LBMGE Genomapper

Genomapper BLAST psiBLAST Mulalbla Multalin Genes & Genomes BLAST (restricted) Genome Guts COG Guess INTERPROScan CDD search Pattern search Sequence Patterns COG Trees Genome Syntenizer

Sulfolobus solfataricus P2 >SSO0143 SSV1 integrase fragment homolog (orf D-335) MNPGSSPCEGSKKGVERCKMTLVAILRQYSADYAQEFYDYLLNERKIGNKTAKEYVSAVNRPYKETDKSQKAYRIFAKFL ESRGVISSEEMEKILRVIKVKRSNADLYIPTEEGIRKTLKLAKEYSENVYFVYRIALESGARLNEILKVLKKPEKDVCDS ADDSNGRIRSNGSADGGISLCYYPLSWIRGSKGSFYVFHFSPLRKVTIGEGAIAGFERRRDGAVAIKYVRKFVASKMAEL GIPLDVIDFIQGRKPTRVLTQHYISLFGIAKEHYRKYAEWLSKSGVLSDD

Supplementary options
Additional orf sequence data	See Genomic Environment
Search GenBank with PSI-Blast at NCBI	Search Complete Genomes DataBase with Blast at LBMGE
Search InterPro Database at LBMGE	Search CDD Database at LBMGE
Determine COG functional Category (microbial)	Determine COG functional Category (eukarial)
Go to S. solfataricus P2 Data Base

^__________ GenBank id: 15897098 Gene name: - COG: S COG4342 Uncharacterized protein conserved in archaea Taxon: 273057 Lineage: Archaea: TACK group: Crenarchaeota: Thermoprotei: Sulfolobales: Sulfolobaceae: Sulfolobus: Sulfolobus solfataricus: Sulfolobus solfataricus P2
^__________


SSO0143
hypothetical
1
attR
SSV1 integrase
Uncategorized
1
single function




04/22/01 00:00:00
terminal
status:suspect: LH L COG0582 DNA replication, recombination and repair Integrase

CROSS REFERENCES:
pI: 10,28
MW: 32954,55
GenBank: 13813275
SCOP superfamily: => 
SCOP assignment: 109-267 2.3e-04 DNA breaking-rejoining enzymes