ORF STATUS Function Best COG Functional category Pathways and functional systems
r_klactVI7351 good B KOG1633 Chromatin structure and dynamics F-box protein JEMMA and related proteins with JmjC, PHD, F-box and LRR domains
Only best alignment is shown:
BLASTP 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= r_klactVI7351 2562649 2561216 -478
(478 letters)
Database: KOG eukaryal database 04/03
60,738 sequences; 30,389,216 total letters
Searching..................................................done
Color Key for Alignment Scores: 
Score E
Sequences producing significant alignments: (bits) Value
YER051w [B] KOG1633 F-box protein JEMMA and related proteins wit... 442 e-124
7299136_1 [B] KOG1633 F-box protein JEMMA and related proteins w... 202 1e-51
Hs16306580_1 [B] KOG1633 F-box protein JEMMA and related protein... 193 5e-49
SPCC622.16c [B] KOG1633 F-box protein JEMMA and related proteins... 162 1e-39
Hs22055516 [B] KOG1633 F-box protein JEMMA and related proteins ... 161 2e-39
Hs22047606 [B] KOG1633 F-box protein JEMMA and related proteins ... 141 2e-33
CE27145 [B] KOG1633 F-box protein JEMMA and related proteins wit... 136 6e-32
CE09781 [B] KOG1633 F-box protein JEMMA and related proteins wit... 136 6e-32
Hs4885547 [B] KOG1633 F-box protein JEMMA and related proteins w... 130 4e-30
Hs22047187 [B] KOG1633 F-box protein JEMMA and related proteins ... 129 1e-29
CE20788 [B] KOG1633 F-box protein JEMMA and related proteins wit... 128 2e-29
CE29355 [B] KOG1633 F-box protein JEMMA and related proteins wit... 125 1e-28
CE29354 [B] KOG1633 F-box protein JEMMA and related proteins wit... 125 1e-28
Hs20548284 [B] KOG1633 F-box protein JEMMA and related proteins ... 50 1e-05
>YER051w [B] KOG1633 F-box protein JEMMA and related proteins with JmjC PHD
F-box and LRR domains
Length = 492
Score = 442 bits (1137), Expect = e-124
Identities = 237/496 (47%), Positives = 315/496 (62%), Gaps = 42/496 (8%)
Query: 8 CHFCKKDDSEDKGQPIWVGCEFCDGWCHLTCVPIQFVVPKLENPSQLLAFKE--KHVESF 65
C C+ D+ G IWV C+ C W H+ CVP++ + S++L++ K ++S+
Sbjct: 7 CQHCQLKDNP--GALIWVKCDSCPQWVHVKCVPLKRIHYSNLTSSEVLSYPNSAKQIKSY 64
Query: 66 KCTLHDESKC----ALLKLNGV----SVGTEDIAFTKRNRLRNKRPIDYIALNEGNDKRL 117
+C H E + AL+ G ED KR R K+ +DYIALNEG KR
Sbjct: 65 RCPNHKEGEYLTAYALITQKGKRQRNKENPEDSHINKRYNFRKKKLLDYIALNEGESKRD 124
Query: 118 KHEHPHTQAFLACFEKWKD-PKAISSSELESDFQIIKVPLRVSDPADSGMYVISANELGL 176
K HPH ++F+ FEKWK+ I++++ F I VP ++ DP +SG+YV +
