ORF STATUS Function Best COG Functional category Pathways and functional systems
r_klactVI7298 good E KOG2831 Amino acid transport and metabolism ATP phosphoribosyltransferase
Only best alignment is shown:
BLASTP 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= r_klactVI7298 2544518 2545408 297
(297 letters)
Database: KOG eukaryal database 04/03
60,738 sequences; 30,389,216 total letters
Searching..................................................done
Color Key for Alignment Scores: 
Score E
Sequences producing significant alignments: (bits) Value
YER055c [E] KOG2831 ATP phosphoribosyltransferase 471 e-133
SPAC25G10.05c [E] KOG2831 ATP phosphoribosyltransferase 333 2e-91
At1g58080 [E] KOG2831 ATP phosphoribosyltransferase 69 6e-12
>YER055c [E] KOG2831 ATP phosphoribosyltransferase
Length = 297
Score = 471 bits (1211), Expect = e-133
Identities = 236/297 (79%), Positives = 262/297 (87%)
Query: 1 MDLVNHLNDKLLFAIPKKGRLYEKSVSILKGSDIKFHRSARLDIAISTNMPVALIFLPAA 60
MDLVNHL D+LLFAIPKKGRLY KSVSIL G+DI FHRS RLDIA+ST++PVAL+FLPAA
Sbjct: 1 MDLVNHLTDRLLFAIPKKGRLYSKSVSILNGADITFHRSQRLDIALSTSLPVALVFLPAA 60
Query: 61 DIPMFVGEGRCDLGITGVDQVRESEVDVNLPIDLQFGTCKLQVQVPVAGEYTSPEQLIGK 120
DIP FVGEG+CDLGITGVDQVRES VDV+L IDLQFG CKLQVQVPV GEY PEQLIGK
Sbjct: 61 DIPTFVGEGKCDLGITGVDQVRESNVDVDLAIDLQFGNCKLQVQVPVNGEYKKPEQLIGK 120
Query: 121 TIVSSFVNLTKKYFAQLEGVPESEMVTRVKYVGGSVEASCALGVADAIVDLVESGETMRA 180
TIV+SFV L +KYFA LEG +M TR+K+V GSVEASCALG+ DAIVDLVESGETMRA
Sbjct: 121 TIVTSFVKLAEKYFADLEGTTVEKMTTRIKFVSGSVEASCALGIGDAIVDLVESGETMRA 180
Query: 181 AGLTAIATVLDTSAHLIESKNPKGDVELLRTIKSRIEGVMTAQKYVSCSYNAPENKLPEL 240
AGL IATVL TSA+LIESKNPK D L+ TIKSRIEGVMTAQ++VSC YNAPE+KLPEL
Sbjct: 181 AGLVDIATVLSTSAYLIESKNPKSDKSLIATIKSRIEGVMTAQRFVSCIYNAPEDKLPEL 240
Query: 241 LKITPGRRAPTISQINDSGWVAVSSMIERKNKGDIMDDLKKNGAEDIMVFEISNCRV 297
LK+TPGRRAPTIS+I+D GWVAVSSMIERK KG ++D+LK+ GA DIMVFEISNCRV
Sbjct: 241 LKVTPGRRAPTISKIDDEGWVAVSSMIERKTKGVVLDELKRLGASDIMVFEISNCRV 297
>SPAC25G10.05c [E] KOG2831 ATP phosphoribosyltransferase
Length = 310
Score = 333 bits (854), Expect = 2e-91
Identities = 175/309 (56%), Positives = 225/309 (72%), Gaps = 13/309 (4%)
Query: 1 MDLVNHLNDKLLFAIPKKGRLYEKSVSILKGSDIKFHRSARLDIAISTNMPVALIFLPAA 60
MDLVNHL D+LLFA+PKKGRLYE V++LKGSDIKF R+ RLDIA+ N+P+AL+FLPAA
Sbjct: 1 MDLVNHLEDRLLFAVPKKGRLYESCVNVLKGSDIKFRRNPRLDIALVQNLPIALVFLPAA 60
Query: 61 DIPMFVGEGRCDLGITGVDQVRES------EVDVNLPIDLQFGTCKLQVQVPVAGEYTSP 114
DIP FVG GR LGITG DQ+ E+ ++ + +DLQFG CKLQVQVP +G+ TS
Sbjct: 61 DIPRFVGTGRVHLGITGQDQIAEARLRIGDKLKIEELVDLQFGGCKLQVQVPESGDITSV 120
Query: 115 EQLIGKTIVSSFVNLTKKYF------AQLEGVPESEMVTRVKYVGGSVEASCALGVADAI 168
