BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC10ZB03RM1.SCF screened BAC_end (926 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1220 1116 0.0 >3x_Contig1220 Length = 4729 Score = 1116 bits (563), Expect = 0.0 Identities = 668/693 (96%), Gaps = 9/693 (1%) Strand = Plus / Minus Query: 50 tggtgtaccgtccgcattccaggtttcgaaatacctataattcaaatgggtggttggcgc 109 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4258 tggtgtaccgtccgcattccaggtttcgaaatacctataattcaaatgggtggttggcgc 4199 Query: 110 atgtggattaattggatgaataaccatagagagaccacaggcgaagaattttactcctgt 169 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4198 atgtggattaattggatgaataaccatagagagaccacaggcgaagaattttactcctgt 4139 Query: 170 tgcatctggttcaccagttgcaggatcaataggcagatgcaaatttttgtggtccgcttt 229 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4138 tgcatctggttcaccagttgcaggatcaataggcagatgcaaatttttgtggtccgcttt 4079 Query: 230 catagccttgatagcaggtggactcaagttcccatgaaccacactgacattaacaccacc 289 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4078 catagccttgatagcaggtggactcaagttcccatgaaccacactgacattaacaccacc 4019 Query: 290 tttctcaaacgtagtaccattctgcaacaccatcgagacaccgccaccaccgttgttgcc 349 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4018 tttctcaaacgtagtaccattctgcaacaccatcgagacaccgccaccaccgttgttgcc 3959 Query: 350 acgatcccaagaatcggcttgaaactttacagtatccaaagtttccagacccttggtaat 409 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3958 acgatcccaagaatcggcttgaaactttacagtatccaaagtttccagacccttggtaat 3899 Query: 410 ttcttgctgtttccggcgcactaaggcctccattctctctctaattggcacttgtgaatc 469 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3898 ttcttgctgtttccggcgcactaaggcctccattctctctctaattggcacttgtgaatc 3839 Query: 470 tgtcatcgcacaatgataatatttagaatgtgtgttaagatgaaccggtcgttgagtttc 529 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3838 tgtcatcgcacaatgataatatttagaatgtgtgttaagatgaaccggtcgttgagtttc 3779 Query: 530 tgtttgctttaccagacaagtatactggatgtaaag-tttatcaatgattctgcttgatt 588 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 3778 tgtttgctttaccagacaagtatactggatgtaaagttttatcaatgattctgcttgatt 3719 Query: 589 ggagagaaaa-ggcagtatagat-caatgc-tnttttctta-ttcagttggtgagtcgaa 644 |||||||||| |||||||||||| |||||| | | |||| | |||||||||||||||||| Sbjct: 3718 ggagagaaaagggcagtatagatccaatgcttctcttctcatttcagttggtgagtcgaa 3659 Query: 645 tggaat-atttactttcgttattttggcc--aaaaaaaaaatcc-aaaagcaagcggact 700 |||||| ||| |||||||||| | | | | ||||||||||||| |||||||||| |||| Sbjct: 3658 tggaataattcactttcgttaatatagtcaaaaaaaaaaaatccaaaaagcaagcagact 3599 Query: 701 ttagaattcaaacctggggattatttggttaaa 733 | | ||||| |||||| ||| |||||| |||| Sbjct: 3598 tcaagattcagacctggtgataatttggataaa 3566 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 8745 Number of Sequences: 1807 Number of extensions: 8745 Number of successful extensions: 44 Number of sequences better than 1.0e-20: 1 length of query: 926 length of database: 10,358,551 effective HSP length: 16 effective length of query: 910 effective length of database: 10,329,639 effective search space: 9399971490 effective search space used: 9399971490 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)