Sbjct: 125 KMNHPHKESFMKSFEKWKNGSNIINAADFAEKFDNIDVPYKIIDPLNSGVYVPNVGT--- 181
Query: 177 VDSKDHVKLNVEYLTKIMGDDYPLDVMDVQTQMNEKWTLSQWNEYYSHTSPSDRDRIRNV 236
D+ L V Y+T+++G+DY +DVMDVQ+QMNE W L WNEY+++T P RDRIRNV
Sbjct: 182 ----DNGCLTVNYITEMIGEDYHVDVMDVQSQMNENWNLGSWNEYFTNTEPDRRDRIRNV 237
Query: 237 ISLEVSHVESFKDGIRRPNAVNNNDLVDIVWNFG---------RTETDIERPKVTKYILM 287
ISLEVS++E + + RP AV NDLVD +W+F + E + +PKVTKYILM
Sbjct: 238 ISLEVSNIEGLE--LERPTAVRQNDLVDKIWSFNGHLEKVNGEKAEENDPKPKVTKYILM 295
Query: 288 SVGNAYTDFHLDFAGTSVYYNVISGSKKFILFPPTDYNLKKYREWCDNDNQNDIFLGDQL 347
SV +AYTDFHLDFAGTSVYYNVISG KKF+LFPPT N+ KY EW ++QN +FLGD L
Sbjct: 296 SVKDAYTDFHLDFAGTSVYYNVISGQKKFLLFPPTQSNIDKYIEWSLKEDQNSVFLGDIL 355
Query: 348 EAGIAMELTEGNLFMIPCGYIHAVYTPEDSFIVGGNFLTLRDITTQLNVVEIEHQTKVPK 407
E GIAMEL G+LFMIP GYIHAVYTP DS + GGNFLT+RD+ T L +VEIE TKVP+
Sbjct: 356 EDGIAMELDAGDLFMIPAGYIHAVYTPVDSLVFGGNFLTIRDLETHLKIVEIEKLTKVPR 415
Query: 408 KFTFPQFESVMGKTCEWL-LNSDHIQSISSED----------IENLVKYLSSSNIKYKPI 456
+FTFP+F+ VMGK CE+L L+ + I S S+ I++L Y+ +KYKP+
Sbjct: 416 RFTFPKFDQVMGKLCEYLALDKNKITSDVSDGDLLSRTTNCAIQSLHAYVIKPEVKYKPL 475
Query: 457 NYQSKKELITELKNKI 472
N+ SKK L L + I
Sbjct: 476 NFTSKKHLAKALADLI 491
>7299136_1 [B] KOG1633 F-box protein JEMMA and related proteins with JmjC PHD
F-box and LRR domains
Length = 1087
Score = 202 bits (513), Expect = 1e-51
Identities = 124/296 (41%), Positives = 160/296 (53%), Gaps = 28/296 (9%)
Query: 154 VPLRVSDPADSGMYVISANELGLVDSKDHVKLNVEYLTKIMGDDYPLDVMDVQTQMNEKW 213
+PL D A G+ + E + D V+L V G LDVMDV TQ N +
Sbjct: 107 IPLLFRDKAGLGLRMPDPQEFTVND----VRLCV-------GSRRLLDVMDVNTQKNLQM 155
Query: 214 TLSQWNEYYSHTSPSDRDRIRNVISLEVSHVESFKDGIRRPNAVNNNDLVDIVWNFGRTE 273
T+ +W +YY SP +DR+ NVISLE SH + ++ P V D VD+VW +
Sbjct: 156 TMKEWQQYYD--SPQ-KDRLLNVISLEFSHTRLDRF-VQSPEIVRQIDWVDVVWPKQLKD 211
Query: 274 TDIER---------PKVTKYILMSVGNAYTDFHLDFAGTSVYYNVISGSKKFILFPPTDY 324
E PKV KY LMSV N YTDFH+DF GTSV+Y+++ GSK F L PPTD
Sbjct: 212 AQREGTNLLGGMMYPKVQKYCLMSVKNCYTDFHIDFGGTSVWYHILRGSKVFWLIPPTDR 271
Query: 325 NLKKYREWCDNDNQNDIFLGDQLEAGIAMELTEGNLFMIPCGYIHAVYTPEDSFIVGGNF 384
NL+ Y +W + Q DIF GD +E + LT GN F IP G+IHAVYTP S + GGNF
Sbjct: 272 NLQLYEKWVLSGKQADIFFGDTVEKCARVYLTAGNTFFIPTGWIHAVYTPTQSLVFGGNF 331
Query: 385 LTLRDITTQLNVVEIEHQTKVPKKFTFPQFES----VMGKTCEWLLNSDHIQSISS 436
L I QL +E TKVP+KF +P F V+ + LL H++ +S
Sbjct: 332 LHSFGIVKQLKTASVEDSTKVPQKFRYPFFTEMLWYVLARYVHTLLGHSHLEGEAS 387
