVAETGSGKTTQLPQFLHEAGYTKGNKKICCT 470
Query: 130 QPRRVAAINLATRVAQEHGCRIGHEVGYSVRFDNKSHKTRTKLKYLTDGMLIRELMLDKN 189
QPRRVAA+++A RVA+E R+G EVGYS+RF+N + + +T +KYLTDGML+RE + + +
Sbjct: 471 QPRRVAAMSVAARVAKEMDVRLGQEVGYSIRFENATSE-KTVIKYLTDGMLLREFLTEPD 529
Query: 190 LSNYKCIIIDEAHERTILTDLILGFLKELQLTKRKDLKVIVMSATLQADLFSKFFSNAPI 249
L++Y IIIDEAHERT+ TD++ G +K++ R DLKV++ SAT+ A+ FS +F AP+
Sbjct: 530 LASYSVIIIDEAHERTLHTDILFGLVKDIARF-RPDLKVLISSATIDAEKFSAYFDEAPV 588
Query: 250 LFVEGRKFKVDRYYLPRPCEDIVDSVVRCSVQLNSSETTGDILCFLPGQEEIDKAVAILN 309
+V GR++ VD YY P+P + + + + +Q+++++ GDIL FL GQ+EI+ +
Sbjct: 589 FYVPGRRYPVDIYYTPQPEANYIQAAITTILQIHTTQPAGDILVFLTGQDEIELMSENMQ 648
Query: 310 KIIPYLDESVPRITAYPLYAALPPKDQAKVFEPLKGFKRKIVLATNIAETSVTIPGVKYV 369
++ L + +P I P+YA LP + QAK+F+P RK+VLATNIAETS+TI GV +V
Sbjct: 649 ELCRILGKRIPEIILCPIYANLPSELQAKIFDPTPPGARKVVLATNIAETSITIDGVNFV 708
Query: 370 IDCGLRKVKVWRHQLGLATLLTVPVSKAS 398
ID G K ++ + G+ +L++VP S+AS
Sbjct: 709 IDSGFVKQNMYNPRTGMESLVSVPCSRAS 737
>At5g10370_1 [A] KOG0922 DEAH-box RNA helicase
Length = 1427
Score = 283 bits (723), Expect = 9e-76
Identities = 195/622 (31%), Positives = 325/622 (51%), Gaps = 40/622 (6%)
Query: 75 ESLPVFQNKEKIVSHIKANPVTILIGETGSGKSTQIPQFLMDEISPMHKGAIAVTQPRRV 134
+ LP++ + +I+ I + +LIGETGSGKSTQ+ QFL D +I TQPR++
Sbjct: 304 DGLPIYAYRRQILKKIHREQIMVLIGETGSGKSTQLVQFLADS-GVAASESIVCTQPRKI 362
Query: 135 AAINLATRVAQEH-GCRIGHEVGYSVRFDNKSHKTRTKLKYLTDGMLIRELMLDKNLSNY 193
AA+ LA RV +E GC + V + F + + + +K+ Y+TD L++ M D++LS
Sbjct: 363 AAMTLADRVREESSGCYEENTVSCTPTFSS-TEEISSKVVYMTDNCLLQHYMKDRSLSGI 421
Query: 194 KCIIIDEAHERTILTDLILGFLKELQLTKRKDLKVIVMSATLQADLFSKFFSNAPILFVE 253
C+IIDEAHER++ TDL+L LK+L L++R DL++++MSAT A S++F + IL V
Sbjct: 422 SCVIIDEAHERSLNTDLLLALLKKL-LSRRIDLRLVIMSATADAKQLSQYFFSCGILLVN 480
Query: 254 GRKFKVDRYYLPRPCED---------IVDSVVRCSVQLNSSETTGDILCFLPGQEEIDKA 304
GR F V+ Y P E+ V VV+ +V+++ +E G IL FL Q E++ A
Sbjct: 481 GRNFPVEIVYSPSDTEENSVVGGIASYVGDVVKMAVEIHKTEKEGTILAFLTSQAEVEWA 540
Query: 305 VAILNKIIPYLDESVPRITAYPLYAALPPKDQAKVFEPLKGFKRKIVLATNIAETSVTIP 364
+ I P A PL+ L ++Q +VF+ G +RK++ ATNIAETS+TIP
Sbjct: 541 C---ERFI------TPSAIALPLHGKLSFEEQFRVFQNHPG-RRKVIFATNIAETSLTIP 590
Query: 365 GVKYVIDCGLRKVKVWRHQLGLATLLTVPVSKASVAQRAGRAGRESSGKCFRLFTEADYK 424
GVKYVID G+ K + + G++ L VS++S QRAGRAGR G+C+RL+++ D+
Sbjct: 591 GVKYVIDSGMVKESKYEPRTGMSILKVCRVSQSSARQRAGRAGRTEPGRCYRLYSKNDFD 650
Query: 425 QLPKQSESEITRCEITSPILMLKQYGVQDIVNWSWLEHPGKEAIISGLKELYELGALNEQ 484
+ E EI R + +L + GV +I +++++ P EAI ++ L +LGA+ E+
Sbjct: 651 SMNLNQEPEIRRVHLGVALLRMLALGVNNIAEFNFVDAPVPEAIAMAVQNLVQLGAVVEK 710
Query: 485 GRV---TDRGRKMALLPLAPHLSNVLIHAQETQVLPYVIDIVSCLSVENLVLNPLPEERD 541
V T G + L L P L +++ ++ I + + ++ + + + D
Sbjct: 711 NGVHELTQEGHCLVKLGLEPKLGKLILGCFRHRMGKEGIVLAAVMANASSIFCRVGNFDD 770
Query: 542 EVNERRRALCTLGSKHGDLIMLKELFDMYQSLQSNSEKQEWCKQLCVSQRGFKNVIKVRE 601
++ R + +++GDL L ++ + SL + +WC + ++ + + +
Sbjct: 771 KMKADRLKV-QFCNQNGDLFTLLSVYKEWASL-PRERRNKWCWENSLNAKSMRRCEDTVK 828
Query: 602 QLTGYMKRLYNEPVEIKTKQDTLQPEEDIATNLLQPPDIAGVLKCFLYGFVKNTAI--GM 659
+L ++R E + P E + + L +N A+ G
Sbjct: 829 ELEICIER---ELTLVSPSYWVWNPNEGTKHD-------KHLKMVILASLAENVAMYTGY 878
Query: 660 PDKSFRTTPTGEPISIHPSSML 681
+ TG+ + +HPS L
Sbjct: 879 NQLGYEVALTGQQVQLHPSCSL 900
>At4g01020_1 [A] KOG0922 DEAH-box RNA helicase
Length = 1424
Score = 274 bits (700), Expect = 4e-73
Identities = 174/522 (33%), Positives = 285/522 (54%), Gaps = 28/522 (5%)
Query: 75 ESLPVFQNKEKIVSHIKANPVTILIGETGSGKSTQIPQFLMDEISPMHKGAIAVTQPRRV 134
+ LP++ + +I+ I + +LIGETGSGKSTQ+ QFL D +I TQPR++
Sbjct: 301 DGLPIYAYRRQILKKIHCEQIMVLIGETGSGKSTQLVQFLADS-GVAASESIVCTQPRKI 359
Query: 135 AAINLATRVAQEH-GCRIGHEVGYSVRFDNKSHKTRTKLKYLTDGMLIRELMLDKNLSNY 193
AA+ L RV +E GC + V + F + + + +K+ Y+TD L++ M D++LS
Sbjct: 360 AAMTLTDRVREESSGCYEENTVSCTPTFSS-TEEISSKVVYMTDNCLLQHYMKDRSLSGI 418
Query: 194 KCIIIDEAHERTILTDLILGFLKELQLTKRKDLKVIVMSATLQADLFSKFFSNAPILFVE 253
C+IIDEAHER++ TDL+L L++L L++R DL++++MSAT A+ S++ + IL V
Sbjct: 419 SCVIIDEAHERSLNTDLLLALLRKL-LSRRIDLRLVIMSATADANQLSQYLFDCGILHVN 477
Query: 254 GRKFKVDRYYLPRPCED---------IVDSVVRCSVQLNSSETTGDILCFLPGQEEIDKA 304
GR F V+ Y P E+ VV+ +V+++ +E G IL FL Q E++ A
Sbjct: 478 GRNFPVEIVYSPSGTEENSVVGRIASYAGDVVKMAVEIHKTEKEGTILAFLTSQAEVEWA 537
Query: 305 VAILNKIIPYLDESVPRITAYPLYAALPPKDQAKVFEPLKGFKRKIVLATNIAETSVTIP 364
P A PL+ L ++Q VF+ G +RK++ ATNIAETS+TIP
Sbjct: 538 CERF---------VAPSAIALPLHGKLSFEEQFMVFQNYPG-RRKVIFATNIAETSLTIP 587
Query: 365 GVKYVIDCGLRKVKVWRHQLGLATLLTVPVSKASVAQRAGRAGRESSGKCFRLFTEADYK 424
GVKYVID G+ K + + G++ L VS++S QRAGRAGR G+C+RL+++ D+
Sbjct: 588 GVKYVIDSGMVKESKYEPRTGMSILKVCQVSQSSARQRAGRAGRTEPGRCYRLYSKTDFD 647
Query: 425 QLPKQSESEITRCEITSPILMLKQYGVQDIVNWSWLEHPGKEAIISGLKELYELGALNEQ 484
+ E EI R + +L + G+ +I + +++ P EAI ++ L +LGA+ E+
Sbjct: 648 SMNLNQEPEIRRVHLGVALLRMLALGIDNIAAFEFVDAPVPEAIAMAIQNLVQLGAVVEK 707
Query: 485 GRV---TDRGRKMALLPLAPHLSNVLIHAQETQVLPYVIDIVSCLSVENLVLNPLPEERD 541
V T G + L L P L +++ ++ I + + ++ + + + D
Sbjct: 708 NGVLELTQEGHCLVKLGLEPKLGKLILGCFRHRMGKEGIVLAAVMANASSIFCRVGNFDD 767
Query: 542 EVNERRRALCTLGSKHGDLIMLKELFDMYQSLQSNSEKQEWC 583
++ R + + +GDL L ++ + SL + +WC
Sbjct: 768 KMKADRLKV-QFCNDNGDLFTLLSVYKEWASL-PRDRRNKWC 807
>Hs22066120 [A] KOG0922 DEAH-box RNA helicase
Length = 516
Score = 261 bits (666), Expect = 4e-69
Identities = 154/455 (33%), Positives = 251/455 (54%), Gaps = 22/455 (4%)
Query: 175 LTDGMLIRELMLDKNLSNYKCIIIDEAHERTILTDLILGFLKEL----QLTKRKDLKVIV 230
+TDG L++ ++ D +L+ ++ II+DEAHERT+ TD++ G LK+L +++ LKV+V
Sbjct: 1 MTDGCLLKHILGDPSLTKFRVIILDEAHERTLTTDILFGLLKKLFQEKSANRKEHLKVVV 60
Query: 231 MSATLQADLFSKFFSNAPILFVEGRKFKVDRYYL----PRPCEDI--VDSVVRCSVQLNS 284
MSAT++ S FF N PI + GR + V + PR E+ + ++V+ ++ ++
Sbjct: 61 MSATMELAKLSAFFGNCPIFDIPGRLYPVREKFCNLIGPRDRENTAYIQAIVKVTMDIHL 120
Query: 285 SETTGDILCFLPGQEEIDKAVAILNKIIPYLDES-------VPRITAYPLYAALPPKDQA 337
+E GDIL FL GQ EI+K+ +L ++ +D + + P Y ++ Q
Sbjct: 121 NEMAGDILVFLTGQFEIEKSCELLFQMAESVDYDYDVQDTILDGLLILPCYGSMTTDQQR 180
Query: 338 KVFEPLKGFKRKIVLATNIAETSVTIPGVKYVIDCGLRKVKVWRHQLGLATLLTVPVSKA 397
++F P RK V++TNI+ TS+TI G +YV+D G K +LGL L VP+SK+
Sbjct: 181 RIFLPPPPGIRKCVISTNISATSLTIDGTRYVVDGGFVKQLNHNPRLGLDILEVVPISKS 240
Query: 398 SVAQRAGRAGRESSGKCFRLFTEADYKQ-LPKQSESEITRCEITSPILMLKQYGVQDIVN 456
QR+GRAGR SSGKCFR++++ + Q +P EI R +TS +L LK + D++
Sbjct: 241 EALQRSGRAGRTSSGKCFRIYSKDFWNQCMPDHVIPEIKRTSLTSVVLTLKCLAIHDVIR 300
Query: 457 WSWLEHPGKEAIISGLKELYELGALNEQGRVTDRGRKMALLPLAPHLSNVLIHAQETQVL 516
+ +L+ P + I+ LK+LY+ A++ G VT G M PL PHL+ +I A
Sbjct: 301 FPYLDPPNERLILEALKQLYQCDAIDRSGHVTRLGLSMVEFPLPPHLTCAVIKAASLDCE 360
Query: 517 PYVIDIVSCLSVENLVLNPL-PEERDEVNERRRALCTLGSKHGDLIMLKELFDMYQSLQS 575
++ I + LSVEN+ + P+ PE + E +R R L D L +F + +S
Sbjct: 361 DLLLPIAAMLSVENVFIRPVDPEYQKEAEQRHRELAAKAGGFNDFATLAVIF---EQCKS 417
Query: 576 NSEKQEWCKQLCVSQRGFKNVIKVREQLTGYMKRL 610
+ WC++ + R + +V QL +++L
Sbjct: 418 SGAPASWCQKHWIHWRCLFSAFRVEAQLRELIRKL 452
>7293584_2 [A] KOG0922 DEAH-box RNA helicase
Length = 838
Score = 261 bits (666), Expect = 4e-69
Identities = 177/559 (31%), Positives = 292/559 (51%), Gaps = 36/559 (6%)
Query: 66 RALRLLKGRESLPVFQNKEKIVSHIKANPVTILIGETGSGKSTQIPQFLMDEISPMHKGA 125
R +L + + +LP+ + ++ + + + V I+ G+TG GKSTQ+PQ+L D +
Sbjct: 6 RIRKLRQTQRNLPIARFRKDLREALDTSRVVIVAGDTGCGKSTQVPQYLYD----FGYRS 61
Query: 126 IAVTQPRRVAAINLATRVAQEHGCRIGHEVGYSVRFDNKSHKTRTKLKYLTDGMLIRELM 185
IA TQPRR+A ++L RVA E G V + +RF+ +S T + ++T+G+L+R+L
Sbjct: 62 IACTQPRRLACVSLCKRVAHELLDDYGSRVAFQIRFE-RSRTKLTNILFITEGLLLRQLA 120
Query: 186 LDKNLSNYKCIIIDEAHERTILTDLILGFLKELQLTKRKDLKVIVMSATLQADLFSKFFS 245
+ NL Y +I+DE HER + D +LG K L L R LK+I+MSAT+ +LF +F
Sbjct: 121 VAANLDQYDALILDEIHERNLFGDFLLGVTKCL-LRARPQLKLILMSATINVELFHGYFG 179
Query: 246 N--APILFVEGRKFKVDRYYLPRPCEDI--------------VD-----SVVRCSVQLNS 284
A ++ V GR F + YLP P ++ +D V+ Q
Sbjct: 180 EEGARLVQVPGRLFPIKLRYLPPPALELKAGQATSKRSQRNRIDPAPFVQVLSLIDQQYP 239
Query: 285 SETTGDILCFLPGQEEIDKAVAILNKIIPYLDESVPRITAYPLYAALPPKDQAKVFEPLK 344
+ GD+L F+ G EI+ V +++ Y E + PL++ DQ+KVF+
Sbjct: 240 TSERGDVLIFVSGVNEIESVVEAVHE---YATEQTHWLVL-PLHSGQAIADQSKVFDYAP 295
Query: 345 GFKRKIVLATNIAETSVTIPGVKYVIDCGLRKVKVWRHQLGLATLLTVPVSKASVAQRAG 404
RK +++TNIAETS+T+ GV++V+D G K + L VSK+S QR G
Sbjct: 296 EGMRKCIVSTNIAETSLTVDGVRFVVDSGKVKEMNFDATCKGQRLKEFWVSKSSADQRKG 355
Query: 405 RAGRESSGKCFRLFTEADYKQLPKQSESEITRCEITSPILMLKQYGVQDIVNWSWLEHPG 464
RAGR G CFRL+T Y EI R + + +L + G+ D+ + ++E P
Sbjct: 356 RAGRTGPGVCFRLYTAEQYNAFEAYPTPEIYRVPLDTMLLQMVSMGLPDVRAFPFIEAPE 415
Query: 465 KEAIISGLKELYELGALNEQGRVTDRGRKMALLPLAPHLSNVLIHAQETQVLPYVIDIVS 524
E I + L + AL+ + ++T GR +A LP+ + +L+ + ++ + +
Sbjct: 416 TERIEQTILALKQHCALSVEEKITPLGRSLANLPVELSIGKMLLMGSVFPEVEQLLTLAA 475
Query: 525 CLSVENLVLNPLPEERDEVNERRRALCTLGSKHGDLIMLKELFDMYQSLQSNSE-KQEWC 583
LSV+N + N ++ V ER +L S HGDL L L++++ L+ + ++WC
Sbjct: 476 MLSVQNPLTNRAHTDQRCVRERE----SLESDHGDLFTLVRLYNVWVQLKMRRDGTRQWC 531
Query: 584 KQLCVSQRGFKNVIKVREQ 602
++L + ++ F V K+R+Q
Sbjct: 532 RRLGIEEQRFYEVTKLRQQ 550
>7292966 [A] KOG0924 mRNA splicing factor ATP-dependent RNA helicase
Length = 555
Score = 254 bits (650), Expect = 3e-67
Identities = 163/505 (32%), Positives = 269/505 (52%), Gaps = 34/505 (6%)
Query: 220 LTKRKDLKVIVMSATLQADLFSKFFSNAPILFVEGRKFKVDRYYLPRPCEDIVDSVVRCS 279
+ +R DLK+IV SAT+ + F+ FF N P + GR F VD + CED V+S V+ +
Sbjct: 7 VARRHDLKLIVTSATMDSSKFATFFGNVPTFTIPGRTFPVDVMFSKNTCEDYVESAVKQA 66
Query: 280 VQLNSSETTGDILCFLPGQEEIDKAVAILNKIIPYLDESVPRITAYPLYAALPPKDQAKV 339
+Q++ + GD+L F+PGQE+I+ +L + + +D + P ++ P+Y+ LP QAK+
Sbjct: 67 LQVHLTPNEGDMLIFMPGQEDIEVTCEVLEERLAEIDNA-PALSILPIYSQLPSDLQAKI 125
Query: 340 FEPLKGFKRKIVLATNIAETSVTIPGVKYVIDCGLRKVKVWRHQLGLATLLTVPVSKASV 399
F+ RK V+ATNIAETS+T+ G+ YVID G K+KV+ ++G+ L P+S+A+
Sbjct: 126 FQKSSDGLRKCVVATNIAETSLTVDGIIYVIDSGYCKLKVYNPRIGMDALQIYPISQANA 185
Query: 400 AQRAGRAGRESSGKCFRLFTEADYK-QLPKQSESEITRCEITSPILMLKQYGVQDIVNWS 458
QR+GRAGR G+ +RL+T+ YK +L + EI R + + +L+LK GV D++ +
Sbjct: 186 NQRSGRAGRTGPGQAYRLYTQRQYKDELLALTVPEIQRTNLANTVLLLKSLGVVDLLQFH 245
Query: 459 WLEHPGKEAIISGLKELYELGALNEQGRVTDRGRKMALLPLAPHLSNVLIHAQETQVLPY 518
+++ P ++ I++ L +L+ LGAL+ G +T GR+MA PL P +LI A
Sbjct: 246 FMDPPPQDNILNSLYQLWILGALDHTGALTTLGRQMAEFPLDPPQCQMLIVACRMGCSAE 305
Query: 519 VIDIVSCLSVENLVLNPLPEERDEVNERRRALCTLGSKHGDLIMLKELFDMYQSLQSNSE 578
V+ IVS LSV ++ P E DE + R S H ++YQ + N+
Sbjct: 306 VLIIVSMLSVPSIFYRPKGRE-DEADGVREKFQRPESDH------LTYLNVYQQWRQNNY 358
Query: 579 KQEWCKQLCVSQRGFKNVIKVREQLTGYMKRLYNEPVEIKTKQDTLQPEEDIATNLLQPP 638
WC + + + + V +VR+QL +I T+Q+ I ++++
Sbjct: 359 SSTWCNEHFIHIKAMRKVREVRQQLK-----------DIMTQQNLSVISCGIDWDIVR-- 405
Query: 639 DIAGVLKCFLYGFVKNTAIGMPDKSFRTTPTGEPISIHPSSMLFMNSGDEIGPCP-AILY 697
+ + Y + IG + TG P +HP+S L+ +G P ++Y
Sbjct: 406 --KCICSAYFYQAARLKGIG----EYVNLRTGMPCHLHPTSALY-----GLGTTPDYVVY 454
Query: 698 IEHVFTTKGYARSVSRIELAWLQEI 722
E + T K Y + + ++ WL E+
Sbjct: 455 HELIMTAKEYMQCATAVDGYWLAEL 479
>CE27603 [A] KOG0922 DEAH-box RNA helicase
Length = 974
Score = 246 bits (628), Expect = 9e-65
Identities = 178/557 (31%), Positives = 293/557 (51%), Gaps = 41/557 (7%)
Query: 69 RLLKGRESLPVFQNKEKIVSHIKANPVTILIGETGSGKSTQIPQFLMDEISPMHKGAIAV 128
+L K ++ LP+ + +IV +K N V I+ G+TG GKSTQ+PQ+L+ +A
Sbjct: 84 KLRKLQKELPIAERAGEIVELLKTNQVLIVAGDTGCGKSTQVPQYLLKAGFT----GVAC 139
Query: 129 TQPRRVAAINLATRVAQEHGCRIGHEVGYSVRFDNKSHKTRTKLKYLTDGMLIRELMLDK 188
TQPRR+A LA RVA E + G EV + +RF+ + +TKL +LT+G+L+R++ D
Sbjct: 140 TQPRRIACTALARRVAYETLNQYGSEVAFQIRFETTKSQ-KTKLLFLTEGLLLRQMEKDS 198
Query: 189 NLSNYKCIIIDEAHERTILTDLILGFLKELQLTKRKDLKVIVMSATLQADLFSKFFSNAP 248
L Y II+DE HER + +DL++G L++L TKR DLK+I+MSAT+ DLF +F AP
Sbjct: 199 LLEKYNVIILDEVHERHLTSDLLIGLLRDL-CTKRDDLKLILMSATINLDLFKGYFEGAP 257
Query: 249 ILFVEGRKFKVDRYYLPRPCEDIVDSVVRCSVQLN---------------SSETTGDILC 293
++ V GR F +D + P + +D + + +++ S GD L
Sbjct: 258 VVQVPGRLFPIDVRW--HPIKQFIDQSDKKTHKIDPEPYLKILELIDKQFPSTQRGDALI 315
Query: 294 FLPGQEEIDKAVAILNKIIPYLDESVPRITAYPLYAALPPKDQAKVFEPLKGFKRKIVLA 353
FL G EI L + + L++ L ++Q KVF+ RK +L+
Sbjct: 316 FLNGVAEISMVAEHLKNYAELTNGWI----ILMLHSTLSVEEQDKVFDQAPVGIRKCILS 371
Query: 354 TNIAETSVTIPGVKYVIDCGLRKVKVWRHQLGLAT--LLTVPVSKASVAQRAGRAGRESS 411
TN+AETSVTI G+++VID G KV + +H+ G T L VSKAS QR GRAGR
Sbjct: 372 TNVAETSVTIDGIRFVIDSG--KVNLIKHEPGTGTQKLTEFWVSKASANQRKGRAGRTGP 429
Query: 412 GKCFRLFTEADYKQLPKQSESEITRCEITSPILMLKQYGV-QDIVNWSWLEHPGKEAIIS 470
G C+RL+++ ++++ + SEI R + L + + D + ++E P ++ +
Sbjct: 430 GICYRLYSQEQFEKMDDFTVSEINRVSLQEMALKMISLNLGLDPRTFPFIEKPSEDVLNE 489
Query: 471 GLKEL-YELGALNEQGRV---TDRGRKMALLPLAPHLSNVLIHAQETQVLPYVIDIVSCL 526
