ORF STATUS Function Best COG Functional category Pathways and functional systems
r_klactVI7133 good P KOG4656 Inorganic ion transport and metabolism Copper chaperone for superoxide dismutase
Only best alignment is shown:
BLASTP 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= r_klactVI7133 2484542 2485276 245
(245 letters)
Database: KOG eukaryal database 04/03
60,738 sequences; 30,389,216 total letters
Searching..................................................done
Color Key for Alignment Scores: 
Score E
Sequences producing significant alignments: (bits) Value
YMR038c [P] KOG4656 Copper chaperone for superoxide dismutase 278 5e-75
Hs4826665 [P] KOG4656 Copper chaperone for superoxide dismutase 101 8e-22
At1g12520 [P] KOG4656 Copper chaperone for superoxide dismutase 100 2e-21
SPAC22E12.04 [P] KOG0441 Cu2+/Zn2+ superoxide dismutase SOD1 77 2e-14
7303790 [P] KOG4656 Copper chaperone for superoxide dismutase 77 2e-14
>YMR038c [P] KOG4656 Copper chaperone for superoxide dismutase
Length = 249
Score = 278 bits (711), Expect = 5e-75
Identities = 135/248 (54%), Positives = 185/248 (74%), Gaps = 7/248 (2%)
Query: 4 TDENDFEATYAVEMHCESCTNDIQKCLKDVNGIKNVTFDIKDNLMNVEGHAAPSAIINAL 63
T + +EATYA+ MHCE+C NDI+ CLK+V GI ++ FDI+ +M+VE APS IIN L
Sbjct: 2 TTNDTYEATYAIPMHCENCVNDIKACLKNVPGINSLNFDIEQQIMSVESSVAPSTIINTL 61
Query: 64 KNCGRDGIIRGTGKPNSAAVSILG---QYTTGPFENT-VKGLVRIVEVAQKKTFFDINLN 119
+NCG+D IIRG GKPNS+AV+IL +YT ++T V+GL RIV+V + KT FDI +N
Sbjct: 62 RNCGKDAIIRGAGKPNSSAVAILETFQKYTIDQKKDTAVRGLARIVQVGENKTLFDITVN 121
Query: 120 GVEKPGLYYASVRASGDLSEGVKSTGDPIYKFDQPIDCTSPSDSIPNSFSGSSFVSAPVH 179
GV + G Y+AS+ GD+S+GV+STG +KFD+PI+C + SD N +SG +F+SAP+
Sbjct: 122 GVPEAGNYHASIHEKGDVSKGVESTGKVWHKFDEPIECFNESDLGKNLYSGKTFLSAPLP 181
Query: 180 VWELIGRSFVVT---TDPEHNVNKDNDISFGGVIARSAGIWENDKEVCACSGKTLWQERK 236
W+LIGRSFV++ PE+ + D SF GVIARSAG+WEN+K+VCAC+GKT+W+ERK
Sbjct: 182 TWQLIGRSFVISKSLNHPENEPSSVKDYSFLGVIARSAGVWENNKQVCACTGKTVWEERK 241
Query: 237 DAIQHNIR 244
DA+ +NI+
Sbjct: 242 DALANNIK 249
>Hs4826665 [P] KOG4656 Copper chaperone for superoxide dismutase
Length = 274
Score = 101 bits (252), Expect = 8e-22
Identities = 69/247 (27%), Positives = 124/247 (49%), Gaps = 31/247 (12%)
Query: 13 YAVEMHCESCTNDIQKCLKDVNGIKNVTFDIKDNLMNVEGHAAPSAIINALKNCGRDGII 72
+AV+M C+SC + ++K L+ V G+++V ++D ++ V + L+ GR ++
Sbjct: 16 FAVQMTCQSCVDAVRKSLQGVAGVQDVEVHLEDQMVLVHTTLPSQEVQALLEGTGRQAVL 75
Query: 73 RGTGKPN----SAAVSILGQYTTGPFENTVKGLVRIVEVAQKKTFFDINLNGVEKPGLYY 128
+G G AAV+ILG GP TV+G+VR +++ ++ + ++G+E PGL+
Sbjct: 76 KGMGSGQLQNLGAAVAILG----GP--GTVQGVVRFLQLTPERCLIEGTIDGLE-PGLHG 128
Query: 129 ASVRASGDLSEGVKSTGDPI----YKFDQPIDCTSPSDSIPNSFSGSS------FVSAPV 178
V GDL+ S G+ P D + N + + +
Sbjct: 129 LHVHQYGDLTNNCNSCGNHFNPDGASHGGPQDSDRHRGDLGNVRADADGRAIFRMEDEQL 188
Query: 179 HVWELIGRSFVVTTDPE------HNVNK----DNDISFGGVIARSAGIWENDKEVCACSG 228
VW++IGRS ++ + H ++K + G+IARSAG+++N K++C+C G
Sbjct: 189 KVWDVIGRSLIIDEGEDDLGRGGHPLSKITGNSGERLACGIIARSAGLFQNPKQICSCDG 248
Query: 229 KTLWQER 235
T+W+ER
Sbjct: 249 LTIWEER 255
>At1g12520 [P] KOG4656 Copper chaperone for superoxide dismutase
Length = 320
Score = 100 bits (248), Expect = 2e-21
Identities = 67/226 (29%), Positives = 107/226 (46%), Gaps = 12/226 (5%)
Query: 13 YAVEMHCESCTNDIQKCLKDVNGIKNVTFDIKDNLMNVEGHAAPSAIINALKNCGRDGII 72