>Hs16306580_1 [B] KOG1633 F-box protein JEMMA and related proteins with JmjC PHD
F-box and LRR domains
Length = 675
Score = 193 bits (490), Expect = 5e-49
Identities = 125/338 (36%), Positives = 182/338 (52%), Gaps = 29/338 (8%)
Query: 88 EDIAFTKRNR--LRNKRPIDYIALNEGNDKRL--KHEHPHTQAFLACFEKWKDPKAISSS 143
E I +++R R +R + D I+ +E KR E HT + A F + + K +
Sbjct: 6 ERIRYSQRLRGTMRRRYEDDGISDDEIEGKRTFDLEEKLHTNKYNANFVTFMEGKDFNVE 65
Query: 144 ELESDFQIIKVPLRVSDPADSGMYVISANELGLVDSKDHVKLNVEYLTKIMGDDYPLDVM 203
++ + DP +I N GL V + +G +DVM
Sbjct: 66 YIQRG--------GLRDP------LIFKNSDGLGIKMPDPDFTVNDVKMCVGSRRMVDVM 111
Query: 204 DVQTQMNEKWTLSQWNEYYSHTSPSDRDRIRNVISLEVSHVESFKDGIRRPNAVNNNDLV 263
DV TQ + T++QW YY T +R+++ NVISLE SH ++ ++RP+ V+ D V
Sbjct: 112 DVNTQKGIEMTMAQWTRYYE-TPEEEREKLYNVISLEFSHTR-LENMVQRPSTVDFIDWV 169
Query: 264 DIVW----NFGRTET-----DIERPKVTKYILMSVGNAYTDFHLDFAGTSVYYNVISGSK 314
D +W +TE+ +++ PKV KY LMSV YTDFH+DF GTSV+Y++ G K
Sbjct: 170 DNMWPRHLKESQTESTNAILEMQYPKVQKYCLMSVRGCYTDFHVDFGGTSVWYHIHQGGK 229
Query: 315 KFILFPPTDYNLKKYREWCDNDNQNDIFLGDQLEAGIAMELTEGNLFMIPCGYIHAVYTP 374
F L PPT +NL+ Y W + Q DIFLGD++ +EL +G F+IP G+IHAVYTP
Sbjct: 230 VFWLIPPTAHNLELYENWLLSGKQGDIFLGDRVSDCQRIELKQGYTFVIPSGWIHAVYTP 289
Query: 375 EDSFIVGGNFLTLRDITTQLNVVEIEHQTKVPKKFTFP 412
D+ + GGNFL +I QL + IE +T+VP KF +P
Sbjct: 290 TDTLVFGGNFLHSFNIPMQLKIYNIEDRTRVPNKFRYP 327
>SPCC622.16c [B] KOG1633 F-box protein JEMMA and related proteins with JmjC PHD
F-box and LRR domains
Length = 948
Score = 162 bits (410), Expect = 1e-39
Identities = 93/247 (37%), Positives = 142/247 (56%), Gaps = 6/247 (2%)
Query: 178 DSKDHVKLNVEYLTKIMGDDYPLDVMDV--QTQMNEKWTLSQWNEYYSHTSPSDRDRIRN 235
D+++ +LN+ + ++G D PL ++DV Q Q+ K + W +Y S PS R RI +
Sbjct: 179 DTQNTRQLNLSKIATLIGYDCPLALVDVVTQKQIPNKMDMESWVKYMS-LEPSKRGRIYD 237
Query: 236 VISLEVSHVESFKDGIRRPNAVNNNDLVDIVWNFGRTETDIERPKVTKYILMSVGNAYTD 295
V+SLEVS + +R+PN V + DLV+ VW G E P V Y LMS N+YT+
Sbjct: 238 VLSLEVSTTK-LAYYVRKPNIVRDLDLVNTVWPPGSFALG-EYPHVDTYCLMSAENSYTE 295
Query: 296 FHLDFAGTSVYYNVISGSKKFILFPPTDYNLKKYREWCDNDNQND-IFLGDQLEAGIAME 354
FH++F G+S YYN++ G K F L P T N + Y W + N +D FL + ++ +E
Sbjct: 296 FHIEFGGSSAYYNILDGCKIFYLIPGTSKNWEAYTAWLTSSNDSDKKFLPNMVDVCYCVE 355
Query: 355 LTEGNLFMIPCGYIHAVYTPEDSFIVGGNFLTLRDITTQLNVVEIEHQTKVPKKFTFPQF 414
+ ++P G+I+AV TP D+ + GNFLT I QL++ +E Q + K++ +P F
Sbjct: 356 VHSQQTILVPSGWIYAVVTPCDTISIAGNFLTFLHIYPQLSIYNLELQLGIEKEYQYPYF 415
Query: 415 ESVMGKT 421
ES+M T
Sbjct: 416 ESIMWYT 422
>Hs22055516 [B] KOG1633 F-box protein JEMMA and related proteins with JmjC PHD
F-box and LRR domains
Length = 1060
Score = 161 bits (407), Expect = 2e-39
Identities = 90/224 (40%), Positives = 123/224 (54%), Gaps = 7/224 (3%)
Query: 194 MGDDYPLDVMDVQTQMNEKWTLSQWNEYYSHTSPSDRDRIRNVISLEVSHVESFKDGIRR 253
+G D +DV+DV Q + K L + +YY R+++ NVISLE S + +
Sbjct: 187 VGSDKEIDVIDVTRQADCKMKLGDFVKYYYS---GKREKVLNVISLEFSDTR-LSNLVET 242
Query: 254 PNAVNNNDLVDIVWNFGRTETDIERPKVTKYILMSVGNAYTDFHLDFAGTSVYYNVISGS 313
P V V+ +W E ERP V KY LMSV ++YTDFH+DF GTSV+Y+V+ G
Sbjct: 243 PKIVRKLSWVENLWP---EECVFERPNVQKYCLMSVRDSYTDFHIDFGGTSVWYHVLKGE 299
Query: 314 KKFILFPPTDYNLKKYREWCDNDNQNDIFLGDQLEAGIAMELTEGNLFMIPCGYIHAVYT 373
K F L PT+ NL + W + NQN++F GDQ++ + +G IP G+IHAV T
Sbjct: 300 KIFYLIRPTNANLTLFECWSSSSNQNEMFFGDQVDKCYKCSVKQGQTLFIPTGWIHAVLT 359
Query: 374 PEDSFIVGGNFLTLRDITTQLNVVEIEHQTKVPKKFTFPQFESV 417
P D GGNFL +I QL EIE + F FP FE++
Sbjct: 360 PVDCLAFGGNFLHSLNIEMQLKAYEIEKRLSTADLFRFPNFETI 403
>Hs22047606 [B] KOG1633 F-box protein JEMMA and related proteins with JmjC PHD
F-box and LRR domains
Length = 727
Score = 141 bits (355), Expect = 2e-33
Identities = 79/239 (33%), Positives = 127/239 (53%), Gaps = 6/239 (2%)
Query: 229 DRDRIRNVISLEVSHVESFKDGIRRPNAVNNNDLVDIVWNFGRTETDIERPKVTKYILMS 288
+R ++ NVISLE S + + + P+ V+ W ++ +P V KY LM
Sbjct: 4 NRPKVLNVISLEFSDTK-MSELVEVPDIAKKLSWVENYWP---DDSVFPKPFVQKYCLMG 59
Query: 289 VGNAYTDFHLDFAGTSVYYNVISGSKKFILFPPTDYNLKKYREWCDNDNQNDIFLGDQLE 348
V ++YTDFH+DF GTSV+Y+V+ G K F L PTD NL +Y W + Q+++F GD+++
Sbjct: 60 VQDSYTDFHIDFGGTSVWYHVLWGEKIFYLIKPTDENLARYESWSSSVTQSEVFFGDKVD 119
Query: 349 AGIAMELTEGNLFMIPCGYIHAVYTPEDSFIVGGNFLTLRDITTQLNVVEIEHQTKVPKK 408
+ +G+ +P G+IHAV T +D GGNFL +I QL E+E + K P
Sbjct: 120 KCYKCVVKQGHTLFVPTGWIHAVLTSQDCMAFGGNFLHNLNIGMQLRCYEMEKRLKTPDL 179
Query: 409 FTFPQFESVMGKTCEWLLNSDHIQSISSEDIENLVKYLSSSNIKYKPINYQSKKELITE 467
F FP FE++ + LL + ++ + + + + + + KKEL++E
Sbjct: 180 FKFPFFEAICWFVAKNLLET--LKELREDGFQPQTYLVQGVKALHTALKLWMKKELVSE 236
>CE27145 [B] KOG1633 F-box protein JEMMA and related proteins with JmjC PHD
F-box and LRR domains
Length = 897
Score = 136 bits (343), Expect = 6e-32
Identities = 116/429 (27%), Positives = 185/429 (43%), Gaps = 61/429 (14%)
Query: 7 KCHFCKKDDSEDKGQPIWVGCEFCDGWCHLTCVPIQFVVPKLENPSQLLAFKEKHVESFK 66
K H KK+D + W+GC+ C W H C S L F+ E F
Sbjct: 230 KSHHHKKNDFQ------WIGCDSCQTWYHFLC-------------SGLEQFEYYLYEKFF 270