GL+ L ++ +++G + T G ++ LP+ ++ +L++ L ++ + + L
Sbjct: 490 GLEVLKFQRVLRSDRGDILTLTALGNMVSKLPVEVPIAKMLVYGCVVDELEVMLTVAAGL 549
Query: 527 SVENLVLNPLPEERDEVNERRRALCTLGSKHGDLIMLKELFDMYQSLQS-NSEKQEWCKQ 585
SV++ N E E+ ERR +L S GD L +F + ++ + W +
Sbjct: 550 SVQSPFTNRSYREL-EIVERR---ASLTSPLGDPFTLISIFREWVLQKAFEGTARRWTME 605
Query: 586 LCVSQRGFKNVIKVREQ 602
+ + + K+R Q
Sbjct: 606 NGIDEHRLYEISKLRAQ 622
>7298709 [A] KOG0920 ATP-dependent RNA helicase A
Length = 674
Score = 246 bits (628), Expect = 9e-65
Identities = 180/621 (28%), Positives = 306/621 (48%), Gaps = 77/621 (12%)
Query: 58 VSNKELKTRALRLLKGRESLPVFQNKEKIVSHIKANPVTILIGETGSGKSTQIPQFLMDE 117
+ ++L+ A + L+ R+ LP + + I+ ++ N V +++G TG GK+TQ+PQ L+D+
Sbjct: 63 LGQRQLEENAKKRLEARKKLPTMKYADDIIQAVRENQVILIVGSTGCGKTTQVPQILLDD 122
Query: 118 ISPMHKGA-----IAVTQPRRVAAINLATRVAQEHGCRIGHEVGYSVRFDNKSHKTRTKL 172
+ +G I TQPRR++AI +A V+ E +G+ VGY +R +++ + R +
Sbjct: 123 A--ISRGCASSCRIICTQPRRISAIAIAEWVSYERCESLGNSVGYQIRLESRKARERASI 180
Query: 173 KYLTDGMLIRELMLDKNLSNYKCIIIDEAHERTILTDLILGFLKELQLTKRKDLKVIVMS 232
Y T G+L+++L D + N +I+DE HER++ TDL++G LK + L R DLKVI+MS
Sbjct: 181 TYCTTGVLLQQLQSDPLMHNLSVLILDEIHERSVETDLLMGLLKVI-LPHRPDLKVILMS 239
Query: 233 ATLQADLFSKFFSNAPILFVEGRKFKVDRYYLP----------------RPCED------ 270
AT++ F +F+N P+ +EG F V YL RP D
Sbjct: 240 ATVREQDFCDYFNNCPMFRIEGVMFPVKMLYLEDVLSKTNYEFQKFRDRRPKRDPPERRM 299
Query: 271 ---------------IVDSVVRCSVQLNSS-------------------ETTGDILCFLP 296
DS V ++L S E G IL FLP
Sbjct: 300 KHEAMIEPYLRRIRNSYDSRVLDKLRLPESEGCEDIDFIADLVYYICENEPEGAILVFLP 359
Query: 297 GQEEIDKAVAILNKIIPYLDESV---PRITAYPLYAALPPKDQAKVFEPLKGFKRKIVLA 353
G ++I + IL+K P + + +PL++ + +Q VF +RK++++
Sbjct: 360 GYDKISQLYNILDK--PKTSKGQRWRDHMAVFPLHSLMQSGEQQAVFRRPPAGQRKVIIS 417
Query: 354 TNIAETSVTIPGVKYVIDCGLRKVKVWRHQLGLATLLTVPVSKASVAQRAGRAGRESSGK 413
T IAETSVTI V YVI+ G K + + + +L V V+KA+ QR GRAGR G
Sbjct: 418 TIIAETSVTIDDVVYVINSGRTKATNYDIETNIQSLDEVWVTKANTQQRRGRAGRVRPGI 477
Query: 414 CFRLFTEADYKQLPKQSESEITRCEITSPILMLKQYGVQDIVNW--SWLEHPGKEAIISG 471
C+ LF+ A ++ EI R ++ S IL LK + D + + + P EAI G
Sbjct: 478 CYNLFSRAREDRMDDIPTPEILRSKLESIILSLKLLHIDDPYRFLQTLINAPNPEAIKMG 537
Query: 472 LKELYELGALNEQGRVTDRGRKMALLPLAPHLSNVLIHAQETQVLPYVIDIVSCLSVENL 531
++ L + AL++ G +T G +A LP+ P + +++ + L + + LS ++
Sbjct: 538 VELLKRIEALDQTGTLTPLGMHLAKLPIDPQMGKMILMSALFCCLDPITSAAAALSFKSP 597
Query: 532 VLNPLPEERDEVNERRRALCTLGSKHGDLIMLKELFDMYQSLQSNSEKQEWCKQLCVSQR 591
+PL +E +RR + S H +M+ Y+ + + ++++C + +S
Sbjct: 598 FYSPLGKESRVDEIKRRMARNMRSDH---LMVHNTIIAYRDSRYSHAERDFCYKNFLSSM 654
Query: 592 GFKNVIKVREQLTGYMKRLYN 612
+ + +++ Q + + LYN
Sbjct: 655 TLQQLERMKNQ---FSELLYN 672
>Hs20336300 [A] KOG0925 mRNA splicing factor ATP-dependent RNA helicase
Length = 743
Score = 244 bits (623), Expect = 3e-64
Identities = 169/577 (29%), Positives = 302/577 (52%), Gaps = 29/577 (5%)
Query: 65 TRALRLLKGRESLPVFQNKEKIVSHIKANPVTILIGETGSGKSTQIPQFLMDEISPMH-- 122
+R +LLK RE LP+++ K + ++ N + I+ G+ GKS Q+PQ+ + +H
Sbjct: 50 SRYYKLLKEREDLPIWKEKYSFMENLLQNQIVIVSGDAKCGKSAQVPQWCAEYCLSIHYQ 109
Query: 123 KGAIAVTQPRRVAAINLATRVAQEHGCRIGHEVGYSVRFDNKSHKTRTKLKYLTDGMLIR 182
G + TQ + + LA RVA E IGHEVGY + F+N T L+Y TD ML R
Sbjct: 110 HGGVICTQVHKQTVVQLALRVADEMDVNIGHEVGYVIPFENCC-TNETILRYCTDDMLQR 168
Query: 183 ELMLDKNLSNYKCIIIDEAHERTILTDLILGFLKELQLTKRKDLKVIVMSATLQADLFSK 242
E+M + L +Y II+D+ HER+I TD++LG LK++ L R +LK+I+ S+ +
Sbjct: 169 EMMSNPFLGSYGVIILDDIHERSIATDVLLGLLKDV-LLARPELKLIINSSPHLISKLNS 227
Query: 243 FFSNAPILFVEGRKFKVDRYYLPRPCEDIVDSVVRCSVQLNSSETTGDILCFLPGQEEID 302
++ N P++ V+ K V+ YL +D +S++R +++ S GDI+ FL +++I+
Sbjct: 228 YYGNVPVIEVK-NKHPVEVVYLSEAQKDSFESILRLIFEIHHSGEKGDIVVFLACEQDIE 286
Query: 303 KAVAILNKIIPYLDESVPRITAYPLYAALPPKDQAKVFEPL-------KGFKRKIVLATN 355
K + + L+ + + PLY PK++ +F+PL + ++R++VL T+
Sbjct: 287 KVCETVYQ-GSNLNPDLGELVVVPLY----PKEKCSLFKPLDETEKRCQVYQRRVVLTTS 341
Query: 356 IAETSVTIPGVKYVIDCGLRKVKVWRHQLGLATLLTVPVSKASVAQRAGRAGRESSGKCF 415
E + V++VID G+ + KV+ ++ +L+ P+S++ R G SSGK F
Sbjct: 342 SGEFLIWSNSVRFVIDVGVERRKVYNPRIRANSLVMQPISQSQAEIRKQILGSSSSGKFF 401
Query: 416 RLFTEA-DYKQLPKQSESEITRCEITSPILMLKQYGVQDIVNWSWLEHPGKEAIISGLKE 474
L+TE K + +E+ +TS +L +K+ + + + ++ P E+++ L++
Sbjct: 402 CLYTEEFASKDMTPLKPAEMQEANLTSMVLFMKRIDIAGLGHCDFMNRPAPESLMQALED 461
Query: 475 LYELGALNEQGRVTDRGRKMALLPLAPHLSNVLIHAQETQVLPYVIDIVSCLSVENLVLN 534
L L AL+ G +++ G M+ PL P LS ++ + E + V+ I + ++ N +
Sbjct: 462 LDYLAALDNDGNLSEFGIIMSEFPLDPQLSKSILASCEFDCVDEVLTIAAMVTAPN-CFS 520
Query: 535 PLPEERDEVNERRRALCTLGSKHGDLIMLKELFDMYQ--SLQSNSE--KQEWCKQLCVSQ 590
+P +E T GD L ++ YQ +L S+SE ++WC+ ++
Sbjct: 521 HVPHGAEEA--ALTCWKTFLHPEGDHFTLISIYKAYQDTTLNSSSEYCVEKWCRDYFLNC 578
Query: 591 RGFKNVIKVREQLTGYMKRL---YNEPVEIKTKQDTL 624
+ +R +L +KR+ Y EP +K++TL
Sbjct: 579 SALRMADVIRAELLEIIKRIELPYAEPA-FGSKENTL 614
>SPCC895.09c [A] KOG0920 ATP-dependent RNA helicase A
Length = 1327
Score = 241 bits (616), Expect = 2e-63
Identities = 202/709 (28%), Positives = 337/709 (47%), Gaps = 97/709 (13%)
Query: 71 LKGRESLPVFQNKEKIVSHIKANPVTILIGETGSGKSTQIPQFLMDE-ISPMHKG--AIA 127
++ RE LP ++++ KI+ I+ + V ++ GETGSGKSTQ+ QF++D +S K +
Sbjct: 571 VREREKLPAWESRRKIMDAIQHSQVVVISGETGSGKSTQVVQFILDHYLSSGEKDLQTVV 630
Query: 128 VTQPRRVAAINLATRVAQEHGCRIGHEVGYSVRFDNKSHKTRTKLKYLTDGMLIRELMLD 187
TQPRR++AI+LA RVA E +G EVGYSV + KS T L++ T G+L+R +
Sbjct: 631 CTQPRRISAISLAERVAFERDTTVGKEVGYSVHGE-KSISKETLLEFCTTGLLLRRIQQH 689
Query: 188 KN--LSNYKCIIIDEAHERTILTDLILGFLKELQLTKRKDLKVIVMSATLQADLFSKFFS 245
LS C+++DE HER+I D++L LK L +++ +LKVI+MSAT+ +D F +F
Sbjct: 690 GLGFLSTLSCVVVDEVHERSIENDILLTLLK-LVISRIPNLKVILMSATVNSDTFKYYFG 748
Query: 246 NAPILFVEGRKFKVDRYYL----PRPCED-------------------IVDSVVRCSVQL 282
NA L + GR F + YY+ P+ ED ++ +V S+
Sbjct: 749 NAGHLHIHGRTFPIKDYYIEDFAPKLNEDDDEEDVPRRKKKEYEIDYHLISRLVS-SIDA 807
Query: 283 NSSETTGDILCFLPGQEEIDKAVAILNKIIPYLDESVPRITAYPLYAALPPKDQAKVFEP 342
++G IL FLPG I + + + + + PL+A+L +Q + F+
Sbjct: 808 ELGSSSGSILVFLPGVSNIARCIREIKS------KDGSKFEVLPLHASLNTSEQRRCFKT 861
Query: 343 LKGFKRKIVLATNIAETSVTIPGVKYVIDCGLRKVKVWRHQLGLATLLTVPVSKASVAQR 402
KRKI+ ATNIAETS+TI V VID G K + + L T S+A+ QR
Sbjct: 862 YT--KRKIICATNIAETSITIDDVVAVIDSGRVKQIDYDVERDLVTFKETWASRAACQQR 919
Query: 403 AGRAGRESSGKCFRLFTEA-DYKQLPKQSESEITRCEITSPIL--------------MLK 447
GRAGR G C++L+T + K + Q+ E+ R ++ L +
Sbjct: 920 RGRAGRVKKGICYKLYTRGFEEKGMLGQTPPEVLRTALSQVCLNVVPLVKRFSSAGNSVN 979
Query: 448 QYGVQDIVNWSWLEHPGKEAIISGLKELYELGALNEQGRVTDRGRKMALLPLAPHLSNVL 507
Q ++ +N S ++ P + LK+L ++GAL +T G + LP+ L +L
Sbjct: 980 QGSIKKFMN-SLIDPPNDATVDLALKKLIQVGALTVSEDLTGLGEYLVSLPIDLKLGKLL 1038
Query: 508 IHAQETQVLPYVIDIVSCLSVENLVLNPLPEERDEVNERRRALCTLGSKHGDLIMLKELF 567
+ L + I + LS ++ L +E E+ ++ GD++ ++
Sbjct: 1039 VFGSIFGYLEPALTITAILSTKSPFLG--DDEAREIRSKQ------SQGWGDVLADARVY 1090
Query: 568 -DMYQSLQSNSEKQ--EWCKQLCVSQRGFKNVIKVREQLTGYMKRLYNEPVEIKTKQDTL 624
+ + L++ K+ +WC+++ + + + + R +L+ + L ++ D
Sbjct: 1091 HNWLEILETRGVKKTVQWCEEMHLHYTTLQQIRQNRNELSEAAQLLELTTKKLTGNFDWY 1150
Query: 625 QPEE-DIATNLLQPPDIAGVLKCFLYGFVKNTAIGMPDKSFRTTPTG------------- 670
E + + L+ V+KC PDK F + +G
Sbjct: 1151 STENLTVLSTLIAAALSPNVVKCV-----------YPDKKFVASFSGSLEMEQEARLTKF 1199
Query: 671 -----EPISIHPSSMLFMNSGDEIGPCPAILYIEHVFTTKGYARSVSRI 714
+ + IHPSS +F+NS C + Y + V TTK + R+ + I
Sbjct: 1200 YDQNNQRLFIHPSSTMFVNS-PNASRCTFVAYEQKVETTKPFLRNCTPI 1247
>ECU10g0680 [A] KOG0923 mRNA splicing factor ATP-dependent RNA helicase
Length = 797
Score = 241 bits (616), Expect = 2e-63
Identities = 187/686 (27%), Positives = 331/686 (47%), Gaps = 87/686 (12%)
Query: 63 LKTRALRLLKGRESLPVFQNKEKIVSHIKANPVTILIGETGSGKSTQIPQFLMDEISPMH 122
L+ R + + R++LP++ K +IV ++ + V + G G GK+TQIPQFL +
Sbjct: 168 LENRRKDIEEYRKTLPIYYEKAEIVYAVRTSAVVFVTGAPGCGKTTQIPQFLYEGGLAAG 227
Query: 123 KGAIAVTQPRRVAAINLATRVAQEHGCRIGHEVGYSVRFDNKSHKTRTKLKYLTDGMLIR 182
K I VTQPRR++A ++++R+ +E + GY +++++ + + T++K +TDG+LI+
Sbjct: 228 K-MIGVTQPRRISATSISSRINEEMNENL---CGYKIKYES-TVTSETRIKVMTDGVLIK 282
Query: 183 ELMLDKNLSNYKCIIIDEAHERTILTDLILGFLKELQLTKRK---DLKVIVMSATLQADL 239
E+ D LS Y II+DE HER DL++ + + +R DLK+++MSAT AD
Sbjct: 283 EIQDDFLLSRYSVIIVDEVHERNTNIDLLISIIPRIMKVRRARGDDLKLVLMSATGDADE 342
Query: 240 FSKFFSNAPILFVEGRKFKVDRYYLPRPCEDIVDSVVRC--SVQLNSS------------ 285
F F + + ++F+V +Y + D +D+ + L+SS
Sbjct: 343 FKAFLGDVTVFVCPEKRFRVSTFYEEKTEADYLDAAYERVKKIVLSSSGARKRRRVREGR 402
Query: 286 ----------ETTGDILCFLPGQEEIDKAVAILNKIIPYLDESVPRITAYPLYAALPPKD 335
+ + IL FL ++EI ++ L++S IT PL+++L +
Sbjct: 403 SDIIGSEVLNDKSASILVFLTSKQEI-------YQLKSRLEDSGMDITVLPLHSSLSKSE 455
Query: 336 QAKVFEPLKGFKRKIVLATNIAETSVTIPGVKYVIDCGLRKVKVWRHQLGLATLLTVPVS 395
Q VF+ + RK++LATNIAETS+TIP V +V+D G K ++ + G+ ++
Sbjct: 456 QKLVFDKMPN--RKVILATNIAETSITIPDVVFVVDSGKVKNRLVDSE-GVTKYSIDFIT 512
Query: 396 KASVAQRAGRAGRESSGKCFRLFTEADYKQLPKQSESEITRCEITSPILMLKQYGVQDIV 455
K++ QR GRAGR G C+RL++ Y++ + + +I R + +L L G++DI
Sbjct: 513 KSNAIQRTGRAGRTGPGVCYRLYSGEAYERFYESMKPQILREPLDGVVLNLLSLGIRDIY 572
Query: 456 NWSWLEHPGKEAIISGLKELYELGALNEQGRVTDRGRKMALLPLAPHLSNVLIHAQETQV 515
++ +L PG +I + + L LGA+++ ++T G+KM+ P+ P L+ +L +
Sbjct: 573 SFPFLSKPGTTSINNAIARLQGLGAVDKDLKLTGTGKKMSRYPVEPRLARLLCAQGLDDI 632
Query: 516 LPYVIDIVSCLSVENLVLNPLPEERDEVNERRRALCTLGSKHGDLIMLKELFDMYQSLQS 575
+I +VS L+ + R+ N+R GSK L+ L +Y
Sbjct: 633 STEIIVLVS------LISSGAEVRRNHSNKRYFE----GSKSDFLVQL----SIYSDFLK 678
Query: 576 NSEKQEWCKQLCVSQRGFKNVIKVREQLTGYMKRLYNEPVEIKTKQDTLQPEEDIATNLL 635
+ ++ +CK++ +S +K +TGY+ + + D L
Sbjct: 679 SKSRKAFCKEMGMSYTTAVEAMK----MTGYLMNISGGTADRNVSLD------------L 722
Query: 636 QPPDIAGVLKCFLYGFVKNTAIGMPDKSFRTTPTGEPISIHPSSMLFMNSGDEIGPCPA- 694
P + GFV + AI F T + S D I C
Sbjct: 723 SPDTCLKIRNIIYRGFVDHLAIPSSGSHFFRTEE------------VLASRDSISVCNGD 770
Query: 695 ILYIEHVFTTKG--YARSVSRIELAW 718
+ E + ++KG Y ++++ +E AW
Sbjct: 771 FVVFESLVSSKGKLYMKNITAVEEAW 796
>Hs18497286 [A] KOG0920 ATP-dependent RNA helicase A
Length = 1008
Score = 241 bits (615), Expect = 3e-63
Identities = 197/703 (28%), Positives = 326/703 (46%), Gaps = 90/703 (12%)
Query: 55 LDHVSNKELKTRALRLLKGRESLPVFQNKEKIVSHIKANPVTILIGETGSGKSTQIPQFL 114
L+ + K+ R + + RE LP + ++++V+ I + VT++ GETG GK+TQ+ QF+
Sbjct: 185 LEDLQKKKNDLRYIEMQHFREKLPSYGMQKELVNLIDNHQVTVISGETGCGKTTQVTQFI 244
Query: 115 MDEISPMHKGA---IAVTQPRRVAAINLATRVAQEHG--CRIGHEVGYSVRFDNKSHKTR 169
+D KG+ I TQPRR++AI++A RVA E C G+ GY +R ++ + +
Sbjct: 245 LDNYIERGKGSACRIVCTQPRRISAISVAERVAAERAESCGSGNSTGYQIRLQSRLPRKQ 304
Query: 170 TKLKYLTDGMLIRELMLDKNLSNYKCIIIDEAHERTILTDLILGFLKELQLTKRKDLKVI 229
+ Y T G++++ L D LS+ I++DE HER + +D+++ +K+L L R DLKVI
Sbjct: 305 GSILYCTTGIILQWLQSDPYLSSVSHIVLDEIHERNLQSDVLMTVVKDL-LNFRSDLKVI 363
Query: 230 VMSATLQADLFSKFFSNAPILFVEGRKFKVDRY----------YLPRPCE---------- 269
+MSATL A+ FS++F N P++ + G F V Y Y+P E
Sbjct: 364 LMSATLNAEKFSEYFGNCPMIHIPGFTFPVVEYLLEDVIEKIRYVPEQKEHRCQFKRGFM 423
Query: 270 ------------------------------------DIVDSVVRCSVQLNS--------- 284
D+++ + V LN
Sbjct: 424 QGHVNRQEKEEKEAIYKERWPDYVRELRRRYSASTVDVIEMMEDDKVDLNLIVALIRYIV 483
Query: 285 -SETTGDILCFLPGQEEIDKAVAILNKIIPYLDESVPRITAYPLYAALPPKDQAKVFEPL 343
E G IL FLPG + I +L + + + + PL++ +P +Q +VF+
Sbjct: 484 LEEEDGAILVFLPGWDNISTLHDLLMSQVMFKSD---KFLIIPLHSLMPTVNQTQVFKRT 540
Query: 344 KGFKRKIVLATNIAETSVTIPGVKYVIDCGLRKVKVWRHQLGLATLLTVPVSKASVAQRA 403
RKIV+ATNIAETS+TI V YVID G K + Q ++T+ VSKA+ QR
Sbjct: 541 PPGVRKIVIATNIAETSITIDDVVYVIDGGKIKETHFDTQNNISTMSAEWVSKANAKQRK 600
Query: 404 GRAGRESSGKCFRLFTEADYKQLPKQSESEITRCEITSPILMLKQYGVQDIVNW--SWLE 461
GRAGR G C+ L+ L EI R + L +K + I + ++
Sbjct: 601 GRAGRVQPGHCYHLYNGLRASLLDDYQLPEILRTPLEELCLQIKILRLGGIAYFLSRLMD 660
Query: 462 HPGKEAIISGLKELYELGALNEQGRVTDRGRKMALLPLAPHLSNVLIHAQETQVLPYVID 521
P EA++ ++ L EL AL++Q +T G +A LP+ PH+ +++ L V+
Sbjct: 661 PPSNEAVLLSIRHLMELNALDKQEELTPLGVHLARLPVEPHIGKMILFGALFCCLDPVLT 720
Query: 522 IVSCLSVENLVLNPLPEERDEVNERRRALCTLGSKHGDLIMLKELFDMYQSLQSNSEKQE 581
I + LS ++ + PL +E+ + RR+ L D + + F+ ++ + + E
Sbjct: 721 IAASLSFKDPFVIPLGKEK-IADARRKELAK--DTRSDHLTVVNAFEGWEEARRRGFRYE 777
Query: 582 WCKQLCVSQRGFKNVIKVREQLTG-YMKRLYNEPVEIKTKQDTLQPEEDIATNLLQPPDI 640
K C N +++ + G + + L + ++ PE +I N I
Sbjct: 778 --KDYCWEYFLSSNTLQMLHNMKGQFAEHLLG--AGFVSSRNPKDPESNI--NSDNEKII 831
Query: 641 AGVLKCFLYGFVKNTAIGMPDKSFRT---TPTGEPISIHPSSM 680
V+ LY V + + K T T +++HP S+
Sbjct: 832 KAVICAGLYPKVAKIRLNLGKKRKMVKVYTKTDGLVAVHPKSV 874
>YLR419w [A] KOG0920 ATP-dependent RNA helicase A
Length = 1435
Score = 238 bits (606), Expect = 3e-62
Identities = 187/608 (30%), Positives = 300/608 (48%), Gaps = 83/608 (13%)
Query: 74 RESLPVFQNKEKIVSHIKANPVTILIGETGSGKSTQIPQFLMD----EISPMHKGAIAVT 129
RE LP ++ ++ I+ I N V ++ GETGSGKSTQ+ QF++D E K I T
