LBMGE Genomapper

Genomapper BLAST psiBLAST Mulalbla Multalin Genes & Genomes BLAST (restricted) Genome Guts COG Guess INTERPROScan CDD search Pattern search Sequence Patterns COG Trees Genome Syntenizer

Sulfolobus solfataricus P2 >SSO0971 Signal recognition particle protein subunit SRP54 (srp54) MLENIRDAVRKFLTGSTPYEKAVDEFIKDLQKSLISSDVNVKLVFSLTAKIKERLNKEKPPSVLERKEWFISIVYDELSK LFGGDKEPNVNPTKLPFIIMLVGVQGSGKTTTAGKLAYFYKKRGYKVGLVAADVYRPAAYDQLLQLGNQIGVQVYGEPNN QNPIEIAKKGVDIFVKNKMDIIIVDTAGRHGYGEETKLLEEMKEMYDVLKPDDVILVIDASIGQKAYDLASRFHQASPIG SVIITKMDGTAKGGGALSAVVATGATIKFIGTGEKIDELETFNAKRFVSRILGMGDIESILEKVKGLEEYDKIQKKMEDV MEGKGKLTLRDVYAQIIALRKMGPLSKVLQHIPGLGIMLPTPSEDQLKIGEEKIRRWLAALNSMTYKELENPNIIDKSRM RRIAEGSGLEVEEVRELLEWYNNMNRLLKMVKRRRGNIDKLFGGKIG

Supplementary options
Additional orf sequence data	See Genomic Environment
Search GenBank with PSI-Blast at NCBI	Search Complete Genomes DataBase with Blast at LBMGE
Search InterPro Database at LBMGE	Search CDD Database at LBMGE
Determine COG functional Category (microbial)	Determine COG functional Category (eukarial)
Go to S. solfataricus P2 Data Base

^__________ GenBank id: 15897850 Gene name: srp54 COG: U COG0541 Signal recognition particle GTPase Taxon: 273057 Lineage: Archaea: TACK group: Crenarchaeota: Thermoprotei: Sulfolobales: Sulfolobaceae: Sulfolobus: Sulfolobus solfataricus: Sulfolobus solfataricus P2
^__________


SSO0971
hypothetical
1
srp54
Signal recognition particle protein subunit SRP54
Cellular Processes
1
single function



Intracellular transport 
04/22/01 00:00:00
terminal
status:good N COG0541 Cell motility and secretion Signal recognition particle GTPase Ffh

CROSS REFERENCES:
pI: 9,99
MW: 50046,94
GenBank: 13814155
SCOP superfamily: => 
SCOP assignment: 3-84 5.8e-17 Domain of the SRP/SRP receptor G-proteins
SCOP assignment: 96-295 2.4e-35 P-loop containing nucleotide triphosphate hydrolases
SCOP assignment: 324-433 3.7e-26 Signal peptide-binding domain