Query: 67 CTLHDESKCALLKLNGVSVGTEDIAFTKRNRLRNKRPIDYIALNEGNDKRLKHE---HPH 123
C KC + G S+ + +A +R R P N+K L E
Sbjct: 271 CP-----KC--VPHTGHSIRYKVVA---PHRYRWYSP---------NEKHLGIEVGSKTW 311
Query: 124 TQAFLACFEKWKDPKAISSSELESDFQIIKVPLRVSDPADSGMYVISANELGLVDSKDHV 183
+ F+ P +E ++ + ++ + G + + GL +
Sbjct: 312 IEDFITRENTVPSPTDDEVCIVEDGYEFRREFEKLGGADNWGKVFMVKDMDGLNMTMPKP 371
Query: 184 KLNVEYLTKIMGDDYPLDVMDVQTQMNEKWTLSQWNEYYSHTSPSDRDRIRNVISLEVSH 243
++E + KIMG DY +D +DV Q L + + + T +R + N +SLE S
Sbjct: 372 GFDLEDVVKIMGSDYEVDTIDVYNQSTYSMKLDTFRKLFRDTK--NRPLLYNFLSLEFSD 429
Query: 244 VESFKDGIRRPNAVNNNDLVDIVWN----------FGRTE--TDIERPKVTKYILMSVGN 291
K+ + P V +V+ +W R E + +RPKV ++ L +
Sbjct: 430 NNEMKEIAKPPRFVQEISMVNRLWPDVSGAEYIKLLQREEYLPEDQRPKVEQFCLAGMAG 489
Query: 292 AYTDFHLDFAGTSVYYNVISGSKKFILFPPTDYNLKKYREWCDNDNQNDIFLGDQLEAGI 351
+YTDFH+DF G+SVYY+++ G K F + PT+ N Y+ + + GD +
Sbjct: 490 SYTDFHVDFGGSSVYYHILKGEKIFYIAAPTEQNFAAYQAH-ETSPDTTTWFGDIANGAV 548
Query: 352 -AMELTEGNLFMIPCGYIHAVYTPEDSFIVGGNFLTLRDITTQLNVVEIEH----QTKVP 406
+ + EG +IP G+IHAV TP DS + GGNFL L ++ Q+ V +E+ + +
Sbjct: 549 KRVVIKEGQTLLIPAGWIHAVLTPVDSLVFGGNFLHLGNLEMQMRVYHLENAIRKEIRSE 608
Query: 407 KKFTFPQFE 415
+KF FP FE
Sbjct: 609 EKFYFPNFE 617
>CE09781 [B] KOG1633 F-box protein JEMMA and related proteins with JmjC PHD
F-box and LRR domains
Length = 910
Score = 136 bits (343), Expect = 6e-32
Identities = 116/429 (27%), Positives = 185/429 (43%), Gaps = 61/429 (14%)
Query: 7 KCHFCKKDDSEDKGQPIWVGCEFCDGWCHLTCVPIQFVVPKLENPSQLLAFKEKHVESFK 66
K H KK+D + W+GC+ C W H C S L F+ E F
Sbjct: 243 KSHHHKKNDFQ------WIGCDSCQTWYHFLC-------------SGLEQFEYYLYEKFF 283
Query: 67 CTLHDESKCALLKLNGVSVGTEDIAFTKRNRLRNKRPIDYIALNEGNDKRLKHE---HPH 123
C KC + G S+ + +A +R R P N+K L E
Sbjct: 284 CP-----KC--VPHTGHSIRYKVVA---PHRYRWYSP---------NEKHLGIEVGSKTW 324
Query: 124 TQAFLACFEKWKDPKAISSSELESDFQIIKVPLRVSDPADSGMYVISANELGLVDSKDHV 183
+ F+ P +E ++ + ++ + G + + GL +
Sbjct: 325 IEDFITRENTVPSPTDDEVCIVEDGYEFRREFEKLGGADNWGKVFMVKDMDGLNMTMPKP 384
Query: 184 KLNVEYLTKIMGDDYPLDVMDVQTQMNEKWTLSQWNEYYSHTSPSDRDRIRNVISLEVSH 243
++E + KIMG DY +D +DV Q L + + + T +R + N +SLE S
Sbjct: 385 GFDLEDVVKIMGSDYEVDTIDVYNQSTYSMKLDTFRKLFRDTK--NRPLLYNFLSLEFSD 442
Query: 244 VESFKDGIRRPNAVNNNDLVDIVWN----------FGRTE--TDIERPKVTKYILMSVGN 291
K+ + P V +V+ +W R E + +RPKV ++ L +
Sbjct: 443 NNEMKEIAKPPRFVQEISMVNRLWPDVSGAEYIKLLQREEYLPEDQRPKVEQFCLAGMAG 502