Sbjct: 601 REQLPAWKKQKVIIDIINKNEVVLITGETGSGKSTQVVQFILDFLQKEKGDFGKTKIVCT 660
Query: 130 QPRRVAAINLATRVAQEHGCRIGHEVGYSVRFDNKSHKTRTKLKYLTDGMLIRELMLDKN 189
QPRR++AI LA RV+ E G EVGY +R NK+ K T++K++T G+L+R L +
Sbjct: 661 QPRRISAIGLAERVSDERCVTCGEEVGYVIRGVNKT-KASTRIKFMTTGVLVRLLQNART 719
Query: 190 LSNYKCIIIDEAHERTILTDLILGFLKELQLTKRKDLKVIVMSATLQADLFSKFFSNAPI 249
+ ++IDE HER+I TDLI+ +K L L + + +K+++MSAT+ DLF KFF
Sbjct: 720 MLENTIVVIDEVHERSIDTDLIVTLMKNL-LHRVRGMKIVLMSATVNVDLFKKFFPGLAT 778
Query: 250 LFVEGRKFKVDRYYLPRPCEDIVDSVVR-------------------------------- 277
+EGR F + Y+L D+ + R
Sbjct: 779 CHIEGRTFPITDYFLEDILSDLDFKIKREKALSYDDDSVDERNNDDQYLKPRADSKFFTS 838
Query: 278 --------CSV------QLNSSETTGDILCFLPGQEEIDKAVAILNKIIPYLDESVPRIT 323
C V +L ++ G I+ FLPG EI+K +L D V
Sbjct: 839 GQINYDLLCQVVEYVHKRLKAANDNGSIIVFLPGVGEINKCCNLLANKSNEADFMV---- 894
Query: 324 AYPLYAALPPKDQAKVFEPLKGFKRKIVLATNIAETSVTIPGVKYVIDCGLRKVKVWRHQ 383
PL++AL P+DQ +VF+ G KRK+V++TNIAETS+TI ID G K + +
Sbjct: 895 -LPLHSALTPEDQKRVFKKYHG-KRKVVVSTNIAETSITIDDCVATIDTGRAKSMFYNPK 952
Query: 384 LGLATLLTVPVSKASVAQRAGRAGRESSGKCFRLFTEADYK-QLPKQSESEITRCEITSP 442
L+ +SKA V QR GRAGR G ++LF++ Y+ + EI R + S
Sbjct: 953 DNTTKLIESFISKAEVKQRRGRAGRVREGLSYKLFSKNLYENDMISMPIPEIKRIPLESL 1012
Query: 443 ILMLKQYGVQDIVNW--SWLEHPGKEAIISGLKELYELGALNEQGR-VTDRGRKMALLPL 499
L +K G++D+ + + L+ P A+ + L +G ++E + +T G+ ++L+P
Sbjct: 1013 YLSVKAMGIKDVKAFLSTALDAPPLPALQKAERILTTIGLVDESDKSLTQLGQFISLMP- 1071
Query: 500 APHLSNVLIHAQETQVLPYVI----DIVSCLSVENLVLNPLP-----EERDEVNERRRAL 550
++ ++ ++L Y I +S L V L + LP E R+++ ++ L
Sbjct: 1072 -------VMDSKHGKLLIYGILFGCTDISVLLVSILGIGVLPFIGGFENREKI---KKLL 1121
Query: 551 CTLGSKHGDLIMLKELFDMYQSLQSNSEKQEWCKQLCVSQRGFKNVIKVREQLTGYMKRL 610
C S+ GDL + E+ Y ++ +S K+++ + +S + Q +K +
Sbjct: 1122 CKYESR-GDLFAVLEIVRDYFKIKDSSIKRKYLRDNLLSYNKINEIKSSTAQYYSILKDV 1180
Query: 611 YNEPVEIK 618
P++ K
Sbjct: 1181 GFLPMDYK 1188
>7293336 [A] KOG0920 ATP-dependent RNA helicase A
Length = 976
Score = 233 bits (593), Expect = 1e-60
Identities = 175/587 (29%), Positives = 296/587 (49%), Gaps = 62/587 (10%)
Query: 74 RESLPVFQNKEKIVSHIKANPVTILIGETGSGKSTQIPQFLMDEISPMHKG--AIAVTQP 131
R SLP+++ +E I++ ++ + V I+ G TGSGKSTQ+PQ+++ E + H+ I V+QP
Sbjct: 206 RRSLPIYKQRESILNVLQRDQVLIIKGATGSGKSTQLPQYIL-EWAAEHRAPVRIVVSQP 264
Query: 132 RRVAAINLATRVAQEHGCRIGHEVGYSVRFDNKSHKTRTKLKYLTDGMLIRELMLDKN-- 189
RR+AAI+++ R+++E G G VGY++R N+ + T L T G L+R L +DK
Sbjct: 265 RRIAAISVSERISKERGEAPGTTVGYNIRM-NRQCSSNTVLMLTTSGCLLRALAMDKKSF 323
Query: 190 LSNYKCIIIDEAHERTILTDLILGFLKELQLTKRKDLKVIVMSATLQADLFSKFFSNAPI 249
N +IIDEAHER + TD +L +L+L K L++++MSAT+ + S +F +
Sbjct: 324 FKNTTHLIIDEAHERDLDTDFLL-LATKLELQKNPHLRLVLMSATMDLEALSNYFGGGTV 382
Query: 250 LFVEGRKFKVDRYYL-----------PR-------------PCEDIV------------- 272
+ VEGR F+V Y+L PR P E +
Sbjct: 383 MDVEGRSFEVSIYHLEDILSKTGYMHPRMEKFLGKPTGKETPSELLAAYYGGNTIVHPDI 442
Query: 273 --DSVVRCSVQLNSSETTGDILCFLPGQEEIDKAVAILNKIIPYLDESVPR--ITAYPLY 328
D +V L G ++ +LPG + + ++ L+ S+PR IT L+
Sbjct: 443 DNDLIVSLLELLLRQGDAGAVIVYLPGYSD-------MTSLLARLESSLPREQITIILLH 495
Query: 329 AALPPKDQAKVFEPLKGFKRKIVLATNIAETSVTIPGVKYVIDCGLRKVKVWRHQLGLAT 388
+ + +Q KVF G + KI+L+TNI +TS+TIP + YVID GL K+K + + +
Sbjct: 496 SQVDNSEQRKVFRTYPGVRLKIILSTNIGQTSITIPDLLYVIDTGLAKMKTYDSTIDASQ 555
Query: 389 LLTVPVSKASVAQRAGRAGRESSGKCFRLFTEADYKQLPKQSESEITRCEITSPILMLKQ 448
L +S+A QRAGRAGR G C+RL+ ++ + EI R + L+ K
Sbjct: 556 LTLTWISQADAKQRAGRAGRVCHGNCYRLYDNDRMARMNLYTIPEIMRRTLDEICLLTKL 615
Query: 449 YGV-QDIVNW--SWLEHPGKEAIISGLKELYELGALNEQGRVTDRGRKMALLPLAPHLSN 505
+ I N+ L+ P K+A++ L LG L+E+ VT G +A LPL +
Sbjct: 616 AAPDKKIENFLALALDTPPKDAVMQSCSRLKLLGVLDERDEVTPLGHIVAELPLGVQIGK 675
Query: 506 VLIHAQETQVLPYVIDIVSCLSVEN-LVLNPLPEERDEVNERRRALCTLGSKHGDLIMLK 564
L+++ + L +I I + SV + VLN E + ++ + G D + +
Sbjct: 676 CLVYSIYLRCLDSMIIIAAYHSVRDPFVLN--IERGKKSGQQISRVLFAGDGMSDSLAVI 733
Query: 565 ELFDMYQSLQSNSEKQEWCKQLCVSQRGFKNVIKVREQLTGYMKRLY 611
+L++ + +L+ + ++C++ + + + + L + R++
Sbjct: 734 KLYEEFTNLK-RKDIGDFCERNFICRNAMEMFVSAASTLRDTVYRIF 779
>Hs4503297 [K] KOG0921 Dosage compensation complex subunit MLE
Length = 1279
Score = 228 bits (580), Expect = 3e-59
Identities = 196/705 (27%), Positives = 326/705 (45%), Gaps = 84/705 (11%)
Query: 70 LLKGRESLPVFQNKEKIVSHIKANPVTILIGETGSGKSTQIPQFLMDEISPMHKGA---I 126
+L+ RE LPV + + +I+ I N V I+ G TG GK+TQ+PQF++D+ + A I
Sbjct: 381 ILQERELLPVKKFESEILEAISQNSVVIIRGATGCGKTTQVPQFILDDFIQNDRAAECNI 440
Query: 127 AVTQPRRVAAINLATRVAQEHGCRIGHEVGYSVRFDNKSHKTRTKLKYLTDGMLIRELML 186
VTQPRR++A+++A RVA E G G GYSVRF++ + + + T G+L+R+ L
Sbjct: 441 VVTQPRRISAVSVAERVAFERGEEPGKSCGYSVRFESVLPRPHASIMFCTVGVLLRK--L 498
Query: 187 DKNLSNYKCIIIDEAHERTILTDLILGFLKELQLTKRKDLKVIVMSATLQADLFSKFFSN 246
+ + +I+DE HER I T +L L+++ + +++++ MSAT+ +F ++F N
Sbjct: 499 EAGIRGISHVIVDEIHERDINTSFLLVVLRDV-VQAYPEVRIVFMSATIDTSMFCEYFFN 557
Query: 247 APILFVEGRKFKVDRYYL----------PRP-----------------------CEDIVD 273
P L + R + V Y+L P P C D
Sbjct: 558 CPSLKL-WRTYPVQEYFLEDCIQMTHFVPPPKDKKKKDKDDDGGEDDDANCNLICGDEYG 616
Query: 274 SVVRCSV-QLNSSET-----------------TGDILCFLPGQEEIDKAVAILNKIIPYL 315
R S+ QLN ET G +L FLPG I L ++ P+
Sbjct: 617 PETRLSMSQLNEKETPFELIEALLKYIETLNVPGAVLVFLPGWNLIYTMQKHL-EMNPHF 675
Query: 316 DESVPRITAYPLYAALPPKDQAKVFEPLKGFKRKIVLATNIAETSVTIPGVKYVIDCGLR 375
R PL++ +P ++Q KVF+P+ K++L+TNIAETS+TI V YVID +
Sbjct: 676 GSH--RYQILPLHSQIPREEQRKVFDPVPVGVTKVILSTNIAETSITINDVVYVIDSCKQ 733
Query: 376 KVKVWRHQLGLATLLTVPVSKASVAQRAGRAGRESSGKCFRLFTEADYKQLPKQSESEIT 435
KVK++ + TV SK ++ QR GRAGR ++G CF L + A +++L E+
Sbjct: 734 KVKLFTAHNNMTNYSTVWASKTNLEQRKGRAGRSTAGFCFHLCSRARFERLETHMTPEMF 793
Query: 436 RC---EITSPILMLKQYGVQDIVNWSWLEHPGKEAIISGLKELYELGALNEQGRVTDRGR 492
R EI I +L+ G+ + + +E P +A+I L EL AL+ +T GR
Sbjct: 794 RTPLHEIALSIKLLRLGGIGQFLAKA-IEPPPLDAVIEAEHTLRELDALDANDELTPLGR 852
Query: 493 KMALLPLAPHLSNVLIHAQETQVLPYVIDIVSCLSVENLVLNPLPEERDEVNERRRALCT 552
+A LP+ P ++I + YV D + ++ P E ++ R
Sbjct: 853 ILAKLPIEPRFGKMMIMG----CIFYVGDAICTIAAATCFPEPFVNEGKQLGYIHRNFA- 907
Query: 553 LGSKHGDLIMLKELFDMYQSLQSNSEKQE--WCKQLCVSQRGFKNVIKVREQLTGYMKRL 610
G++ D + L +F + + E+ E +C+ ++ + + + QL +
Sbjct: 908 -GNRFSDHVALLSVFQAWDDARMGGEEAEIRFCEHKRLNMATLRMTWEAKVQLKEIL--- 963
Query: 611 YNEPVEIKTKQDTLQPEEDIATNLLQPPDIAGVLKCFLYGFVKNTAIGMPDKSFRTTPTG 670
+ +D L + + TN ++ V+ +G N + TT G
Sbjct: 964 ----INSGFPEDCLLTQ--VFTNTGPDNNLDVVISLLAFGVYPNVCYHKEKRKILTT-EG 1016
Query: 671 EPISIHPSSMLFMNSGDEIG-PCPAILYIEHVFTTKGYARSVSRI 714
IH SS+ S ++ P P ++ E + T A+ ++ +
Sbjct: 1017 RNALIHKSSVNCPFSSQDMNYPSPFFVFGEKIRTRAISAKGMTLV 1061
>Hs22041930 [A] KOG0920 ATP-dependent RNA helicase A
Length = 1035
Score = 224 bits (572), Expect = 3e-58
Identities = 148/478 (30%), Positives = 255/478 (52%), Gaps = 31/478 (6%)
Query: 77 LPVFQNKEKIVSHIKANPVTILIGETGSGKSTQIPQFLMDEISPMHKGA---IAVTQPRR 133
LPV +++ I++ I+ +PV ++ G+TG GK+T+IPQ L++ +GA + +TQPRR
Sbjct: 275 LPVDPHRDTILNAIEQHPVVVISGDTGCGKTTRIPQLLLERYVTEGRGARCNVIITQPRR 334
Query: 134 VAAINLATRVAQEHGCRIGHEVGYSVRFDNKSHKTRTKLKYLTDGMLIRELMLDKNLSNY 193
++A+++A RV+ E G + VG+ VR ++K L + T G+L+R+L + +L
Sbjct: 335 ISAVSVAQRVSHELGPSLRRNVGFQVRLESKPPSRGGALLFCTVGILLRKLQSNPSLEGV 394
Query: 194 KCIIIDEAHERTILTDLILGFLKELQLTKRKDLKVIVMSATLQADLFSKFFSNAPILFVE 253
+I+DE HER + TD +L LK LQ L++++MSAT + FS++F P++ V
Sbjct: 395 SHVIVDEVHERDVNTDFLLILLKGLQRLNPA-LRLVLMSATGDNERFSRYFGGCPVIKVP 453
Query: 254 GRKFKVDRYYLPR---------------------PCEDIVDSVVRCSVQLNSSETTGDIL 292
G + V +YL C +D V + +++ G IL
Sbjct: 454 GFMYPVKEHYLEDILAKLGKHQYLHRHRHHESEDECALDLDLVTDLVLHIDARGEPGGIL 513
Query: 293 CFLPGQEEIDKAVAILNKIIPYLDESVPRITAYPLYAALPPKDQAKVFEPLKGFKRKIVL 352
CFLPG +EI + ++ L + P+++ +P DQ +F+ RKIVL
Sbjct: 514 CFLPGWQEIK---GVQQRLQEALGMHESKYLILPVHSNIPMMDQKAIFQQPPVGVRKIVL 570
Query: 353 ATNIAETSVTIPGVKYVIDCGLRKVKVWRHQLGLATLLTVPVSKASVAQRAGRAGRESSG 412
ATNIAETS+TI + +V+D GL K + + + ++ L TV VS+A+V QR GRAGR SG
Sbjct: 571 ATNIAETSITINDIVHVVDSGLHKEERYDLKTKVSCLETVWVSRANVIQRRGRAGRCQSG 630
Query: 413 KCFRLFTEADYKQLPKQSESEITRCEITSPILMLKQYGVQDIV---NWSWLEHPGKEAII 469
+ LF + +++ EI R + + +L K + + ++ P +A+
Sbjct: 631 FAYHLFPRSRLEKMVPFQVPEILRTPLENLVLQAKIHMPEKTAVEFLSKAVDSPNIKAVD 690
Query: 470 SGLKELYELGALNEQGRVTDRGRKMALLPLAPHLSNVLIHAQETQVLPYVIDIVSCLS 527
+ L E+G L+++ +T G+++A + P L+ ++ A + L ++ +VSCL+
Sbjct: 691 EAVILLQEIGVLDQREYLTTLGQRLAHISTDPRLAKAIVLAAIFRCLHPLLVVVSCLT 748
>Hs20336294 [A] KOG0920 ATP-dependent RNA helicase A
Length = 1194
Score = 224 bits (572), Expect = 3e-58
Identities = 148/478 (30%), Positives = 255/478 (52%), Gaps = 31/478 (6%)
Query: 77 LPVFQNKEKIVSHIKANPVTILIGETGSGKSTQIPQFLMDEISPMHKGA---IAVTQPRR 133
LPV +++ I++ I+ +PV ++ G+TG GK+T+IPQ L++ +GA + +TQPRR
Sbjct: 434 LPVDPHRDTILNAIEQHPVVVISGDTGCGKTTRIPQLLLERYVTEGRGARCNVIITQPRR 493
Query: 134 VAAINLATRVAQEHGCRIGHEVGYSVRFDNKSHKTRTKLKYLTDGMLIRELMLDKNLSNY 193
++A+++A RV+ E G + VG+ VR ++K L + T G+L+R+L + +L
Sbjct: 494 ISAVSVAQRVSHELGPSLRRNVGFQVRLESKPPSRGGALLFCTVGILLRKLQSNPSLEGV 553
Query: 194 KCIIIDEAHERTILTDLILGFLKELQLTKRKDLKVIVMSATLQADLFSKFFSNAPILFVE 253
+I+DE HER + TD +L LK LQ L++++MSAT + FS++F P++ V
Sbjct: 554 SHVIVDEVHERDVNTDFLLILLKGLQRLNPA-LRLVLMSATGDNERFSRYFGGCPVIKVP 612
Query: 254 GRKFKVDRYYLPR---------------------PCEDIVDSVVRCSVQLNSSETTGDIL 292
G + V +YL C +D V + +++ G IL
Sbjct: 613 GFMYPVKEHYLEDILAKLGKHQYLHRHRHHESEDECALDLDLVTDLVLHIDARGEPGGIL 672
Query: 293 CFLPGQEEIDKAVAILNKIIPYLDESVPRITAYPLYAALPPKDQAKVFEPLKGFKRKIVL 352
CFLPG +EI + ++ L + P+++ +P DQ +F+ RKIVL
Sbjct: 673 CFLPGWQEIK---GVQQRLQEALGMHESKYLILPVHSNIPMMDQKAIFQQPPVGVRKIVL 729
Query: 353 ATNIAETSVTIPGVKYVIDCGLRKVKVWRHQLGLATLLTVPVSKASVAQRAGRAGRESSG 412
ATNIAETS+TI + +V+D GL K + + + ++ L TV VS+A+V QR GRAGR SG
Sbjct: 730 ATNIAETSITINDIVHVVDSGLHKEERYDLKTKVSCLETVWVSRANVIQRRGRAGRCQSG 789
Query: 413 KCFRLFTEADYKQLPKQSESEITRCEITSPILMLKQYGVQDIV---NWSWLEHPGKEAII 469
+ LF + +++ EI R + + +L K + + ++ P +A+
Sbjct: 790 FAYHLFPRSRLEKMVPFQVPEILRTPLENLVLQAKIHMPEKTAVEFLSKAVDSPNIKAVD 849
Query: 470 SGLKELYELGALNEQGRVTDRGRKMALLPLAPHLSNVLIHAQETQVLPYVIDIVSCLS 527
+ L E+G L+++ +T G+++A + P L+ ++ A + L ++ +VSCL+
Sbjct: 850 EAVILLQEIGVLDQREYLTTLGQRLAHISTDPRLAKAIVLAAIFRCLHPLLVVVSCLT 907
>Hs20336290 [A] KOG0920 ATP-dependent RNA helicase A
Length = 1155
Score = 224 bits (572), Expect = 3e-58
Identities = 148/478 (30%), Positives = 255/478 (52%), Gaps = 31/478 (6%)
Query: 77 LPVFQNKEKIVSHIKANPVTILIGETGSGKSTQIPQFLMDEISPMHKGA---IAVTQPRR 133
LPV +++ I++ I+ +PV ++ G+TG GK+T+IPQ L++ +GA + +TQPRR
Sbjct: 395 LPVDPHRDTILNAIEQHPVVVISGDTGCGKTTRIPQLLLERYVTEGRGARCNVIITQPRR 454
Query: 134 VAAINLATRVAQEHGCRIGHEVGYSVRFDNKSHKTRTKLKYLTDGMLIRELMLDKNLSNY 193
++A+++A RV+ E G + VG+ VR ++K L + T G+L+R+L + +L
Sbjct: 455 ISAVSVAQRVSHELGPSLRRNVGFQVRLESKPPSRGGALLFCTVGILLRKLQSNPSLEGV 514
Query: 194 KCIIIDEAHERTILTDLILGFLKELQLTKRKDLKVIVMSATLQADLFSKFFSNAPILFVE 253
+I+DE HER + TD +L LK LQ L++++MSAT + FS++F P++ V
Sbjct: 515 SHVIVDEVHERDVNTDFLLILLKGLQRLNPA-LRLVLMSATGDNERFSRYFGGCPVIKVP 573
Query: 254 GRKFKVDRYYLPR---------------------PCEDIVDSVVRCSVQLNSSETTGDIL 292
G + V +YL C +D V + +++ G IL
Sbjct: 574 GFMYPVKEHYLEDILAKLGKHQYLHRHRHHESEDECALDLDLVTDLVLHIDARGEPGGIL 633
Query: 293 CFLPGQEEIDKAVAILNKIIPYLDESVPRITAYPLYAALPPKDQAKVFEPLKGFKRKIVL 352
CFLPG +EI + ++ L + P+++ +P DQ +F+ RKIVL
Sbjct: 634 CFLPGWQEIK---GVQQRLQEALGMHESKYLILPVHSNIPMMDQKAIFQQPPVGVRKIVL 690
Query: 353 ATNIAETSVTIPGVKYVIDCGLRKVKVWRHQLGLATLLTVPVSKASVAQRAGRAGRESSG 412
ATNIAETS+TI + +V+D GL K + + + ++ L TV VS+A+V QR GRAGR SG
Sbjct: 691 ATNIAETSITINDIVHVVDSGLHKEERYDLKTKVSCLETVWVSRANVIQRRGRAGRCQSG 750
Query: 413 KCFRLFTEADYKQLPKQSESEITRCEITSPILMLKQYGVQDIV---NWSWLEHPGKEAII 469
+ LF + +++ EI R + + +L K + + ++ P +A+
Sbjct: 751 FAYHLFPRSRLEKMVPFQVPEILRTPLENLVLQAKIHMPEKTAVEFLSKAVDSPNIKAVD 810
Query: 470 SGLKELYELGALNEQGRVTDRGRKMALLPLAPHLSNVLIHAQETQVLPYVIDIVSCLS 527
+ L E+G L+++ +T G+++A + P L+ ++ A + L ++ +VSCL+
Sbjct: 811 EAVILLQEIGVLDQREYLTTLGQRLAHISTDPRLAKAIVLAAIFRCLHPLLVVVSCLT 868
>ECU04g0250 [A] KOG0922 DEAH-box RNA helicase
Length = 608
Score = 222 bits (566), Expect = 1e-57
Identities = 199/660 (30%), Positives = 305/660 (46%), Gaps = 85/660 (12%)
Query: 76 SLPVFQNKEKIVSHIKANPVTILIGETGSGKSTQIPQFLMDEISPMHKGAIAVTQPRRVA 135
+LP+ + K+KI+S ++ + V I+ G TG GKST IP +L+ P + IAV +PRR+A
Sbjct: 7 NLPIEECKDKILSTVERSKVCIIKGPTGCGKSTYIP-YLLSSCFPSSR--IAVVEPRRIA 63
Query: 136 AINLATRVAQEHGCRIGHEVGYSVRFDNKSHKTRTKLKYLTDGMLIRELMLDKNLSNYKC 195
+L ++ VGY +RF NKS T+ TDG + E+ S +
Sbjct: 64 VTSLHKTLSSAM-----EGVGYKMRF-NKSVGKDTRTIIYTDGSFLNEI----GESEFDY 113
Query: 196 IIIDEAHERTILTDLILGFLKELQLTKRKDLKVIVMSATLQADLFSKFFSNAPILFVEGR 255
II+DE HER++ TD+ILG L+ K KVI+MSAT+ S++F A +L + G
