LBMGE Genomapper

Genomapper BLAST psiBLAST Mulalbla Multalin Genes & Genomes BLAST (restricted) Genome Guts COG Guess INTERPROScan CDD search Pattern search Sequence Patterns COG Trees Genome Syntenizer

Sulfolobus solfataricus P2 >SSO1999 ATP-dependent RNA helicase homolog MKLRLRKHMRLVENMLSLADFYNDFITRHGFEERKGIEETLLNLENGHSVILKAPTGYGKTTLTMILANAVSSDIDLGSR VIHVLPYRAIVQDLYLKLKNYADRGVIYTKNIGAQDMDYQDSPFFMKKVNVTTLDTFILNLFKLPTVDFKLIFKNYGSHY EFPRALIYSSIVIFDEFHLLGEDGKSLGAGLAALEVLRDAGVPIVVTSATIDKGLERVLMNKLGKNVKVVNADDFKIDRK IYVNVLENDEISITEEKVKEGKRVLLVYNTRMGAIEAYKKLKGRGLSPILIHSKFSKKDRIDKVNKINEAKLVVSTQVIE AGIDTSFDVLITEASPSHNLIQRAGRVARYGKGGRGKLEGEVYIFPFSGKVYDEREVKETVERVRELKTIDENLLIERDY TEVIDSILAKDLSVIDNSVFVDSKKVKSIYEKICSITRNASIILGFPPNSNDVNDAIPLTEEEAIKIIESKGSSAFVGNG NVKLYNKKCLQLEMLKNDILGVRIQDYNSEIGGVY

Supplementary options
Additional orf sequence data	See Genomic Environment
Search GenBank with PSI-Blast at NCBI	Search Complete Genomes DataBase with Blast at LBMGE
Search InterPro Database at LBMGE	Search CDD Database at LBMGE
Determine COG functional Category (microbial)	Determine COG functional Category (eukarial)
Go to S. solfataricus P2 Data Base

^__________ GenBank id: 15898794 Gene name: - COG: R COG1203 Predicted helicases Taxon: 273057 Lineage: Archaea: TACK group: Crenarchaeota: Thermoprotei: Sulfolobales: Sulfolobaceae: Sulfolobus: Sulfolobus solfataricus: Sulfolobus solfataricus P2
^__________


SSO1999
hypothetical
1

ATP-dependent RNA helicase homolog
Transcription
1
single function



Helicases
04/22/01 00:00:00
terminal
status:good R COG1203 General function prediction only Predicted helicases

CROSS REFERENCES:
pI: 10,01
MW: 44178,8
GenBank: 13815279
SCOP superfamily: => 
SCOP assignment: 45-406 5.8e-17 P-loop containing nucleotide triphosphate hydrolases