Query: 292 AYTDFHLDFAGTSVYYNVISGSKKFILFPPTDYNLKKYREWCDNDNQNDIFLGDQLEAGI 351
+YTDFH+DF G+SVYY+++ G K F + PT+ N Y+ + + GD +
Sbjct: 503 SYTDFHVDFGGSSVYYHILKGEKIFYIAAPTEQNFAAYQAH-ETSPDTTTWFGDIANGAV 561
Query: 352 -AMELTEGNLFMIPCGYIHAVYTPEDSFIVGGNFLTLRDITTQLNVVEIEH----QTKVP 406
+ + EG +IP G+IHAV TP DS + GGNFL L ++ Q+ V +E+ + +
Sbjct: 562 KRVVIKEGQTLLIPAGWIHAVLTPVDSLVFGGNFLHLGNLEMQMRVYHLENAIRKEIRSE 621
Query: 407 KKFTFPQFE 415
+KF FP FE
Sbjct: 622 EKFYFPNFE 630
>Hs4885547 [B] KOG1633 F-box protein JEMMA and related proteins with JmjC PHD
F-box and LRR domains
Length = 1099
Score = 130 bits (327), Expect = 4e-30
Identities = 82/255 (32%), Positives = 126/255 (49%), Gaps = 17/255 (6%)
Query: 176 LVDSKDHVKLNVE----YLTKI---MGDDYPLDVMDVQTQMNEKWTLSQWNEYYSHTSPS 228
LV KD + L V Y++ + +G + +DV DV Q + K L ++ +YY T+
Sbjct: 128 LVPKKDGLGLAVPAPTFYVSDVENYVGPERSVDVTDVTKQKDCKMKLKEFVDYYYSTN-- 185
Query: 229 DRDRIRNVISLEVSHVESFKDGIRRPNAVNNNDLVDIVWNFGRTETDIERPKVTKYILMS 288
R R+ NV +LE S + P+ V V+ W + + +PKVTKY L+
Sbjct: 186 -RKRVLNVTNLEFSDTR-MSSFVEPPDIVKKLSWVENYWP---DDALLAKPKVTKYCLIC 240
Query: 289 VGNAYTDFHLDFAGTSVYYNVISGSKKFILFPPTDYNLKKYREWCDNDNQNDIFLGDQLE 348
V ++YTDFH+D G S +Y+V+ G K F L P N+ Y W N +++F DQ++
Sbjct: 241 VKDSYTDFHIDSGGASAWYHVLKGEKTFYLIRPASANISLYERWRSASNHSEMFFADQVD 300
Query: 349 AGIAMELTEGNLFMIPCGYIHAVYTPEDSFIVGGNFLTLRDITTQLNVVEIEHQTKVPKK 408
+ +G IP G+I+A TP D G+FL + Q+ E+E + K+
Sbjct: 301 KCYKCIVKQGQTLFIPSGWIYATLTPVDCLAFAGHFLHSLSVEMQMRAYEVERRLKLGSL 360
Query: 409 FTFPQFESV---MGK 420
FP FE+ MGK
Sbjct: 361 TQFPNFETACWYMGK 375
>Hs22047187 [B] KOG1633 F-box protein JEMMA and related proteins with JmjC PHD
F-box and LRR domains
Length = 1014
Score = 129 bits (324), Expect = 1e-29
Identities = 75/229 (32%), Positives = 114/229 (49%), Gaps = 10/229 (4%)
Query: 195 GDDYPLDVMDVQTQMNEKWTLSQWNEYYSHTSPSDRDRIRNVISLEVSHVESFKDGIRRP 254
G + +DV DV Q + K L ++ +YY T+ R R+ NV +LE S + P
Sbjct: 71 GPERSVDVTDVTKQKDCKMKLKEFVDYYYSTN---RKRVLNVTNLEFSDTR-MSSFVEPP 126
Query: 255 NAVNNNDLVDIVWNFGRTETDIERPKVTKYILMSVGNAYTDFHLDFAGTSVYYNVISGSK 314
+ V V+ W + + +PKVTKY L+ V ++YTDFH+D G S +Y+V+ G K
Sbjct: 127 DIVKKLSWVENYWP---DDALLAKPKVTKYCLICVKDSYTDFHIDSGGASAWYHVLKGEK 183
Query: 315 KFILFPPTDYNLKKYREWCDNDNQNDIFLGDQLEAGIAMELTEGNLFMIPCGYIHAVYTP 374
F L P N+ Y W N +++F DQ++ + +G IP G+I+A TP
Sbjct: 184 TFYLIRPASANISLYERWRSASNHSEMFFADQVDKCYKCIVKQGQTLFIPSGWIYATLTP 243
Query: 375 EDSFIVGGNFLTLRDITTQLNVVEIEHQTKVPKKFTFPQFESV---MGK 420
D G+FL + Q+ E+E + K+ FP FE+ MGK
Sbjct: 244 VDCLAFAGHFLHSLSVEMQMRAYEVERRLKLGSLTQFPNFETACWYMGK 292
>CE20788 [B] KOG1633 F-box protein JEMMA and related proteins with JmjC PHD
F-box and LRR domains
Length = 548
Score = 128 bits (322), Expect = 2e-29
Identities = 77/238 (32%), Positives = 127/238 (53%), Gaps = 10/238 (4%)
Query: 186 NVEYLTKIMGDDYPLDVMDVQTQMNEKWTLSQWNEYYSHTSPSDRDRIRNVISLEVSHVE 245
++E L +I+G DY +D +DV Q L + + +P +R + N + LE S
Sbjct: 169 DLEDLVRILGSDYAVDTIDVFNQETYLMKLDTIRKLFRE-NPENRTLLYNFLFLEFSDHP 227
Query: 246 SFKDGIRRPNAVNNNDLVDIVWNFGRTET---DIERPKVTKYILMSVGNAYTDFHLDFAG 302
K+ R P V + + +W+ +++ D RPK+ + ++ N+YTDFH+DF G
Sbjct: 228 ELKEMARPPRFVQDISMAKRLWSDVTSKSALSDDHRPKIEQICAAAMANSYTDFHVDFGG 287
Query: 303 TSVYYNVISGSKKFILFPPTDYNLKKYREWCDNDNQNDIFLGDQLEAGI-AMELTEGNLF 361
TSVY++V G K F + PT+ N Y+ + + I+LG L+ + + + EG
Sbjct: 288 TSVYFHVFKGEKIFYIAAPTEENFVMYQAH-ETSTDSSIWLGHTLKGALKRVVVKEGQTL 346
Query: 362 MIPCGYIHAVYTPEDSFIVGGNFLTLRDITTQLNVVEIEH----QTKVPKKFTFPQFE 415
+IP G+IHAV T DS GGNFL L ++ + VV++E+ + K + F++P FE
Sbjct: 347 LIPAGWIHAVLTTIDSLAFGGNFLHLGNLIMHMRVVDMENSIREEIKNEEGFSYPNFE 404
>CE29355 [B] KOG1633 F-box protein JEMMA and related proteins with JmjC PHD
F-box and LRR domains
Length = 487
Score = 125 bits (315), Expect = 1e-28
Identities = 96/309 (31%), Positives = 151/309 (48%), Gaps = 42/309 (13%)
Query: 186 NVEYLTKIMGDDYPLDVMDVQTQMNEKWTLSQWNEYYSHTSPSDRDRIRNVISLEVSHVE 245
+V+ + +++G + ++V+ VQ Q + K +L ++ +Y T R+ + NV+SLE S
Sbjct: 39 SVDDVLELVGGNRMIEVVQVQNQGSVKMSLQEFINFYK-TPQEKREVLYNVLSLEFSQTP 97
Query: 246 SFKDGIRRPNAVNNNDLVDIVW---------NFGRTETDIERP-----KVTKYILMSVGN 291
+D ++ P V D V W +F + P KV Y LMSV N
Sbjct: 98 -LEDLVKSPELVRQIDWVGNQWPDALRQRWISFNGRDKKFYNPHHTFPKVQNYCLMSVAN 156
Query: 292 AYTDFHLDFAGTSVYYNVISGSKKFILFPPTDYNLKKYREWCDNDNQNDIFLGDQLEAGI 351
YTDFH+DF+GTSV+Y+V+ G +FI NDN F G +E
Sbjct: 157 CYTDFHIDFSGTSVWYHVLKG--QFIKTV--------------NDNA---FFGKSVEKCH 197
Query: 352 AMELTEGNLFMIPCGYIHAVYTPEDSFIVGGNFLTLRDITTQLNVVEIEHQTKVPKKFTF 411
L G+ +IP G+IHAVYTP+DS + GGNFL + TQL V ++E++ + +KF
Sbjct: 198 VAILEPGDTMLIPSGWIHAVYTPDDSLVFGGNFLHSQSCKTQLRVYQVENKLNITRKFRL 257
Query: 412 PQFES----VMGKTCEWLLNSDHIQSISSED--IENLVKYLSSSNIKYKPINYQSKKELI 465
P E V+ + ++++ + ED + + ++ +K I Y S E
Sbjct: 258 PYNEELIFYVIADYVKQWTGREYVRPLRIEDAKYDYVGDKWKTAGGHHKKIEY-SDYETG 316
Query: 466 TELKNKIIK 474
EL N +IK
Sbjct: 317 VELTNDMIK 325