Sbjct: 114 IIVDEVHERSVRTDIILGLLRSN--IKNIKGKVILMSATVDTAKVSRYFK-ADVLDIPGA 170
Query: 256 KFKVDRYYLPRPCED-IVDSVVRCSVQLNSSETTGD--------ILCFLPGQEEIDKAVA 306
V YLP D IV+S S E + D IL FLPG+E+I+
Sbjct: 171 GHPVKIEYLPECTSDYIVESYCIIKRIALSKEDSWDGFEPENKGILVFLPGEEDINDLYG 230
Query: 307 ILNKIIPYLDESVPRITAYPLYAALPPKDQAKVFEPLKGFKRKIVLATNIAETSVTIPGV 366
+L K+ P I Y +++AL K+Q+K++EP RK++L+TNI ETS+TIPG+
Sbjct: 231 LLRKL--------PAIRVYKIFSALSDKEQSKIYEPCS--LRKVILSTNICETSLTIPGI 280
Query: 367 KYVIDCGLRKVKVWRHQLGLATLLTVPVSKASVAQRAGRAGRESSGKCFRLFTEADYKQL 426
YV+D GL+KVK++ ++ L +SK S QR GR R G C+RL+TE Y L
Sbjct: 281 GYVLDSGLQKVKIYDQ---MSHLGIWSISKESADQRLGRCNRTGPGTCYRLYTENMYGTL 337
Query: 427 PKQSESEITRCEITSPILMLKQYGVQDIVNWSWLEHPGKEAIISGLKELYELGALNEQGR 486
P Q EI R +++ L+L Y ++ + + +L++P + IS L L E G ++
Sbjct: 338 PLQQSPEICRSDLSQAFLLLLSYR-KNPLRFEFLDYPTRANAISALSFLLEKGCISISSI 396
Query: 487 VTDRGRKMALLPLAPHLSNVLIHAQETQVLPYVIDIVSCLSVENLVLNPLPEERDEVNER 546
D L L++ L+ + V +P D++ +
Sbjct: 397 RED---------LRCCLNSSLVRH------------------DGAVPDPTELSLDDIRLK 429
Query: 547 RRALCTLGSKHGDLIMLKELFDM--------YQSLQSNSEKQEWCKQLCVSQRGFKNVIK 598
+H + L + S+ + Q+ C L + K I+
Sbjct: 430 ITRYGRTVLRHPFDVHLSHFYQQSLGRDVGYLASILVSLVSQDSCNFLKYKNKSQKTDIE 489
Query: 599 VREQL-TGYM----KRLYNEPVEIKTKQDTLQPEEDIATNLLQPPDIAGVLKCFLYGFVK 653
L GY+ K+ Y E+ K + A N + DI + + F +
Sbjct: 490 FLVCLFEGYLESEDKKQYCAKHEVGIKHMEIAKRIFSALNRKKDGDIEMIERVFSLAYQH 549
Query: 654 NTAIGMPDKSFRTTPTGEPISIHPSSMLFMNSGDEIGPCPAILYIEHVFTTKGYARSVSR 713
N M D S++ G + IHPSS F I++++ TTK YAR V R
Sbjct: 550 NLCERMKDGSYKHLRGGSVVWIHPSSCFFKRKD------RFIVFVDIFHTTKAYARVVGR 603
>7302201 [K] KOG0921 Dosage compensation complex subunit MLE
Length = 1293
Score = 217 bits (553), Expect = 4e-56
Identities = 159/503 (31%), Positives = 249/503 (48%), Gaps = 68/503 (13%)
Query: 69 RLLKGRESLPVFQNKEKIVSHIKANPVTILIGETGSGKSTQIPQFLMDEISPMHKGAIA- 127
+ L+ RE LP+ + +I++ I NPV I+ G TG GK+TQI Q+++D+ +G A
Sbjct: 376 QFLEFREKLPIAAMRSEILTAINDNPVVIIRGNTGCGKTTQIAQYILDDYICSGQGGYAN 435
Query: 128 --VTQPRRVAAINLATRVAQEHGCRIGHEVGYSVRFDNKSHKTRTKLKYLTDGMLIRELM 185
VTQPRR++AI++A RVA+E ++G VGYSVRF++ + + + T G+L+R+
Sbjct: 436 IYVTQPRRISAISVAERVARERCEQLGDTVGYSVRFESVFPRPYGAILFCTVGVLLRK-- 493
Query: 186 LDKNLSNYKCIIIDEAHERTILTDLILGFLKELQLTKRKDLKVIVMSATLQADLFSKFFS 245
L+ L II+DE HER + +D +L L+++ + DL VI+MSAT+ FSK+F
Sbjct: 494 LEAGLRGVSHIIVDEIHERDVNSDFLLVILRDM-VDTYPDLHVILMSATIDTTKFSKYFG 552
Query: 246 NAPILFVEGRKFKVDRYYLP---------------------------------------- 265
P+L V GR F V +++L
Sbjct: 553 ICPVLEVPGRAFPVQQFFLEDIIQMTDFVPSAESRRKRKEVEDEEQLLSEDKDEAEINYN 612
Query: 266 RPCEDIVDSVVR-CSVQLNSSETTGDI-----------------LCFLPGQEEIDKAVAI 307
+ CED R L+ S+ + ++ L FLPG I +
Sbjct: 613 KVCEDKYSQKTRNAMAMLSESDVSFELLEALLMHIKSKNIPGAILVFLPGWNLIFALMKF 672
Query: 308 LNKIIPYLDESVPRITAYPLYAALPPKDQAKVFEPLKGFKRKIVLATNIAETSVTIPGVK 367
L + D S +I P ++ +P +Q KVFEP+ KI+L+TNIAETS+TI +
Sbjct: 673 LQNTNIFGDTSQYQI--LPCHSQIPRDEQRKVFEPVPEGVTKIILSTNIAETSITIDDIV 730
Query: 368 YVIDCGLRKVKVWRHQLGLATLLTVPVSKASVAQRAGRAGRESSGKCFRLFTEADYKQLP 427
+VID ++K++ L + TV SK ++ QR GRAGR G CF L + A ++ L
Sbjct: 731 FVIDICKARMKLFTSHNNLTSYATVWASKTNLEQRKGRAGRVRPGFCFTLCSRARFQALE 790
Query: 428 KQSESEITRCEITSPILMLKQYGVQDIVNW--SWLEHPGKEAIISGLKELYELGALNEQG 485
E+ R + L +K + I ++ LE P +A+I L E+ L+
Sbjct: 791 DNLTPEMFRTPLHEMALTIKLLRLGSIHHFLSKALEPPPVDAVIEAEVLLREMRCLDAND 850
Query: 486 RVTDRGRKMALLPLAPHLSNVLI 508
+T GR +A LP+ P L +++
Sbjct: 851 ELTPLGRLLARLPIEPRLGKMMV 873
>SPBC15C4.05 [A] KOG0920 ATP-dependent RNA helicase A
Length = 1428
Score = 209 bits (531), Expect = 2e-53
Identities = 166/521 (31%), Positives = 259/521 (48%), Gaps = 70/521 (13%)
Query: 74 RESLPVFQNKEKIVSHIKANPVTILIGETGSGKSTQIPQFLMDEISPMHKGA-IAVTQPR 132
R LP +E I+ + + + I+ G+TG GKSTQIP FL++ + K I VT+PR
Sbjct: 628 RNQLPATMFRETIIDAVNNSQLLIISGDTGCGKSTQIPAFLLENSTKNGKAVKIYVTEPR 687
Query: 133 RVAAINLATRVAQEHG-----CRIGHEVGYSVRFDNKSHKTRTKLKYLTDGMLIRELMLD 187
R++AI+LA RV+QE G R VGYSVR D+K T L Y+T G +R L +
Sbjct: 688 RISAISLANRVSQELGGNPPSARSHELVGYSVRLDSKC-TPLTPLTYVTTGTFLRLLEVG 746
Query: 188 KNLSNYKCIIIDEAHERTILTDLILGFLKELQLTKRKDLKVIVMSATLQADLFSKFFSNA 247
+ + +IIDE HER+I +DL+L + L L + LK+I+MSATL A+ F +F +
Sbjct: 747 NEIESVTHLIIDEVHERSIDSDLLLIHVLHL-LKQHPHLKIIIMSATLNAEKFQLYFEGS 805
Query: 248 PILFVEGRKFKVDRYYLP-------------------------------------RPCED 270
++ + G+ + V R+YL + ED
Sbjct: 806 NLITIPGKTYPVHRFYLEDILSQFGNDKSFGNAAGQDVIEEDDYETDQQDASISNKSAED 865
Query: 271 IVDSVVRCSVQLNSSETTGDILCFL------PGQEEIDKAVAI----LNKI--IPYLDES 318
+ + N ++ +L G + K V + +++I + L E
Sbjct: 866 AIVEMNLIPAWYNEKAINYGLIVYLLKYIFTEGDPKFSKCVLVFLPGISEILRVKSLIED 925
Query: 319 VP------RITAYPLYAALPPKDQAKVFE-PLKGFKRKIVLATNIAETSVTIPGVKYVID 371
+P + Y L++ L Q VF P KG RKIVL+TNIAET VTIP V VID
Sbjct: 926 MPMFRNHRKFCIYMLHSTLSSAQQQSVFNIPPKGC-RKIVLSTNIAETGVTIPDVTCVID 984
Query: 372 CGLRKVKVWRHQLGLATLLTVPVSKASVAQRAGRAGRESSGKCFRLFTEADY-KQLPKQS 430
G+ + + + L+ L VSKA+ QR+GRAGR G C+ LF++ + Q
Sbjct: 985 TGVHREMRYNSRRHLSRLTDTFVSKANAKQRSGRAGRVQEGICYHLFSKFKHDTQFLSYQ 1044
Query: 431 ESEITRCEITSPILMLK--QYG-VQDIVNWSWLEHPGKEAIISGLKELYELGALNEQGRV 487
EI R + +L +K Q G VQD++ + L+ P II L++L+++GAL+E ++
Sbjct: 1045 TPEILRLNLQEVVLRVKMCQMGDVQDVLGKA-LDPPSSTNIIRALEKLHQVGALSENEKL 1103
Query: 488 TDRGRKMALLPLAPHLSNVLIHAQETQVLPYVIDIVSCLSV 528
T G+ ++ LP+ +L +L+ + + IV+ L++
Sbjct: 1104 TKLGKFLSQLPVDANLGKILVLGCFYKCVDAASSIVAMLTI 1144
>7300065 [A] KOG0920 ATP-dependent RNA helicase A
Length = 1434
Score = 206 bits (523), Expect = 1e-52
Identities = 170/584 (29%), Positives = 281/584 (48%), Gaps = 58/584 (9%)
Query: 75 ESLPVFQNKEKIVSHIKANPVTILIGETGSGKSTQIPQFLMDEISPMHKGA-IAVTQPRR 133
++L ++ +E+I++ I A+PV I+ GETG GK+TQ+PQ+++DE K I VTQPRR
Sbjct: 113 KNLSIYAKREEILAAINAHPVVIIKGETGCGKTTQVPQYILDEAYKSGKYCNIVVTQPRR 172
Query: 134 VAAINLATRVAQEHGCRIGHEVGYSVRFDNKSHKTRTKLKYLTDGMLIRELMLDKNLSNY 193
+AAI++A RV QE + + V + T+L Y T G+L+ L+ +K L++Y
Sbjct: 173 IAAISIANRVCQEREWQQNTVCSFQVGLHRPNSLEDTRLLYCTTGVLLNNLINNKTLTHY 232
Query: 194 KCIIIDEAHERTILTDLILGFLKELQLTKRKDLKVIVMSATLQADLFSKFFSNA----PI 249
I++DE HER D +L ++ L T + +K+I+MSAT+ A S +F+ P+
Sbjct: 233 THIVLDEVHERDQNMDFLLIVVRRLLATNSRHVKIILMSATIDAKELSDYFTTTNSIPPV 292
Query: 250 LFV-EGRKFKVDRYY------------------LPRPCEDIVDSVVRCSVQLNSSETT-- 288
+ RK ++++Y +P + + V+ V +++ E
Sbjct: 293 ITTNHRRKHSIEKFYRDQLGSIIWNEEDVGHQQVPEINKHGYRAAVKIIVIIDNMERKAA 352
Query: 289 -------------GDILCFLPGQEEIDKAVAILNKIIPYLDESVPRITAYPLYAALPPKD 335
G +L FLPG EID L ++ ++ +++ ++ + P++
Sbjct: 353 IQSRQSYDEALRYGAVLIFLPGIYEIDTMAENLTCMLE--NDPNIKVSIVRCFSLMTPEN 410
Query: 336 QAKVFEPLKGFKRKIVLATNIAETSVTIPGVKYVIDCGLRKVKVWRHQLGLATLLTVPVS 395
Q VF P RKI+L TNIAE+S+T+P V YVID L KVKV ++L S
Sbjct: 411 QRDVFNPPPPGFRKIILTTNIAESSITVPDVSYVIDFCLAKVKVTDTASSFSSLRLTWAS 470
Query: 396 KASVAQRAGRAGRESSGKCFRLFTEADY-KQLPKQSESEITRCEITSPILMLKQYGVQDI 454
KA+ QRAGR GR SG+ +R+ + Y +++P+ E+ R + + +L K +
Sbjct: 471 KANCRQRAGRVGRLRSGRVYRMVNKHFYQREMPEFGIPEMLRLPLQNSVLKAKVLNMGSP 530
Query: 455 VN--WSWLEHPGKEAIISGLKELYELGAL---------NEQGRVTDRGRKMALLPLAPHL 503
V L P I + + L E+GAL G +T G M+ LPL
Sbjct: 531 VEILALALSPPNLSDIHNTILLLKEVGALYLTVDGIYDPLDGDLTYWGTIMSRLPLDTRQ 590
Query: 504 SNVLIHAQETQVLPYVIDIVSCLSVENLVLNPLPEERDEVNERRRALCTLGSKHGDLIML 563
S ++I +L I I + LS L + + + + + GS DL+ +
Sbjct: 591 SRLIILGYIFNMLEEAIIIAAGLSTPGLFAHEGGRSQLGDSFWMHYIFSDGS-GSDLVAI 649
Query: 564 KELFDMYQSLQSNSEKQE----WCKQLCVSQRGFKNVIKVREQL 603
++ Y ++ N QE W K+ VS R K + + ++L
Sbjct: 650 WRVYLTYLNIVENGHDQESAIRWAKRFHVSLRSLKEIHLLVQEL 693
>Hs18559453 [A] KOG0920 ATP-dependent RNA helicase A
Length = 965
Score = 201 bits (510), Expect = 4e-51
Identities = 182/700 (26%), Positives = 320/700 (45%), Gaps = 106/700 (15%)
Query: 4 KSKAVQDRQNGKSIGKKKSNANPLKRHAGKKTVVTFXXXXXXXXXXXXXEALDHVSNKEL 63
K K Q +Q S K++++ +P + + F E + ++ K
Sbjct: 94 KLKQQQQQQQQHSENKRENSEDPEESWENLVSDEDFSALSLESANVEDLEPVRNLFRKLQ 153
Query: 64 KT-RALRLLKGRESLPVFQNKEKIVSHIKANPVTILIGETGSGKSTQIPQFLMDEIS--- 119
T + +LLK R+ LPVF++++ IV +K + V ++ GETGSGKSTQ+P FL++++
Sbjct: 154 STPKYQKLLKERQQLPVFKHRDSIVETLKRHRVVVVAGETGSGKSTQVPHFLLEDLLLNE 213
Query: 120 -PMHKGAIAVTQPRRVAAINLATRVAQEHGCRIG-----HEVGYSVRFDNKSHKTRTKLK 173
K I TQPRR++A++LA RV E GC G GY +R ++++ ++ T+L
Sbjct: 214 WEASKCNIVCTQPRRISAVSLANRVCDELGCENGPGGRNSLCGYQIRMESRACES-TRLL 272
Query: 174 YLTDGMLIRELMLDKNLSNYKCIIIDEAHERTILTDLILGFLKELQLTKRKDLKVIVMSA 233
Y T G+L+R+L D LSN +I+DE HER++ +D +L LKE+ L KR DL +I+MSA
Sbjct: 273 YCTTGVLLRKLQEDGLLSNVSHVIVDEVHERSVQSDFLLIILKEI-LQKRSDLHLILMSA 331
Query: 234 TLQADLFSKFFSNAPILFVEGRKFKVDRYYL--------------PRPCEDIVDSVVRCS 279
T+ ++ FS +F++ PIL + GR + V+ ++L C+ ++ +
Sbjct: 332 TVDSEKFSTYFTHCPILRISGRSYPVEVFHLEDIIEETGFVLEKDSEYCQKFLEEEEEVT 391
Query: 280 V------------------------------QLNSSETTGDILCFLPGQEEIDKAVAILN 309
+ Q SS T IL P + +D ++
Sbjct: 392 INVTSKAGGIKKYQEYIPVQTGAHADLNPFYQKYSSRTQHAILYMNPHKINLD----LIL 447
Query: 310 KIIPYLDES-------------VPRITAYPLYAALPPKDQAKVFEPLKGFKRKIVLATNI 356
+++ YLD+S +P + L D+ E K +L+T
Sbjct: 448 ELLAYLDKSPQFRNIEGAVLIFLPGLAHIQQLYDLLSNDRRFYSERYKVIALHSILSTQD 507
Query: 357 AETSVTI--PGVKYVI-------------------DCGLRKVKVWRHQLGLATLLTVPVS 395
+ T+ PGV+ ++ D G K + +++L+ VS
Sbjct: 508 QAAAFTLPPPGVRKIVLATNIAETGITIPDVVFVIDTGRTKENKYHESSQMSSLVETFVS 567
Query: 396 KASVAQRAGRAGRESSGKCFRLFTEADYKQLPKQSESEITRC---EITSPILMLKQYGVQ 452
KAS QR GRAGR G CFR++T ++ S EI R E+ I+ +
Sbjct: 568 KASALQRQGRAGRVRDGFCFRMYTRERFEGFMDYSVPEILRVPLEELCLHIMKCNLGSPE 627
Query: 453 DIVNWSWLEHPGKEAIISGLKELYELGA--LNEQGRVTDRGRKMALLPLAPHLSNVLIHA 510
D ++ + L+ P + I + + L ++GA LNE ++T G+ +A LP+ + +LI
Sbjct: 628 DFLSKA-LDPPQLQVISNAMNLLRKIGACELNEP-KLTPLGQHLAALPVNVKIGKMLIFG 685
Query: 511 QETQVLPYVIDIVSCLSVENLVLNPLPEERDEVNERRRALCTLGSKHGDLIMLKELFDMY 570
L V + + ++ ++ P+ +DE + + AL S H L +
Sbjct: 686 AIFGCLDPVATLAAVMTEKSPFTTPI-GRKDEADLAKSALAMADSDH--LTIYNAYLGWK 742
Query: 571 QSLQSNSEKQE--WCKQLCVSQRGFKNVIKVREQLTGYMK 608
++ Q + E +C++ +++ + V+++L +K
Sbjct: 743 KARQEGGYRSEITYCRRNFLNRTSLLTLEDVKQELIKLVK 782
>YMR128w [AJ] KOG0926 DEAH-box RNA helicase
Length = 1267
Score = 187 bits (476), Expect = 4e-47
Identities = 115/273 (42%), Positives = 161/273 (58%), Gaps = 21/273 (7%)
Query: 65 TRALRLLKGRESLPVFQNKEKIVSHIKANPVTILIGETGSGKSTQIPQFLMD-----EIS 119
+R+ + K R LPVF + KI+ I N V I+ GETGSGK+TQ+PQFL + E S
Sbjct: 379 SRSDEIQKARIQLPVFGEEHKIMEAIHHNDVVIICGETGSGKTTQVPQFLYEAGFGAEDS 438
Query: 120 PMHKGAIAVTQPRRVAAINLATRVAQEHGCRIGHEVGYSVRFDNKSHKTRTKLKYLTDGM 179
P + G + +TQPRRVAA+++A RVA E G GH+VGY +RFD+ + K TK+K++TDG+
Sbjct: 439 PDYPGMVGITQPRRVAAVSMAERVANELGDH-GHKVGYQIRFDSTA-KEDTKVKFMTDGV 496
Query: 180 LIRELMLDKNLSNYKCIIIDEAHERTILTDLILGFLKEL----------QLTKRKDLKVI 229
L+RE+M D L+ Y IIIDEAHER I TD+++G L + K LK+I
Sbjct: 497 LLREMMHDFKLTKYSSIIIDEAHERNINTDILIGMLSRCVRLRAKLHKENPIEHKKLKLI 556
Query: 230 VMSATLQADLFSK----FFSNAPILFVEGRKFKVDRYYLPRPCEDIVDSVVRCSVQLNSS 285
+MSATL+ FS+ F P+L V+ R+F V ++ R + D R + +++
Sbjct: 557 IMSATLRVSDFSENKTLFPIAPPVLQVDARQFPVSIHFNRRTAFNYTDEAFRKTCKIHQK 616
Query: 286 ETTGDILCFLPGQEEIDKAVAILNKIIPYLDES 318
G IL FL GQ+EI V L K P+ S
Sbjct: 617 LPPGAILVFLTGQQEITHMVKRLRKEFPFKKNS 649
Score = 157 bits (396), Expect = 7e-38
Identities = 87/251 (34%), Positives = 147/251 (57%), Gaps = 1/251 (0%)
Query: 297 GQEEIDKAVAILNKIIPYLDESVPRITAYPLYAALPPKDQAKVFEPLKGFKRKIVLATNI 356
G++E D+ +++ + + PLY+ LP K+Q +VF+ R ++ATN+
Sbjct: 704 GEDEEDEEEEGFEEVLTEGQTANDPLYVLPLYSLLPTKEQMRVFQKPPQGSRLCIVATNV 763
Query: 357 AETSVTIPGVKYVIDCGLRKVKVWRHQLGLATLLTVPVSKASVAQRAGRAGRESSGKCFR 416
AETS+TIPGV+YV+D G K + + G+ + VSKAS QR+GRAGR G C+R
Sbjct: 764 AETSLTIPGVRYVVDSGRSKERKYNESNGVQSFEVGWVSKASANQRSGRAGRTGPGHCYR 823
Query: 417 LFTEADYKQLPKQ-SESEITRCEITSPILMLKQYGVQDIVNWSWLEHPGKEAIISGLKEL 475
L++ A ++ +Q S+ EI R + S +L +K + +I+N+ + P + A+ ++ L
Sbjct: 824 LYSSAVFEHDFEQFSKPEILRMPVESIVLQMKSMAIHNIINFPFPTPPDRVALSKAIQLL 883
Query: 476 YELGALNEQGRVTDRGRKMALLPLAPHLSNVLIHAQETQVLPYVIDIVSCLSVENLVLNP 535
LGAL+ + +T+ G+KM+L PL+P S +L+ + E LPY++ IVS LSV + +N
Sbjct: 884 QYLGALDNKEMITEDGKKMSLFPLSPRFSKMLLVSDEKACLPYIVAIVSALSVGDPFINE 943
Query: 536 LPEERDEVNER 546
+E++ +
Sbjct: 944 FELGINEISRK 954
>7290296 [AJ] KOG0926 DEAH-box RNA helicase
Length = 1192
Score = 167 bits (424), Expect = 4e-41
Identities = 98/256 (38%), Positives = 153/256 (59%), Gaps = 10/256 (3%)
Query: 66 RALRLLKGRESLPVFQNKEKIVSHIKANPVTILIGETGSGKSTQIPQFLMDEISPMHKGA 125
R + R LP+ +++++ I NP+ I+ GETGSGK+TQ+PQFL + HK
Sbjct: 249 RTTEVQNARLRLPILAEEQQVMETINENPIVIVAGETGSGKTTQLPQFLYEAGYAQHK-M 307
Query: 126 IAVTQPRRVAAINLATRVAQEHGCRIGHEVGYSVRFDNKSHKTRTKLKYLTDGMLIRELM 185
I VT+PRRVAAI ++ RVA E EV Y +RF+ T++K++TDG+L++E+