+QL+G+ IV+SF L +YF A+ EG +S + T + +V GSVEASCALG+ADA+
Sbjct: 121 DQLVGRRIVTSFEYLVAEYFDKVEKKAKSEGKVDSGIKTEISFVSGSVEASCALGIADAV 180
Query: 169 VDLVESGETMRAAGLTAIATVLDTSAHLIESKNPKGDVE-LLRTIKSRIEGVMTAQKYVS 227
VDLVESGETMRA+GL I TV+ TSA L+ S N ++E LL+TI +RI G + AQ+YV
Sbjct: 181 VDLVESGETMRASGLKPIETVMSTSAVLVRSSNCSSELEPLLQTIITRIRGYIIAQQYVL 240
Query: 228 CSYNAPENKLPELLKITPGRRAPTISQINDSGWVAVSSMIERKNKGDIMDDLKKNGAEDI 287
+YN LP +LKITPG+RAPTI+ +++ GWVAVSSM+ +K +MD L +N A DI
Sbjct: 241 VNYNVNREHLPVVLKITPGKRAPTITTLDEPGWVAVSSMVVKKEVAQVMDKLSQNHAHDI 300
Query: 288 MVFEISNCR 296
+V I N R
Sbjct: 301 LVLSIDNSR 309
>At1g58080 [E] KOG2831 ATP phosphoribosyltransferase
Length = 411
Score = 69.3 bits (168), Expect = 6e-12
Identities = 78/318 (24%), Positives = 137/318 (42%), Gaps = 42/318 (13%)
Query: 9 DKLLFAIPKKGRLYEKSVSILKGSDIKFHR-SARLDIAISTNMPVALI-FLPAADIPMFV 66
D++ +P KGR+ ++ +LK + + + R +A +P + F DI +
Sbjct: 76 DQIRLGLPSKGRMAADAIDLLKDCQLFVKQVNPRQYVAQIPQLPNTEVWFQRPKDIVRKL 135
Query: 67 GEGRCDLGITGVDQV----RESEVDVNLPIDLQFGTCKLQVQVPVAGEYTSPEQLIGKT- 121
G DLGI G+D + +E+E + + L FG C L + +P G + + L
Sbjct: 136 LSGDLDLGIVGLDTLSEYGQENEDLIIVHEALNFGDCHLSIAIPNYGIFENINSLKELAQ 195
Query: 122 -----------IVSSFVNLTKKYFAQLEGVPESEMVTRVKYVGGSVEASCALGVADAIVD 170
+ + F L K+ + G+ T G++EA+ A+G+ADAI+D
Sbjct: 196 MPQWSEERPLRLATGFTYLGPKFMKE-NGIKHVVFST----ADGALEAAPAMGIADAILD 250
Query: 171 LVESGETMRAAGLTAI--ATVLDTSAHLIESKNP----KGDVELLRTIKSRIEGVMTAQK 224
LV SG T++ L I VL++ A L+ S+ KG + + I R+E + A
Sbjct: 251 LVSSGITLKENNLKEIEGGVVLESQAALVASRRALNERKGALNTVHEILERLEAHLKADG 310
Query: 225 YVSCSYNAPENKLPELLK------ITPGRRAPTISQI--NDSG-----WVAVSSMIERKN 271
+ N N E+ + G + PTIS + +G + A+ + +K
Sbjct: 311 QFTVVANMRGNSAQEVAERVLSQPSLSGLQGPTISPVYCTQNGKVSVDYYAIVICVPKKA 370
Query: 272 KGDIMDDLKKNGAEDIMV 289
D + L+ G ++V
Sbjct: 371 LYDSVKQLRAAGGSGVLV 388
Database: KOG eukaryal database 04/03
Posted date: Apr 14, 2003 1:07 PM
Number of letters in database: 30,389,216
Number of sequences in database: 60,738
Lambda K H
0.317 0.135 0.376
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 16,630,963
Number of Sequences: 60738
Number of extensions: 670709
Number of successful extensions: 1578
Number of sequences better than 1.0e-05: 3
Number of HSP's better than 0.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 1570
Number of HSP's gapped (non-prelim): 3
length of query: 297
length of database: 30,389,216
effective HSP length: 106
effective length of query: 191
effective length of database: 23,950,988
effective search space: 4574638708
effective search space used: 4574638708
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)