>CE29354 [B] KOG1633 F-box protein JEMMA and related proteins with JmjC PHD
F-box and LRR domains
Length = 1058
Score = 125 bits (315), Expect = 1e-28
Identities = 96/309 (31%), Positives = 151/309 (48%), Gaps = 42/309 (13%)
Query: 186 NVEYLTKIMGDDYPLDVMDVQTQMNEKWTLSQWNEYYSHTSPSDRDRIRNVISLEVSHVE 245
+V+ + +++G + ++V+ VQ Q + K +L ++ +Y T R+ + NV+SLE S
Sbjct: 39 SVDDVLELVGGNRMIEVVQVQNQGSVKMSLQEFINFYK-TPQEKREVLYNVLSLEFSQTP 97
Query: 246 SFKDGIRRPNAVNNNDLVDIVW---------NFGRTETDIERP-----KVTKYILMSVGN 291
+D ++ P V D V W +F + P KV Y LMSV N
Sbjct: 98 -LEDLVKSPELVRQIDWVGNQWPDALRQRWISFNGRDKKFYNPHHTFPKVQNYCLMSVAN 156
Query: 292 AYTDFHLDFAGTSVYYNVISGSKKFILFPPTDYNLKKYREWCDNDNQNDIFLGDQLEAGI 351
YTDFH+DF+GTSV+Y+V+ G +FI NDN F G +E
Sbjct: 157 CYTDFHIDFSGTSVWYHVLKG--QFIKTV--------------NDNA---FFGKSVEKCH 197
Query: 352 AMELTEGNLFMIPCGYIHAVYTPEDSFIVGGNFLTLRDITTQLNVVEIEHQTKVPKKFTF 411
L G+ +IP G+IHAVYTP+DS + GGNFL + TQL V ++E++ + +KF
Sbjct: 198 VAILEPGDTMLIPSGWIHAVYTPDDSLVFGGNFLHSQSCKTQLRVYQVENKLNITRKFRL 257
Query: 412 PQFES----VMGKTCEWLLNSDHIQSISSED--IENLVKYLSSSNIKYKPINYQSKKELI 465
P E V+ + ++++ + ED + + ++ +K I Y S E
Sbjct: 258 PYNEELIFYVIADYVKQWTGREYVRPLRIEDAKYDYVGDKWKTAGGHHKKIEY-SDYETG 316
Query: 466 TELKNKIIK 474
EL N +IK
Sbjct: 317 VELTNDMIK 325
>Hs20548284 [B] KOG1633 F-box protein JEMMA and related proteins with JmjC PHD
F-box and LRR domains
Length = 584
Score = 49.7 bits (117), Expect = 1e-05
Identities = 21/43 (48%), Positives = 30/43 (68%)
Query: 276 IERPKVTKYILMSVGNAYTDFHLDFAGTSVYYNVISGSKKFIL 318
+ +PKVTK L+ V ++YTDFH+D G S +Y+V+ G K F L
Sbjct: 125 LAKPKVTKSCLICVKDSYTDFHIDCGGASAWYHVLKGEKTFYL 167
Database: KOG eukaryal database 04/03
Posted date: Apr 14, 2003 1:07 PM
Number of letters in database: 30,389,216
Number of sequences in database: 60,738
Lambda K H
0.318 0.136 0.412
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 31,123,282
Number of Sequences: 60738
Number of extensions: 1404903
Number of successful extensions: 3584
Number of sequences better than 1.0e-05: 14
Number of HSP's better than 0.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 3540
Number of HSP's gapped (non-prelim): 18
length of query: 478
length of database: 30,389,216
effective HSP length: 110
effective length of query: 368
effective length of database: 23,708,036
effective search space: 8724557248
effective search space used: 8724557248
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)