Sbjct: 308 IGVTEPRRVAAIAMSKRVAHEMNLPES-EVSYLIRFEGNVTPA-TRIKFMTDGVLLKEIE 365
Query: 186 LDKNLSNYKCIIIDEAHERTILTDLILGFLKELQLTKRK---DLKVIVMSATLQADLFSK 242
D LS Y II+DEAHER++ TD+++G L + + K LK+I+MSATL+ F++
Sbjct: 366 TDFLLSKYSVIILDEAHERSVYTDILVGLLSRIVPLRHKRGQPLKLIIMSATLRVSDFTE 425
Query: 243 ----FFSNAPILFVEGRKFKVDRYYLPRPCEDIVDSVVRCSVQLNSSETTGDILCFLPGQ 298
F P+L VE R+F V ++ R +D V R ++++++ G IL F+ GQ
Sbjct: 426 NTRLFKIPPPLLKVEARQFPVTIHFQKRTPDDYVAEAYRKTLKIHNKLPEGGILIFVTGQ 485
Query: 299 EEIDKAVAILNKIIPY 314
+E+++ V L + PY
Sbjct: 486 QEVNQLVRKLRRTFPY 501
Score = 140 bits (352), Expect = 9e-33
Identities = 111/417 (26%), Positives = 201/417 (47%), Gaps = 26/417 (6%)
Query: 326 PLYAALPPKDQAKVFEPLKGFKRKIVLATNIAETSVTIPGVKYVIDCGLRKVKVWRHQLG 385
PLY+ L + Q ++F P+ R V++TN+AETS+TIP +KYV+DCG +K +++ G
Sbjct: 621 PLYSLLSSEKQNRIFLPVPDGCRLCVVSTNVAETSLTIPHIKYVVDCGRQKTRLYDKLTG 680
Query: 386 LATLLTVPVSKASVAQRAGRAGRESSGKCFRLFTEADYKQLPKQ-SESEITRCEITSPIL 444
++ + SKAS QRAGRAGR S+G C+RL++ A Y + S+ +I + + +L
Sbjct: 681 VSAFVVTYTSKASADQRAGRAGRISAGHCYRLYSSAVYNDCFEDFSQPDIQKKPVEDLML 740
Query: 445 MLKQYGVQDIVNWSWLEHPGKEAIISGLKELYELGAL--------NEQGRVTDRGRKMAL 496
++ G+ +V++ + P + + + + L LGAL + VT G ++
Sbjct: 741 QMRCMGIDRVVHFPFPSPPDQVQLQAAERRLIVLGALEVAKTENTDLPPAVTRLGHVISR 800
Query: 497 LPLAPHLSNVLIHAQETQVLPYVIDIVSCLSVENLVLNPLPEERDEV-------NERRRA 549
P+AP +L + + +LPY + +V+ LSV+ +++ + ++V + +R++
Sbjct: 801 FPVAPRFGKMLALSHQQNLLPYTVCLVAALSVQEVLIETGVQRDEDVAPGANRFHRKRQS 860
Query: 550 LCTLGSKH--GDLIMLKELFDMYQSLQSNSEKQEWCKQLCVSQRGFKNVIKVREQLTGYM 607
G+ GD ++L + S E+C + Q+ V K+R QLT +
Sbjct: 861 WAASGNYQLLGDPMVLLRAVGAAEYAGSQGRLPEFCAANGLRQKAMSEVRKLRVQLTNEI 920
Query: 608 KRLYNEPVEIKTKQDTLQPEEDIATNLLQPPDIAGV-----LKCFLYGFVKNTAIGMPDK 662
L VE+ + L+P D L+ +AG+ K L
Sbjct: 921 -NLNVSDVELGVDPE-LKPPTDAQARFLRQILLAGMGDRVARKVPLADIADKEERRRLKY 978
Query: 663 SFRTTPTGEPISIHPSSMLFMNSGDEIGPCPAILYIEHVFTTKGYARSVSRIELAWL 719
++ EP +H SS+L + + + A +++ +TK + R ++ IE WL
Sbjct: 979 AYNCADMEEPAFLHVSSVLRQKAPEWVIYQEA-YELQNGDSTKMFIRGITAIEPEWL 1034
>At2g47680 [A] KOG0920 ATP-dependent RNA helicase A
Length = 1015
Score = 166 bits (419), Expect = 2e-40
Identities = 143/488 (29%), Positives = 228/488 (46%), Gaps = 60/488 (12%)
Query: 76 SLPVFQNKEKIVSHIKANPVTILIGETGSGKSTQIPQFLMDEISPMHKGAIAVTQPRRVA 135
SLP+ K +I+ I N VT+++GE G GKS+Q+PQFL++ + I TQPRR A
Sbjct: 25 SLPIMAMKRRIIDKILENRVTLIVGEPGCGKSSQVPQFLLE----ANMAPILCTQPRRFA 80
Query: 136 AINLATRVAQEHGCRIGHEVGYSVRFDNKSHKTRTKLKYLTDGMLIRELMLDKNLS--NY 193
+ +A VA+ +G E+GY + +K +K+ + T G+L+ E MLDK L+ Y
Sbjct: 81 VVAVAKMVAKSRNSDLGGEIGYHIG-HSKILTEGSKILFKTAGVLLDE-MLDKGLNALKY 138
Query: 194 KCIIIDEAHERTILTDLILGFLKELQLTKRKDLKVIVMSATLQADLFSKFFSNAPILFVE 253
K II+DE HER++ +DL+L +K+ L K DL+V++MSAT + +F
Sbjct: 139 KVIILDEVHERSVESDLVLVCVKQF-LMKNNDLRVVLMSATADITRYRDYFKEL------ 191
Query: 254 GRKFKVDRYYLPRPCEDIV--DSVVRCSVQLNSSETTGDILCFLPG------QEEIDKAV 305
GR +V+ +P P + + V+ + D+ + PG EI +
Sbjct: 192 GRGERVEVVAIPSPDQRTIFQRRVLYLEQVAGLLGVSSDLSAYCPGPSPSSADTEIKPEL 251
Query: 306 A-ILNKIIPYLDESVPRI---------TAYPL---YAALPP---------------KDQA 337
+++ +I Y+ E P I T Y L Y L P +QA
Sbjct: 252 QNLIHDLILYIHEKEPDIEKSILVFLPTYYSLEQQYHQLEPFFASFEVHILHRSIDTEQA 311
Query: 338 KVFEPLKGFKRKIVLATNIAETSVTIPGVKYVIDCGLRKVKVWRHQLGLATLLTVPVSKA 397
+ +RK++LATNIAE+SVTIP V YVID W + V VS++
Sbjct: 312 LAAMKICRSRRKVILATNIAESSVTIPKVAYVIDSCRSLQVFWDPSRKRDAVQLVWVSRS 371
Query: 398 SVAQRAGRAGRESSGKCFRLFTEADYKQLPKQSESEITRCEITSPILML-----KQYGVQ 452
QR GR GR G+ +RL A + +L + I + + +L + +
Sbjct: 372 QAEQRRGRTGRTCDGEVYRLVPSAFFNKLEEHEPPSILKLSLRQQVLHICCTESRAINDA 431
Query: 453 DIVNWSWLEHPGKEAIISGLKELYELGALNEQGR----VTDRGRKMALLPLAPHLSNVLI 508
+ + ++ P + + L+ L + AL + R T GR +A PL+ S +++
Sbjct: 432 NALLAKAMDPPDPDVVDDALRMLLSIQALRKSPRGRYEPTFYGRLLASFPLSFDASILVV 491
Query: 509 HAQETQVL 516
E +L
Sbjct: 492 KFGEMGML 499
>7292573 [A] KOG0920 ATP-dependent RNA helicase A
Length = 1280
Score = 162 bits (411), Expect = 1e-39
Identities = 96/229 (41%), Positives = 140/229 (60%), Gaps = 16/229 (6%)
Query: 55 LDHVSNKELKTRALRLLKGRESLPVFQNKEKIVSHIKANPVTILIGETGSGKSTQIPQFL 114
L + + R +++ GR+ LP F E+I++ I+++PV ++ GETG GKSTQ+PQF+
Sbjct: 423 LQQFVERRKEERYQKIIDGRKQLPAFAEIERILALIESSPVVVISGETGCGKSTQVPQFI 482
Query: 115 MDE----------ISPMHKGAIAVTQPRRVAAINLATRVAQEHGCRIGHEVGYSVRFDNK 164
+D + I TQPRR++AI +A RVA E RIG VGY +R +NK
Sbjct: 483 LDNWFFRALQLPAKENLPHVEIICTQPRRLSAIGVAERVAAERLDRIGQLVGYQIRLENK 542
Query: 165 SHKTRTKLKYLTDGMLIRELMLDKNLSNYKCIIIDEAHERTILTDLILGFLKELQLTKRK 224
++ T+L + T G+L+R L D L + +I+DE HER+ +D +L LK L L +RK
Sbjct: 543 VSQS-TRLSFCTTGILLRRLASDPLLGSVTHVIVDEVHERSEESDFLLLILKNL-LRERK 600
Query: 225 DLKVIVMSATLQADLFSKFFSNAPILFVEGRKFKVDRYYLPRPCEDIVD 273
DLKVI+MSATL A LFS +F AP+L + GR F V + +L EDI++
Sbjct: 601 DLKVILMSATLNAALFSDYFGGAPVLDIPGRTFPVQQLFL----EDILE 645
Score = 135 bits (340), Expect = 2e-31
Identities = 130/482 (26%), Positives = 224/482 (45%), Gaps = 46/482 (9%)
Query: 270 DIVDSVVRCSVQLNSS-ETTGDILCFLPGQEEIDKAVAILNKIIPYLDESV--PRITAY- 325
++++SV++ V+ + G IL FLPG EI L LD ++ PR +
Sbjct: 725 ELIESVLKYIVEGSHDWPREGTILIFLPGFGEIQSVHDSL------LDNALFSPRAGKFI 778
Query: 326 --PLYAALPPKDQAKVFEPLKGFKRKIVLATNIAETSVTIPGVKYVIDCGLRKVKVWRHQ 383
PL++AL +DQA VF+ KRKIVL+TNIAETSVTI +V+DCGL K K +
Sbjct: 779 LVPLHSALSGEDQALVFKKAPPGKRKIVLSTNIAETSVTIDDCVFVVDCGLMKEKCFDSN 838
Query: 384 LGLATLLTVPVSKASVAQRAGRAGRESSGKCFRLFTEADYK-QLPKQSESEITRCEITSP 442
+ +L V VS+A+ QR GRAGR G C L+T Y+ + Q EI R +
Sbjct: 839 RNMESLDLVWVSRANAKQRKGRAGRVMPGVCIHLYTSYRYQYHILAQPVPEIQRVPLEQI 898
Query: 443 ILMLKQYGVQDIVN-----WSWLEHPGKEAIISGLKELYELGALNEQGRVTDRGRKMALL 497
+L +K N LE P +++++ L L ++GAL+ + ++T G +A L
Sbjct: 899 VLRIKTLQTFASRNTLSVLLETLEAPTEDSVLGALTRLRDVGALDAEDQLTPLGHHLAAL 958
Query: 498 PLAPHLSNVLIHAQETQVLPYVIDIVSCLSVENLVLNPLPEERDEVNERRRALCTLGSKH 557
P+ + ++++ Q L V+ I +CLS ++ ++PL +R E ++ +R S H
Sbjct: 959 PVDVRIGKLMLYGAIFQCLDSVLTIAACLSNKSPFVSPL-NKRTEADKCKRMFALGNSDH 1017
Query: 558 GDLIMLKELFDMYQSLQSNSEKQEWCKQLCVSQRGFKNVIKVREQLTGYMKRLYNEPVEI 617
++ + + + + + + +S + + ++ Q + + P+++
Sbjct: 1018 LTVLNAYRKWLDVARRGNYAASRNYASEHFLSLNTLETIADLKYQYLELLVSIGFVPIDV 1077
Query: 618 KTKQD-------TLQPEED--------IATNLLQPPDIAGVLKCFLYG--FVKNTAIGMP 660
++ TL E + T+LL ++K +++ +P
Sbjct: 1078 PRRRKNACDNILTLTGVEQNHNGDNNRLLTSLLCAALYPNIVKIMTPDRVYIQTAGGAVP 1137
Query: 661 ------DKSFRTTPTGEPISIHPSSMLFMNSGDEIGPCPAILYIEHVFTTKGYARSVSRI 714
D F+T G + IHPSS +NS + P +++ E V T+ Y R S +
Sbjct: 1138 REPSHHDLRFKTRGDGY-VKIHPSS---VNSQVSVFQAPFLVFQEKVRTSAIYIRDCSML 1193
Query: 715 EL 716
L
Sbjct: 1194 PL 1195
>At2g01130 [A] KOG0920 ATP-dependent RNA helicase A
Length = 1112
Score = 160 bits (404), Expect = 8e-39
Identities = 85/208 (40%), Positives = 137/208 (65%), Gaps = 9/208 (4%)
Query: 69 RLLKGRESLPVFQNKEKIVSHIKANPVTILIGETGSGKSTQIPQFLMDEISPMHKGA--- 125
R+L R SLP F+ + +++ I N V ++ GETG GK+TQIPQF+++ ++GA
Sbjct: 211 RMLDSRTSLPAFKQRHSVLTAISQNQVIVISGETGCGKTTQIPQFILESEIEANRGAFSS 270
Query: 126 IAVTQPRRVAAINLATRVAQEHGCRIGHEVGYSVRFDNKSHKTRTKLKYLTDGMLIRELM 185
I TQPRR++A++++ RVA E G ++G VGY VR + + T+L + T G+L+R L+
Sbjct: 271 IICTQPRRISAMSVSERVAYERGEQLGESVGYKVRLEGVKGRD-TRLLFCTTGILLRRLL 329
Query: 186 LDKNLSNYKCIIIDEAHERTILTDLILGFLKELQLTKRKDLKVIVMSATLQADLFSKFFS 245
+D+NL +I+DE HER + D +L LK+L L++R +LK+I+MSATL A+LFS +F
Sbjct: 330 VDRNLRGVTHVIVDEIHERGMNEDFLLIILKDL-LSRRSELKLILMSATLDAELFSSYFG 388
Query: 246 NAPILFVEGRKFKVDRYYLPRPCEDIVD 273
A ++++ G + V ++L EDI++
Sbjct: 389 GAGVIYIPGFTYPVRSHFL----EDILE 412
Score = 117 bits (292), Expect = 8e-26
Identities = 91/326 (27%), Positives = 150/326 (45%), Gaps = 8/326 (2%)
Query: 285 SETTGDILCFLPGQEEIDKAVAILNKIIPYLDESVPRITAYPLYAALPPKDQAKVFEPLK 344
+E G IL FL G ++I L I + + + + ++ +Q +FE
Sbjct: 494 NEGPGGILIFLTGWDDISSLKEKLQ--IHPIFGNPDLVMLLACHGSMETFEQRLIFEEPA 551
Query: 345 GFKRKIVLATNIAETSVTIPGVKYVIDCGLRKVKVWRHQLGLATLLTVPVSKASVAQRAG 404
RKIVLATNIAETS+TI V +VIDCG K + LL +SK S QR G
Sbjct: 552 SGVRKIVLATNIAETSITINDVAFVIDCGKAKETSYDALNNTPCLLPSWISKVSAQQRRG 611
Query: 405 RAGRESSGKCFRLFTEADYKQLPKQSESEITRCEITSPILMLKQYGVQDIVNW--SWLEH 462
RAGR G+C+ L+ + Y + EI R + S L +K + I + L+
Sbjct: 612 RAGRVRPGQCYHLYPKCVYDAFAEYQLPEILRTPLHSLCLQIKSLNLGSISEFLSRALQS 671
Query: 463 PGKEAIISGLKELYELGALNEQGRVTDRGRKMALLPLAPHLSNVLIHAQETQVLPYVIDI 522
P A+ + L +GAL+E +T GR ++ LP+ P L +LI L ++ +
Sbjct: 672 PELLAVQKAIAFLKIIGALDENEDLTTLGRYLSKLPMEPKLGKMLILGAILGCLDPILTV 731
Query: 523 VSCLSVENLVLNPLPEERDEVNERRRALCTLGSKHGDLIMLKELFDMYQSLQSNSEKQEW 582
+ LSV + L P +D+ + A H D + L ++ ++ + S ++
Sbjct: 732 AAGLSVRDPFLTP----QDKKDLAEAAKSQFSRDHSDHLALVRAYEGWKKAEEESAVYDY 787
Query: 583 CKQLCVSQRGFKNVIKVREQLTGYMK 608
C + +S + + + +R++ +K
Sbjct: 788 CWKNFLSIQSLRAIDSLRKEFFSLLK 813
>At2g35920 [A] KOG0920 ATP-dependent RNA helicase A
Length = 993
Score = 159 bits (403), Expect = 1e-38
Identities = 90/224 (40%), Positives = 143/224 (63%), Gaps = 12/224 (5%)
Query: 54 ALDHVSNKELKTRALRLLKG-RESLPVFQNKEKIVSHIKANPVTILIGETGSGKSTQIPQ 112
AL K T +++ LK RE LP F+ KE+ ++ + N V ++ GETG GK+TQ+PQ
Sbjct: 204 ALKERQEKLKATESVKALKAFREKLPAFKMKEEFLNSVSQNQVLVVSGETGCGKTTQLPQ 263
Query: 113 FLMDEISPMHKGA---IAVTQPRRVAAINLATRVAQEHGCRIGHEVGYSVRFDNKSHKTR 169
F+++E +GA I TQPRR++AI++A+R++ E G IG VGY +R ++K +
Sbjct: 264 FILEEEISSLRGADCNIICTQPRRISAISVASRISAERGESIGESVGYQIRLESK-RSDQ 322
Query: 170 TKLKYLTDGMLIRELMLDKNLSNYKCIIIDEAHERTILTDLILGFLKELQLTKRKDLKVI 229
T+L + T G+L+R LD NL+N +++DE HER + D +L L++L L +R DL++I
Sbjct: 323 TRLLFCTTGVLLRR--LDPNLTNVSHLLVDEIHERGMNEDFLLIILRDL-LPRRPDLRLI 379
Query: 230 VMSATLQADLFSKFFSNAPILFVEGRKFKVDRYYLPRPCEDIVD 273
+MSAT+ AD+FS +F N+P + + G F V +L ED+++
Sbjct: 380 LMSATINADMFSTYFGNSPTMHIPGFTFPVAELFL----EDVLE 419
Score = 150 bits (378), Expect = 9e-36
Identities = 127/447 (28%), Positives = 216/447 (47%), Gaps = 23/447 (5%)
Query: 270 DIVDSVVRCSVQLNSSETTGDILCFLPGQEEIDKAVAILNKIIPYLDESVPRITAYPLYA 329
D+V++ + +L E G IL FL G +EI K + +N + +L +S + PL+
Sbjct: 486 DLVEATIEHICRL---EGGGAILVFLTGWDEISKLLEKIN-MNNFLGDS-SKFLVLPLHG 540
Query: 330 ALPPKDQAKVFEPLKGFKRKIVLATNIAETSVTIPGVKYVIDCGLRKVKVWRHQLGLATL 389
++P +Q ++F+ KRKIVLATNIAE+S+TI V YV+DCG K + +A L
Sbjct: 541 SMPTVNQREIFDRPPPNKRKIVLATNIAESSITIDDVVYVVDCGKAKETSYDALNKVACL 600
Query: 390 LTVPVSKASVAQRAGRAGRESSGKCFRLFTEADYKQLPKQSESEITRCEITSPILMLKQY 449
L +SKAS QR GRAGR +G C+RL+ + Y P+ EI R + L +K
Sbjct: 601 LPSWISKASAHQRRGRAGRVQAGVCYRLYPKVIYDAFPQYQLPEIIRTPLQELCLHIKSL 660
Query: 450 GVQDIVNW--SWLEHPGKEAIISGLKELYELGALNEQGRVTDRGRKMALLPLAPHLSNVL 507
V I ++ L+ P A+ + ++ L +GALN+ +T GR + LP+ P++ +L
Sbjct: 661 QVGSIGSFLAKALQPPDALAVENAIELLKTIGALNDVEELTPLGRHLCTLPVDPNIGKML 720
Query: 508 IHAQETQVLPYVIDIVSCLSVENLVLNPLPEERDEVNERRRALCTLGSKHGDLIMLKELF 567
+ Q + + I + L+ + + PL ++E +E +R G D I L + +
Sbjct: 721 LIGAIFQCVNPALTIAAALAYRSPFVLPL-NRKEEADEAKRYFA--GDSCSDHIALLKAY 777
Query: 568 DMYQSLQSNSEKQEWCKQLCVSQRGFKNVIKVREQLTGYMKRLYNEPVEIKTKQDTLQPE 627
+ Y+ + ++++C Q +S + + +R Q + + + +
Sbjct: 778 EGYRDAKRGGNEKDFCWQNFLSPVTLRMMEDMRNQFLDLLSDIGFVDKSKPNAYNQYSYD 837
Query: 628 EDIATNLLQPPDIAGVLKCFLYGFVKNTAIGMPDKSFRTTPTGEPISIHPSSMLFMNSGD 687
++ + +L V++C G K TA F T G+ + IHP S +N+
Sbjct: 838 MEMISAVLCAGLYPNVVQCKRRG--KRTA-------FYTKELGK-VDIHPGS---VNARV 884
Query: 688 EIGPCPAILYIEHVFTTKGYARSVSRI 714
+ P ++Y E V TT Y R + I
Sbjct: 885 NLFSLPYLVYSEKVKTTSVYIRDSTNI 911
>Hs7661934 [A] KOG0922 DEAH-box RNA helicase
Length = 576
Score = 157 bits (398), Expect = 4e-38
Identities = 89/228 (39%), Positives = 139/228 (60%), Gaps = 12/228 (5%)
Query: 61 KELKTRALRLLKGRESLPVFQNKEKIVSHIKANPVTILIGETGSGKSTQIPQFLMDEISP 120
K+ R +L + R +LP+ Q +I+ +K + V ++ G+TG GKSTQ+PQ+L+
Sbjct: 146 KQAFGRLAKLQRERAALPIAQYGNRILQTLKEHQVVVVAGDTGCGKSTQVPQYLL----A 201
Query: 121 MHKGAIAVTQPRRVAAINLATRVAQEHGCRIGHEVGYSVRFDNKSHKTRTKLKYLTDGML 180
+A TQPRR+A I+LA RV E + G +VGY +RF++ + TK+ +LT G+L
Sbjct: 202 AGFSHVACTQPRRIACISLAKRVGFESLSQYGSQVGYQIRFES-TRSAATKIVFLTVGLL 260
Query: 181 IRELMLDKNLSNYKCIIIDEAHERTILTDLILGFLKELQLTKRKDLKVIVMSATLQADLF 240
+R++ + +L Y+ +I+DE HER + D +LG L+ L L R DLKVI+MSAT+ LF
Sbjct: 261 LRQIQREPSLPQYEVLIVDEVHERHLHNDFLLGVLQRL-LPTRPDLKVILMSATINISLF 319
Query: 241 SKFFSNAPILFVEGRKFKVDRYYLPRPCEDIVDSVVRCSVQLNSSETT 288
S +FSNAP++ V GR F + + + P V +C + N +ET+
Sbjct: 320 SSYFSNAPVVQVPGRLFPITVFDVAPP------GVRKCILSTNIAETS 361
Score = 107 bits (268), Expect = 5e-23
Identities = 67/192 (34%), Positives = 102/192 (52%)
Query: 339 VFEPLKGFKRKIVLATNIAETSVTIPGVKYVIDCGLRKVKVWRHQLGLATLLTVPVSKAS 398
VF+ RK +L+TNIAETSVTI G+++V+D G K + Q L L +S+AS
Sbjct: 340 VFDVAPPGVRKCILSTNIAETSVTIDGIRFVVDSGKVKEMSYDPQAKLQRLQEFWISQAS 399
