LBMGE Genomapper

Genomapper BLAST psiBLAST Mulalbla Multalin Genes & Genomes BLAST (restricted) Genome Guts COG Guess INTERPROScan CDD search Pattern search Sequence Patterns COG Trees Genome Syntenizer

Sulfolobus solfataricus P2 >SSO2339 peptide chain release factor 1 MKALIKELKKWKAPATVLLSLYIPPGRPIPDVVNLLRQEYSIAQNIKLKRTRDAVLSAIGAAIDRLNKIPKIDGNGLVLF CGENFDTEDFKCFMFSPPDKVPLFFYRTDKEFHLEFLEDMVEDTAVYGLIIVERDEATIGLLKGARIEILEEIEGFVPGK HMMGGQSQRRIDRIIDEMYHNFLKEVGEKVNAYFMPFVQNGKMKGVLLGGPGYAKEDFYKEDYVDYRIKNLILQPLIDVS DQGEVGLREMIMKAEDLLKNQQYIEVEKLLEELKYHLAKDDGLIIYGKEQIKKAMEIGAIEAIVIHEDSTDKELEKLAQD AENYGVKVFVVGDEVPEAEWVKKTFNGIVGKLRYRLY

Supplementary options
Additional orf sequence data	See Genomic Environment
Search GenBank with PSI-Blast at NCBI	Search Complete Genomes DataBase with Blast at LBMGE
Search InterPro Database at LBMGE	Search CDD Database at LBMGE
Determine COG functional Category (microbial)	Determine COG functional Category (eukarial)
Go to S. solfataricus P2 Data Base

^__________ GenBank id: 15899097 Gene name: - COG: J COG1503 Peptide chain release factor 1 (eRF1) Taxon: 273057 Lineage: Archaea: TACK group: Crenarchaeota: Thermoprotei: Sulfolobales: Sulfolobaceae: Sulfolobus: Sulfolobus solfataricus: Sulfolobus solfataricus P2
^__________


SSO2339
hypothetical
1

Eukaryotic-type peptide chain release factor (subunit 1)
Translation
1
single function


Translation termination, in eukaryotes: subunit-1 of heterodimer

04/22/01 00:00:00
terminal
status:good J COG1503 Translation, ribosomal structure and biogenesis Peptide chain release factor eRF, subunit 1

CROSS REFERENCES:
pI: 5,08
MW: 40907,18
GenBank: 13815640
SCOP superfamily: => 
SCOP assignment: 127-259 5.9e-40 Middle domain of eukaryotic peptide chain release factor subunit 1, ERF1
SCOP assignment: 260-356 2.8e-17 eL30-like
SCOP assignment: 1-123 4.5e-35 N-terminal domain of eukaryotic peptide chain release factor subunit 1, ERF1