ORF      STATUS       Function Best COG  Functional category                                          Pathways and functional systems
r_klactVI7070   suspect: LH   D     KOG3004  Cell cycle control, cell division, chromosome partitioning     Meiotic  chromosome segregation protein

BLASTP 2.2.3 [May-13-2002]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= r_klactVI7070 2465277 2464381 -299 
         (299 letters)

Database: KOG eukaryal database 04/03 
           60,738 sequences; 30,389,216 total letters

Searching..................................................done

Color Key for Alignment Scores:   


                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

YMR048w [D] KOG3004 Meiotic  chromosome segregation protein           151   1e-36
Hs8923485 [D] KOG3004 Meiotic  chromosome segregation protein          51   2e-06

>YMR048w [D] KOG3004 Meiotic  chromosome segregation protein
          Length = 317

 Score =  151 bits (382), Expect = 1e-36
 Identities = 84/161 (52%), Positives = 107/161 (66%), Gaps = 13/161 (8%)

Query: 30  DPTV-NGLDPSMTSTTDGQDPTLISTNTRKPRVKLTAEKLLSTKGLPYVMEHAPKSCRIS 88
           DPTV NGLD S+   T   DPT I+   R+P+VKLTAEKLLS KGLPYV+++A K  RIS
Sbjct: 21  DPTVPNGLDGSVVDPTIA-DPTAITARKRRPQVKLTAEKLLSDKGLPYVLKNAHKRIRIS 79

Query: 89  KHKTAYDNLTNFLQFYQLWAHNLYPKAKFKDFTSLCESLGKTDKELREYRMNLVRKDMGI 148
             K +YDNL+N +QFYQLWAH L+PKAKFKDF  +C+++GKTD  LREYR++L R +MG+
Sbjct: 80  SKKNSYDNLSNIIQFYQLWAHELFPKAKFKDFMKICQTVGKTDPVLREYRVSLFRDEMGM 139

Query: 149 LLGDDIPNVPDMQMHDTGVLPAHQGRNSLFVTDESTSATDR 189
                     D+   +TG       R S  V +  TSA +R
Sbjct: 140 SF--------DVGTRETG---QDLERQSPMVEEHVTSAEER 169


>Hs8923485 [D] KOG3004 Meiotic  chromosome segregation protein
          Length = 301

 Score = 51.2 bits (121), Expect = 2e-06
 Identities = 43/162 (26%), Positives = 75/162 (45%), Gaps = 11/162 (6%)

Query: 35  GLDPSMTSTTDGQDPTLISTNTRKPRVKLTAEKLLSTKGLPYVMEHAPKSCRISKHKTAY 94
           G +P   S      P       ++   KL A++L+S +GLP  + H     +        
Sbjct: 39  GTEPDEESGNGAPVPVPPKRTVKRNIPKLDAQRLISERGLP-ALRHVFDKAKFKGKGHEA 97

Query: 95  DNLTNFLQFYQLWAHNLYPKAKFKDFTSLCESLGKTDKELREYRMNLVRKDMGILLGDDI 154
           ++L   ++  + WAH L+PK +F+DF    E LG + KE++   +  +R D+ IL  D +
Sbjct: 98  EDLKMLIRHMEHWAHRLFPKLQFEDFIDRVEYLG-SKKEVQTC-LKRIRLDLPILHEDFV 155

Query: 155 PN---VPDMQMHD---TGVLP--AHQGRNSLFVTDESTSATD 188
            N   V +   HD   T + P   +   + +F ++ S S T+
Sbjct: 156 SNNDEVAENNEHDVTSTELDPFLTNLSESEMFASELSRSLTE 197


  Database: KOG eukaryal database 04/03
    Posted date:  Apr 14, 2003  1:07 PM
  Number of letters in database: 30,389,216
  Number of sequences in database:  60,738
  
Lambda     K      H
   0.313    0.129    0.368 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 16,882,495
Number of Sequences: 60738
Number of extensions: 666159
Number of successful extensions: 1537
Number of sequences better than 1.0e-05: 2
Number of HSP's better than  0.0 without gapping: 1
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 1536
Number of HSP's gapped (non-prelim): 2
length of query: 299
length of database: 30,389,216
effective HSP length: 106
effective length of query: 193
effective length of database: 23,950,988
effective search space: 4622540684
effective search space used: 4622540684
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)