Query: 399 VAQRAGRAGRESSGKCFRLFTEADYKQLPKQSESEITRCEITSPILMLKQYGVQDIVNWS 458
QR GRAGR G CFRL+ E+DY EI R + S +L +K V D +
Sbjct: 400 AEQRKGRAGRTGPGVCFRLYAESDYDAFAPYPVPEIRRVALDSLVLQMKSMSVGDPRTFP 459
Query: 459 WLEHPGKEAIISGLKELYELGALNEQGRVTDRGRKMALLPLAPHLSNVLIHAQETQVLPY 518
++E P ++ + + L + GAL+ +T G +A LP+ + +LI ++
Sbjct: 460 FIEPPPPASLETAILYLRDQGALDSSEALTPIGSLLAQLPVDVVIGKMLILGSMFSLVEP 519
Query: 519 VIDIVSCLSVEN 530
V+ I + LSV++
Sbjct: 520 VLTIAAALSVQS 531
>Hs21717812 [A] KOG0920 ATP-dependent RNA helicase A
Length = 860
Score = 156 bits (395), Expect = 9e-38
Identities = 86/207 (41%), Positives = 138/207 (66%), Gaps = 5/207 (2%)
Query: 61 KELKTRALRLLKGRESLPVFQNKEKIVSHIKANPVTILIGETGSGKSTQIPQFLMDEI-- 118
K+ + +L+ R+SLP ++ +E I++ ++ + V ++ G TG GK+TQIPQF++D+
Sbjct: 2 KQASRQFQSILQERQSLPAWEERETILNLLRKHQVVVISGMTGCGKTTQIPQFILDDSLS 61
Query: 119 SPMHKGA-IAVTQPRRVAAINLATRVAQEHGCRIGHEVGYSVRFDNKSHKTRTKLKYLTD 177
P K A I TQPRR++AI++A RVA+E R+G VGY +R ++ + T+L Y T
Sbjct: 62 GPPEKVANIICTQPRRISAISVAERVAKERAERVGLTVGYQIRLESVK-SSATRLLYCTT 120
Query: 178 GMLIRELMLDKNLSNYKCIIIDEAHERTILTDLILGFLKELQLTKRKDLKVIVMSATLQA 237
G+L+R L D L II+DE HERT +D +L LK++ +++R L+VI+MSATL A
Sbjct: 121 GVLLRRLEGDTALQGVSHIIVDEVHERTEESDFLLLVLKDI-VSQRPGLQVILMSATLNA 179
Query: 238 DLFSKFFSNAPILFVEGRKFKVDRYYL 264
+LFS +F++ P++ + GR F VD+++L
Sbjct: 180 ELFSDYFNSCPVITIPGRTFPVDQFFL 206
Score = 134 bits (336), Expect = 6e-31
Identities = 122/484 (25%), Positives = 222/484 (45%), Gaps = 47/484 (9%)
Query: 270 DIVDSVVRCSVQLNSSETTGDILCFLPGQEEIDKAVAILNKIIPYLDESVPRITAYPLYA 329
+++++++ V S G IL FLPG EI L + + R +PL++
Sbjct: 303 ELIEALLEWIVDGKHSYPPGAILVFLPGLAEIKMLYEQLQSNSLFNNRRSNRCVIHPLHS 362
Query: 330 ALPPKDQAKVFEPLKGFKRKIVLATNIAETSVTIPGVKYVIDCGLRKVKVWRHQLGLATL 389
+L ++Q VF KI+++TNIAETS+TI V YVID G K K + G+ +L
Sbjct: 363 SLSSEEQQAVFVKPPAGVTKIIISTNIAETSITIDDVVYVIDSGKMKEKRYDASKGMESL 422
Query: 390 LTVPVSKASVAQRAGRAGRESSGKCFRLFTEADYK-QLPKQSESEITRCEITSPILMLK- 447
VS+A+ QR GRAGR +SG CF +FT Y QL KQ EI R + L +K
Sbjct: 423 EDTFVSQANALQRKGRAGRVASGVCFHVFTSHHYNHQLLKQQLPEIQRVPLEQLCLRIKI 482
Query: 448 -----QYGVQDIVNWSWLEHPGKEAIISGLKELYELGALNEQGRVTDRGRKMALLPLAPH 502
+ +Q + + +E P +++ + L +LGAL R+T G +A LP+
Sbjct: 483 LEMFSAHNLQSVFS-RLIEPPHTDSLRASKIRLRDLGALTPDERLTPLGYHLASLPVDVR 541
Query: 503 LSNVLIHAQETQVLPYVIDIVSCLSVENLVLNPLPEERDEVNERRRALCTLGSKHGDLIM 562
+ +++ + L + I + L+ ++ ++P ++++E N+++ S D +
Sbjct: 542 IGKLMLFGSIFRCLDPALTIAASLAFKSPFVSPW-DKKEEANQKKLEFAFANS---DYLA 597
Query: 563 LKELFDMYQ--SLQSNSEKQEWCKQLCVSQRGFKNVIKVREQLTGYMKRLYNEPVEIKTK 620
L + + +Q + + +C+Q +S R + + ++ Q T + + ++ +
Sbjct: 598 LLQAYKGWQLSTKEGVRASYNYCRQNFLSGRVLQEMASLKRQFTELLSDIGFAREGLRAR 657
Query: 621 QDTLQPE----------EDIATNLLQPPDIAGVLKCFLYGFVKNTAIGMPDKSFRTTPTG 670
+ + + E+ +N P I+ +L LY V + P+ F+ T TG
Sbjct: 658 EIEKRAQGGDGVLDATGEEANSNAENPKLISAMLCAALYPNV--VQVKSPEGKFQKTSTG 715
Query: 671 ----EP--------------ISIHPSSMLFMNSGDEIGPCPAILYIEHVFTTKGYARSVS 712
+P + IHPSS+ + + P +LY E + T++ + R S
Sbjct: 716 AVRMQPKSAELKFVTKNDGYVHIHPSSVNYQVRHFD---SPYLLYHEKIKTSRVFIRDCS 772
Query: 713 RIEL 716
+ +
Sbjct: 773 MVSV 776
>CE29563 [AJ] KOG0926 DEAH-box RNA helicase
Length = 1148
Score = 156 bits (395), Expect = 9e-38
Identities = 95/265 (35%), Positives = 153/265 (56%), Gaps = 10/265 (3%)
Query: 61 KELKTRALRLLKGRESLPVFQNKEKIVSHIKANPVTILIGETGSGKSTQIPQFLMDEISP 120
K + R+ + K R LP+F + +IV I N VT++ GETGSGK+TQIPQFL +
Sbjct: 220 KVIVERSKEIQKSRAELPIFAEEMRIVEAINENLVTVVCGETGSGKTTQIPQFLYEAGYA 279
Query: 121 MHKGAIAVTQPRRVAAINLATRVAQEHGCRIGHEVGYSVRFDNKSHKTRTKLKYLTDGML 180
I +T+PRRVAAI +A RV E EV Y +R++ +T T + ++TDG+L
Sbjct: 280 SEGELIGITEPRRVAAIAMAQRVGVE--LAKPDEVSYQIRYEGTRSET-TNILFMTDGVL 336
Query: 181 IRELMLDKNLSNYKCIIIDEAHERTILTDLILGFLKE---LQLTKRKDLKVIVMSATLQA 237
++E+ D L Y I+IDEAHER++ +D+++G L L+ + L++++MSATL+
Sbjct: 337 MKEMEQDVMLKKYSVILIDEAHERSMYSDVLIGMLSRIVPLRSKTARPLRLVIMSATLRL 396
Query: 238 DLFS--KFFS--NAPILFVEGRKFKVDRYYLPRPCEDIVDSVVRCSVQLNSSETTGDILC 293
D F+ K F ++ V+ R+F V ++ R +D + S R + +++ + G IL
Sbjct: 397 DDFTHKKLFPLLTPKVIKVDARQFPVSVHFEKRTPDDYIASAFRKTCRIHETLPPGAILV 456
Query: 294 FLPGQEEIDKAVAILNKIIPYLDES 318
F+ GQ E+ + + L K P + E+
Sbjct: 457 FVTGQHEVKQLITKLKKRYPVVYET 481
Score = 147 bits (370), Expect = 7e-35
Identities = 119/419 (28%), Positives = 198/419 (46%), Gaps = 31/419 (7%)
Query: 326 PLYAALPPKDQAKVFEPLKGFKRKIVLATNIAETSVTIPGVKYVIDCGLRKVKVWRHQLG 385
PLY+ L Q +VF+ R V++TN+AETS+TIPGVKYVID G K +++ G
Sbjct: 579 PLYSLLSMGKQRRVFDETPAGMRLCVISTNVAETSLTIPGVKYVIDGGFEKRRLYDSITG 638
Query: 386 LATLLTVPVSKASVAQRAGRAGRESSGKCFRLFTEADYKQLPKQSESEITRCEITSPILM 445
++ +S+AS QRAGRAGR S+G +RL++ A Y+ K ++ EI +L
Sbjct: 639 VSRFAVCRISQASGDQRAGRAGRISAGHAYRLYSSAVYQDFVKFADPEILSKPADQLVLH 698
Query: 446 LKQYGVQDIVNWSWLEHPGKEAIISGLKELYELGALNE-------QGRVTDRGRKMALLP 498
LK + +VN+ + P ++ + S K L LGAL+E + R+T G+ +A+ P
Sbjct: 699 LKSMNIVKVVNFPFPSAPDEQMLESAEKRLCRLGALSESTKNGKTEARITKLGKTLAVFP 758
Query: 499 LAPHLSNVLIHAQETQVLPYVIDIVSCLSVENLVL------NPLPEERDE-----VNERR 547
LAP + + A + ++ + I ++S LSV ++ PEE E + ERR
Sbjct: 759 LAPSYAKFIAMADQHNLMSHAILLISLLSVREPLIPVSSLRGDTPEETKELMKNVLKERR 818
Query: 548 RALCTLGSKH-GDLIMLKELFDMYQSLQSNSEKQEWCKQLCVSQRGFKNVIKVREQLTGY 606
R G++ GDL +L + + ++ N+ + C+++ + + K+R+QLT
Sbjct: 819 RWCSHTGARRLGDLKVLMHAASVAEQIKYNARE---CEKVGLRVKALVEARKLRQQLTNI 875
Query: 607 MKRLYNEPVEIKTKQDTLQPEEDIATNLLQPPDIAGVLKCFLYGFVKNTAIGMPDK-SFR 665
+ + D L P D LL+ +A ++ K ++
Sbjct: 876 VNASCKKEHAAALDSD-LPPPTDQQAQLLRQMVVASFSDRLARRVDRSVGQEEVQKGAYE 934
Query: 666 TTPTGEPISIHPSSMLFMNSGDEIGPCPAILYIEHV-FTTKGYARSVSRIELAWLQEIA 723
TT + I P S++F + ++Y E V K SV ++ WL +A
Sbjct: 935 TTLIKGHVFIDPCSVVFTEEPE------FVIYQELVQVNEKKLMTSVCAVDKEWLSRLA 987
>At4g18470_2 [A] KOG0922 DEAH-box RNA helicase
Length = 547
Score = 154 bits (390), Expect = 4e-37
Identities = 80/184 (43%), Positives = 126/184 (68%), Gaps = 8/184 (4%)
Query: 72 KGRESLPVFQNKEKIVSHIKANPVTILIGETGSGKSTQIPQFLMDEISPMHKGAIAVTQP 131
K R+ LPV++ + +I+ ++ + TI++GETGSGK+TQIPQ+L + IA TQP
Sbjct: 9 KQRQRLPVYKYRTEILYLVENHATTIIVGETGSGKTTQIPQYLKEAGWAEGGRVIACTQP 68
Query: 132 RRVAAINLATRVAQEHGCRIGHEVGYSVRFDNKSHKTRTKLKYLTDGMLIRELMLDKNLS 191
RR+A ++ RVA+E G +G EVGY++RF++ + T +K+LTDG+LIRE+M D L+
Sbjct: 69 RRLAVQAVSARVAEEMGVNLGEEVGYTIRFEDHTTSGVTSVKFLTDGVLIREMMEDPLLT 128
Query: 192 NYKCIIIDEAHERTILTDLILGFLKELQLT--------KRKDLKVIVMSATLQADLFSKF 243
Y I+IDEAHER+I TD++LG LK++ + +R +L++I+ SAT++A S F
Sbjct: 129 KYSVIMIDEAHERSISTDILLGLLKKVSQSNTVLIIQRRRPELRLIISSATIEAKTMSNF 188
Query: 244 FSNA 247
F+++
Sbjct: 189 FNSS 192
Score = 58.5 bits (140), Expect = 3e-08
Identities = 68/268 (25%), Positives = 112/268 (41%), Gaps = 49/268 (18%)
Query: 446 LKQYGVQDIVNWSWLEHPGKEAIISGLKELYELGALNEQGRVTD-RGRKMALLPLAPHLS 504
LK G+ +I+ + W P EA+I L+ LY L L++ ++T G ++A LPL P +S
Sbjct: 254 LKALGIDNILGFDWPAPPSSEAMIRALEVLYSLQILDDDAKLTSPTGFQVAELPLDPMIS 313
Query: 505 NVLIHAQETQVLPYVIDIVSCLSVENLVLNP----LPEERDEVNERRRALCTLGSKHGDL 560
+++ + E +I I + LSV+ L P L R C K +
Sbjct: 314 KMILASSELGCSHEIITIAAVLSVQVKALYPFFLCLKFLLFIYIRNNRTYC----KFVII 369
Query: 561 IMLKELFDM--------YQSLQS--------NSEKQEWCKQLCVSQRGFKNVIKVREQLT 604
EL+D+ Y S+QS E+ E + ++ K V+++R+QL
Sbjct: 370 CFRLELWDLKLNRCNLEYVSMQSVWIIARGVQKEQDEAKLRFAAAE---KKVVEIRDQLK 426
Query: 605 GYMKRLYNEPVEIKTKQDTLQPEEDIATNLLQPPDIAGVLKCFLYGFVKNTAIGMPDKS- 663
+RL + +K+ D+ V K GF N P +
Sbjct: 427 RIARRL---GITLKSCDG----------------DMEAVRKAVTAGFFANACRLEPHSNG 467
Query: 664 -FRTTPTGEPISIHPSSMLFMNSGDEIG 690
++T E + IHPSS+LF ++G
Sbjct: 468 VYKTIRGSEEVYIHPSSVLFRRCLKQLG 495
>At1g48650 [A] KOG0920 ATP-dependent RNA helicase A
Length = 1167
Score = 153 bits (386), Expect = 1e-36
Identities = 80/194 (41%), Positives = 128/194 (65%), Gaps = 5/194 (2%)
Query: 74 RESLPVFQNKEKIVSHIKANPVTILIGETGSGKSTQIPQFLMDEISPMHKGA---IAVTQ 130
R++LP ++ K+ ++ I AN V ++ GETG GK+TQ+PQ++++ +GA I TQ
Sbjct: 266 RKTLPAYKEKDALLKAIAANQVVVVSGETGCGKTTQLPQYILESEIEAARGATCSIICTQ 325
Query: 131 PRRVAAINLATRVAQEHGCRIGHEVGYSVRFDNKSHKTRTKLKYLTDGMLIRELMLDKNL 190
PRR++AI+++ RVA E G +IG VGY VR + + T+L + T G+L+R L++D++L
Sbjct: 326 PRRISAISVSERVAAERGEQIGESVGYKVRLEGMRGRD-TRLLFCTTGVLLRRLLVDRSL 384
Query: 191 SNYKCIIIDEAHERTILTDLILGFLKELQLTKRKDLKVIVMSATLQADLFSKFFSNAPIL 250
+++DE HER + D +L LK+L L +R DLK+I+MSATL A+LFS +F AP +
Sbjct: 385 KGVTHVVVDEIHERGMNEDFLLIVLKDL-LPRRPDLKLILMSATLNAELFSSYFGGAPAM 443
Query: 251 FVEGRKFKVDRYYL 264
+ G + V ++L
Sbjct: 444 HIPGFTYPVRAHFL 457
Score = 120 bits (301), Expect = 7e-27
Identities = 90/327 (27%), Positives = 167/327 (50%), Gaps = 11/327 (3%)
Query: 286 ETTGDILCFLPGQEEIDKAVAILNKIIPYLDESVP-RITAYPLYAALPPKDQAKVFE-PL 343
E G +L F+ G ++I+ ++ N++ + P ++ + ++ +Q +F+ P
Sbjct: 546 ERPGAVLVFMTGWDDIN---SLKNQLEAHSLLGDPNKVLLLACHGSMASSEQRLIFDRPP 602
Query: 344 KGFKRKIVLATNIAETSVTIPGVKYVIDCGLRKVKVWRHQLGLATLLTVPVSKASVAQRA 403
+G RKIVLATN+AETS+TI V YVIDCG K + LL +SKA+ QR
Sbjct: 603 EGI-RKIVLATNMAETSITINDVVYVIDCGKAKETSYDALNNTPCLLPSWISKAAARQRR 661
Query: 404 GRAGRESSGKCFRLFTEADYKQLPKQSESEITRCEITSPILMLKQYGVQDIVNW--SWLE 461
GRAGR G+C+ L+ Y+ + E+ R + S L +K G+ I + L+
Sbjct: 662 GRAGRVMPGECYHLYPRCVYEAFADYQQPELLRTPLQSLCLQIKSLGLGSISEFLSRALQ 721
Query: 462 HPGKEAIISGLKELYELGALNEQGRVTDRGRKMALLPLAPHLSNVLIHAQETQVLPYVID 521
P ++ + ++ L +GAL++ +T G+ +++LP+ P L +LI L V+
Sbjct: 722 PPEALSVQNAVEYLKIIGALDDDENLTPLGKNLSMLPVEPKLGKMLILGAIFNCLDPVMT 781
Query: 522 IVSCLSVENLVLNPLPEERDEVNERRRALCTLGSKHGDLIMLKELFDMYQSLQSNSEKQE 581
+V+ LSV + L +P ++ ++ E R+ + G + D + L ++ ++ + +
Sbjct: 782 VVAGLSVRDPFL--MPFDKKDLAETARSKFS-GRDYSDHLTLVRAYNGWKDAERTHSGYD 838
Query: 582 WCKQLCVSQRGFKNVIKVREQLTGYMK 608
+C + +S + K + +R+Q +K
Sbjct: 839 YCWKNFLSSQTLKAMDSMRKQFFNLLK 865
>At1g58060 [A] KOG0920 ATP-dependent RNA helicase A
Length = 1453
Score = 152 bits (383), Expect = 2e-36
Identities = 93/230 (40%), Positives = 141/230 (60%), Gaps = 21/230 (9%)
Query: 60 NKELKTRALRLLKGRESLPVFQNKEKIVSHIKANPVTILIGETGSGKSTQIPQFLMDEIS 119
NK+ + +LK R +LP+ + K I+ H+K V ++ GETGSGK+TQ+PQF++D++
Sbjct: 597 NKKRTQKYKDMLKTRTALPISEVKNGILQHLKEKDVLVVCGETGSGKTTQVPQFILDDMI 656
Query: 120 PMHKGA---IAVTQPRRVAAINLATRVAQEHGCRIG-----HEVGYSVRFDNKSHKTRTK 171
G I TQPRR+AAI++A RVA E C VGY VR ++ + +T+
Sbjct: 657 DSGHGGYCNIICTQPRRIAAISVAQRVADER-CESSPGLDDSLVGYQVRLES-ARSDKTR 714
Query: 172 LKYLTDGMLIRELMLDKNLSNYKCIIIDEAHERTILTDLILGFLKEL------QLTKRKD 225
L + T G+L+R+L D+ L++ II+DE HER++L D +L LK L T RK
Sbjct: 715 LLFCTTGILLRKLAGDRTLNDVTHIIVDEVHERSLLGDFLLIILKSLIEKQSCDNTSRK- 773
Query: 226 LKVIVMSATLQADLFSKFFSNAPILFVEGRKFKVDRYYLPRPCEDIVDSV 275
LKVI+MSAT+ ADLFS++F + P++ +GR V ++L E+I +S+
Sbjct: 774 LKVILMSATVDADLFSRYFGHCPVITAQGRTHPVTTHFL----EEIYESI 819
Score = 125 bits (313), Expect = 3e-28
Identities = 125/461 (27%), Positives = 211/461 (45%), Gaps = 46/461 (9%)
Query: 289 GDILCFLPGQEEIDKAVAILNKIIPYLDESVPRITAYPLYAALPPKDQAKVF-EPLKGFK 347
G IL FLPG EI + +L + + + PL++++ +Q KVF P KG
Sbjct: 916 GAILIFLPGVAEIYMLLDMLAASYRFRGPAADWLL--PLHSSIASSEQRKVFLRPPKGL- 972
Query: 348 RKIVLATNIAETSVTIPGVKYVIDCGLRKVKVWRHQLGLATLLTVPVSKASVAQRAGRAG 407
RK++ ATNIAETS+TI V YVID G K + Q L++++ +S+A+ QR GRAG
Sbjct: 973 RKVIAATNIAETSITIDDVVYVIDSGKHKENRYNPQKKLSSMVEDWISQANARQRTGRAG 1032
Query: 408 RESSGKCFRLFTEADYKQLPKQSE-SEITRCEITSPILMLKQYGVQDIVNW--SWLEHPG 464
R G CF L+T +++L + + E+ R + L +K G+ I + LE P
Sbjct: 1033 RVKPGICFSLYTRYRFEKLMRPYQVPEMLRMPLVELCLQIKLLGLGHIKPFLSRALEPPS 1092
Query: 465 KEAIISGLKELYELGALNEQGRVTDRGRKMALLPLAPHLSNVLIHAQETQVLPYVIDIVS 524
+ A+ S + L+E+GA+ +T G +A LP+ + +L++ L ++ I +
Sbjct: 1093 EGAMTSAISLLHEVGAVEGDEELTPLGHHLAKLPVDVLIGKMLLYGGIFGCLSPILSIAA 1152
Query: 525 CLSVENLVLNPLPEERDEVNERRRALCTLGSKHGDL---------IMLKELFDMY-QSLQ 574
LS ++ + P E+++ + L G DL +++ +D + + LQ
Sbjct: 1153 FLSYKSPFIYPKDEKQNVDRVKLALLSDNGVSSSDLNNNDRQSDHLLMMVAYDKWVKILQ 1212
Query: 575 SNSEK--QEWCKQLCVSQRGFKNVIKVREQLTGYMK--RLYNEPVEIKTKQDTL-----Q 625
K Q +C+ +S + + +R Q + L N P KT ++ L
Sbjct: 1213 ERGMKAAQRFCESKFLSSSVMRMIRDMRVQFGTLLADIGLINLP---KTGEENLDVWFSD 1269
Query: 626 PEEDIATNLLQPPDIAGVLKCFLYGFVKNTAIGMPDKSFRT-TPTG-------------E 671
P + QP + +L LY + G+ + +F + T G
Sbjct: 1270 PTQPFNMYSQQPEVVKAILCAGLYPNIAANDKGITETTFNSLTKQGNQTKSYSAWYDGRR 1329
Query: 672 PISIHPSSMLFMNSGDEIGPCPAILYIEHVFTTKGYARSVS 712
+ IHPSS +NS + P ++++E V T K Y R +
Sbjct: 1330 EVHIHPSS---INSNFKAFQNPFLVFLEKVETNKVYLRDTT 1367
>CE18218 [K] KOG0921 Dosage compensation complex subunit MLE
Length = 1402
Score = 151 bits (382), Expect = 3e-36
Identities = 89/211 (42%), Positives = 129/211 (60%), Gaps = 16/211 (7%)
Query: 74 RESLPVFQNKEKIVSHIKANPVTILIGETGSGKSTQIPQFLMDEISPMHKGA---IAVTQ 130
R LPV Q +E IV + N VT++ GETG GKSTQ+ QFL++ GA V+Q
Sbjct: 479 RGELPVAQYRENIVQTVAENRVTLIKGETGCGKSTQVAQFLLESFLENSNGASFNAVVSQ 538
