ORF      STATUS       Function Best COG  Functional category                                          Pathways and functional systems
r_klactVI7110   suspect: LH   V     KOG1962  Defense mechanisms                                             B-cell receptor-associated protein and related proteins

BLASTP 2.2.3 [May-13-2002]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= r_klactVI7110 2477782  2478402 207  
         (207 letters)

Database: KOG eukaryal database 04/03 
           60,738 sequences; 30,389,216 total letters

Searching..................................................done

Color Key for Alignment Scores:   


                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

YKL065c [V] KOG1962 B-cell receptor-associated protein and relat...   144   1e-34
YMR040w [V] KOG1962 B-cell receptor-associated protein and relat...   105   4e-23

>YKL065c [V] KOG1962 B-cell receptor-associated protein and related proteins
          Length = 206

 Score =  144 bits (362), Expect = 1e-34
 Identities = 77/195 (39%), Positives = 117/195 (59%), Gaps = 12/195 (6%)

Query: 1   MSIYFSVLFILLVAQMAFMFMIVMPLHYQIRKRLVVFSDNFLSGPQFRTVVAILSCLVML 60
           MS+YF+ LF+LL  ++  +F+ V+PL ++IR+ +    +   +  Q +T++ I  CLV L
Sbjct: 1   MSLYFTTLFLLLTVEVVMLFIFVLPLPFRIRRGIFSTYNQLTAKQQIKTIIFITGCLVGL 60

Query: 61  LFIDSWKRAQLPV-FSHAEKPQDVASS----LKTLTTRAYNQRNVYISGFILYFTICIPV 115
           LFIDSWKR+Q+ V   H +    + SS    ++ L +RAYNQRN+YISGFILYF+ICIP 
Sbjct: 61  LFIDSWKRSQIRVSLYHNDNSGSIGSSAVTPIQALASRAYNQRNMYISGFILYFSICIPT 120

Query: 116 LLNLLTRLVKYETLIRELNSVPAXXXXXXXXXXXXXXXXXXXSPQLTALQKELESKKVSL 175
           +++++ RLVKY+ LI E                             T LQ+EL  K++SL
Sbjct: 121 VMSIVKRLVKYQGLINEQEK-------QKLNKPSSNSKKDSNEADSTKLQEELRKKQISL 173

Query: 176 KALKIQINNLNEHFD 190
           + L+ Q+ NL ++FD
Sbjct: 174 EGLQKQVKNLEKYFD 188


>YMR040w [V] KOG1962 B-cell receptor-associated protein and related proteins
          Length = 160

 Score =  105 bits (262), Expect = 4e-23
 Identities = 54/130 (41%), Positives = 86/130 (65%), Gaps = 4/130 (3%)

Query: 1   MSIYFSVLFILLVAQMAFMFMIVMPLHYQIRKRLVVFSDNFLSGPQFRTVVAILSCLVML 60
           M +Y +VLF LLV +MA +F++V+PL  ++R+ L +      +  +FRT +  +   V L
Sbjct: 1   MGVYLAVLFSLLVIEMAILFILVLPLPQRMRRWLYIRYSIISTNKKFRTYMVGIMIFVGL 60

Query: 61  LFIDSWKRAQLPVFSHAEKPQ----DVASSLKTLTTRAYNQRNVYISGFILYFTICIPVL 116
           LFIDSWKR+Q+ V ++  +      +  + +  L +RAYNQRNVYISGFI+YF ICI  +
Sbjct: 61  LFIDSWKRSQIRVSTYRNQKNPYIINSVTPVDALASRAYNQRNVYISGFIIYFYICILTV 120

Query: 117 LNLLTRLVKY 126
           +++L R+V++
Sbjct: 121 MSILRRIVEW 130


  Database: KOG eukaryal database 04/03
    Posted date:  Apr 14, 2003  1:07 PM
  Number of letters in database: 30,389,216
  Number of sequences in database:  60,738
  
Lambda     K      H
   0.326    0.138    0.389 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,934,142
Number of Sequences: 60738
Number of extensions: 332675
Number of successful extensions: 1383
Number of sequences better than 1.0e-05: 2
Number of HSP's better than  0.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 1378
Number of HSP's gapped (non-prelim): 2
length of query: 207
length of database: 30,389,216
effective HSP length: 101
effective length of query: 106
effective length of database: 24,254,678
effective search space: 2570995868
effective search space used: 2570995868
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)