BLASTN 2.2.3 [May-13-2002]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FJ0AC10ZA10FM1.SCF screened BAC_end
         (951 letters)

Database: Klactis 3X assemblage 11/02 
           1807 sequences; 10,358,551 total letters

Searching....done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

3x_Contig1657                                                         942   0.0  

>3x_Contig1657 
          Length = 14558

 Score =  942 bits (475), Expect = 0.0
 Identities = 570/595 (95%), Gaps = 5/595 (0%)
 Strand = Plus / Plus

                                                                         
Query: 84    cactggatgctccatcaatgtatctcttgtcttaatcacttgtcttttcaacttcatgaa 143
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 13311 cactggatgctccatcaatgtatctcttgtcttaatcacttgtcttttcaacttcatgaa 13370

                                                                         
Query: 144   gtctttccaattcttacgctgttccttttctaagtctgccagcttctcttcgttaacagc 203
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 13371 gtctttccaattcttacgctgttccttttctaagtctgccagcttctcttcgttaacagc 13430

                                                                         
Query: 204   cacgtccacgtttgttattattcttagaccattctgtaatcatcacatctgcccattctt 263
             |||||||||||  | ||  |||||||||||||||||||||||||||||||||||||||||
Sbjct: 13431 cacgtccacgtaggctag-attcttagaccattctgtaatcatcacatctgcccattctt 13489

                                                                         
Query: 264   caaacagctcgacgttctcttggcggagaacttcgacgtgatcgttcacttcgtctgcca 323
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 13490 caaacagctcgacgttctcttggcggagaacttcgacgtgatcgttcacttcgtctgcca 13549

                                                                         
Query: 324   attttcgtagatgagcgcgtatctcttgtgatagtgcatcgaattgtgaatgtgctgccg 383
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 13550 attttcgtagatgagcgcgtatctcttgtgatagtgcatcgaattgtgaatgtgctgccg 13609

                                                                         
Query: 384   agaaatattcacgcattaattctctggtcatgtacttaggtagctgggtattgttttggt 443
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 13610 agaaatattcacgcattaattctctggtcatgtacttaggtagctgggtattgttttggt 13669

                                                                         
Query: 444   cgaaccatatggttttgttggttttttggatccacactttcagtgcaattttacatccat 503
             ||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||
Sbjct: 13670 cgaaccatatggttttgttgg-tttttggatccacactttcagtgcaa-tttacatccat 13727

                                                                         
Query: 504   gatggccttagtgattatttggaagttggtttgtgaagtgttactggttcttttcaatag 563
             ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 13728 gatggccttagtgattatttggaagttggtttgtgaagtgttactggctcttttcaatag 13787

                                                                         
Query: 564   atctgccaaagtagttttgaagggatctagtttctcctgagcttacttattgacatcatt 623
             |||||||||||||| ||  | | |||||||||||||||||||  ||| ||||| |||| |
Sbjct: 13788 atctgccaaagtaggttgaatgtgatctagtttctcctgagcgaactcattgatatca-t 13846

                                                                    
Query: 624   tttcgaaatcttttttagtgttttacagtttgctctcaatcgctacttttccagg 678
             |||||||||||||  |||||||| |||||||| | ||||||| || |||||||||
Sbjct: 13847 tttcgaaatctttcatagtgtttgacagtttgttttcaatcgtta-ttttccagg 13900


  Database: Klactis 3X assemblage 11/02
    Posted date:  Nov 27, 2002 12:23 PM
  Number of letters in database: 10,358,551
  Number of sequences in database:  1807
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 8333
Number of Sequences: 1807
Number of extensions: 8333
Number of successful extensions: 39
Number of sequences better than 1.0e-20: 1
length of query: 951
length of database: 10,358,551
effective HSP length: 16
effective length of query: 935
effective length of database: 10,329,639
effective search space: 9658212465
effective search space used: 9658212465
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)