+ V+M CE C N ++ L+ + GI+ V D+ + ++ + G + A+ AL+ GR +
Sbjct: 91 FMVDMTCEGCVNAVKNKLETIEGIEKVEVDLSNQVVRILGSSPVKAMTQALEQTGRKARL 150
Query: 73 RGTGKPNSAAVSILGQYTTGPFENTVKGLVRIVEVAQKKTFFDINLNGVEKPGLYYASVR 132
G G P VS GP + G+VR +V+ + + N G+ PG + +
Sbjct: 151 IGQGVPQDFLVSAAVAEFKGP---DIFGVVRFAQVSMELARIEANFTGL-SPGTHSWCIN 206
Query: 133 ASGDLSEGVKSTGDPIYKFDQPIDCTSPSD--SIPNSFSGSSFVSA---PVHVWELIGRS 187
GDL+ G STG F D ++ +G +F S + V +LIGR+
Sbjct: 207 EYGDLTNGAASTGSLYNPFQDQTGTEPLGDLGTLEADKNGEAFYSGKKEKLKVADLIGRA 266
Query: 188 FVVTTDPEHNVNKDNDISFGGVIARSAGIWENDKEVCACSGKTLWQ 233
VV + NK VIARSAG+ EN K++C+C G +W+
Sbjct: 267 VVVYKTDD---NKSGPGLTAAVIARSAGVGENYKKLCSCDGTVIWE 309
>SPAC22E12.04 [P] KOG0441 Cu2+/Zn2+ superoxide dismutase SOD1
Length = 297
Score = 77.4 bits (189), Expect = 2e-14
Identities = 65/231 (28%), Positives = 111/231 (47%), Gaps = 19/231 (8%)
Query: 9 FEATYAVEMHCESCTNDIQKCLKDVNGIKNVTFDIKDNLMNVEGHAAPSAIINALKNC-G 67
FE Y ++ + N +++ +D+N I++ +D + V+G +PS ++ L+N
Sbjct: 2 FEVEYLIKDCDDVNKNTLEQEFQDLN-IEDWKWDAATGQLIVKGSVSPSKVLRRLENATS 60
Query: 68 RDGIIRGTGKPNSAAVSILGQYTTGPFE-NTVKGLVRIVEVAQKKTFFDINLNGVEKPGL 126
+ +IRG S VSIL + + V GL R + ++K F D+ +
Sbjct: 61 KPILIRGASNKESG-VSILYEANEDITQIPKVYGLCRFIPT-EEKIFLDLIATQLLPNRE 118
Query: 127 YYASVRASGDLSEGVKSTGDPIYKFDQPIDCTSPSDSIPNSFSGSSFVSAPVHVWELIGR 186
Y V SGD+S G+KS GD + + + + + VS + W IG
Sbjct: 119 YTGLVTISGDISRGLKSAGDSL------VTLFNANSNEQGKIVLDKEVSGSLPNW--IGH 170
Query: 187 SFVVTTDPEHNVNKDNDISFGGVIARSAGIWENDKEVCACSGKTLWQERKD 237
FV+ D+D + G+I+RSAG+ +N K++CAC+GK+LW E +
Sbjct: 171 CFVL------KCVDDSDSATMGIISRSAGLGQNTKQICACTGKSLWTEHAE 215
>7303790 [P] KOG4656 Copper chaperone for superoxide dismutase
Length = 264
Score = 77.0 bits (188), Expect = 2e-14
Identities = 62/230 (26%), Positives = 102/230 (43%), Gaps = 32/230 (13%)
Query: 33 VNGIKNVTFDIKDNLMNVEGHAAPSAIINALKNCGRDGIIRGTGKPNSAAVSILGQYTTG 92
++G+ V D ++ + ++ S I + ++ G ++ G G +AV+++ +
Sbjct: 27 LDGVGQVEIDTQEGRVIIQTQRPWSEIQDKIEATGVRAVLSGFG--GQSAVALINTTGSV 84
Query: 93 PFENTVKGLVRIVEVAQKK---TFFDINLNGVEKPGLYYASVRASGDLSEGVKSTGDPIY 149
+ ++G+VR + K D ++G+ PGL+ + SGD S G S G+
Sbjct: 85 VDKTPIQGVVRFTTITADKKPGVVVDGVVDGLS-PGLHGLHIHESGDTSAGCSSVGEHYN 143
Query: 150 KFDQPIDCTSPSDSIPNSFSGS--------------SFVSAPVHVWELIGRSFVVTTDPE 195
P SP+ +G FV + VW++IGR+ V+T + +
Sbjct: 144 PRQSPHG--SPAAGAEERHAGDLGNIRADENGRATFRFVDPVLEVWDIIGRAVVLTANAD 201
Query: 196 HNVNKDNDISF----------GGVIARSAGIWENDKEVCACSGKTLWQER 235
ND S G+IARSAGI EN K +CAC G TLW ER
Sbjct: 202 DLGRGGNDQSLIDGNSGERIACGIIARSAGILENFKRICACDGVTLWDER 251
Database: KOG eukaryal database 04/03
Posted date: Apr 14, 2003 1:07 PM
Number of letters in database: 30,389,216
Number of sequences in database: 60,738
Lambda K H
0.315 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 16,094,939
Number of Sequences: 60738
Number of extensions: 712346
Number of successful extensions: 1569
Number of sequences better than 1.0e-05: 5
Number of HSP's better than 0.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 1555
Number of HSP's gapped (non-prelim): 6
length of query: 245
length of database: 30,389,216
effective HSP length: 104
effective length of query: 141
effective length of database: 24,072,464
effective search space: 3394217424
effective search space used: 3394217424
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)