LBMGE Genomapper

Genomapper BLAST psiBLAST Mulalbla Multalin Genes & Genomes BLAST (restricted) Genome Guts COG Guess INTERPROScan CDD search Pattern search Sequence Patterns COG Trees Genome Syntenizer

Sulfolobus solfataricus P2 >SSO1078 ABC transporter, ATP binding subunit MSVIRLENVTKIYEGNVKTIALRDINLSIDEGEFISILGPSGSGKSTLLSILGILDRPSQGKVYIYEVDVTKLSDNEISK IRNEYIGFVFQNFNLIQRLSVLQNVELPLVARGIPKKKREEIAINSLKLVGLDGLINKKPSELSGGQQQRVAIARALAQN PKIILADEPTGNLDSSNAKIVMNIFKKINEEFKTTIAVVTHDREVASYTKRKIYIRDGKIVGEER

Supplementary options
Additional orf sequence data	See Genomic Environment
Search GenBank with PSI-Blast at NCBI	Search Complete Genomes DataBase with Blast at LBMGE
Search InterPro Database at LBMGE	Search CDD Database at LBMGE
Determine COG functional Category (microbial)	Determine COG functional Category (eukarial)
Go to S. solfataricus P2 Data Base

^__________ GenBank id: 15897945 Gene name: - COG: V COG1136 ABC-type antimicrobial peptide transport system, ATPase component Taxon: 273057 Lineage: Archaea: TACK group: Crenarchaeota: Thermoprotei: Sulfolobales: Sulfolobaceae: Sulfolobus: Sulfolobus solfataricus: Sulfolobus solfataricus P2
^__________


SSO1078
hypothetical
1

ABC transporter, ATP binding subunit
Transport
ATG
single function




04/22/01 00:00:00
terminal
status:check: MH R COG1136 General function prediction only ABC-type (unclassified) transport system, ATPase component

CROSS REFERENCES:
pI: 10,2
MW: 25063,79
GenBank: 13814268
SCOP superfamily: => 
SCOP assignment: 2-223 4.4e-66 P-loop containing nucleotide triphosphate hydrolases