BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC10ZA12RM1.SCF screened BAC_end (895 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig521 1281 0.0 >3x_Contig521 Length = 2327 Score = 1281 bits (646), Expect = 0.0 Identities = 720/738 (97%), Gaps = 5/738 (0%) Strand = Plus / Plus Query: 48 ttcgtcactttaataataatagtaacagcatgagcagtagccactgctattactatacct 107 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1303 ttcgtcactttaataataatagtaacagcatgagcagtagccactgctattactatacct 1362 Query: 108 agttttagtgatgattgagatttagcagcaggaagtatggatttgagaagaattcttatc 167 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1363 agttttagtgatgattgagatttagcagcaggaagtatggatttgagaagaattcttatc 1422 Query: 168 ataatgtttcgtggttttggggttcgcttcttttcttttgaatgattttttataatttgc 227 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 1423 ataatgtttcgtggttttggggttcgcttcttttcttttgaatgatgttttataatttgc 1482 Query: 228 gatcgagggcaagtcatctcgggacatgcctagttccattatgggagtcttgtggtatgc 287 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1483 gatcgagggcaagtcatctcgggacatgcctagttccattatgggagtcttgtggtatgc 1542 Query: 288 gaataactttcggtctgactattatagaaaagaatcctttcattacaacacattcattat 347 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1543 gaataactttcggtctgactattatagaaaagaatcctttcattacaacacattcattat 1602 Query: 348 aactaattcttctctttctttcacctcagcagaggtgaggagataattatcgtgtacttc 407 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1603 aactaattcttctctttctttcacctcagcagaggtgaggagataattatcgtgtacttc 1662 Query: 408 tgcacctagtcatgttccaattgtgatcatacttatatataccacatatttctcaggtat 467 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1663 tgcacctagtcatgttccaattgtgatcatacttatatataccacatatttctcaggtat 1722 Query: 468 ggaggataaagcgaaccataactatctttacgagatgaaaacagttgcctaacgttgatt 527 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1723 ggaggataaagcgaaccataactatctttacgagatgaaaacagttgcctaacgttgatt 1782 Query: 528 tcatatgaaaattataaaactaacaaaccccaagatctactctgatttcgataattatgg 587 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 1783 tcatatgaaaattataaaactaacaaacaccaagatctactctgatttcgataattatgg 1842 Query: 588 gtttcgctttgta-cgttaacagcgtcatgtatagtatttgtattcaccgtagctttctt 646 |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1843 ttttcgctttgtaccgttaacagcgtcatgtatagtatttgtattcaccgtagctttctt 1902 Query: 647 gtacc-ttcgctatgcttcgctgactgaaatgaaatatcatttcttaccgggtttggaag 705 ||||| |||||||||||||||||||||||||||||||||||||| || || |||| |||| Sbjct: 1903 gtacctttcgctatgcttcgctgactgaaatgaaatatcatttc-taacgtgttttgaag 1961 Query: 706 attcaattcccctttttttgagcgatagaattgaaacacctgcctgtacctttaaaggcc 765 ||||||||||| || || |||||||||||||||||||| ||| ||||||||| ||||| | Sbjct: 1962 attcaattcccattattatgagcgatagaattgaaaca-ctgtctgtaccttaaaagg-c 2019 Query: 766 aggatccaagtgcccctc 783 |||||| |||||| |||| Sbjct: 2020 aggatcaaagtgcacctc 2037 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 7154 Number of Sequences: 1807 Number of extensions: 7154 Number of successful extensions: 67 Number of sequences better than 1.0e-20: 1 length of query: 895 length of database: 10,358,551 effective HSP length: 16 effective length of query: 879 effective length of database: 10,329,639 effective search space: 9079752681 effective search space used: 9079752681 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)