LBMGE Genomapper

Genomapper BLAST psiBLAST Mulalbla Multalin Genes & Genomes BLAST (restricted) Genome Guts COG Guess INTERPROScan CDD search Pattern search Sequence Patterns COG Trees Genome Syntenizer

Sulfolobus solfataricus P2 >SSO5410 Small nuclear riboprotein protein (snRNP-1) MQAKVENPLKSLRTAINRIVLVKLKDGSEYIGKLEQTDGTMNLVLRDCTEIREGTSEPVAKYGRVLIRGSNILFISVDYE TVMNSEK

Supplementary options
Additional orf sequence data	See Genomic Environment
Search GenBank with PSI-Blast at NCBI	Search Complete Genomes DataBase with Blast at LBMGE
Search InterPro Database at LBMGE	Search CDD Database at LBMGE
Determine COG functional Category (microbial)	Determine COG functional Category (eukarial)
Go to S. solfataricus P2 Data Base

^__________ GenBank id: 15897150 Gene name: snRNP-1 COG: K COG1958 Small nuclear ribonucleoprotein (snRNP) homolog Taxon: 273057 Lineage: Archaea: TACK group: Crenarchaeota: Thermoprotei: Sulfolobales: Sulfolobaceae: Sulfolobus: Sulfolobus solfataricus: Sulfolobus solfataricus P2
^__________


SSO5410
hypothetical
1
snRNP-1
Small nuclear riboprotein protein
Transcription
1
single function



RNA modification
04/22/01 00:00:00
terminal
status:good K COG1958 Transcription Small nuclear riboprotein (snRNP) homologs

CROSS REFERENCES:
pI: 8,4
MW: 9788,25
GenBank: 13813335
SCOP superfamily: => 
SCOP assignment: 7-78 7.4e-15 Sm motif of small nuclear ribonucleoproteins,  SNRNP