Query: 131 PRRVAAINLATRVAQEHGCRIGHEVGYSVRFDNKSHKTRTKLKYLTDGMLIRELMLDKNL 190
PRR++AI+LA RVA E G +G GY+VRFD+ + + + + T G+L+R M++ L
Sbjct: 539 PRRISAISLAERVANERGEEVGETCGYNVRFDSATPRPYGSIMFCTVGVLLR--MMENGL 596
Query: 191 SNYKCIIIDEAHERTILTDLILGFLKELQLTKRKDLKVIVMSATLQADLFSKFFSN---- 246
+IIDE HER + TD +L L+E+ T R DL+V++MSAT+ DLF+ FFS+
Sbjct: 597 RGISHVIIDEIHERDVDTDFVLIVLREMISTYR-DLRVVLMSATIDTDLFTNFFSSIPDV 655
Query: 247 --APILFVEGRKFKVDRYYLPRPCEDIVDSV 275
P++ + GR F V +YL EDI+ ++
Sbjct: 656 GPTPVITMHGRTFPVQSFYL----EDILHNL 682
Score = 120 bits (302), Expect = 6e-27
Identities = 107/424 (25%), Positives = 197/424 (46%), Gaps = 26/424 (6%)
Query: 289 GDILCFLPGQEEIDKAVAILNKIIPYLD-ESVPRITAYPLYAALPPKDQAKVFEPLKGFK 347
G +L FLPG EI + + N+++ + + + PL++ L ++Q KVF G K
Sbjct: 761 GAVLVFLPGWAEI---MTLCNRLLEHQEFGQANKYEILPLHSQLTSQEQRKVFNHYPG-K 816
Query: 348 RKIVLATNIAETSVTIPGVKYVIDCGLRKVKVWRHQLGLATLLTVPVSKASVAQRAGRAG 407
RKI+++TNIAETS+TI V YVID K +++ + TV SK +V QR GRAG
Sbjct: 817 RKIIVSTNIAETSITIDDVVYVIDSCKAKERMYTSNNNMVHFATVWASKTNVIQRRGRAG 876
Query: 408 RESSGKCFRLFTEADYKQLPKQSESEITRC---EITSPILMLKQYGVQDIVNWSWLEHPG 464
R +G F L ++ ++ L +E+ R +I I +L+ V + + + L+ P
Sbjct: 877 RVRAGYAFHLCSKMRFEALDDHGTAEMLRIPLHQIALTIKLLRLGSVGEFLGKA-LQPPP 935
Query: 465 KEAIISGLKELYELGALNEQGRVTDRGRKMALLPLAPHLSNVLIHAQETQVLPYVIDIVS 524
+ ++ L +GAL+ +T G+ +A +P+ P ++ VLI + D+ S
Sbjct: 936 YDMVVESEAVLQAMGALDRNLELTSLGKMLARMPIEPVIAKVLILGTALGAGSVMCDVAS 995
Query: 525 CLSVENLVLNPLPEERDEVNERRRALCTLGSKHGDLIMLKELFDMYQ---SLQSNSEKQE 581
+S + P + ++ +R G+K D + + + Y+ + +++ ++E
Sbjct: 996 AMSFPTPFV-PREKHHSRLSGTQRKFA--GNKFSDHVAIVSVIQGYREAVQMGASAAERE 1052
Query: 582 WCKQLCVSQRGFKNVIKVREQLTGYMKRLYNEPVEIKTKQDTLQPEEDIATNLLQPPDIA 641
+C++ +S K R QL ++ + P +I DI+ N+ P
Sbjct: 1053 FCERYSLSNPVLKMTDGARRQLIDVLRNQCSFPEDILF---------DISVNVNGPDREL 1103
Query: 642 GVLKCFL-YGFVKNTAIGMPDKSFRTTPTGEPISIHPSSMLFMNSGDEIG-PCPAILYIE 699
+++ L N A + + T + S ++ MN+ E+ P P +++ E
Sbjct: 1104 NLMRSLLVMALYPNVAYYVGKRKVLTIEQSSALINKYSMLVPMNNRQEMDFPSPLLVFTE 1163
Query: 700 HVFT 703
V T
Sbjct: 1164 KVRT 1167
>CE05718 [A] KOG0920 ATP-dependent RNA helicase A
Length = 1425
Score = 148 bits (374), Expect = 3e-35
Identities = 123/444 (27%), Positives = 215/444 (47%), Gaps = 43/444 (9%)
Query: 271 IVDSVVRCSVQLNSSETTGDILCFLPGQEEIDKAVAILNKIIPYLDESVPRITAYPLYAA 330
++D V++ L S G IL FLPG E+I + + ++ L +++ + PL++
Sbjct: 630 LLDQVIQ---YLADSPVFGTILVFLPGYEDIQQMLKAIDCWKNSL-KNMKNVIVLPLHSQ 685
Query: 331 LPPKDQAKVFEPLKGFKRKIVLATNIAETSVTIPGVKYVIDCGLRKVKVWRHQLGLATLL 390
+ + +F+ + RKI+LATNIAE S+TI V +V+D G K K + H+ L+TL
Sbjct: 686 MTSINHGDIFKSVPKDTRKIILATNIAEASITIEDVIFVVDTGKVKEKSFDHEAKLSTLT 745
Query: 391 TVPVSKASVAQRAGRAGRESSGKCFRLFTEADYKQLPKQSESEITRCEITSPILMLKQYG 450
P+++++ QR+GRAGR ++G C RL+TE +Y +P+ +E+ R I L K +
Sbjct: 746 VKPIARSNADQRSGRAGRVANGYCIRLYTEQEYNSMPETQIAEMKRAAIYDVTLHAKLFA 805
Query: 451 VQDIVNWSWL----EHPGKEAIISGLKELYELGAL-----------NEQG---------- 485
+ + +L E P KE+I+ + L ++GA NE+G
Sbjct: 806 PKTLKISEFLSLAPEPPEKESILQAITFLEQIGAFYTPIKIYDNSGNEEGLKNDEEAENS 865
Query: 486 ------RVTDRGRKMALLPLAPHLSNVLIHAQETQVLPYVIDIVSCLSVENLVLNPLPEE 539
+TD GR MA LPL P LS +L+ + L ++++V+ L+ + L E+
Sbjct: 866 ENPEDPELTDLGRLMARLPLDPQLSRMLLFGLALKCLTPIVNLVALLASREPYVLALSED 925
Query: 540 RDEVNERRRALCTLGSKHGDLIMLKELFDMYQSLQSNSEKQEWCKQLCVSQRGFKNVIKV 599
RD ++ + + D ++ L + + S ++NS++ ++C+ ++ + V
Sbjct: 926 RDLQSKMKFEMAQ--QDLSDHLLYIRLCNEFCS-KNNSQQNQFCRDHFLNFSTMRMVQGT 982
Query: 600 REQLTGYMKRLYNEPVEIKTKQDTLQPEEDIATNLLQP--PDIAGVLKCFLYGFVKNTAI 657
R QL + R + + I +D L D N P I V+ Y F+ +A
Sbjct: 983 RRQLLRELVRA--KLINISPNRDVLTVLTDHHFNQFSQCWPMIQAVIAAGCYPFIGVSAS 1040
Query: 658 GMPDKSFRTTPTGEPISIHPSSML 681
K +T +P +HPSSM+
Sbjct: 1041 ESNLKKVQTF-NDKPAFLHPSSMV 1063
Score = 142 bits (357), Expect = 2e-33
Identities = 89/200 (44%), Positives = 123/200 (61%), Gaps = 7/200 (3%)
Query: 70 LLKGRESLPVFQNKEKIVSHIKANPVTILIGETGSGKSTQIPQFLMDEISPMHKGA-IAV 128
L K R SLP + ++++ I + V I+ G TG GK+TQ+PQF++DE +K + V
Sbjct: 174 LQKVRNSLPASKYCDQVLKSISSCNVVIISGGTGCGKTTQVPQFILDEAHENNKHVRVMV 233
Query: 129 TQPRRVAAINLATRVAQEHGCRIGHEVGYSVRFDNKSHKTRTKLKYLTDGMLIRELMLDK 188
TQPRR+AAI++A RVA+E G IG VGY VR D++ T L Y T G+L+R L D
Sbjct: 234 TQPRRIAAISIAERVARERGEPIGRTVGYQVRLDSR-RSDDTVLTYCTTGVLLRMLTSDP 292
Query: 189 NLSNYKCIIIDEAHERTILTDLILGFLKELQLTKRKDLKVIVMSATLQAD--LFSKFFSN 246
S I++DE HER I TD +L L+E L R DLKVI+MSAT++ + LFS +F N
Sbjct: 293 VASGITHIVMDEIHEREINTDYLLIALREC-LKMRPDLKVILMSATIEGNMQLFSNYFEN 351
Query: 247 --APILFVEGRKFKVDRYYL 264
++ +E R F V +YL
Sbjct: 352 HSMDVIRIESRAFDVKVFYL 371
>CE13245 [A] KOG0922 DEAH-box RNA helicase
Length = 1019
Score = 148 bits (373), Expect = 3e-35
Identities = 124/454 (27%), Positives = 201/454 (43%), Gaps = 86/454 (18%)
Query: 236 QADLFSKFFSNAPILFVEGRKFKVDRYYL-PR-----PCEDIVDSVVRCSVQLNSSETTG 289
QA+ F +F+NA ++ V GR F ++ +++ P+ D V + V C ++ +E G
Sbjct: 432 QAEKFQSYFNNAKVVLVAGRTFPIEVFHVNPKINKSFSSTDYVYNAVICVKYVHLTEPKG 491
Query: 290 -DILCFLPGQEEIDKAVAILNKIIPYLDESVPRITAYPLYAALPPKDQAKVFE------- 341
DIL FL G EEI+ + L ++ L S + PLYAAL P+ Q + F
Sbjct: 492 RDILVFLTGSEEIEAVASQLAELNGSLPASADVLMPVPLYAALRPEKQKEAFRKTPQVWF 551
Query: 342 --------------------------------PLKGFK-------------RKIVLATNI 356
P G RK++++TNI
Sbjct: 552 RVKGKIGKSKIRKKDEKSKIFVARFFSRRCRHPCSGLSQKILLKFTFLSGARKVIISTNI 611
Query: 357 AETSVTIPGVKYVIDCGLRKVKVWRHQLGLATLLTVPVSKASVAQRAGRAGRESSGKCFR 416
AETSVTIPG++ VID G K K + + L VSKA QRAGRAGR++ GKC+R
Sbjct: 612 AETSVTIPGIRVVIDSGKVKTKRFEAFNRIDVLKVHNVSKAQAKQRAGRAGRDAPGKCYR 671
Query: 417 LFTEADYKQLPKQSESEITRCEITSPILMLKQYGVQDIVNWSWLEHPGKEAIISGLKELY 476
L++ D+ + ++ EI RC +++ L L + G+++ ++ P + I + L EL
Sbjct: 672 LYSREDFHKFEAENMPEILRCNLSATFLELMKLGMKNPHRLKLIDPPETDNINAALLELT 731
Query: 477 ELGAL------NEQGRVTDRGRKMALLPLAPHLSNVLIHAQETQVLPYVIDIVSCLSVEN 530
LGA+ + +T+ G + PL P + +L AQ+ + I IV+ + +
Sbjct: 732 SLGAIRPVNSDRSKFALTEMGDAFCMYPLPPDHARILFQAQKEGCIMEAIKIVAAMQTDA 791
Query: 531 LVLNPLPEERD-EVNERRRALCTLGSKHGDLIML----KELFDMY--------------Q 571
L + D +V+ RR T H L+ L + FD +
Sbjct: 792 LFSGAGDSKSDADVDRIRRRFETREGDHITLLKLVLVTNQFFDQLNKKTESDARYGKANK 851
Query: 572 SLQS--NSEKQEWCKQLCVSQRGFKNVIKVREQL 603
SL+ N +++C ++++ K + EQL
Sbjct: 852 SLEREYNQTIRKFCNDNMINEQHLKTASMIEEQL 885
Score = 143 bits (361), Expect = 8e-34
Identities = 81/198 (40%), Positives = 131/198 (65%), Gaps = 11/198 (5%)
Query: 74 RESLPVFQNKEKIVSHIKANPVTILIGETGSGKSTQIPQFLMDEISPMHKGAIAVTQPRR 133
R LP+ +++++ + + I+IGETGSGKSTQ+PQ + + G+IAVTQPRR
Sbjct: 158 RPQLPIDAVEQQLMYELASQETLIVIGETGSGKSTQVPQLCV-RAGIANSGSIAVTQPRR 216
Query: 134 VAAINLATRVAQEHGCRIGHEVGYSVRFDNKS-HKTRTKLKYLTDGMLIRELMLDKNLSN 192
VAAI+LA+RVA E G IG VGY VRF+N + HK TK++Y+TDG+++R+ ++ L
Sbjct: 217 VAAISLASRVATEMGTNIGGIVGYHVRFENATCHK--TKIEYMTDGIVLRKALVSPLLDK 274
Query: 193 YKCIIIDEAHERTILTDLILGFLKELQLTKRK---DLKVIVMSATLQADLFSKFFSNAPI 249
Y C+IIDEAHER++ +D+++ L++ Q +R+ L++I+MSATLQ + + ++
Sbjct: 275 YSCVIIDEAHERSLHSDVLMCILRQCQDQRRETNNPLRLIIMSATLQVIIIRRKIAHFST 334
Query: 250 LFVEG----RKFKVDRYY 263
+++ +KF+ + Y
Sbjct: 335 KYLKSLHSEQKFRFCKIY 352
>Hs19525735 [A] KOG0925 mRNA splicing factor ATP-dependent RNA helicase
Length = 599
Score = 144 bits (363), Expect = 5e-34
Identities = 120/465 (25%), Positives = 227/465 (48%), Gaps = 19/465 (4%)
Query: 151 IGHEVGYSVRFDNKSHKTRTKLKYLTDGMLIRELMLDKNLSNYKCIIIDEAHERTILTDL 210
+GHEVG S+ ++ + T L++ D +L++E+ + + +++DEA ER++ +D
Sbjct: 5 LGHEVGSSIPQEDCTGPN-TLLRFCWDRLLLQEVASTRGTGAWGVLVLDEAQERSVASDS 63
Query: 211 ILGFLKELQLTKRK-DLKVIVMSATLQADLFSKFFSNAPILFVEGRKF-KVDRYYLPRPC 268
+ G L++ +L K DL+V+V++ F+ N PI+ + + Y
Sbjct: 64 LQGLLQDARLEKLPGDLRVVVVTDPALEPKLRAFWGNPPIVHIPREPGERPSPIYWDTIP 123
Query: 269 EDIVDSVVRCSVQLNSSETTGDILCFLPGQEEIDKAVAILNKIIP--YLDESVPRITAYP 326
D V++ + ++L E GD+L FLP +EEI L++ + L PR+ P
Sbjct: 124 PDRVEAACQAVLELCRKELPGDVLVFLPSEEEISLCCESLSREVESLLLQGLPPRVL--P 181
Query: 327 LYAALPPKDQAKVFEPLKGFKRKIVLATNIAETSVTIPGVKYVIDCGLRKVKVWRHQLGL 386
L+ QA V+E + RK+V+ +A+ S ++P +++VID GL V+ ++
Sbjct: 182 LHPDCGRAVQA-VYEDMDA--RKVVVTHWLADFSFSLPSIQHVIDSGLELRSVYNPRIRA 238
Query: 387 ATLLTVPVSKASVAQRAGRAGRESSGKCFRLFTEADYK-QLPKQSESEITRCEITSPILM 445
+ P+SK R RA G C L+ ++ + + P + + ++S +L+
Sbjct: 239 EFQVLRPISKCQAEARRLRARGFPPGSCLCLYPKSFLELEAPPLPQPRVCEENLSSLVLL 298
Query: 446 LKQYGVQDIVNWSWLEHPGKEAIISGLKELYELGALNEQGRVTDRGRKMALLPLAPHLSN 505
LK+ + + +L+ P EA++ L++L L AL++ G ++D G ++ PLAP L+
Sbjct: 299 LKRRQIAEPGECHFLDQPAPEALMQALEDLDYLAALDDDGDLSDLGVILSEFPLAPELAK 358
Query: 506 VLIHAQETQVLPYVIDIVSCLSVENLVLNPLPEERDEVNERRRALCTLGSKHGDLIMLKE 565
L+ + E + ++ + + L+ P P +E RRAL H LI + E
Sbjct: 359 ALLASCEFDCVDEMLTLAAMLTAAPGFTRP-PLSAEEA-ALRRALEHTDGDHSSLIQVYE 416
Query: 566 LFDMYQSLQSNSEKQEWCKQLCVSQRGFKNVIKVREQLTGYMKRL 610
F +QS ++ + WC+ ++ K+R +L M+R+
Sbjct: 417 AF-----IQSGAD-EAWCQARGLNWAALCQAHKLRGELLELMQRI 455
>At1g33390 [AJ] KOG0926 DEAH-box RNA helicase
Length = 1237
Score = 142 bits (357), Expect = 2e-33
Identities = 94/281 (33%), Positives = 149/281 (52%), Gaps = 39/281 (13%)
Query: 65 TRALRLLKGRESLPVFQNKEKIVSHIKANPVTILIGETGSGKSTQIPQFLMD-----EIS 119
+R + + R+ LP+ +++I+ I +P I+ G+TG GK+TQ+PQFL + +
Sbjct: 229 SRPAEVEETRKDLPIVMMEQEIMEAINRHPAVIISGQTGCGKTTQVPQFLYEAGFGSKQF 288
Query: 120 PMHKGAIAVTQPRRVAAINLATRVAQEHGCRIGHEVGYSVRFDNKSHKTRTKLKYLTDGM 179
G I +TQPRRVA + A RVA E G R+G EVG+ VR+D K + + +K++TDG+
Sbjct: 289 SSRSGIIGITQPRRVAVLATAKRVAFELGVRLGKEVGFQVRYDKKIGEN-SSIKFMTDGI 347
Query: 180 LIRELMLDKNLSNYKCIIIDEAHERTILTDLILGFL------------------------ 215
L+RE+ D L Y II+DEAHER++ TD+++G L
Sbjct: 348 LLREIQNDFLLRRYSVIILDEAHERSLNTDILIGMLTRVIKIRQEYYEEQQKSLQSGGTV 407
Query: 216 -KELQLTKRKDLKVIVMSATLQADLF---SKFFSN-APILFVEGRKFKVDRYYLPR-PCE 269
E Q+T LK+I+MSATL+ + F + F N P++ V R++ V ++ +
Sbjct: 408 TSECQIT---PLKLILMSATLRVEDFVSGKRLFPNIPPLIEVPTRQYPVTIHFSKKTEIV 464
Query: 270 DIVDSVVRCSVQLNSSETTGDILCFLPGQEEIDKAVAILNK 310
D + + + ++ G IL F+ GQ E+D L K
Sbjct: 465 DYIGEAYKKVMSIHKKLPQGGILVFVTGQREVDYLCEKLRK 505
Score = 135 bits (339), Expect = 3e-31
Identities = 124/474 (26%), Positives = 219/474 (46%), Gaps = 66/474 (13%)
Query: 300 EIDKAVAILNKIIPYLDESVPRITAYPLYAALPPKDQAKVFEPLKGFKRKIVLATNIAET 359
E +A + NK P ++ PLYA L P Q +VFE ++ +R +V+ATN+AET
Sbjct: 631 ENQEAEQVKNKFSP------GKLRVLPLYAMLSPAAQLRVFEEVEKEERLVVVATNVAET 684
Query: 360 SVTIPGVKYVIDCGLRKVKVWRHQLGLATLLTVPVSKASVAQRAGRAGRESSGKCFRLFT 419
S+TIPG+KYV+D G KVK + + G+ + +S+AS +QRAGRAGR G C+RL++
Sbjct: 685 SLTIPGIKYVVDTGRVKVKNYDSKTGMESYEVDWISQASASQRAGRAGRTGPGHCYRLYS 744
Query: 420 EADYKQLPKQSE-SEITRCEITSPILMLKQYGVQDIVNWSWLEHPGKEAIISGLKELYEL 478
A + + ++S EI + + IL++K + + N+ + P AI + L L
Sbjct: 745 SAVFSNIFEESSLPEIMKVPVDGVILLMKSMNIPKVENFPFPTPPEPSAIREAERCLKAL 804
Query: 479 GALNEQGRVTDRGRKMALLPLAPHLSNVLI-----------HAQETQVLPYVIDIVSCLS 527
AL+ G +T G+ M+ P++P S +L+ +++ +L Y + V+ LS
Sbjct: 805 EALDSNGGLTPLGKAMSHYPMSPRHSRMLLTVIQMLKETRNYSRANLILGYAVAAVAALS 864
Query: 528 VENLVLNPLPEERDEVNERRRALCTLGS-----KHGDLIMLKELFDMY------------ 570
+ N ++ + E ++ NE + A T+ K +K D +
Sbjct: 865 LPNPLI--MEFEGEKKNESKDADKTVKQEDKQRKKDRKEKIKAARDRFSNPSSDALTVAY 922
Query: 571 --QSLQSNSEKQEWCKQLCVSQRGFKNVIKVREQLTGYMKRLYN--EPVEIK-------- 618
S + + +C+ + + + K+++QL ++ ++N +P E +
Sbjct: 923 ALHSFEVSENGMGFCEANGLHLKTMDEMSKLKDQL---LRLVFNCCKPSETEDSFSWTHG 979
Query: 619 TKQDT-----LQPEEDIATNLLQ-PPDIAGVLKCFLYGFVKNTAIGMPDKSFRTTPTGEP 672
T QD + T LLQ ++ G C G+ A ++ EP
Sbjct: 980 TIQDVEKSWRITTSTSSKTPLLQNEEELLGEAIC--AGWADRVARKTRATEYQACAVQEP 1037
Query: 673 ISIHPSSMLFMNSGDEIGPCPAILYIEHVFTTKGYARSVSRIELAWLQEIASGV 726
+ +H S L +NS E+ ++Y E + T + Y +R+ WL + A +
Sbjct: 1038 VFLHRWSSL-INSAPEL-----LVYSELLLTNRPYMHGATRVRPEWLVKHAKSL 1085
>At1g06670 [A] KOG0920 ATP-dependent RNA helicase A
Length = 1576
Score = 139 bits (349), Expect = 2e-32
Identities = 107/360 (29%), Positives = 176/360 (48%), Gaps = 15/360 (4%)
Query: 259 VDRYYLP-RPCEDIVDSVVRCSVQLNSSETTGDILCFLPGQEEIDKAVAILNKIIPYLDE 317
+D+Y +P E V +V+ ++ S G IL FLPG EEI K L LD+
Sbjct: 545 LDKYMATIKPEEVDVGLIVKLMKKICSDSKDGAILVFLPGWEEISKTKEKL------LDD 598
Query: 318 SV----PRITAYPLYAALPPKDQAKVFEPLKGFKRKIVLATNIAETSVTIPGVKYVIDCG 373
+ L++ +P ++Q KVF RKIVLATNIAE++VTI V YVID G
Sbjct: 599 RFFAHSAKFIILCLHSRVPAEEQKKVFNRPPRGCRKIVLATNIAESAVTIDDVVYVIDSG 658
Query: 374 LRKVKVWRHQLGLATLLTVPVSKASVAQRAGRAGRESSGKCFRLFTEADYKQLPKQSESE 433
K K + ++TL + VSKA+ QRAGRAGR +G C+ L+++ LP+ E
Sbjct: 659 RMKEKSYDPYNDVSTLQSSWVSKANAKQRAGRAGRCQAGICYHLYSKLRAASLPEYRVPE 718
Query: 434 ITRCEITSPILMLKQYGVQDIVN---WSWLEHPGKEAIISGLKELYELGALNEQGRVTDR 490
+ R + L +K VN ++ P ++I + L L ++GAL + +T+
Sbjct: 719 VMRMPVDELCLQVKMLDPNCNVNDFLQKLMDPPVAQSIENALIILKDIGALTPEEELTEL 778
