BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC10ZB07FM1.SCF screened BAC_end (903 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1301 1382 0.0 >3x_Contig1301 Length = 6951 Score = 1382 bits (697), Expect = 0.0 Identities = 787/810 (97%), Gaps = 6/810 (0%) Strand = Plus / Minus Query: 86 ttatccccgattgctccattgatattattggtgacagtttaagtcaataggattgtagtc 145 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1511 ttatccccgattgctccattgatattattggtgacagtttaagtcaataggattgtagtc 1452 Query: 146 ttgacatgtttggatactatgaggtcctcactaaacaacaatggtagcaaaaagcaacaa 205 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1451 ttgacatgtttggatactatgaggtcctcactaaacaacaatggtagcaaaaagcaacaa 1392 Query: 206 agtattaagacataagttgttgtgatatatatatatgatttaagaccttttattactgag 265 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1391 agtattaagacaaaagttgttgtgatatatatatatgatttaagaccttttattactgag 1332 Query: 266 tatctttaagaaggttttggctgtaggtgttgacactttagctgcatccttaacactatt 325 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1331 tatctttaagaaggttttggctgtaggtgttgacactttagctgcatccttaacactatt 1272 Query: 326 tttgttgaagtaacagtaacaaatgcattgtcattaaggactggtaatctggagtcctga 385 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1271 tttgttgaagtaacagtaacaaatgcattgtcattaaggactggtaatctggagtcctga 1212 Query: 386 tgtatcaaatagagggaagcattttcaatatataattcggaagtcgggcagtgcatcgtc 445 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1211 tgtatcaaatagagggaagcattttcaatatataattcggaagtcgggcagtgcatcgtc 1152 Query: 446 tctgatatttagaatggttgttacatttcagctgcaaatgctaatcttttcatgtatcat 505 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1151 tctgatatttagaatggttgttacatttcagctgcaaatgctaatcttttcatgtatcat 1092 Query: 506 ttgaaaccttttcattgtaagaagtctttcaaataagcaccaacagctcacaaatgctgc 565 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1091 ttgaaaccttttcattgtaagaagtctttcaaataagcaccaacagctcacaaatgctgc 1032 Query: 566 aaaaccttcatatcttttgctcaagcattttaaaagtcctatagtgtccccagttgtgat 625 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1031 aaaaccttcatatcttttgctcaagcattttaaaagtcctatagtgtccccagttgtgat 972 Query: 626 caagggtttttgttactttcagtaccagatgctaaagggac-ttgactangttttgacgc 684 |||||||||||||||||||||||||||||||||||| |||| ||||||| |||||||||| Sbjct: 971 caagggtttttgttactttcagtaccagatgctaaaaggactttgactaggttttgacgc 912 Query: 685 tttcttttancgtttga-gaatattatatatatcaataattgcttgctgaaatac-ttac 742 |||| |||| ||||||| |||||| |||||||||||||||||||||||||||| |||| Sbjct: 911 tttc-tttagcgtttgaggaatatataatatatcaataattgcttgctgaaatactttac 853 Query: 743 tggaatttggtattattatttgactatatattgcttttgaatagcatttaagaatacgat 802 ||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 852 tgg-atttggtattattatttgactatatatgctttttgaatagcatttaagaatacgat 794 Query: 803 tatgccantgtcatgcctaaatgaaattttccttccaattcgtgtccgttatattaaaac 862 |||||| |||||||| |||||||||||||||| | ||||||||||||||||| |||||| Sbjct: 793 aatgccagtgtcatgcttaaatgaaattttcctccaaattcgtgtccgttata-taaaac 735 Query: 863 gataaaccactttgtaatagaaaaattgta 892 ||||||||||| ||||||||||||| |||| Sbjct: 734 gataaaccactctgtaatagaaaaaatgta 705 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 9816 Number of Sequences: 1807 Number of extensions: 9816 Number of successful extensions: 64 Number of sequences better than 1.0e-20: 1 length of query: 903 length of database: 10,358,551 effective HSP length: 16 effective length of query: 887 effective length of database: 10,329,639 effective search space: 9162389793 effective search space used: 9162389793 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)