LBMGE Genomapper

Genomapper BLAST psiBLAST Mulalbla Multalin Genes & Genomes BLAST (restricted) Genome Guts COG Guess INTERPROScan CDD search Pattern search Sequence Patterns COG Trees Genome Syntenizer

Sulfolobus solfataricus P2 >SSO0968 DNA topoisomerase VI subunit B MSAKEKFASLSPAEFFKRNPELAGFPNPARALYQTVRELIENSLDATDVHGILPNIKITIDLIDESRQIYKVNVVDNGIG IPPQEVPNAFGRVLYSSKYVNRQTRGMYGLGVKAAVLYSQMHQDKPIEIETSPVNSKRLYTFKLKIDINKNEPIIVERGS VENNTGFHGTSVAISIPGDWPKAKSRIYEYIKRTYIITPYAEFIFKDPEGNVTYYPRLTNKIPKPPQEVKPHPYGVDREE IKIMINNLKRDYTIKEFLMSEFQSIGDTTADKILELVGLRPNKKVKNLTEEEITRLVETFKKYEDFRSPSADSLSVIGED LIELGLKKIFNPDFTASITRKPKAYQGHPFIVEAGIAFGGSIPVGEEPIVLRYANKIPLIYDEKSDVIWKVVEELDWKRY GIESDQYQMVVMVHLCSTKIPYKSAGKESIAEVEDIEKEIKNALMEVARKLKLYLSEKRKEQEAKKKLLAYLKYVPEVSR SLAIFLASGNKELVPKYQGEIVEGLFKLISKKLDLINIEEYRKVYKVDSE

Supplementary options
Additional orf sequence data	See Genomic Environment
Search GenBank with PSI-Blast at NCBI	Search Complete Genomes DataBase with Blast at LBMGE
Search InterPro Database at LBMGE	Search CDD Database at LBMGE
Determine COG functional Category (microbial)	Determine COG functional Category (eukarial)
Go to S. solfataricus P2 Data Base

^__________ GenBank id: 15897847 Gene name: top6B COG: L COG1389 DNA topoisomerase VI, subunit B Taxon: 273057 Lineage: Archaea: TACK group: Crenarchaeota: Thermoprotei: Sulfolobales: Sulfolobaceae: Sulfolobus: Sulfolobus solfataricus: Sulfolobus solfataricus P2
^__________


SSO0968
hypothetical
1
top6B
DNA topoisomerase VI subunit B
Replication and Repair
1
single function
5.99.1.3
TopoVI
Nearly identical to confirmed S.shibatae TopoVI gene to confirmed S. shibatae

04/22/01 00:00:00
terminal
status:good L COG1389 DNA replication, recombination and repair DNA topoisomerase VI, subunit B

CROSS REFERENCES:
pI: 9,43
MW: 60577,41
GenBank: 13814150
SCOP superfamily: => 
SCOP assignment: 1-220 4.1e-32 ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase