BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC10ZA10FM1.SCF screened BAC_end (951 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1657 942 0.0 >3x_Contig1657 Length = 14558 Score = 942 bits (475), Expect = 0.0 Identities = 570/595 (95%), Gaps = 5/595 (0%) Strand = Plus / Plus Query: 84 cactggatgctccatcaatgtatctcttgtcttaatcacttgtcttttcaacttcatgaa 143 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 13311 cactggatgctccatcaatgtatctcttgtcttaatcacttgtcttttcaacttcatgaa 13370 Query: 144 gtctttccaattcttacgctgttccttttctaagtctgccagcttctcttcgttaacagc 203 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 13371 gtctttccaattcttacgctgttccttttctaagtctgccagcttctcttcgttaacagc 13430 Query: 204 cacgtccacgtttgttattattcttagaccattctgtaatcatcacatctgcccattctt 263 ||||||||||| | || ||||||||||||||||||||||||||||||||||||||||| Sbjct: 13431 cacgtccacgtaggctag-attcttagaccattctgtaatcatcacatctgcccattctt 13489 Query: 264 caaacagctcgacgttctcttggcggagaacttcgacgtgatcgttcacttcgtctgcca 323 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 13490 caaacagctcgacgttctcttggcggagaacttcgacgtgatcgttcacttcgtctgcca 13549 Query: 324 attttcgtagatgagcgcgtatctcttgtgatagtgcatcgaattgtgaatgtgctgccg 383 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 13550 attttcgtagatgagcgcgtatctcttgtgatagtgcatcgaattgtgaatgtgctgccg 13609 Query: 384 agaaatattcacgcattaattctctggtcatgtacttaggtagctgggtattgttttggt 443 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 13610 agaaatattcacgcattaattctctggtcatgtacttaggtagctgggtattgttttggt 13669 Query: 444 cgaaccatatggttttgttggttttttggatccacactttcagtgcaattttacatccat 503 ||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||| Sbjct: 13670 cgaaccatatggttttgttgg-tttttggatccacactttcagtgcaa-tttacatccat 13727 Query: 504 gatggccttagtgattatttggaagttggtttgtgaagtgttactggttcttttcaatag 563 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 13728 gatggccttagtgattatttggaagttggtttgtgaagtgttactggctcttttcaatag 13787 Query: 564 atctgccaaagtagttttgaagggatctagtttctcctgagcttacttattgacatcatt 623 |||||||||||||| || | | ||||||||||||||||||| ||| ||||| |||| | Sbjct: 13788 atctgccaaagtaggttgaatgtgatctagtttctcctgagcgaactcattgatatca-t 13846 Query: 624 tttcgaaatcttttttagtgttttacagtttgctctcaatcgctacttttccagg 678 ||||||||||||| |||||||| |||||||| | ||||||| || ||||||||| Sbjct: 13847 tttcgaaatctttcatagtgtttgacagtttgttttcaatcgtta-ttttccagg 13900 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 8333 Number of Sequences: 1807 Number of extensions: 8333 Number of successful extensions: 39 Number of sequences better than 1.0e-20: 1 length of query: 951 length of database: 10,358,551 effective HSP length: 16 effective length of query: 935 effective length of database: 10,329,639 effective search space: 9658212465 effective search space used: 9658212465 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)