Query: 491 GRKMALLPLAPHLSNVLIHAQETQVLPYVIDIVSCLSVENLVLNPL-PEERDEVNERRRA 549
G+K LP+ P +S ++ A L + + ++ PL P +R + +
Sbjct: 779 GQKFGQLPVHPRISKMIYFAILVNCLDPALILACAADEKDPFTMPLSPGDRKKAAAAKHE 838
Query: 550 LCTLGSKHGDLIMLKELFDMYQSLQSNSEKQEWCKQLCVSQRGFKNVIKVREQLTGYMKR 609
L +L H D + F +++ +++ + +E+C + +SQ K + + +L G + R
Sbjct: 839 LASLYGDHSDHLATVAAFQCWKNAKASGQAKEFCSKYFISQVVMKRLDDLCRKLQGELNR 898
Score = 133 bits (334), Expect = 1e-30
Identities = 76/213 (35%), Positives = 133/213 (61%), Gaps = 8/213 (3%)
Query: 58 VSNKELKTRALR-LLKGRESLPVFQNKEKIVSHIKANPVTILIGETGSGKSTQIPQFLMD 116
+S++ K R R + + R LP+ ++ I+S +++N V ++ GETG GK+TQ+PQ+L+D
Sbjct: 197 LSSRLKKERHFREIFEARSKLPIASFRDAIISAVESNQVVLIAGETGCGKTTQVPQYLLD 256
Query: 117 EISPMHKGA--IAVTQPRRVAAINLATRVAQEHGCRIGHEVGYSVRFDNKSHKTRTKLKY 174
+ K A I TQPRR++AI+++ R++ E G IG VGY VR ++ + + + +
Sbjct: 257 HMWHSKKEACKIICTQPRRISAISVSDRISWERGETIGRTVGYKVRLQSEGGR-ESSVVF 315
Query: 175 LTDGMLIRELM---LDKNLSNYKCIIIDEAHERTILTDLILGFLKELQLTKRKDLKVIVM 231
T+G+L+R L+ ++ ++ + II+DE HER +D +L L++L L L++I+M
Sbjct: 316 CTNGILLRVLIGKGVNSSVPDITHIIVDEIHERDSYSDFMLMILRDL-LPSNPHLRLILM 374
Query: 232 SATLQADLFSKFFSNAPILFVEGRKFKVDRYYL 264
SATL A+ FS++F P++ V G + V ++L
Sbjct: 375 SATLDAERFSEYFGGCPVVRVPGFTYPVRTFFL 407
>7292962 [A] KOG0924 mRNA splicing factor ATP-dependent RNA helicase
Length = 676
Score = 137 bits (346), Expect = 4e-32
Identities = 68/157 (43%), Positives = 112/157 (71%), Gaps = 2/157 (1%)
Query: 65 TRALRLLKGRESLPVFQNKEKIVSHIKANPVTILIGETGSGKSTQIPQFLMDEISPMHKG 124
+R + + R LPVF +++++++ I+ N V I++GETGSGK+TQ+ Q+L ++ +G
Sbjct: 522 SRKKTISEQRRFLPVFASRQELLNVIRENSVIIIVGETGSGKTTQLTQYLHED-GYSKRG 580
Query: 125 AIAVTQPRRVAAINLATRVAQEHGCRIGHEVGYSVRFDNKSHKTRTKLKYLTDGMLIREL 184
I TQPRRVAA+++A RV+ E ++G +VGY++RF++ + + RT +KY+TDG+L+RE
Sbjct: 581 MIGCTQPRRVAAMSVAKRVSDEMDTQLGEDVGYAIRFEDCTSE-RTVIKYMTDGILLRES 639
Query: 185 MLDKNLSNYKCIIIDEAHERTILTDLILGFLKELQLT 221
+ D L +Y II+DEAHER++ TD++ G L+E T
Sbjct: 640 LRDPELDSYSAIIMDEAHERSLSTDVLFGLLREAHST 676
>Hs20536957 [A] KOG0920 ATP-dependent RNA helicase A
Length = 688
Score = 135 bits (339), Expect = 3e-31
Identities = 123/484 (25%), Positives = 222/484 (45%), Gaps = 47/484 (9%)
Query: 270 DIVDSVVRCSVQLNSSETTGDILCFLPGQEEIDKAVAILNKIIPYLDESVPRITAYPLYA 329
+++++++ V S G IL FLPG EI L + + R +PL++
Sbjct: 131 ELIEALLEWIVDGKHSYPPGAILVFLPGLAEIKMLYEQLQSNSLFNNRRSNRCVIHPLHS 190
Query: 330 ALPPKDQAKVFEPLKGFKRKIVLATNIAETSVTIPGVKYVIDCGLRKVKVWRHQLGLATL 389
+L ++Q VF KI+++TNIAETS+TI V YVID G K K + G+ +L
Sbjct: 191 SLSSEEQQAVFVKPPAGVTKIIISTNIAETSITIDDVVYVIDSGKMKEKRYDASKGMESL 250
Query: 390 LTVPVSKASVAQRAGRAGRESSGKCFRLFTEADYK-QLPKQSESEITRCEITSPILMLK- 447
VS+A+ QR GRAGR +SG CF LFT Y QL KQ EI R + L +K
Sbjct: 251 EDTFVSQANALQRKGRAGRVASGVCFHLFTSHHYNHQLLKQQLPEIQRVPLEQLCLRIKI 310
Query: 448 -----QYGVQDIVNWSWLEHPGKEAIISGLKELYELGALNEQGRVTDRGRKMALLPLAPH 502
+ +Q + + +E P +++ + L +LGAL R+T G +A LP+
Sbjct: 311 LEMFSAHNLQSVFS-RLIEPPHTDSLRASKIRLRDLGALTPDERLTPLGYHLASLPVDVR 369
Query: 503 LSNVLIHAQETQVLPYVIDIVSCLSVENLVLNPLPEERDEVNERRRALCTLGSKHGDLIM 562
+ +++ + L + I + L+ ++ ++P ++++E N+++ S D +
Sbjct: 370 IGKLMLFGSIFRCLDPALTIAASLAFKSPFVSPW-DKKEEANQKKLEFAFANS---DYLA 425
Query: 563 LKELFDMYQ--SLQSNSEKQEWCKQLCVSQRGFKNVIKVREQLTGYMKRLYNEPVEIKTK 620
L + + +Q + + +C+Q +S R + + ++ Q T + + ++ +
Sbjct: 426 LLQAYKGWQLSTKEGVRASYNYCRQNFLSGRVLQEMASLKRQFTELLSDIGFAREGLRAR 485
Query: 621 QDTLQPE----------EDIATNLLQPPDIAGVLKCFLYGFVKNTAIGMPDKSFRTTPTG 670
+ + + E+ +N P I+ +L LY V + P+ F+ T TG
Sbjct: 486 EIEKRAQGGDGVLDATGEEANSNAENPKLISAMLCAALYPNV--VQVKSPEGKFQKTSTG 543
Query: 671 ----EP--------------ISIHPSSMLFMNSGDEIGPCPAILYIEHVFTTKGYARSVS 712
+P + IHPSS+ + + P +LY E + T++ + R S
Sbjct: 544 AVRMQPKSAELKFVTKNDGYVHIHPSSVNYQVRHFD---SPYLLYHEKIKTSRVFIRDCS 600
Query: 713 RIEL 716
+ +
Sbjct: 601 MVSV 604
>At2g30800 [A] KOG0920 ATP-dependent RNA helicase A
Length = 1299
Score = 135 bits (339), Expect = 3e-31
Identities = 117/400 (29%), Positives = 180/400 (44%), Gaps = 18/400 (4%)
Query: 289 GDILCFLPGQEEIDKAVAILNKIIPYLDESVPRITAYPLYAALPPKDQAKVFEPLKGFKR 348
G IL FLPG ++I+K L + P+ +S + L++ +P +Q KVF R
Sbjct: 552 GAILVFLPGWDDINKTRQRLLEN-PFFADSA-KFDIICLHSMVPAGEQKKVFNRPPPGCR 609
Query: 349 KIVLATNIAETSVTIPGVKYVIDCGLRKVKVWRHQLGLATLLTVPVSKASVAQRAGRAGR 408
KIVLATNIAE++VTI V YVID G K K + ++TL + VSKA+ QR GRAGR
Sbjct: 610 KIVLATNIAESAVTIDDVVYVIDSGRMKEKSYDPYNNVSTLQSSWVSKANAKQRQGRAGR 669
Query: 409 ESSGKCFRLFTEADYKQLPKQSESEITRCEITSPILMLKQYGVQDIVN---WSWLEHPGK 465
G C+ L++ +P EI R + L +K N L+ P
Sbjct: 670 CQPGICYHLYSRLRAASMPDFKVPEIKRMPVEELCLQVKILDPNCKTNDFLQKLLDPPVD 729
Query: 466 EAIISGLKELYELGALNEQGRVTDRGRKMALLPLAPHLSNVLIHAQETQVLPYVIDIVSC 525
++I + L L ++GAL Q +T+ G K LP+ P +S +L A L + +
Sbjct: 730 QSIANALSILQDIGALTPQEELTELGEKFGHLPVHPLISKMLFFAVLVNCLDPALTLACA 789
Query: 526 LSVENLVLNPL-PEERDEVNERRRALCTLGSKHGDLIMLKELFDMYQSLQSNSEKQEWCK 584
+ P+ P ER + + L +L D + + F+ +++ + E+C
Sbjct: 790 ADYKEPFTMPMSPVERQKAAAAKLELASLCGGDSDHLAVVAAFECWKNAKGRGLSAEFCS 849
Query: 585 QLCVSQRGFKNVIKVREQLTGYMKRLYNEPVEIKTKQDTLQPEEDIATNLLQPPDIAGVL 644
Q VS K + ++R QL +KR P +I + + N P + VL
Sbjct: 850 QYFVSPSAMKMLDQMRSQLESELKRHGIIPNDISS----------CSQNSRDPGILRAVL 899
Query: 645 KCFLYGFVKN--TAIGMPDKSFRTTPTGEPISIHPSSMLF 682
LY V A G ++ T +G + +H S F
Sbjct: 900 AVGLYPMVGRLCPAFGNNRRTIVETASGAKVRVHSLSNNF 939
Score = 132 bits (332), Expect = 2e-30
Identities = 78/218 (35%), Positives = 132/218 (59%), Gaps = 8/218 (3%)
Query: 53 EALDHVSNKELKTRALR-LLKGRESLPVFQNKEKIVSHIKANPVTILIGETGSGKSTQIP 111
E + +S++ K +AL+ + K R LP+ K+ I S +++N V ++ GETG GK+TQ+P
Sbjct: 162 EKVASLSSRLKKDKALKEITKLRSKLPITSFKDAITSAVESNQVILISGETGCGKTTQVP 221
Query: 112 QFLMDEI--SPMHKGAIAVTQPRRVAAINLATRVAQEHGCRIGHEVGYSVRFDNKSHKTR 169
Q+L+D + S I TQPRR++A++++ R++ E G IG +GY VR +K +
Sbjct: 222 QYLLDHMWSSKRETCKIVCTQPRRISAMSVSERISCERGESIGENIGYKVRLQSKGGR-H 280
Query: 170 TKLKYLTDGMLIRELM---LDKNLSNYKCIIIDEAHERTILTDLILGFLKELQLTKRKDL 226
+ + + T+G+L+R L+ ++S+ II+DE HER +D +L +++L L L
Sbjct: 281 SSVVFCTNGILLRVLVGKGSVSSVSDITHIIVDEIHERDCYSDFMLAIIRDL-LPSNPHL 339
Query: 227 KVIVMSATLQADLFSKFFSNAPILFVEGRKFKVDRYYL 264
++I+MSATL A+ FS +F P++ V G + V YL
Sbjct: 340 RLILMSATLDAERFSGYFGGCPVVRVPGFTYPVRTLYL 377
>At1g58050 [A] KOG0920 ATP-dependent RNA helicase A
Length = 1417
Score = 130 bits (327), Expect = 7e-30
Identities = 87/227 (38%), Positives = 128/227 (56%), Gaps = 22/227 (9%)
Query: 60 NKELKTRALRLLKGRESLPVFQNKEKIVSHIKANPVTILIGETGSGKSTQIPQFLMDEIS 119
NK+ + +LK R +LP+ + K+ I+ +K V ++ GETGSGK+TQ+PQF++D++
Sbjct: 580 NKKKMQKYKDMLKTRAALPISEVKKDILQKLKEKDVLVVCGETGSGKTTQVPQFILDDMI 639
Query: 120 PMHKGA---IAVTQPRRVAAINLATRVAQEHGCR-----IGHEVGYSVRFDNKSHKTRTK 171
G I TQPR AI +A RVA E C V Y VR N + +T+
Sbjct: 640 DSGHGGYCNIICTQPR---AITVAQRVADER-CEPPPGFDNSVVAYQVRHQN-ARSDKTR 694
Query: 172 LKYLTDGMLIRELMLDKNLSNYKCIIIDEAHERTILTDLILGFLKELQLTKRKD-----L 226
L + T G+L+R+L+ D L + II+DE HER+++ D +L LK L + D L
Sbjct: 695 LLFCTTGILLRKLVGDTTLKDVTHIIVDEVHERSLMGDFLLIILKSLIEKQSWDNALPKL 754
Query: 227 KVIVMSATLQADLFSKFFSNAPILFVEGRKFKVDRYYLPRPCEDIVD 273
KVI+MSAT+ A FS++F PI+ +GR V Y+L EDI +
Sbjct: 755 KVILMSATVDAHQFSRYFGQCPIITAQGRTHPVTTYFL----EDIYE 797
Score = 117 bits (294), Expect = 5e-26
Identities = 95/292 (32%), Positives = 148/292 (50%), Gaps = 15/292 (5%)
Query: 270 DIVDSVVRCSVQLNSSETTGDILCFLPGQEEIDKAVAILNKIIP-YLDESVPRITAYPLY 328
D+++ ++ C + E G IL FLPG EI+ +LN++ Y PL+
Sbjct: 867 DLLEELI-CHIDDTCEE--GAILVFLPGMSEINM---LLNRLAASYRFRGASGDWLLPLH 920
Query: 329 AALPPKDQAKVF-EPLKGFKRKIVLATNIAETSVTIPGVKYVIDCGLRKVKVWRHQLGLA 387
+++ +Q KVF P KG RK+++ATNIAETS+TI V YVID G K + L+
Sbjct: 921 SSIASTEQKKVFLRPPKGI-RKVIIATNIAETSITIEDVVYVIDSGKHKENRYNPHKKLS 979
Query: 388 TLLTVPVSKASVAQRAGRAGRESSGKCFRLFTEADYKQLPKQSE-SEITRCEITSPILML 446
+++ VSKA+ QR GRAGR G CF L+T +++L + + E+ R + L +
Sbjct: 980 SMVEDWVSKANARQRMGRAGRVKPGHCFSLYTRHRFEKLMRPYQVPEMLRVPLVELCLHI 1039
Query: 447 KQYGVQDIVNW--SWLEHPGKEAIISGLKELYELGALNEQGRVTDRGRKMALLPLAPHLS 504
K G+ I + LE P + AI S + L+++GAL +T G +A LP+ +
Sbjct: 1040 KLLGLGQIKPFLSKALEPPSESAINSAILLLHKVGALEGDEELTPLGHHLAKLPVDLLIG 1099
Query: 505 NVLIHAQETQVLPYVIDIVSCLSVENLVLNPLPEERDEVNERRRALCTLGSK 556
+L++ L ++ I + LS +P +DE N R L L K
Sbjct: 1100 KMLLYGGIFGCLSPILSIAAFLS---CCKSPFVYAKDEQNVDRVKLALLSDK 1148
>At5g14900 [A] KOG0925 mRNA splicing factor ATP-dependent RNA helicase
Length = 301
Score = 89.7 bits (221), Expect = 1e-17
Identities = 67/287 (23%), Positives = 125/287 (43%), Gaps = 30/287 (10%)
Query: 439 ITSPILMLKQYGVQDIVNWSWLEHPGKEAIISGLKELYELGALNEQGRVTDRGRKMALLP 498
+ + +L LK V+++V + ++ P + + L +LY LGAL++ +T G M+ P
Sbjct: 4 LANTVLTLKGLSVKNLVRFDLIDSPAPDTLARALDDLYHLGALDDDCNLTKTGEMMSEFP 63
Query: 499 LAPHLSNVLIHAQETQVLPYVIDIVSCLSVENLVLNPLPEERDEVNERRRALCTLGSKHG 558
L P ++ +LI + + ++ I + LSV N + P E + +E + + + H
Sbjct: 64 LDPQMAKMLIVSPQFNCSNEILSISAMLSVPNCFIRPRGEAQKAADEAKSSFAHIDGDH- 122
Query: 559 DLIMLKELFDMYQSLQSNSEKQEWCKQLCVSQRGFKNVIKVREQLTGYMKRLYNEPVEIK 618
L +++ + N++ WC ++ R K+ + VREQL M R +IK
Sbjct: 123 -----LTLLNLFHAFLQNNQDPNWCCTKFINYRAMKSAVSVREQLVRIMLRF-----QIK 172
Query: 619 TKQDTLQPEEDIATNLLQPPDIAGVLKCFLYGFVKNTAIGMPDKSFRT--TPTGEPISIH 676
D N + K L G+ A + T + + +H
Sbjct: 173 LCSPDFN-SRDYYVN---------IRKALLAGYFMQVAHLERTGHYLTFRDKDDQVVHLH 222
Query: 677 PSSMLFMNSGDEIGPCPAILYIEHVFTTKGYARSVSRIELAWLQEIA 723
PS+ L ++Y E+VFT++ + R+V+ I WL ++A
Sbjct: 223 PSNCLDHKP-------EWVVYNEYVFTSRNFIRTVTHIRGEWLVDVA 262
>HsM13375825 [A] KOG0922 DEAH-box RNA helicase
Length = 294
Score = 78.6 bits (192), Expect = 3e-14
Identities = 60/231 (25%), Positives = 100/231 (42%), Gaps = 23/231 (9%)
Query: 494 MALLPLAPHLSNVLIHAQETQVLPYVIDIVSCLSVENLVLNPL-PEERDEVNERRRALCT 552
M PL PHL+ +I A ++ I + LSVEN+ + P+ PE + E +R R L
Sbjct: 1 MVEFPLPPHLTCAVIKAASLDCEDLLLPIAAMLSVENVFIRPVDPEYQKEAEQRHRELAA 60
Query: 553 LGSKHGDLIMLKELFDMYQSLQSNSEKQEWCKQLCVSQRGFKNVIKVREQLTGYMKRLYN 612
D L +F + +S+ WC++ + R + +V QL +++
Sbjct: 61 KAGGFNDFATLAVIF---EQCKSSGAPASWCQKHWIHWRCLFSAFRVEAQLRELIRK--- 114
Query: 613 EPVEIKTKQDTLQPEEDIATNLLQPPDIAGVLKCFLYGFVKNTAIGMPDKSFRTTP-TGE 671
L+ + D + P + +C G+ KN A ++F T G
Sbjct: 115 -----------LKQQSDFPKETFEGPKHEVLRRCLCAGYFKNVARRSVGRTFCTMDGRGS 163
Query: 672 PISIHPSSMLFMNSGDEIGPCPAILYIEHVFTTKGYARSVSRIELAWLQEI 722
P+ IHPSS L ++ I++ E + TTK YAR V I W++++
Sbjct: 164 PVHIHPSSALH----EQETKLEWIIFHEVLVTTKVYARIVCPIRYEWVRDL 210
>Hs22052719 [K] KOG0921 Dosage compensation complex subunit MLE
Length = 688
Score = 74.7 bits (182), Expect = 5e-13
Identities = 57/184 (30%), Positives = 95/184 (50%), Gaps = 4/184 (2%)
Query: 335 DQAKVFEPLKGFKRKIVLATNIAETSVTIPGVKYVIDCGLRKVKVWRHQLGLATLLTVPV 394
+Q KVF+P+ K++L+TNIAETS+ I V YV+D +KVK++ + TV
Sbjct: 298 EQRKVFDPVPVGVTKVILSTNIAETSIIINDV-YVVDSCKQKVKLFATHNNMTNYATVWG 356
Query: 395 SKASVAQRAGRAGRESSGKCFRLFTEADYKQLPKQSESEITRCEITSPILMLKQYGVQDI 454
SK ++ Q G+ GR G CF L + A +++L E+ + + L +K + I
Sbjct: 357 SKTNLEQWKGQPGRIRPGFCFHLCSRARFERLETHMTPEMFQTPLHEVALSIKLPCLVGI 416
Query: 455 VNW--SWLEHPGKEAIISGLKELYELGALNEQGRVTDRGRKMALLPLAPHLSNVLIHAQE 512
+ +E +A+I L EL AL+ +T GR +A L + P ++I ++
Sbjct: 417 GQFLAKAIETLPLDAVIEAEHTLRELDALDANDDLTPLGRILANLLIEPRFGKMMI-MEK 475
Query: 513 TQVL 516
T++L
Sbjct: 476 TKIL 479
>Hs22061649 [K] KOG0921 Dosage compensation complex subunit MLE
Length = 324
Score = 53.1 bits (126), Expect = 1e-06
Identities = 31/112 (27%), Positives = 58/112 (51%), Gaps = 15/112 (13%)
Query: 128 VTQPRRVAAINLATRVAQEHGCRIGHEVGYSVRFDNKSHKTRTKLKYLTDGMLIRELMLD 187
+ QPRR++A+++A RVA E G G GY+VR ++ + + + T G+
Sbjct: 120 IPQPRRISAVSVAERVAFERGEETGKSCGYTVRIESVLPRFHASITFCTVGI-------- 171
Query: 188 KNLSNYKCIIIDEAHERTILTDLILGFLKELQLTKRKDLKVIVMSATLQADL 239
+ + E HER I TD +L L+++ ++ +++MSAT+ ++
Sbjct: 172 ------SHVTVGEIHERDINTDFLLIVLRDV-FQAYPEVHIVLMSATIDTNI 216
Database: KOG eukaryal database 04/03
Posted date: Apr 14, 2003 1:07 PM
Number of letters in database: 30,389,216
Number of sequences in database: 60,738
Lambda K H
0.319 0.136 0.390
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 42,132,762
Number of Sequences: 60738
Number of extensions: 1795711
Number of successful extensions: 5750
Number of sequences better than 1.0e-05: 89
Number of HSP's better than 0.0 without gapping: 84
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 5143
Number of HSP's gapped (non-prelim): 135
length of query: 732
length of database: 30,389,216
effective HSP length: 114
effective length of query: 618
effective length of database: 23,465,084
effective search space: 14501421912
effective search space used: 14501421912
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)